Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00979

Orthogroup ID

OG0007211

Physical Location & Seq

Genomic Coordinates Forward (+)

469 .. 4093

Gene Structure 3625 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G021300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGAACGCTTCAATTATCGACCCACTGCAAGGAGATTTCCCAGAAGTGATAGAGGAGTATTTGGAACATGGGGTTATGAAATGCATTGCCTTCAATCGCCGTGGTACTCTTCTTGCTGCTGGCTGCTCTGATGGTAATTGCATAATATGGGATTTTGAGACCAGGGGCATTGCTAAGGAGCTCCGTGATAAAGACTGTGTTGCTGCCATAACTAGTGTATGTTGGTCAAAATATGGTCATCGCGTTCTTGTGTCTGCAGCTGACAAATCGTTGACACTATGGGACGTTGTCAGTGGTGAGAAGATAACAAGAACGATGCTGCAACAAACCCCTCTACAAGCTCGGTTATATCCTGGTTCCTCTACTCCATCTCTCTGTCTGGCTTGCCCTCTCTCATCTGCTCCTATGATTGTTGACTTGAATACAGGAAGTGCAACTATGCTTCCAGTCTCCATTCCAGACTCTAACCCAGGATTTGCCCCTCCATCGCGGAATAAAATCTCTGATGGAACTCCCCCCTTTTCTCCTACTGCTGCTTGCTTTAATAAGAGAAATACTTCTAATAGATTAAAAAGTGTCCAAGTGCTTGCAATGGTTCCTACTTCTGGAGGTTCCGTGATTAAGAATATAGTATTCAGCAGGAATGGTCAGTATCTGCTTACAAATTCAAATGATAGAACAATAAGGATTTACGAGAACCTTCTTCCCTTGAAAGATGGACTCAAAGCCCTAAATGGCTTGACTGCTCTTGATGGACTAGATGATGCTGAGAAGTTGAAAGTTGTTGGATCAAAATGCTTAACACTATTCCGTGAGTTTCAAGATACCATCACAAAGATGCATTGGAAAGCACCTTGTTTCAGTGGTGATGGTGAGTGGGTAATTGGTGGTTCTGCAAGCAAAGGAGAACACAAGATTTACATATGGGACAGGGCTGGGCATCTTGTGAAAATTCTTGAAGGGCCAAAGGAAGCCTTGATCGATTTAGTGTGGCATCCTGTTCATCCCATTGTTGTCTCTGTTTCCCTGACTGGCTTGGTTTATATTTGGGCTAAAGATTACACTGAGAACTGGAGTGCATTTGCTCCTGATTTTAAGGAGCTCGAGGAAAATGAGGAGTACATAGAACGAGAAGACGAATTTGATCTGATACCTGAAACTGAAAAGGCCAAAGAATCTAATGTTAATGAAGATGATGAAGTTGATATCGTGACAGTGGACAAGGATTCAGCTTTTAGTGATTCAGATATGTCACAGGAAGAGCTATGCTTCTTGCCAGCAATTCCTTTGCCTGATGCTCCTGAGCAACAAGACAAGTGCTTAGAAAGTTCATCAAAGTTGGTGGAAAGTAATAATTCTGGCTCCCCTCTTTCAGAAGAGGGCAGACCTAATGGTCGTGCAATGAATCATGCATCCAGTCCGCTTGAAGAGGATCCTGGAGCAACACGCTTGAAAAGAAAACGGAAGCCTTCTGAAAAGTGGTTGGACTTGCAGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009987 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034708 GO:0034968 GO:0035064 GO:0035097 GO:0036211 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043627 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044665 GO:0044666 GO:0048188 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051276 GO:0051568 GO:0051716 GO:0061458 GO:0070013 GO:0071339 GO:0071704 GO:0071840 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04934 map04934

Pfam Domains

Protein Families

WD40

Protein Analysis

499

Amino Acids

55.05

Weight (kDa)

