Rorug01G0170600

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0017760
Physical Location & Seq
Forward (+)
23200746 .. 23203664
2919 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0170600.1

Sequence Viewer

Length: 2364 bp
ATGGTCTGCTTACATGGGAGAATGCTTCTTTTGCAACTCTCTTTGGCCGCAGTGCTATTAGCCTATGCAGCAACGACAATGCTAGCAGCTGCTCAAGCCCCGCCTGAATGCAATGAAAGCTGTGGTAGTGTCTCAATTCCATATCCGTTTGGTTTGAGTGATGGTTGTTACCTATATGTGCCTGGACAAGATGCTCAGCCATTCAAGATCACTTGCGACAACAGCACCTCGCAATCATCCCTAAAGTTCTTGGATAGCTATTACTTTCCCACAAACATTACCAACATTTCTGTGGGTGAAAGTGAGTTGCAAGTAATGGTGACCACGTCCCGAAATTGTTGGCCCAACAATTCATACGACTCCTCCTTGTACAGAGGCAGTGTGCTCGATCTGCCTCCTTCTTACACCATCTCGGACAAAAACAAGGTCTTTTCCGTTGGGTGCAACAAAGTAGCGATGTTCAAAGGTTTTCCTCTTAAAGTCACAGATCCAGAGCAACCCTTTGCAGTAGGGTTCAGCGGTGTAAGCTTGTGTCAAGATGAATTTGGCAAAAGATTCCCCGAGACTTGCACCGGATTTGGGTGCTCCGTAAATCCTATCCCTAGTGGACTGCAAAATATTACGGTGGATATGTGGACAGTTGGTGCCAGCCTCGGAGAAACGGACCAGTGGGGCCTAAGCTACCCTTGCAGCTACGGCTTCATTGTGGATGAGCGCAACTTCACATTTGCCGGCAATCAAAGTTTTAATGAACTGAACGGCACAAGACAGGAGCTTCCGGTGCTTGCTAATTGGGCGATTGGGAGTGACAACTGCGAAGCAGCAAAGAAGAACAATGAGACTGCTTTTGCATGCAAGGGTGTGAATACGAAGTGTGTCAACCGCGCTGGTGGTTATTTTTGCCAGTGTGAGGCAGGTTACGCAGGGAACCCATACCTCCTCAATGATTGCCTAGATATCAATGAGTGCAAGAATTTAACCCTCTGTAGTGCTCATGCAACTTGCATAAACTCAATTGGAAGTTACACTTGTAAATGTGACAAGGGCTATAGAAACGATGACAACGACAAGAATACTTGTGTCCAAATCAAGGAAACCTCCAGCAAAAATGACAAAGAAATGCAAATTTCACTGGGTGTCTGTTTAAGCTTCCTAGTCATGTTGATTATAACATTTTGGATATACTGCGGAATGAAAAGAAGAAAGTTCAAGCAACTCAAGGAGAAGTACTTCAAAGACAATGGTGGCTTCTTGTTACAACAAAAATTGGAGAATTTTGACGGACCTCAAGCGGCCAAAATCTTTACGAGAGAAGAGCTTAAGAAGGCCACAAACAACTTCGATGACAGCAGAAAAATTGGTGAAGGAGGCTATGGATTTGTTTATAGAGGAACATTGCCAGATAAAAAGGAGGTTGCCATAAAAGTGTCAAAAAGTAATGCCCCAATGACCCAAAGTAATCAATTCATTAATGAGGTAATTGTTCTTTCTCAAATCAACCATAGAAATGTCGTGAGGCTCCTCGGTTGTTGTTTGGATACCCAAACACCTTTACTGGTTTACGAGTTTATTAGCAATGGCACTCTTTATGAGCACATTCATAAAAAGAATGGCAAGGGACCGCTTTCTTTCGGGTTACGAATGAAGATAGCAGCAGAAACAGCAGGATCCCTAGCATACTTGCACTACTCTACTTCAATGCAGATTGTGCACCGAGATGTGAAAGCAACGAATATACTATTGGATGACAATTTCACAGCCAAAGTGTCAGATTTTGGAGCTTCGAAATTGGTTCCTGAAGATCAAAATCAGCTGTCCACTTTAGTGCAAGGTACGCTTGGCTACCTAGACCCTGAATATCTCCAGTCAAACACACTGACAGAGAAAAGTGATGTCTATAGTTTCGGCGTTGTCCTTGTGGAGCTAATAACGAGTCAAGTGGCAATTTCTTACAAGAAGCCTGAGGCAGAGAGAAACCTAGCGAACTTTTTTGTAACGTCGGTGGAAGAGAATCGCTTGGATCAGATTCTTGATCTTGAAATAATCAAAGAGGGAAGCTTTGAAATAGCTGAGCAAGTTGCCCATCTCGCCAAAAGATGTTTAAGTTTGAAAGGAGGGGATAGGCCTACGATGAGAGAAGTAGCTATGGAGCTAGAGGGAATACTGCAAGTTATGGCAAAGCATCCAGAGGGAAAGCCTGATGCCTCTCCGAAAGAGACCGACTACTTGCTTGCGATGTCACCTGCAAATGCTTACGTTGTTGATGTTAGAGGTGATGAAGGTGAATTTATAACCAGTATTGACTCCGACCAGAGCATGCAGAATCAAGCCCAGATAATGAAGCCTGATGATGGTGGGCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3

