Rroxscaffold_7G00201180

RNA recognition motif 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0011943
Physical Location & Seq
Reverse (-)
48696498 .. 48700208
3711 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00201180.1

Sequence Viewer

Length: 1383 bp
ATGATCCATGGCAAAAACCGCACCTTCGACGCCGGTTTGGTGGCCGGAATCGCCGGAAATCGACGAAACCTCCGTTCAGCTACAGTAATCTTCGTGGCTCAATTCCGAGCTCCACCGGCCGAGCCACCGCAAAACACCACCATAGGCGTGACAAGGAGGAGAAGGCGAGCCACCGGTGCCCGCATTCCGTCATGGGTCGGCCGGAGAAGGGAGAAATCGGAGGAAGAAGAAATCGGACCGAAGAGGAAGAAAGGGTCGGGGAGAGGAGAGAGAAAAGCCGCCATGGCTTCTGCCAAAGGTTTGAACCCGTTTGCCGCTGAGTTCGTCAAACCTCAAAACTCGAGTTTCTCAAAAAAAGACTATTCACCGCCCACCCCGCTCAACCCTTATGCCTCATCCTTTTACCGTTTCTCAAATGTTCTACCGGCACGCACAGGCTTCCCAAGCCCCATCACCTACTCTCTCCCCTTCCCCACCGATTTTCAATACCCAACTCATTTTGAGCACCATGTGCTTCCGGCAATCCAGTCGGTTCATCAGACTGTGTCTGATCAGCCAGAGCTGGTTGAAGTGCAGCAACCAGCTCATGACCTTGTTGCGCAGGAAGCTAACCAAAAATTTGTGCCTCCAAAAGTTCCGAGGATTCGTGGCTCCAAAGGAAGGTATAGGAGGTATAGCCGATTCTTTGATCAGCAAATCGGAAGAAGAAGCAGTACTAGTACAGAGAAGCAGGAGGGGAAGCCTGCTTTGAAGTCGACTGATGAGAAGAAGCTACCAAAGAAATTTATTGATTACAATTGGAGTGTGCCCAGGAGGATGGTGAAGAGTTTCTCCAACGTGCTACCGGTGAGAAAAGACGGTGACGGCACCACCGTCATGATTAGAAACATACCCAATAAGTACTCTCGTGATCTGTTGATGACTTTTCTGGACAAGCACTGTGCGAATGAGAATCGGAAATCTGACGGAGGAGAAGAATCGGAATCGGCCTTTGATTTCTTGTATCTGCCTATTGATTTTTGGACTGGGATGAACAAGGGCTATGCATTTGTAAACTTTACAAAACCAAACGCTGTGTGGAAGTTTTACTTGGCCGCTCATAGCCAGACATGGGATTCGTTCCACTCCAACAAGATTCGAGAAATCGCCTACGCTCGAATCCAGGGGAAGAAGGACTTGGTTCAACATTTTGAGACAATGAGGTTTCCTTGTGAGTCGGAGGAAGTGCTGCCTGTGTGTTTCAGTCCACCGCGGAACGGATCAGAGAAGTTGGTGGAGAGGAGATACGTTGGGAAGCTTGAAGGATGGGAAGGGATTGGATTGAAGCGACAGGGTGCAGGAACTTGGAGGAAGGTGAAGGAAGGAAGCTCAGCTAGGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_2

Protein Analysis

460

Amino Acids

52.34

Weight (kDa)

10.09

Isoelectric Point (pI)