4.97

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_TEP1_2nd	PF25047	14 - 111	6.9e-07	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	25 - 105	1.1e-11	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	25 - 104	6.7e-10	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	25 - 102	4.6e-08	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	26 - 113	7.7e-12	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	26 - 104	2.3e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	26 - 111	4e-06	WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz	PF24807	29 - 104	1.7e-07	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	194 - 350	6.4e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21060
fragaria_vesca	FvH4_2g10510 FvH4_2g10510 FvH4_2g10510 FvH4_2g10510
malus_domestica	MD02G1259400.v1.1 MD07G1061200.v1.1
prunus_persica	Prupe.5G058900_v2.0.a1 Prupe.5G058900_v2.0.a1
pyrus_communis	pycom02g22080
rosa_chinensis	RchiOBHm_Chr6g0268021
rosa_laevigata	RLG00000013939
rosa_multiflora	Rmu_sc0001839.1_g000031 Rmu_sc0003304.1_g000001 Rmu_sc0003304.1_g000039 Rmu_sc0004529.1_g000038
rosa_roxburghii	Rroxscaffold_7G00200120 Rroxscaffold_7G00200140
rosa_rugosa	Rorug06G0038800
rosa_samantha	Rh6AG158100 Rh6BG162100 Rh6CG156300 Rh6DG147700
rosa_wichuraiana	Rw0G021300 Rw6G013760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1392
AccII	CGCG	2 cut(s)	243, 490
AciI	CCGC	2 cut(s)	490, 1421
AclWI	GGATC	3 cut(s)	796, 1427, 1440
AcsI	RAATTY	3 cut(s)	664, 951, 1139
AfaI	GTAC	2 cut(s)	106, 1121
AfiI	CCNNNNNNNGG	2 cut(s)	29, 605
AhlI	ACTAGT	1 cut(s)	212
AjnI	CCWGG	4 cut(s)	161, 352, 469, 1435
AluBI	AGCT	7 cut(s)	181, 260, 341, 1102, 1232, 1264, 1495
AluI	AGCT	7 cut(s)	181, 260, 341, 1102, 1232, 1264, 1495
Alw21I	GWGCWC	2 cut(s)	183, 1104
Alw26I	GTCTC	3 cut(s)	152, 454, 1021
AlwI	GGATC	3 cut(s)	796, 1427, 1440
AlwNI	CAGNNNCTG	1 cut(s)	655
Ama87I	CYCGRG	1 cut(s)	1103
AoxI	GGCC	2 cut(s)	962, 1167
ApeKI	GCWGC	7 cut(s)	116, 123, 203, 257, 319, 533, 1492
ApoI	RAATTY	3 cut(s)	664, 951, 1139
Asp700I	GAANNNNTTC	1 cut(s)	556
AspS9I	GGNCC	1 cut(s)	962
AsuHPI	GGTGA	3 cut(s)	308, 878, 884
AvaI	CYCGRG	1 cut(s)	1103
BamHI	GGATCC	1 cut(s)	1432
BanII	GRGCYC	2 cut(s)	183, 1104
BbsI	GAAGAC	1 cut(s)	1140