Protein Analysis

787

Amino Acids

86.91

Weight (kDa)

5.32

Isoelectric Point (pI)

30.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 37 - 105 4e-09 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 319 - 357 3.2e-09 Calcium-binding EGF domain
Pkinase PF00069 448 - 714 5.4e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 450 - 718 2.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1169, 2291
AarI CACCTGC 1 cut(s) 2251
Acc36I ACCTGC 2 cut(s) 905, 2251
AccB1I GGYRCC 1 cut(s) 644
AccII CGCG 1 cut(s) 885
AciI CCGC 7 cut(s) 48, 101, 519, 883, 1188, 1292, 1622
AclWI GGATC 4 cut(s) 482, 1662, 1675, 2028
AcoI YGGCCR 2 cut(s) 45, 1293
AcsI RAATTY 5 cut(s) 542, 973, 1125, 1273, 2285
AcuI CTGAAG 1 cut(s) 1818
AdeI CACNNNGTG 1 cut(s) 1136
AfaI GTAC 3 cut(s) 371, 1229, 1834
AfiI CCNNNNNNNGG 4 cut(s) 579, 910, 1090, 2351
AflII CTTAAG 1 cut(s) 1319
AgsI TTSAA 8 cut(s) 205, 463, 1210, 1234, 1698, 2039, 2063, 2110
AjiI CACGTC 1 cut(s) 327
AjnI CCWGG 1 cut(s) 181
AjuI GAANNNNNNNTTGG 2 cut(s) 1724, 1756
AleI CACNNNNGTG 1 cut(s) 1823
Alw21I GWGCWC 5 cut(s) 387, 587, 994, 1596, 1713
Alw26I GTCTC 4 cut(s) 136, 557, 833, 2210
Alw44I GTGCAC 1 cut(s) 1709
AlwI GGATC 4 cut(s) 482, 1662, 1675, 2028
Ama87I CYCGRG 1 cut(s) 560
AoxI GGCC 6 cut(s) 45, 341, 673, 1293, 1326, 2123
ApaLI GTGCAC 1 cut(s) 1709
ApeKI GCWGC 6 cut(s) 68, 86, 89, 690, 821, 1652
ApoI RAATTY 5 cut(s) 542, 973, 1125, 1273, 2285
ArsI GACNNNNNNTTYG 2 cut(s) 411, 443
AseI ATTAAT 1 cut(s) 1470
Asp700I GAANNNNTTC 1 cut(s) 1229
AspLEI GCGC 2 cut(s) 717, 887
AspS9I GGNCC 5 cut(s) 342, 664, 673, 1283, 1619
AsuHPI GGTGA 6 cut(s) 308, 331, 1373, 2232, 2285, 2294
AsuII TTCGAA 1 cut(s) 1784
AsuNHI GCTAGC 1 cut(s) 82
AvaI CYCGRG 1 cut(s) 560
AvaII GGWCC 3 cut(s) 664, 1283, 1619
AxyI CCTNAGG 1 cut(s) 1962
BaeGI GKGCMC 1 cut(s) 1713
BamHI GGATCC 1 cut(s) 1667
BanI GGYRCC 1 cut(s) 644
Bbv12I GWGCWC 5 cut(s) 387, 587, 994, 1596, 1713
BbvI GCAGC 6 cut(s) 76, 80, 98, 702, 833, 1664
BccI CCATC 4 cut(s) 155, 416, 2091, 2345
BceAI ACGGC 2 cut(s) 712, 775
BcgI CGANNNNNNTGC 2 cut(s) 367, 401