55.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_2 PF04059 290 - 397 1.3e-26 RNA recognition motif 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011943)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07930 AT5G07930 AT5G07930
fragaria_vesca FvH4_2g10100 FvH4_2g10100
malus_domestica MD10G1065500.v1.1
prunus_persica Prupe.8G087500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0267061
rosa_laevigata RLG00000014045
rosa_multiflora Rmu_co8325855.1_g000001 Rmu_co8394061.1_g000001 Rmu_sc0013804.1_g000004
rosa_roxburghii Rroxscaffold_7G00201180
rosa_rugosa Rorug06G0028800
rosa_samantha Rh6AG150300 Rh6BG151200 Rh6CG146600 Rh6DG135300
rosa_wichuraiana Rw6G013030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 600
AccB1I GGYRCC 2 cut(s) 176, 866
AccBSI CCGCTC 2 cut(s) 379, 1097
AccI GTMKAC 1 cut(s) 755
AccII CGCG 1 cut(s) 1252
AclWI GGATC 1 cut(s) 1267
AcoI YGGCCR 4 cut(s) 42, 117, 199, 1092
AcsI RAATTY 2 cut(s) 617, 782
AcyI GRCGYC 1 cut(s) 30
AdeI CACNNNGTG 1 cut(s) 511
AfaI GTAC 3 cut(s) 715, 721, 902
AfiI CCNNNNNNNGG 4 cut(s) 208, 660, 1111, 1256
AgeI ACCGGT 2 cut(s) 173, 844
AgsI TTSAA 7 cut(s) 304, 485, 569, 751, 1184, 1301, 1324
AhlI ACTAGT 1 cut(s) 716
AjnI CCWGG 2 cut(s) 809, 1161
AjuI GAANNNNNNNTTGG 4 cut(s) 1073, 1105, 1160, 1192
AluBI AGCT 9 cut(s) 80, 110, 562, 584, 608, 772, 1297, 1368, 1373
AluI AGCT 9 cut(s) 80, 110, 562, 584, 608, 772, 1297, 1368, 1373
Alw21I GWGCWC 2 cut(s) 112, 507
Alw26I GTCTC 1 cut(s) 1187
AlwI GGATC 1 cut(s) 1267
Ama87I CYCGRG 1 cut(s) 340
AoxI GGCC 5 cut(s) 42, 117, 199, 987, 1092
ApeKI GCWGC 2 cut(s) 574, 1228
ApoI RAATTY 2 cut(s) 617, 782
ArsI GACNNNNNNTTYG 2 cut(s) 1099, 1131
AsiGI ACCGGT 2 cut(s) 173, 844
Asp700I GAANNNNTTC 1 cut(s) 827
AspLEI GCGC 1 cut(s) 601
AspS9I GGNCC 1 cut(s) 236
AsuHPI GGTGA 6 cut(s) 357, 445, 832, 859, 872, 1366
AvaI CYCGRG 1 cut(s) 340
AvaII GGWCC 1 cut(s) 236
BaeGI GKGCMC 2 cut(s) 181, 810
BanI GGYRCC 2 cut(s) 176, 866
BanII GRGCYC 1 cut(s) 112
BarI GAAGNNNNNNTAC 2 cut(s) 697, 729
BauI CACGAG 1 cut(s) 906
Bbv12I GWGCWC 2 cut(s) 112, 507
BbvI GCAGC 2 cut(s) 586, 1215
BccI CCATC 3 cut(s) 458, 811, 1299
BceAI ACGGC 1 cut(s) 880
BcgI CGANNNNNNTGC 2 cut(s) 510, 544
BciT130I CCWGG 2 cut(s) 811, 1163
BclI TGATCA 2 cut(s) 550, 688
BcoDI GTCTC 1 cut(s) 1187
BcuI ACTAGT 1 cut(s) 716
BfaI CTAG 2 cut(s) 717, 1374
BfmI CTRYAG 1 cut(s) 81
BglI GCCNNNNNGGC 1 cut(s) 284
