Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0013119

Physical Location & Seq

Genomic Coordinates Forward (+)

8896683 .. 8900607

Gene Structure 3925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0054000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGTATAAGCATCGTGTCCCCGTTGAGAACGATGATACCTATATGATGAGCACAACACGAGGTACGAACTATGATTTCGAAAGTGTTGAGGAGCAAGGGCGAGATGGTTCATCGAAAACTGTAGATGCACTTTCAACCAAGAAAAAATTGAAAATTGCACTTCTTTCCGTTTCATTGTGGAACAAGCTATTCCTAATCGCATGTGTGATTGCAGTCTCATTAGACCCCTTGTTCTTTTACATTCCAATCATCAATGAAGATGAAAAGTGTCTTGGAATAGACAAAGAGTTGAGAACTATAGCTCTCATTTTGCGATCCCTCAGTGATATCATTTTCATAGTGCATATTGTATATCAAATTTGCGAAGCTACTATGGCGGCCTACAAAGTACACATAAAAGGAAAGTCCGAATTGGAATTGGATTGGTCATATTCGAAGATATCAATGGGTGAGATAATTCCATTTGCTAATTTAGTTGCTGGGAAGCTAGCATGGCGCTCCACGCTAACTGATATTTTGGCTGTTCTTCCCGTGCCACAATTTCTAGTGGTCTTTGGTTTCTTCAAAATGAGAGGCCGTGGATATTTGGAACGCAAGAAGATTCTCAATGTCTTTCTCCTGGGCCAATATTTGCCAAGGATTTATCGAATTTACTTATCATCTAAGAAACTTAGACAAACTACAGGAATTTGGGTTAAGGCTCTGTTCAACTTTTTTCTATATATACTAGCCAGTCATGTCATTGGAGCTTTTTGGTACTTCTTTTCTATTCAACGTGAAACGTCATGCTGGCATCATGCTTGTATAAAGAATAGTACAAATGTCGAAGGATGTATGAGTACTTTCTACTGTGATGGTCGCAATACTACCGCTAGAAATGTCACTTTTTTCAATCAGTTTTGCCACATCAATGTTGAAGACAATGCTACAGCGCTTTTTGATTTTGGAATATTTCTTAATTCTCTCAAGAATGGTAACACGGGCCATATACATTTTGCAACAAAGTTGTCCTACTCATTTTGGTGGGGATTGCGGAATCTGAGCAATTTTGGCACAAGTCTCGAAACAAGTACCTATGTGTGGGAAAGTTGCTTTGCAGTATTTATTTGTGTCATTGGCTTGCTACTGTTTCTATATCTGATTGGAAATGTTCAGACCTTCATGTCCATGGAAGCTCAAAGATGGGAGGTTATAAGAAACAAGATGCTTTTGAAAGAGAAAGATATAGAAAGATGGATGGACAGGAATGAACTGCCCGATGATATGAAGAAAGAAATCAAGAAAAACATAACGCAAAAATTGGAAGAAAACAAAGATTCAGATCTGGAGAACCTTTTCAATATTCTTCCCTGGTACACCAAAAAGTACCTAAAGCGAGTTCTCTGCATGGACATACTAAAGAAAGTACCTAAGCTGGAAAGAATGGATGAGAAAGTGTTGAAAATGATCTGCGACTATCTAAAGCCAGAGATGTATGCTGAGGGCACCATGGTTTTTCACATGGGAGAACCGCTTGATAGCATGCTATTCATTACAGAAGGCACTATACTGACCTACAAAACTACCAGTACTGATAGTCATGCTCATGAAAACGCAAAATTGGGTCCTCCTGCATCCCCATCAATCGGCACCCTTGAGAAAGGCTACTTCTATGGCGAACAACTGCTGCACTGGGCATCACAAAAAAACGTGAATTTAACGGAGGTCCCTAGCTCTGCCGACAATGTGAAGTGCCATACAAAAGTAGAAGGCTTTGTTCTCATGGCCAAGGACTTAAGAACTGTAGTCTCCAAATGTGAGTACTGGTGGAAATTAAGCATTAGTAATCCTAGAGTGGGTGGTACTCGGACCACACCAAATGCTAGGAATGTGCAGCAGAAACCTGGAGTGGATCCCCAGTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0006996 GO:0008150 GO:0008152 GO:0008219 GO:0009295 