BciT130I CCWGG 1 cut(s) 183
BciVI GTATCC 1 cut(s) 1531
BcoDI GTCTC 4 cut(s) 136, 557, 833, 2210
BfaI CTAG 8 cut(s) 83, 603, 953, 1154, 1673, 1847, 1979, 2153
BfmI CTRYAG 3 cut(s) 985, 1048, 1897
BfrI CTTAAG 1 cut(s) 1319
BfuAI ACCTGC 2 cut(s) 905, 2251
BfuI GTATCC 1 cut(s) 1531
BisI GCNGC 8 cut(s) 48, 69, 87, 90, 691, 822, 1293, 1653
BlpI GCTNAGC 2 cut(s) 195, 2070
BlsI GCNGC 8 cut(s) 49, 70, 88, 91, 692, 823, 1294, 1654
BmcAI AGTACT 1 cut(s) 1229
Bme1390I CCNGG 1 cut(s) 183
Bme18I GGWCC 3 cut(s) 664, 1283, 1619
BmeT110I CYCGRG 1 cut(s) 560
BmgBI CACGTC 1 cut(s) 327
BmgT120I GGNCC 5 cut(s) 342, 664, 673, 1283, 1619
BmiI GGNNCC 7 cut(s) 646, 674, 929, 1520, 1620, 1669, 1794
BmrFI CCNGG 1 cut(s) 183
BmrI ACTGGG 1 cut(s) 1142
BmsI GCATC 3 cut(s) 181, 2191, 2191
BmtI GCTAGC 1 cut(s) 86
BmuI ACTGGG 1 cut(s) 1142
BpmI CTGGAG 2 cut(s) 1084, 1847
Bpu10I CCTNAGC 1 cut(s) 677
Bpu1102I GCTNAGC 2 cut(s) 195, 2070
Bpu14I TTCGAA 1 cut(s) 1784
BpuEI CTTGAG 3 cut(s) 78, 1202, 1272
BsaBI GATNNNNATC 1 cut(s) 1806
BsaI GGTCTC 1 cut(s) 2210
BsaJI CCNNGG 2 cut(s) 652, 1522
BsaWI WCCGGW 2 cut(s) 572, 778
BsaXI ACNNNNNCTCC 2 cut(s) 347, 377
Bsc4I CCNNNNNNNGG 4 cut(s) 579, 910, 1090, 2351
Bse118I RCCGGY 1 cut(s) 731
Bse1I ACTGG 6 cut(s) 667, 904, 1137, 1560, 1864, 2295
Bse21I CCTNAGG 1 cut(s) 1962
Bse3DI GCAATG 3 cut(s) 118, 1394, 1582
Bse8I GATNNNNATC 1 cut(s) 1806
BseBI CCWGG 1 cut(s) 183
BseDI CCNNGG 2 cut(s) 652, 1522
BseGI GGATG 4 cut(s) 236, 715, 1750, 2182
BseJI GATNNNNATC 1 cut(s) 1806
BseLI CCNNNNNNNGG 4 cut(s) 579, 910, 1090, 2351
BseMI GCAATG 3 cut(s) 118, 1394, 1582
BseMII CTCAG 3 cut(s) 209, 1953, 2061
BseNI ACTGG 6 cut(s) 667, 904, 1137, 1560, 1864, 2295
BseRI GAGGAG 3 cut(s) 352, 929, 1511
BseSI GKGCMC 1 cut(s) 1713
BseXI GCAGC 6 cut(s) 76, 80, 98, 702, 833, 1664
Bsh1236I CGCG 1 cut(s) 885
BshFI GGCC 6 cut(s) 47, 343, 675, 1295, 1328, 2125
BshNI GGYRCC 1 cut(s) 644
BsiHKAI GWGCWC 5 cut(s) 387, 587, 994, 1596, 1713
BsiHKCI CYCGRG 1 cut(s) 560
BsiSI CCGG 3 cut(s) 573, 732, 779
BslFI GGGAC 2 cut(s) 313, 1632