Bbv12I	GWGCWC	2 cut(s)	183, 1104
BbvI	GCAGC	6 cut(s)	103, 110, 190, 269, 306, 520
BccI	CCATC	8 cut(s)	125, 376, 493, 500, 710, 746, 836, 863
BceAI	ACGGC	1 cut(s)	84
BciT130I	CCWGG	4 cut(s)	163, 354, 471, 1437
BcoDI	GTCTC	3 cut(s)	152, 454, 1021
BcuI	ACTAGT	1 cut(s)	212
BfaI	CTAG	2 cut(s)	213, 758
BfmI	CTRYAG	1 cut(s)	255
BisI	GCNGC	7 cut(s)	117, 124, 204, 258, 320, 534, 1493
BlsI	GCNGC	7 cut(s)	118, 125, 205, 259, 321, 535, 1494
Bme1390I	CCNGG	4 cut(s)	163, 354, 471, 1437
BmeT110I	CYCGRG	1 cut(s)	1103
BmgT120I	GGNCC	1 cut(s)	962
BmiI	GGNNCC	5 cut(s)	358, 597, 613, 1363, 1434
BmrFI	CCNGG	4 cut(s)	163, 354, 471, 1437
BmsI	GCATC	7 cut(s)	306, 754, 828, 949, 1003, 1285, 1421
BpiI	GAAGAC	1 cut(s)	1140
BpmI	CTGGAG	3 cut(s)	627, 1093, 1458
Bpu10I	CCTNAGC	2 cut(s)	174, 1302
Bsa29I	ATCGAT	1 cut(s)	981
BsaI	GGTCTC	1 cut(s)	152
BsaJI	CCNNGG	3 cut(s)	100, 162, 469
BsaXI	ACNNNNNCTCC	2 cut(s)	600, 630
Bsc4I	CCNNNNNNNGG	2 cut(s)	29, 605
Bse1I	ACTGG	4 cut(s)	446, 1036, 1076, 1416
Bse3DI	GCAATG	4 cut(s)	84, 168, 597, 1407
BseBI	CCWGG	4 cut(s)	163, 354, 471, 1437
BseCI	ATCGAT	1 cut(s)	981
BseDI	CCNNGG	3 cut(s)	100, 162, 469
BseGI	GGATG	3 cut(s)	994, 1003, 1412
BseLI	CCNNNNNNNGG	2 cut(s)	29, 605
BseMI	GCAATG	4 cut(s)	84, 168, 597, 1407
BseMII	CTCAG	3 cut(s)	759, 1056, 1293
BseNI	ACTGG	4 cut(s)	446, 1036, 1076, 1416
BseRI	GAGGAG	2 cut(s)	68, 1130
BseXI	GCAGC	6 cut(s)	103, 110, 190, 269, 306, 520
BseYI	CCCAGC	1 cut(s)	935
Bsh1236I	CGCG	2 cut(s)	243, 490
BshFI	GGCC	2 cut(s)	964, 1169
BshVI	ATCGAT	1 cut(s)	981
BsiHKAI	GWGCWC	2 cut(s)	183, 1104
BsiHKCI	CYCGRG	1 cut(s)	1103
BslFI	GGGAC	2 cut(s)	296, 941
BslI	CCNNNNNNNGG	2 cut(s)	29, 605
BsmAI	GTCTC	3 cut(s)	152, 454, 1021
BsmFI	GGGAC	2 cut(s)	296, 941
BsnI	GGCC	2 cut(s)	964, 1169
Bso31I	GGTCTC	1 cut(s)	152
BsoBI	CYCGRG	1 cut(s)	1103
Bsp1286I	GDGCHC	2 cut(s)	183, 1104
Bsp143I	GATC	4 cut(s)	788, 978, 1144, 1432
BspACI	CCGC	2 cut(s)	490, 1421
BspANI	GGCC	2 cut(s)	964, 1169
BspCNI	CTCAG	3 cut(s)	760, 1057, 1294
BspDI	ATCGAT	1 cut(s)	981
BspFNI	CGCG	2 cut(s)	243, 490
BspLI	GGNNCC	5 cut(s)	358, 597, 613, 1363, 1434
BspMAI	CTGCAG	1 cut(s)	259
BspPI	GGATC	3 cut(s)	796, 1427, 1440
BspQI	GCTCTTC	1 cut(s)	1254
BspTNI	GGTCTC	1 cut(s)	152
BsrDI	GCAATG	4 cut(s)	84, 168, 597, 1407