GO:0009507 GO:0009536 GO:0009579 GO:0009636 GO:0009657 GO:0009987 GO:0010363 GO:0010941 GO:0015035 GO:0015036 GO:0016043 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019725 GO:0031347 GO:0031348 GO:0033554 GO:0034051 GO:0034599 GO:0042221 GO:0042592 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045454 GO:0045824 GO:0047134 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0070887 GO:0071840 GO:0080134 GO:0080135 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

634

Amino Acids

73.15

Weight (kDa)

8.8

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	59 - 393	8.3e-10	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06730
fragaria_vesca	FvH4_7g03410
malus_domestica	MD02G1283300.v1.1 MD05G1114000.v1.1 MD07G1048800.v1.1
prunus_persica	Prupe.2G039200_v2.0.a1
pyrus_communis	pycom02g24140 pycom07g03540
rosa_chinensis	RchiOBHm_Chr1g0325731
rosa_laevigata	RLG00000030110
rosa_multiflora	Rmu_sc0000703.1_g000005
rosa_roxburghii	Rroxscaffold_4G00324440
rosa_rugosa	Rorug01G0054000 Rorug01G0054100
rosa_samantha	Rh1BG057000 Rh1CG070200 Rh1DG074800
rosa_wichuraiana	Rw1G005760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1193
AasI	GACNNNNNNGTC	1 cut(s)	1162
AccB1I	GGYRCC	2 cut(s)	1484, 1628
AciI	CCGC	4 cut(s)	377, 870, 1033, 1511
AclWI	GGATC	3 cut(s)	309, 1886, 1899
AcoI	YGGCCR	1 cut(s)	1764
AcsI	RAATTY	4 cut(s)	357, 648, 687, 1693
AfeI	AGCGCT	1 cut(s)	933
AfiI	CCNNNNNNNGG	3 cut(s)	1080, 1625, 1835
AflII	CTTAAG	1 cut(s)	1774
AjnI	CCWGG	3 cut(s)	618, 1349, 1882
AjuI	GAANNNNNNNTTGG	2 cut(s)	255, 287
AluBI	AGCT	8 cut(s)	187, 302, 368, 487, 749, 1175, 1414, 1713
AluI	AGCT	8 cut(s)	187, 302, 368, 487, 749, 1175, 1414, 1713
Alw21I	GWGCWC	1 cut(s)	53
Alw26I	GTCTC	3 cut(s)	220, 1064, 1792
AlwI	GGATC	3 cut(s)	309, 1886, 1899
Aor51HI	AGCGCT	1 cut(s)	933
AoxI	GGCC	5 cut(s)	378, 574, 622, 982, 1764
ApeKI	GCWGC	2 cut(s)	1666, 1873
ApoI	RAATTY	4 cut(s)	357, 648, 687, 1693
Asp700I	GAANNNNTTC	1 cut(s)	1334
AspLEI	GCGC	2 cut(s)	498, 934
AspS9I	GGNCC	5 cut(s)	622, 982, 1604, 1705, 1848
AsuHPI	GGTGA	1 cut(s)	461
AsuII	TTCGAA	2 cut(s)	78, 434
AsuNHI	GCTAGC	1 cut(s)	487
AvaII	GGWCC	3 cut(s)	1604, 1705, 1848
BaeGI	GKGCMC	1 cut(s)	1487
BalI	TGGCCA	1 cut(s)	1766
BamHI	GGATCC	1 cut(s)	1891
BanI	GGYRCC	2 cut(s)	1484, 1628