BslI CCNNNNNNNGG 4 cut(s) 579, 910, 1090, 2351
BsmAI GTCTC 4 cut(s) 136, 557, 833, 2210
BsmFI GGGAC 2 cut(s) 313, 1632
BsmI GAATGC 2 cut(s) 27, 113
BsnI GGCC 6 cut(s) 47, 343, 675, 1295, 1328, 2125
Bso31I GGTCTC 1 cut(s) 2210
BsoBI CYCGRG 1 cut(s) 560
Bsp119I TTCGAA 1 cut(s) 1784
Bsp1286I GDGCHC 5 cut(s) 387, 587, 994, 1596, 1713
Bsp1407I TGTACA 1 cut(s) 369
Bsp143I GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
Bsp1720I GCTNAGC 2 cut(s) 195, 2070
BspACI CCGC 7 cut(s) 48, 101, 519, 883, 1188, 1292, 1622
BspANI GGCC 6 cut(s) 47, 343, 675, 1295, 1328, 2125
BspCNI CTCAG 3 cut(s) 208, 1954, 2062
BspFNI CGCG 1 cut(s) 885
BspLI GGNNCC 7 cut(s) 646, 674, 929, 1520, 1620, 1669, 1794
BspMI ACCTGC 2 cut(s) 905, 2251
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 4 cut(s) 482, 1662, 1675, 2028
BspQI GCTCTTC 1 cut(s) 1308
BspT104I TTCGAA 1 cut(s) 1784
BspT107I GGYRCC 1 cut(s) 644
BspTI CTTAAG 1 cut(s) 1319
BspTNI GGTCTC 1 cut(s) 2210
BsrDI GCAATG 3 cut(s) 118, 1394, 1582
BsrFI RCCGGY 1 cut(s) 731
BsrGI TGTACA 1 cut(s) 369
BsrI ACTGG 6 cut(s) 667, 904, 1137, 1560, 1864, 2295
BssAI RCCGGY 1 cut(s) 731
BssECI CCNNGG 2 cut(s) 652, 1522
BssMI GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
Bst2UI CCWGG 1 cut(s) 183
Bst4CI ACNGT 2 cut(s) 625, 640
Bst6I CTCTTC 2 cut(s) 1308, 2001
BstAFI CTTAAG 1 cut(s) 1319
BstAPI GCANNNNNTGC 1 cut(s) 1708
BstAUI TGTACA 1 cut(s) 369
BstBI TTCGAA 1 cut(s) 1784
BstC8I GCNNGC 7 cut(s) 84, 649, 733, 786, 853, 2232, 2318
BstDEI CTNAG 4 cut(s) 195, 677, 1962, 2070
BstEII GGTNACC 1 cut(s) 319
BstF5I GGATG 4 cut(s) 236, 715, 1750, 2182
BstFNI CGCG 1 cut(s) 885
BstHHI GCGC 2 cut(s) 717, 887
BstKTI GATC 7 cut(s) 210, 391, 490, 1670, 1804, 2023, 2035
BstMAI GTCTC 4 cut(s) 136, 557, 833, 2210
BstMBI GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
BstNI CCWGG 1 cut(s) 183
BstNSI RCATGY 2 cut(s) 855, 2320
BstPI GGTNACC 1 cut(s) 319
BstSCI CCNGG 1 cut(s) 181
BstSFI CTRYAG 3 cut(s) 985, 1048, 1897
BstSLI GKGCMC 1 cut(s) 1713
BstUI CGCG 1 cut(s) 885
BstV1I GCAGC 6 cut(s) 76, 80, 98, 702, 833, 1664
BstX2I RGATCY 2 cut(s) 487, 1667