BisI GCNGC 5 cut(s) 279, 315, 575, 1095, 1229
BlpI GCTNAGC 1 cut(s) 1369
BlsI GCNGC 5 cut(s) 280, 316, 576, 1096, 1230
BmcAI AGTACT 2 cut(s) 715, 902
Bme1390I CCNGG 2 cut(s) 811, 1163
Bme18I GGWCC 1 cut(s) 236
BmeT110I CYCGRG 1 cut(s) 340
BmgT120I GGNCC 1 cut(s) 236
BmiI GGNNCC 3 cut(s) 178, 652, 868
BmrFI CCNGG 2 cut(s) 811, 1163
BmrI ACTGGG 1 cut(s) 1035
BmuI ACTGGG 1 cut(s) 1035
Bpu1102I GCTNAGC 1 cut(s) 1369
BsaHI GRCGYC 1 cut(s) 30
BsaJI CCNNGG 6 cut(s) 7, 282, 638, 809, 1162, 1250
BsaWI WCCGGW 2 cut(s) 173, 844
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bsc4I CCNNNNNNNGG 4 cut(s) 208, 660, 1111, 1256
Bse118I RCCGGY 5 cut(s) 32, 115, 173, 424, 844
Bse1I ACTGG 2 cut(s) 526, 1030
BseBI CCWGG 2 cut(s) 811, 1163
BseDI CCNNGG 6 cut(s) 7, 282, 638, 809, 1162, 1250
BseGI GGATG 4 cut(s) 395, 822, 1035, 1310
BseLI CCNNNNNNNGG 4 cut(s) 208, 660, 1111, 1256
BseMII CTCAG 2 cut(s) 309, 1383
BseNI ACTGG 2 cut(s) 526, 1030
BseRI GAGGAG 4 cut(s) 172, 279, 984, 1294
BseSI GKGCMC 2 cut(s) 181, 810
BseX3I CGGCCG 2 cut(s) 117, 199
BseXI GCAGC 2 cut(s) 586, 1215
BsgI GTGCAG 2 cut(s) 593, 1356
Bsh1236I CGCG 1 cut(s) 1252
Bsh1285I CGRYCG 2 cut(s) 120, 202
BshFI GGCC 5 cut(s) 44, 119, 201, 989, 1094
BshNI GGYRCC 2 cut(s) 176, 866
BshTI ACCGGT 2 cut(s) 173, 844
BsiEI CGRYCG 2 cut(s) 120, 202
BsiHKAI GWGCWC 2 cut(s) 112, 507
BsiHKCI CYCGRG 1 cut(s) 340
BsiSI CCGG 9 cut(s) 33, 45, 54, 116, 174, 202, 425, 518, 845
BslI CCNNNNNNNGG 4 cut(s) 208, 660, 1111, 1256
BsmAI GTCTC 1 cut(s) 1187
BsmI GAATGC 1 cut(s) 183
BsnI GGCC 5 cut(s) 44, 119, 201, 989, 1094
BsoBI CYCGRG 1 cut(s) 340
Bsp1286I GDGCHC 4 cut(s) 112, 181, 507, 810
Bsp143I GATC 5 cut(s) 3, 550, 688, 910, 1259
Bsp1720I GCTNAGC 1 cut(s) 1369
Bsp19I CCATGG 2 cut(s) 7, 282
BspANI GGCC 5 cut(s) 44, 119, 201, 989, 1094
BspCNI CTCAG 2 cut(s) 310, 1382
BspFNI CGCG 1 cut(s) 1252
BspHI TCATGA 3 cut(s) 586, 876, 1379
BspLI GGNNCC 3 cut(s) 178, 652, 868
BspPI GGATC 1 cut(s) 1267
BspT107I GGYRCC 2 cut(s) 176, 866
BsrBI CCGCTC 2 cut(s) 379, 1097
BsrFI RCCGGY 5 cut(s) 32, 115, 173, 424, 844
BsrI ACTGG 2 cut(s) 526, 1030
BssAI RCCGGY 5 cut(s) 32, 115, 173, 424, 844
BssECI CCNNGG 6 cut(s) 7, 282, 638, 809, 1162, 1250
BssMI GATC 5 cut(s) 3, 550, 688, 910, 1259
BssNI GRCGYC 1 cut(s) 30
BssSI CACGAG 1 cut(s) 906
BssT1I CCWWGG 2 cut(s) 7, 282
Bst2BI CACGAG 1 cut(s) 906
Bst2UI CCWGG 2 cut(s) 811, 1163
Bst4CI ACNGT 6 cut(s) 85, 407, 544, 860, 874, 941