BarI	GAAGNNNNNNTAC	2 cut(s)	1530, 1562
BauI	CACGAG	1 cut(s)	57
BbsI	GAAGAC	1 cut(s)	924
Bbv12I	GWGCWC	1 cut(s)	53
BbvCI	CCTCAGC	1 cut(s)	1479
BbvI	GCAGC	2 cut(s)	1653, 1885
BccI	CCATC	6 cut(s)	98, 848, 1176, 1227, 1231, 1627
BceAI	ACGGC	1 cut(s)	561
BcgI	CGANNNNNNTGC	4 cut(s)	1042, 1076, 1365, 1399
BciT130I	CCWGG	3 cut(s)	620, 1351, 1884
BcoDI	GTCTC	3 cut(s)	220, 1064, 1792
BfaI	CTAG	8 cut(s)	488, 545, 728, 873, 1710, 1830, 1863, 1903
BfmI	CTRYAG	5 cut(s)	120, 297, 681, 927, 1782
BfoI	RGCGCY	2 cut(s)	499, 935
BfrI	CTTAAG	1 cut(s)	1774
BglII	AGATCT	1 cut(s)	1321
BisI	GCNGC	3 cut(s)	378, 1667, 1874
BlsI	GCNGC	3 cut(s)	379, 1668, 1875
BmcAI	AGTACT	4 cut(s)	841, 1570, 1802, 1901
Bme1390I	CCNGG	3 cut(s)	620, 1351, 1884
Bme18I	GGWCC	3 cut(s)	1604, 1705, 1848
BmgT120I	GGNCC	5 cut(s)	622, 982, 1604, 1705, 1848
BmiI	GGNNCC	5 cut(s)	1486, 1605, 1630, 1707, 1893
BmrFI	CCNGG	3 cut(s)	620, 1351, 1884
BmrI	ACTGGG	2 cut(s)	1681, 1891
BmsI	GCATC	6 cut(s)	19, 115, 802, 1194, 1622, 1685
BmtI	GCTAGC	1 cut(s)	491
BmuI	ACTGGG	2 cut(s)	1681, 1891
BpiI	GAAGAC	1 cut(s)	924
BpmI	CTGGAG	2 cut(s)	1346, 1905
Bpu10I	CCTNAGC	2 cut(s)	1410, 1479
Bpu14I	TTCGAA	2 cut(s)	78, 434
BpuEI	CTTGAG	2 cut(s)	950, 1655
BsaBI	GATNNNNATC	1 cut(s)	1320
BsaJI	CCNNGG	7 cut(s)	577, 619, 635, 1167, 1349, 1488, 1767
Bsc4I	CCNNNNNNNGG	3 cut(s)	1080, 1625, 1835
Bse1I	ACTGG	5 cut(s)	732, 1566, 1676, 1808, 1897
Bse8I	GATNNNNATC	1 cut(s)	1320
BseBI	CCWGG	3 cut(s)	620, 1351, 1884
BseDI	CCNNGG	7 cut(s)	577, 619, 635, 1167, 1349, 1488, 1767
BseGI	GGATG	4 cut(s)	836, 1242, 1432, 1613
BseJI	GATNNNNATC	1 cut(s)	1320
BseLI	CCNNNNNNNGG	3 cut(s)	1080, 1625, 1835
BseMII	CTCAG	3 cut(s)	334, 1031, 1470
BseNI	ACTGG	5 cut(s)	732, 1566, 1676, 1808, 1897
BseRI	GAGGAG	1 cut(s)	104
BseSI	GKGCMC	1 cut(s)	1487
BseXI	GCAGC	2 cut(s)	1653, 1885
BseYI	CCCAGC	1 cut(s)	479
BsgI	GTGCAG	2 cut(s)	1652, 1892
BshFI	GGCC	5 cut(s)	380, 576, 624, 984, 1766
BshNI	GGYRCC	2 cut(s)	1484, 1628
BsiHKAI	GWGCWC	1 cut(s)	53
BslFI	GGGAC	2 cut(s)	2, 1691
BslI	CCNNNNNNNGG	3 cut(s)	1080, 1625, 1835
BsmAI	GTCTC	3 cut(s)	220, 1064, 1792
BsmFI	GGGAC	2 cut(s)	2, 1691
BsnI	GGCC	5 cut(s)	380, 576, 624, 984, 1766
Bsp119I	TTCGAA	2 cut(s)	78, 434
Bsp1286I	GDGCHC	2 cut(s)	53, 1487
Bsp143I	GATC	4 cut(s)	314, 1321, 1446, 1891
Bsp19I	CCATGG	2 cut(s)	1167, 1488