BstYI RGATCY 2 cut(s) 487, 1667
Bsu36I CCTNAGG 1 cut(s) 1962
BsuI GTATCC 1 cut(s) 1531
BsuRI GGCC 6 cut(s) 47, 343, 675, 1295, 1328, 2125
BtgZI GCGATG 2 cut(s) 470, 2249
BtrI CACGTC 1 cut(s) 327
BtsCI GGATG 4 cut(s) 236, 715, 1750, 2182
BtsI GCAGTG 2 cut(s) 57, 385
BtsIMutI CAGTG 6 cut(s) 57, 385, 674, 911, 1130, 1874
BveI ACCTGC 2 cut(s) 905, 2251
Cac8I GCNNGC 7 cut(s) 84, 649, 733, 786, 853, 2232, 2318
CfoI GCGC 2 cut(s) 717, 887
Cfr10I RCCGGY 1 cut(s) 731
Cfr13I GGNCC 5 cut(s) 342, 664, 673, 1283, 1619
Csp6I GTAC 3 cut(s) 370, 1228, 1833
CviAII CATG 5 cut(s) 14, 852, 995, 1159, 2317
CviQI GTAC 3 cut(s) 370, 1228, 1833
DdeI CTNAG 4 cut(s) 195, 677, 1962, 2070
DpnI GATC 7 cut(s) 209, 390, 489, 1669, 1803, 2022, 2034
DpnII GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
DraIII CACNNNGTG 1 cut(s) 1136
EaeI YGGCCR 2 cut(s) 45, 1293
Eam1104I CTCTTC 2 cut(s) 1308, 2001
EarI CTCTTC 2 cut(s) 1308, 2001
Eco147I AGGCCT 1 cut(s) 2125
Eco31I GGTCTC 1 cut(s) 2210
Eco32I GATATC 1 cut(s) 958
Eco47I GGWCC 3 cut(s) 664, 1283, 1619
Eco57I CTGAAG 1 cut(s) 1818
Eco81I CCTNAGG 1 cut(s) 1962
Eco88I CYCGRG 1 cut(s) 560
Eco91I GGTNACC 1 cut(s) 319
EcoO109I RGGNCCY 1 cut(s) 673
EcoO65I GGTNACC 1 cut(s) 319
EcoRII CCWGG 1 cut(s) 181
EcoRV GATATC 1 cut(s) 958
FaeI CATG 5 cut(s) 17, 855, 998, 1162, 2320
FalI AAGNNNNNCTT 6 cut(s) 670, 702, 1012, 1044, 1821, 1853
FaqI GGGAC 2 cut(s) 313, 1632
FatI CATG 5 cut(s) 13, 851, 994, 1158, 2316
FauI CCCGC 1 cut(s) 108
Fnu4HI GCNGC 8 cut(s) 48, 69, 87, 90, 691, 822, 1293, 1653
FokI GGATG 4 cut(s) 223, 722, 1757, 2169
Fsp4HI GCNGC 8 cut(s) 48, 69, 87, 90, 691, 822, 1293, 1653
FspBI CTAG 8 cut(s) 83, 603, 953, 1154, 1673, 1847, 1979, 2153
GlaI GCGC 2 cut(s) 716, 886
GluI GCNGC 8 cut(s) 48, 69, 87, 90, 691, 822, 1293, 1653
GsuI CTGGAG 2 cut(s) 1084, 1847
HaeIII GGCC 6 cut(s) 47, 343, 675, 1295, 1328, 2125
HapII CCGG 3 cut(s) 573, 732, 779
HhaI GCGC 2 cut(s) 717, 887
Hin1II CATG 5 cut(s) 17, 855, 998, 1162, 2320
Hin6I GCGC 2 cut(s) 715, 885
HinP1I GCGC 2 cut(s) 715, 885