BsrI	ACTGG	4 cut(s)	446, 1036, 1076, 1416
BssECI	CCNNGG	3 cut(s)	100, 162, 469
BssMI	GATC	4 cut(s)	788, 978, 1144, 1432
Bst2UI	CCWGG	4 cut(s)	163, 354, 471, 1437
Bst4CI	ACNGT	2 cut(s)	197, 1216
Bst6I	CTCTTC	4 cut(s)	114, 1254, 1371, 1422
BstC8I	GCNNGC	6 cut(s)	121, 385, 538, 588, 898, 1278
BstDEI	CTNAG	5 cut(s)	174, 768, 1065, 1302, 1321
BstDSI	CCRYGG	1 cut(s)	100
BstF5I	GGATG	3 cut(s)	994, 1003, 1412
BstFNI	CGCG	2 cut(s)	243, 490
BstKTI	GATC	4 cut(s)	791, 981, 1147, 1435
BstMAI	GTCTC	3 cut(s)	152, 454, 1021
BstMBI	GATC	4 cut(s)	788, 978, 1144, 1432
BstNI	CCWGG	4 cut(s)	163, 354, 471, 1437
BstSCI	CCNGG	4 cut(s)	161, 352, 469, 1435
BstSFI	CTRYAG	1 cut(s)	255
BstUI	CGCG	2 cut(s)	243, 490
BstV1I	GCAGC	6 cut(s)	103, 110, 190, 269, 306, 520
BstV2I	GAAGAC	1 cut(s)	1140
BstX2I	RGATCY	1 cut(s)	1432
BstYI	RGATCY	1 cut(s)	1432
Bsu15I	ATCGAT	1 cut(s)	981
BsuRI	GGCC	2 cut(s)	964, 1169
BsuTUI	ATCGAT	1 cut(s)	981
BtgI	CCRYGG	1 cut(s)	100
BtgZI	GCGATG	2 cut(s)	224, 471
BtsCI	GGATG	3 cut(s)	994, 1003, 1412
BtsI	GCAGTG	1 cut(s)	23
BtsIMutI	CAGTG	5 cut(s)	23, 298, 868, 1062, 1221
Cac8I	GCNNGC	6 cut(s)	121, 385, 538, 588, 898, 1278
CaiI	CAGNNNCTG	1 cut(s)	655
Cfr13I	GGNCC	1 cut(s)	962
ClaI	ATCGAT	1 cut(s)	981
Csp6I	GTAC	2 cut(s)	105, 1120
CspCI	CAANNNNNGTGG	4 cut(s)	82, 117, 1323, 1358
CviAII	CATG	2 cut(s)	68, 1409
CviQI	GTAC	2 cut(s)	105, 1120
DdeI	CTNAG	5 cut(s)	174, 768, 1065, 1302, 1321
DpnI	GATC	4 cut(s)	790, 980, 1146, 1434
DpnII	GATC	4 cut(s)	788, 978, 1144, 1432
DrdI	GACNNNNNNGTC	1 cut(s)	1392
DseDI	GACNNNNNNGTC	1 cut(s)	1392
Eam1104I	CTCTTC	4 cut(s)	114, 1254, 1371, 1422
EarI	CTCTTC	4 cut(s)	114, 1254, 1371, 1422
Ecl136II	GAGCTC	2 cut(s)	181, 1102
Eco24I	GRGCYC	2 cut(s)	183, 1104
Eco31I	GGTCTC	1 cut(s)	152
Eco32I	GATATC	1 cut(s)	1207
Eco53kI	GAGCTC	2 cut(s)	181, 1102
Eco88I	CYCGRG	1 cut(s)	1103
EcoICRI	GAGCTC	2 cut(s)	181, 1102
EcoRII	CCWGG	4 cut(s)	161, 352, 469, 1435
EcoRV	GATATC	1 cut(s)	1207
EcoT22I	ATGCAT	3 cut(s)	86, 843, 1414
EcoT38I	GRGCYC	2 cut(s)	183, 1104
FaeI	CATG	2 cut(s)	71, 1412
FalI	AAGNNNNNCTT	2 cut(s)	959, 991
FaqI	GGGAC	2 cut(s)	296, 941
FatI	CATG	2 cut(s)	67, 1408
FauNDI	CATATG	1 cut(s)	923
Fnu4HI	GCNGC	7 cut(s)	117, 124, 204, 258, 320, 534, 1493