Bst6I CTCTTC 2 cut(s) 236, 818
BstACI GRCGYC 1 cut(s) 30
BstAPI GCANNNNNTGC 1 cut(s) 511
BstC8I GCNNGC 4 cut(s) 168, 181, 430, 744
BstDEI CTNAG 2 cut(s) 318, 1369
BstDSI CCRYGG 3 cut(s) 7, 282, 1250
BstF5I GGATG 4 cut(s) 395, 822, 1035, 1310
BstFNI CGCG 1 cut(s) 1252
BstHHI GCGC 1 cut(s) 601
BstKTI GATC 5 cut(s) 6, 553, 691, 913, 1262
BstMAI GTCTC 1 cut(s) 1187
BstMBI GATC 5 cut(s) 3, 550, 688, 910, 1259
BstMCI CGRYCG 2 cut(s) 120, 202
BstMWI GCNNNNNNNGC 9 cut(s) 18, 50, 116, 176, 284, 376, 444, 511, 605
BstNI CCWGG 2 cut(s) 811, 1163
BstSCI CCNGG 2 cut(s) 809, 1161
BstSFI CTRYAG 1 cut(s) 81
BstSLI GKGCMC 2 cut(s) 181, 810
BstUI CGCG 1 cut(s) 1252
BstV1I GCAGC 2 cut(s) 586, 1215
BstXI CCANNNNNNTGG 1 cut(s) 817
BstZI CGGCCG 2 cut(s) 117, 199
BsuRI GGCC 5 cut(s) 44, 119, 201, 989, 1094
BtgI CCRYGG 3 cut(s) 7, 282, 1250
BtsCI GGATG 4 cut(s) 395, 822, 1035, 1310
BtsIMutI CAGTG 1 cut(s) 937
Cac8I GCNNGC 4 cut(s) 168, 181, 430, 744
CciI TCATGA 3 cut(s) 586, 876, 1379
CfoI GCGC 1 cut(s) 601
Cfr10I RCCGGY 5 cut(s) 32, 115, 173, 424, 844
Cfr13I GGNCC 1 cut(s) 236
Cfr42I CCGCGG 1 cut(s) 1253
CpoI CGGWCCG 1 cut(s) 236
CseI GACGC 1 cut(s) 38
Csp6I GTAC 3 cut(s) 714, 720, 901
CspAI ACCGGT 2 cut(s) 173, 844
CspI CGGWCCG 1 cut(s) 236
CviAII CATG 8 cut(s) 8, 192, 283, 509, 587, 877, 1110, 1380
CviQI GTAC 3 cut(s) 714, 720, 901
DdeI CTNAG 2 cut(s) 318, 1369
DpnI GATC 5 cut(s) 5, 552, 690, 912, 1261
DpnII GATC 5 cut(s) 3, 550, 688, 910, 1259
DraIII CACNNNGTG 1 cut(s) 511
EaeI YGGCCR 4 cut(s) 42, 117, 199, 1092
EagI CGGCCG 2 cut(s) 117, 199
Eam1104I CTCTTC 2 cut(s) 236, 818
EarI CTCTTC 2 cut(s) 236, 818
Ecl136II GAGCTC 1 cut(s) 110
EclXI CGGCCG 2 cut(s) 117, 199
Eco130I CCWWGG 2 cut(s) 7, 282
Eco24I GRGCYC 1 cut(s) 112
Eco47I GGWCC 1 cut(s) 236
Eco52I CGGCCG 2 cut(s) 117, 199
Eco53kI GAGCTC 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 340
EcoICRI GAGCTC 1 cut(s) 110
EcoRII CCWGG 2 cut(s) 809, 1161
EcoT14I CCWWGG 2 cut(s) 7, 282
EcoT22I ATGCAT 1 cut(s) 1048
EcoT38I GRGCYC 1 cut(s) 112
ErhI CCWWGG 2 cut(s) 7, 282
FaeI CATG 8 cut(s) 11, 195, 286, 512, 590, 880, 1113, 1383
FalI AAGNNNNNCTT 4 cut(s) 1073, 1105, 1160, 1192
FatI CATG 8 cut(s) 7, 191, 282, 508, 586, 876, 1109, 1379
FauI CCCGC 2 cut(s) 188, 384
FbaI TGATCA 2 cut(s) 550, 688
FblI GTMKAC 1 cut(s) 755
Fnu4HI GCNGC 5 cut(s) 279, 315, 575, 1095, 1229
FokI GGATG 4 cut(s) 382, 829, 1042, 1317
FriOI GRGCYC 1 cut(s) 112