BspACI	CCGC	4 cut(s)	377, 870, 1033, 1511
BspANI	GGCC	5 cut(s)	380, 576, 624, 984, 1766
BspCNI	CTCAG	3 cut(s)	333, 1032, 1471
BspHI	TCATGA	1 cut(s)	1585
BspLI	GGNNCC	5 cut(s)	1486, 1605, 1630, 1707, 1893
BspOI	GCTAGC	1 cut(s)	491
BspPI	GGATC	3 cut(s)	309, 1886, 1899
BspT104I	TTCGAA	2 cut(s)	78, 434
BspT107I	GGYRCC	2 cut(s)	1484, 1628
BspTI	CTTAAG	1 cut(s)	1774
BsrI	ACTGG	5 cut(s)	732, 1566, 1676, 1808, 1897
BssECI	CCNNGG	7 cut(s)	577, 619, 635, 1167, 1349, 1488, 1767
BssMI	GATC	4 cut(s)	314, 1321, 1446, 1891
BssSI	CACGAG	1 cut(s)	57
BssT1I	CCWWGG	4 cut(s)	635, 1167, 1488, 1767
Bst2BI	CACGAG	1 cut(s)	57
Bst2UI	CCWGG	3 cut(s)	620, 1351, 1884
Bst4CI	ACNGT	4 cut(s)	121, 851, 1128, 1783
BstAFI	CTTAAG	1 cut(s)	1774
BstBI	TTCGAA	2 cut(s)	78, 434
BstC8I	GCNNGC	4 cut(s)	489, 791, 1121, 1523
BstDEI	CTNAG	6 cut(s)	320, 663, 671, 1040, 1410, 1479
BstDSI	CCRYGG	3 cut(s)	577, 1167, 1488
BstF5I	GGATG	4 cut(s)	836, 1242, 1432, 1613
BstH2I	RGCGCY	2 cut(s)	499, 935
BstHHI	GCGC	2 cut(s)	498, 934
BstKTI	GATC	4 cut(s)	317, 1324, 1449, 1894
BstMAI	GTCTC	3 cut(s)	220, 1064, 1792
BstMBI	GATC	4 cut(s)	314, 1321, 1446, 1891
BstMWI	GCNNNNNNNGC	4 cut(s)	374, 493, 502, 1050
BstNI	CCWGG	3 cut(s)	620, 1351, 1884
BstNSI	RCATGY	2 cut(s)	204, 1525
BstSCI	CCNGG	3 cut(s)	618, 1349, 1882
BstSFI	CTRYAG	5 cut(s)	120, 297, 681, 927, 1782
BstSLI	GKGCMC	1 cut(s)	1487
BstV1I	GCAGC	2 cut(s)	1653, 1885
BstV2I	GAAGAC	1 cut(s)	924
BstX2I	RGATCY	2 cut(s)	1321, 1891
BstYI	RGATCY	2 cut(s)	1321, 1891
BsuRI	GGCC	5 cut(s)	380, 576, 624, 984, 1766
BtgI	CCRYGG	3 cut(s)	577, 1167, 1488
BtsCI	GGATG	4 cut(s)	836, 1242, 1432, 1613
BtsIMutI	CAGTG	2 cut(s)	328, 1669
Cac8I	GCNNGC	4 cut(s)	489, 791, 1121, 1523
CciI	TCATGA	1 cut(s)	1585
CfoI	GCGC	2 cut(s)	498, 934
Cfr13I	GGNCC	5 cut(s)	622, 982, 1604, 1705, 1848
DdeI	CTNAG	6 cut(s)	320, 663, 671, 1040, 1410, 1479
DpnI	GATC	4 cut(s)	316, 1323, 1448, 1893
DpnII	GATC	4 cut(s)	314, 1321, 1446, 1891
DrdI	GACNNNNNNGTC	1 cut(s)	1162
DseDI	GACNNNNNNGTC	1 cut(s)	1162
EaeI	YGGCCR	1 cut(s)	1764
Eco130I	CCWWGG	4 cut(s)	635, 1167, 1488, 1767
Eco32I	GATATC	2 cut(s)	328, 441
Eco47I	GGWCC	3 cut(s)	1604, 1705, 1848
Eco47III	AGCGCT	1 cut(s)	933
EcoO109I	RGGNCCY	2 cut(s)	1604, 1705
EcoRII	CCWGG	3 cut(s)	618, 1349, 1882
EcoRV	GATATC	2 cut(s)	328, 441