FokI	GGATG	3 cut(s)	981, 990, 1399
FriOI	GRGCYC	2 cut(s)	183, 1104
Fsp4HI	GCNGC	7 cut(s)	117, 124, 204, 258, 320, 534, 1493
FspBI	CTAG	2 cut(s)	213, 758
GluI	GCNGC	7 cut(s)	117, 124, 204, 258, 320, 534, 1493
GsaI	CCCAGC	1 cut(s)	939
GsuI	CTGGAG	3 cut(s)	627, 1093, 1458
HaeIII	GGCC	2 cut(s)	964, 1169
Hin1II	CATG	2 cut(s)	71, 1412
HincII	GTYRAC	2 cut(s)	273, 415
HindII	GTYRAC	2 cut(s)	273, 415
HinfI	GANTC	6 cut(s)	461, 720, 1175, 1226, 1241, 1405
HphI	GGTGA	3 cut(s)	308, 878, 884
Hpy166II	GTNNAC	3 cut(s)	273, 415, 1219
Hpy188I	TCNGA	6 cut(s)	130, 505, 1149, 1246, 1375, 1474
Hpy188III	TCNNGA	8 cut(s)	458, 606, 749, 821, 956, 1088, 1210, 1301
Hpy8I	GTNNAC	3 cut(s)	273, 415, 1219
HpyAV	CCTTC	4 cut(s)	100, 710, 953, 1479
HpyCH4III	ACNGT	2 cut(s)	197, 1216
HpyCH4IV	ACGT	1 cut(s)	285
HpyF3I	CTNAG	5 cut(s)	174, 768, 1065, 1302, 1321
HpySE526I	ACGT	1 cut(s)	285
Hsp92II	CATG	2 cut(s)	71, 1412
Kzo9I	GATC	4 cut(s)	788, 978, 1144, 1432
LguI	GCTCTTC	1 cut(s)	1254
LmnI	GCTCC	8 cut(s)	178, 186, 406, 1090, 1099, 1303, 1367, 1439
Lsp1109I	GCAGC	6 cut(s)	103, 110, 190, 269, 306, 520
LweI	GCATC	7 cut(s)	306, 754, 828, 949, 1003, 1285, 1421
MaeI	CTAG	2 cut(s)	213, 758
MaeII	ACGT	1 cut(s)	285
MaeIII	GTNAC	2 cut(s)	1210, 1251
MalI	GATC	4 cut(s)	790, 980, 1146, 1434
MboI	GATC	4 cut(s)	788, 978, 1144, 1432
MboII	GAAGA	8 cut(s)	101, 313, 695, 1145, 1202, 1271, 1388, 1439
MflI	RGATCY	1 cut(s)	1432
MhlI	GDGCHC	2 cut(s)	183, 1104
MluCI	AATT	8 cut(s)	12, 136, 664, 882, 951, 1139, 1281, 1354
MlyI	GAGTC	2 cut(s)	455, 714
MmeI	TCCRAC	2 cut(s)	766, 1464
Mph1103I	ATGCAT	3 cut(s)	86, 843, 1414
MroXI	GAANNNNTTC	1 cut(s)	556
MseI	TTAA	6 cut(s)	543, 569, 621, 800, 1095, 1185
MslI	CAYNNNNRTG	1 cut(s)	836
MspA1I	CMGCKG	1 cut(s)	260
MspR9I	CCNGG	4 cut(s)	163, 354, 471, 1437
MvaI	CCWGG	4 cut(s)	163, 354, 471, 1437
MvnI	CGCG	2 cut(s)	243, 490
NdeI	CATATG	1 cut(s)	923
NdeII	GATC	4 cut(s)	788, 978, 1144, 1432
NlaIII	CATG	2 cut(s)	71, 1412
NlaIV	GGNNCC	5 cut(s)	358, 597, 613, 1363, 1434
NmuCI	GTSAC	2 cut(s)	1210, 1251
NsiI	ATGCAT	3 cut(s)	86, 843, 1414
PaeR7I	CTCGAG	1 cut(s)	1103
PciSI	GCTCTTC	1 cut(s)	1254
PdmI	GAANNNNTTC	1 cut(s)	556
PfeI	GAWTC	4 cut(s)	1175, 1226, 1241, 1405
PflFI	GACNNNGTC	1 cut(s)	287
PfoI	TCCNGGA	1 cut(s)	1435