Fsp4HI GCNGC 5 cut(s) 279, 315, 575, 1095, 1229
FspBI CTAG 2 cut(s) 717, 1374
FspI TGCGCA 1 cut(s) 600
GlaI GCGC 1 cut(s) 600
GluI GCNGC 5 cut(s) 279, 315, 575, 1095, 1229
HaeIII GGCC 5 cut(s) 44, 119, 201, 989, 1094
HapII CCGG 9 cut(s) 33, 45, 54, 116, 174, 202, 425, 518, 845
HgaI GACGC 1 cut(s) 38
HhaI GCGC 1 cut(s) 601
Hin1I GRCGYC 1 cut(s) 30
Hin1II CATG 8 cut(s) 11, 195, 286, 512, 590, 880, 1113, 1383
Hin6I GCGC 1 cut(s) 599
HinP1I GCGC 1 cut(s) 599
HincII GTYRAC 1 cut(s) 756
HindII GTYRAC 1 cut(s) 756
HindIII AAGCTT 1 cut(s) 1295
HpaII CCGG 9 cut(s) 33, 45, 54, 116, 174, 202, 425, 518, 845
HphI GGTGA 6 cut(s) 357, 445, 832, 859, 872, 1366
Hpy166II GTNNAC 3 cut(s) 756, 1054, 1247
Hpy188III TCNNGA 6 cut(s) 587, 877, 908, 929, 1139, 1380
Hpy8I GTNNAC 3 cut(s) 756, 1054, 1247
Hpy99I CGWCG 2 cut(s) 32, 66
HpyCH4III ACNGT 6 cut(s) 85, 407, 544, 860, 874, 941
HpyCH4IV ACGT 2 cut(s) 837, 1287
HpyCH4V TGCA 3 cut(s) 574, 1046, 1337
HpyF10VI GCNNNNNNNGC 9 cut(s) 18, 50, 116, 176, 284, 376, 444, 511, 605
HpyF3I CTNAG 2 cut(s) 318, 1369
HpySE526I ACGT 2 cut(s) 837, 1287
Hsp92I GRCGYC 1 cut(s) 30
Hsp92II CATG 8 cut(s) 11, 195, 286, 512, 590, 880, 1113, 1383
HspAI GCGC 1 cut(s) 599
Ksp22I TGATCA 2 cut(s) 550, 688
KspI CCGCGG 1 cut(s) 1253
Kzo9I GATC 5 cut(s) 3, 550, 688, 910, 1259
LmnI GCTCC 2 cut(s) 115, 656
Lsp1109I GCAGC 2 cut(s) 586, 1215
MaeI CTAG 2 cut(s) 717, 1374
MaeII ACGT 2 cut(s) 837, 1287
MaeIII GTNAC 2 cut(s) 148, 860
MalI GATC 5 cut(s) 5, 552, 690, 912, 1261
MbiI CCGCTC 2 cut(s) 379, 1097
MboI GATC 5 cut(s) 3, 550, 688, 910, 1259
MfeI CAATTG 1 cut(s) 796
MhlI GDGCHC 4 cut(s) 112, 181, 507, 810
MluCI AATT 4 cut(s) 101, 617, 782, 796
MlyI GAGTC 1 cut(s) 1223
MmeI TCCRAC 3 cut(s) 858, 1152, 1197
Mph1103I ATGCAT 1 cut(s) 1048
MroXI GAANNNNTTC 1 cut(s) 827
MslI CAYNNNNRTG 2 cut(s) 146, 875
MspA1I CMGCKG 2 cut(s) 317, 1252
MspI CCGG 9 cut(s) 33, 45, 54, 116, 174, 202, 425, 518, 845
MspR9I CCNGG 2 cut(s) 811, 1163
MunI CAATTG 1 cut(s) 796
Mva1269I GAATGC 1 cut(s) 183
MvaI CCWGG 2 cut(s) 811, 1163
MvnI CGCG 1 cut(s) 1252
MwoI GCNNNNNNNGC 9 cut(s) 18, 50, 116, 176, 284, 376, 444, 511, 605
NcoI CCATGG 2 cut(s) 7, 282
NdeII GATC 5 cut(s) 3, 550, 688, 910, 1259
NlaIII CATG 8 cut(s) 11, 195, 286, 512, 590, 880, 1113, 1383
NlaIV GGNNCC 3 cut(s) 178, 652, 868
NmeAIII GCCGAG 1 cut(s) 145
NmuCI GTSAC 2 cut(s) 148, 860
NsbI TGCGCA 1 cut(s) 600
NsiI ATGCAT 1 cut(s) 1048