EcoT14I	CCWWGG	4 cut(s)	635, 1167, 1488, 1767
ErhI	CCWWGG	4 cut(s)	635, 1167, 1488, 1767
FaqI	GGGAC	2 cut(s)	2, 1691
Fnu4HI	GCNGC	3 cut(s)	378, 1667, 1874
FokI	GGATG	4 cut(s)	843, 1249, 1439, 1600
Fsp4HI	GCNGC	3 cut(s)	378, 1667, 1874
FspBI	CTAG	8 cut(s)	488, 545, 728, 873, 1710, 1830, 1863, 1903
GlaI	GCGC	2 cut(s)	497, 933
GluI	GCNGC	3 cut(s)	378, 1667, 1874
GsaI	CCCAGC	1 cut(s)	483
GsuI	CTGGAG	2 cut(s)	1346, 1905
HaeII	RGCGCY	2 cut(s)	499, 935
HaeIII	GGCC	5 cut(s)	380, 576, 624, 984, 1766
HhaI	GCGC	2 cut(s)	498, 934
Hin6I	GCGC	2 cut(s)	496, 932
HinP1I	GCGC	2 cut(s)	496, 932
HinfI	GANTC	3 cut(s)	601, 1036, 1316
HphI	GGTGA	1 cut(s)	461
Hpy166II	GTNNAC	2 cut(s)	391, 1356
Hpy188I	TCNGA	6 cut(s)	409, 1041, 1140, 1155, 1321, 1848
Hpy188III	TCNNGA	5 cut(s)	967, 1061, 1279, 1325, 1586
Hpy8I	GTNNAC	2 cut(s)	391, 1356
HpyAV	CCTTC	4 cut(s)	821, 1168, 1532, 1742
HpyCH4III	ACNGT	4 cut(s)	121, 851, 1128, 1783
HpyCH4IV	ACGT	3 cut(s)	775, 782, 1689
HpyF10VI	GCNNNNNNNGC	4 cut(s)	374, 493, 502, 1050
HpyF3I	CTNAG	6 cut(s)	320, 663, 671, 1040, 1410, 1479
HpySE526I	ACGT	3 cut(s)	775, 782, 1689
HspAI	GCGC	2 cut(s)	496, 932
Kzo9I	GATC	4 cut(s)	314, 1321, 1446, 1891
LmnI	GCTCC	3 cut(s)	91, 503, 746
Lsp1109I	GCAGC	2 cut(s)	1653, 1885
LweI	GCATC	6 cut(s)	19, 115, 802, 1194, 1622, 1685
MaeI	CTAG	8 cut(s)	488, 545, 728, 873, 1710, 1830, 1863, 1903
MaeII	ACGT	3 cut(s)	775, 782, 1689
MaeIII	GTNAC	2 cut(s)	880, 974
MalI	GATC	4 cut(s)	316, 1323, 1448, 1893
MboI	GATC	4 cut(s)	314, 1321, 1446, 1891
MboII	GAAGA	9 cut(s)	269, 448, 518, 553, 610, 929, 1279, 1316, 1337
MflI	RGATCY	2 cut(s)	1321, 1891
MhlI	GDGCHC	2 cut(s)	53, 1487
MlsI	TGGCCA	1 cut(s)	1766
MluNI	TGGCCA	1 cut(s)	1766
MnlI	CCTC	8 cut(s)	53, 82, 329, 566, 1180, 1474, 1617, 1696
Mox20I	TGGCCA	1 cut(s)	1766
MroXI	GAANNNNTTC	1 cut(s)	1334
MscI	TGGCCA	1 cut(s)	1766
MseI	TTAA	5 cut(s)	696, 957, 1697, 1775, 1814
MslI	CAYNNNNRTG	4 cut(s)	909, 1021, 1166, 1584
Msp20I	TGGCCA	1 cut(s)	1766
MspCI	CTTAAG	1 cut(s)	1774
MspR9I	CCNGG	3 cut(s)	620, 1351, 1884
MvaI	CCWGG	3 cut(s)	620, 1351, 1884
MwoI	GCNNNNNNNGC	4 cut(s)	374, 493, 502, 1050
NcoI	CCATGG	2 cut(s)	1167, 1488
NdeII	GATC	4 cut(s)	314, 1321, 1446, 1891
NheI	GCTAGC	1 cut(s)	487
NlaIV	GGNNCC	5 cut(s)	1486, 1605, 1630, 1707, 1893
NmuCI	GTSAC	1 cut(s)	880