PkrI	GCNGC	7 cut(s)	118, 125, 205, 259, 321, 535, 1494
PleI	GAGTC	2 cut(s)	455, 714
PpsI	GAGTC	2 cut(s)	455, 714
Psp124BI	GAGCTC	2 cut(s)	183, 1104
Psp6I	CCWGG	4 cut(s)	161, 352, 469, 1435
PspFI	CCCAGC	1 cut(s)	935
PspGI	CCWGG	4 cut(s)	161, 352, 469, 1435
PspN4I	GGNNCC	5 cut(s)	358, 597, 613, 1363, 1434
PspPI	GGNCC	1 cut(s)	962
PspXI	VCTCGAGB	1 cut(s)	1103
PstI	CTGCAG	1 cut(s)	259
PstNI	CAGNNNCTG	1 cut(s)	655
PsuI	RGATCY	1 cut(s)	1432
PsyI	GACNNNGTC	1 cut(s)	287
PvuII	CAGCTG	1 cut(s)	260
RsaI	GTAC	2 cut(s)	106, 1121
RsaNI	GTAC	2 cut(s)	105, 1120
RseI	CAYNNNNRTG	1 cut(s)	836
SacI	GAGCTC	2 cut(s)	183, 1104
SapI	GCTCTTC	1 cut(s)	1254
SaqAI	TTAA	6 cut(s)	543, 569, 621, 800, 1095, 1185
SatI	GCNGC	7 cut(s)	117, 124, 204, 258, 320, 534, 1493
Sau3AI	GATC	4 cut(s)	788, 978, 1144, 1432
Sau96I	GGNCC	1 cut(s)	962
SchI	GAGTC	2 cut(s)	455, 714
ScrFI	CCNGG	4 cut(s)	163, 354, 471, 1437
SduI	GDGCHC	2 cut(s)	183, 1104
SfaNI	GCATC	7 cut(s)	306, 754, 828, 949, 1003, 1285, 1421
SfcI	CTRYAG	1 cut(s)	255
Sfr274I	CTCGAG	1 cut(s)	1103
SlaI	CTCGAG	1 cut(s)	1103
SmiMI	CAYNNNNRTG	1 cut(s)	836
SmlI	CTYRAG	1 cut(s)	1103
SmoI	CTYRAG	1 cut(s)	1103
SpeI	ACTAGT	1 cut(s)	212
Sse9I	AATT	8 cut(s)	12, 136, 664, 882, 951, 1139, 1281, 1354
SsiI	CCGC	2 cut(s)	490, 1421
SspMI	CTAG	2 cut(s)	213, 758
SstI	GAGCTC	2 cut(s)	183, 1104
StyD4I	CCNGG	4 cut(s)	161, 352, 469, 1435
TaaI	ACNGT	2 cut(s)	197, 1216
TaiI	ACGT	1 cut(s)	288
TaqI	TCGA	3 cut(s)	18, 981, 1104
TasI	AATT	8 cut(s)	12, 136, 664, 882, 951, 1139, 1281, 1354
TatI	WGTACW	1 cut(s)	1119
TfiI	GAWTC	4 cut(s)	1175, 1226, 1241, 1405
Tru1I	TTAA	6 cut(s)	543, 569, 621, 800, 1095, 1185
Tru9I	TTAA	6 cut(s)	543, 569, 621, 800, 1095, 1185
TscAI	CASTG	5 cut(s)	30, 298, 868, 1069, 1221
TseFI	GTSAC	2 cut(s)	1210, 1251
TseI	GCWGC	7 cut(s)	116, 123, 203, 257, 319, 533, 1492
Tsp45I	GTSAC	2 cut(s)	1210, 1251
TspDTI	ATGAA	7 cut(s)	17, 92, 992, 1203, 1212, 1320, 1418
TspGWI	ACGGA	4 cut(s)	173, 604, 800, 1477
TspRI	CASTG	5 cut(s)	30, 298, 868, 1069, 1221
Tth111I	GACNNNGTC	1 cut(s)	287
XapI	RAATTY	3 cut(s)	664, 951, 1139
XhoI	CTCGAG	1 cut(s)	1103
XmnI	GAANNNNTTC	1 cut(s)	556
XspI	CTAG	2 cut(s)	213, 758
Zsp2I	ATGCAT	3 cut(s)	86, 843, 1414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.