PaeR7I CTCGAG 1 cut(s) 340
PagI TCATGA 3 cut(s) 586, 876, 1379
PcsI WCGNNNNNNNCGW 2 cut(s) 70, 870
PctI GAATGC 1 cut(s) 183
PdmI GAANNNNTTC 1 cut(s) 827
PfeI GAWTC 9 cut(s) 48, 643, 681, 952, 977, 983, 1115, 1135, 1158
PflFI GACNNNGTC 1 cut(s) 544
PinAI ACCGGT 2 cut(s) 173, 844
PkrI GCNGC 5 cut(s) 280, 316, 576, 1096, 1230
PleI GAGTC 1 cut(s) 1222
PpsI GAGTC 1 cut(s) 1222
Psp124BI GAGCTC 1 cut(s) 112
Psp6I CCWGG 2 cut(s) 809, 1161
PspGI CCWGG 2 cut(s) 809, 1161
PspN4I GGNNCC 3 cut(s) 178, 652, 868
PspPI GGNCC 1 cut(s) 236
PspXI VCTCGAGB 1 cut(s) 340
PsyI GACNNNGTC 1 cut(s) 544
RsaI GTAC 3 cut(s) 715, 721, 902
RsaNI GTAC 3 cut(s) 714, 720, 901
RseI CAYNNNNRTG 2 cut(s) 146, 875
Rsr2I CGGWCCG 1 cut(s) 236
RsrII CGGWCCG 1 cut(s) 236
SacI GAGCTC 1 cut(s) 112
SacII CCGCGG 1 cut(s) 1253
SalI GTCGAC 1 cut(s) 754
SatI GCNGC 5 cut(s) 279, 315, 575, 1095, 1229
Sau3AI GATC 5 cut(s) 3, 550, 688, 910, 1259
Sau96I GGNCC 1 cut(s) 236
ScaI AGTACT 2 cut(s) 715, 902
SchI GAGTC 1 cut(s) 1223
ScrFI CCNGG 2 cut(s) 811, 1163
SduI GDGCHC 4 cut(s) 112, 181, 507, 810
SfcI CTRYAG 1 cut(s) 81
Sfr274I CTCGAG 1 cut(s) 340
Sfr303I CCGCGG 1 cut(s) 1253
SgrAI CRCCGGYG 1 cut(s) 173
SgrBI CCGCGG 1 cut(s) 1253
SinI GGWCC 1 cut(s) 236
SlaI CTCGAG 1 cut(s) 340
SmiMI CAYNNNNRTG 2 cut(s) 146, 875
SmlI CTYRAG 1 cut(s) 340
SmoI CTYRAG 1 cut(s) 340
SpeI ACTAGT 1 cut(s) 716
Sse9I AATT 4 cut(s) 101, 617, 782, 796
SspMI CTAG 2 cut(s) 717, 1374
SstI GAGCTC 1 cut(s) 112
StyD4I CCNGG 2 cut(s) 809, 1161
StyI CCWWGG 2 cut(s) 7, 282
TaaI ACNGT 6 cut(s) 85, 407, 544, 860, 874, 941
TaiI ACGT 2 cut(s) 840, 1290
TaqI TCGA 6 cut(s) 27, 61, 341, 755, 1138, 1156
TaqII GACCGA 1 cut(s) 253
TasI AATT 4 cut(s) 101, 617, 782, 796
TatI WGTACW 3 cut(s) 713, 719, 900
TauI GCSGC 3 cut(s) 281, 317, 1097
TfiI GAWTC 9 cut(s) 48, 643, 681, 952, 977, 983, 1115, 1135, 1158
TscAI CASTG 1 cut(s) 944
TseFI GTSAC 2 cut(s) 148, 860
TseI GCWGC 2 cut(s) 574, 1228
Tsp45I GTSAC 2 cut(s) 148, 860
TspDTI ATGAA 2 cut(s) 524, 1046
TspGWI ACGGA 4 cut(s) 62, 177, 981, 1272
TspRI CASTG 1 cut(s) 944
Tth111I GACNNNGTC 1 cut(s) 544
VpaK11BI GGWCC 1 cut(s) 236
XapI RAATTY 2 cut(s) 617, 782
XcmI CCANNNNNNNNNTGG 1 cut(s) 1074
XhoI CTCGAG 1 cut(s) 340
XmiI GTMKAC 1 cut(s) 755
XmnI GAANNNNTTC 1 cut(s) 827
XspI CTAG 2 cut(s) 717, 1374
ZrmI AGTACT 2 cut(s) 715, 902
Zsp2I ATGCAT 1 cut(s) 1048
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.