NspI	RCATGY	2 cut(s)	204, 1525
NspV	TTCGAA	2 cut(s)	78, 434
PaeI	GCATGC	1 cut(s)	1525
PagI	TCATGA	1 cut(s)	1585
PdmI	GAANNNNTTC	1 cut(s)	1334
PfeI	GAWTC	3 cut(s)	601, 1036, 1316
PkrI	GCNGC	3 cut(s)	379, 1668, 1875
PpuMI	RGGWCCY	2 cut(s)	1604, 1705
PsiI	TTATAA	1 cut(s)	1193
Psp5II	RGGWCCY	2 cut(s)	1604, 1705
Psp6I	CCWGG	3 cut(s)	618, 1349, 1882
PspFI	CCCAGC	1 cut(s)	479
PspGI	CCWGG	3 cut(s)	618, 1349, 1882
PspN4I	GGNNCC	5 cut(s)	1486, 1605, 1630, 1707, 1893
PspPI	GGNCC	5 cut(s)	622, 982, 1604, 1705, 1848
PspPPI	RGGWCCY	2 cut(s)	1604, 1705
PsuI	RGATCY	2 cut(s)	1321, 1891
RseI	CAYNNNNRTG	4 cut(s)	909, 1021, 1166, 1584
SaqAI	TTAA	5 cut(s)	696, 957, 1697, 1775, 1814
SatI	GCNGC	3 cut(s)	378, 1667, 1874
Sau3AI	GATC	4 cut(s)	314, 1321, 1446, 1891
Sau96I	GGNCC	5 cut(s)	622, 982, 1604, 1705, 1848
ScaI	AGTACT	4 cut(s)	841, 1570, 1802, 1901
ScrFI	CCNGG	3 cut(s)	620, 1351, 1884
SduI	GDGCHC	2 cut(s)	53, 1487
SfaNI	GCATC	6 cut(s)	19, 115, 802, 1194, 1622, 1685
SfcI	CTRYAG	5 cut(s)	120, 297, 681, 927, 1782
SfuI	TTCGAA	2 cut(s)	78, 434
SinI	GGWCC	3 cut(s)	1604, 1705, 1848
SmiMI	CAYNNNNRTG	4 cut(s)	909, 1021, 1166, 1584
SmlI	CTYRAG	3 cut(s)	965, 1634, 1774
SmoI	CTYRAG	3 cut(s)	965, 1634, 1774
SphI	GCATGC	1 cut(s)	1525
SsiI	CCGC	4 cut(s)	377, 870, 1033, 1511
SspI	AATATT	3 cut(s)	629, 951, 1342
SspMI	CTAG	8 cut(s)	488, 545, 728, 873, 1710, 1830, 1863, 1903
StyD4I	CCNGG	3 cut(s)	618, 1349, 1882
StyI	CCWWGG	4 cut(s)	635, 1167, 1488, 1767
TaaI	ACNGT	4 cut(s)	121, 851, 1128, 1783
TaiI	ACGT	3 cut(s)	778, 785, 1692
TaqI	TCGA	6 cut(s)	78, 113, 434, 646, 825, 1062
TatI	WGTACW	6 cut(s)	388, 815, 839, 1568, 1800, 1899
TauI	GCSGC	1 cut(s)	380
TfiI	GAWTC	3 cut(s)	601, 1036, 1316
Tru1I	TTAA	5 cut(s)	696, 957, 1697, 1775, 1814
Tru9I	TTAA	5 cut(s)	696, 957, 1697, 1775, 1814
TscAI	CASTG	2 cut(s)	328, 1676
TseFI	GTSAC	1 cut(s)	880
TseI	GCWGC	2 cut(s)	1666, 1873
Tsp45I	GTSAC	1 cut(s)	880
TspGWI	ACGGA	2 cut(s)	157, 1715
TspRI	CASTG	2 cut(s)	328, 1676
Vha464I	CTTAAG	1 cut(s)	1774
VpaK11BI	GGWCC	3 cut(s)	1604, 1705, 1848
XapI	RAATTY	4 cut(s)	357, 648, 687, 1693
XceI	RCATGY	2 cut(s)	204, 1525
XmnI	GAANNNNTTC	1 cut(s)	1334
XspI	CTAG	8 cut(s)	488, 545, 728, 873, 1710, 1830, 1863, 1903
ZrmI	AGTACT	4 cut(s)	841, 1570, 1802, 1901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.