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HindIII AAGCTT 3 cut(s) 526, 1147, 2056
HinfI GANTC 7 cut(s) 359, 555, 1933, 2011, 2026, 2303, 2323
HpaII CCGG 3 cut(s) 573, 732, 779
HphI GGTGA 6 cut(s) 308, 331, 1373, 2232, 2285, 2294
Hpy166II GTNNAC 6 cut(s) 608, 636, 880, 1561, 1711, 1818
Hpy188I TCNGA 6 cut(s) 415, 656, 1771, 2025, 2211, 2308
Hpy188III TCNNGA 9 cut(s) 205, 330, 491, 536, 1513, 1796, 2030, 2036, 2186
Hpy8I GTNNAC 6 cut(s) 608, 636, 880, 1561, 1711, 1818
Hpy99I CGWCG 1 cut(s) 2002
HpyAV CCTTC 4 cut(s) 408, 1318, 1358, 2273
HpyCH4III ACNGT 2 cut(s) 625, 640
HpyCH4IV ACGT 3 cut(s) 326, 1997, 2256
HpyF3I CTNAG 4 cut(s) 195, 677, 1962, 2070
HpySE526I ACGT 3 cut(s) 326, 1997, 2256
Hsp92II CATG 5 cut(s) 17, 855, 998, 1162, 2320
HspAI GCGC 2 cut(s) 715, 885
KroI GCCGGC 1 cut(s) 731
KroNI GCCGGC 1 cut(s) 733
Kzo9I GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
LguI GCTCTTC 1 cut(s) 1308
LmnI GCTCC 6 cut(s) 590, 772, 1524, 1778, 1921, 2149
Lsp1109I GCAGC 6 cut(s) 76, 80, 98, 702, 833, 1664
LweI GCATC 3 cut(s) 181, 2191, 2191
MaeI CTAG 8 cut(s) 83, 603, 953, 1154, 1673, 1847, 1979, 2153
MaeII ACGT 3 cut(s) 326, 1997, 2256
MalI GATC 7 cut(s) 209, 390, 489, 1669, 1803, 2022, 2034
MboI GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
MboII GAAGA 6 cut(s) 841, 1212, 1325, 1657, 1811, 2018
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 2 cut(s) 487, 1667
MhlI GDGCHC 5 cut(s) 387, 587, 994, 1596, 1713
MlyI GAGTC 3 cut(s) 353, 1942, 2297
MmeI TCCRAC 1 cut(s) 2331
MroNI GCCGGC 1 cut(s) 731
MroXI GAANNNNTTC 1 cut(s) 1229
MseI TTAA 7 cut(s) 477, 747, 977, 1145, 1320, 1470, 2102
MslI CAYNNNNRTG 5 cut(s) 290, 1424, 1506, 1716, 1823
MspA1I CMGCKG 3 cut(s) 89, 519, 1813
MspCI CTTAAG 1 cut(s) 1319
MspI CCGG 3 cut(s) 573, 732, 779
MspR9I CCNGG 1 cut(s) 183
MunI CAATTG 1 cut(s) 1014
Mva1269I GAATGC 2 cut(s) 27, 113
MvaI CCWGG 1 cut(s) 183
MvnI CGCG 1 cut(s) 885
NaeI GCCGGC 1 cut(s) 733
NdeII GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
NgoMIV GCCGGC 1 cut(s) 731
NheI GCTAGC 1 cut(s) 82
NlaIII CATG 5 cut(s) 17, 855, 998, 1162, 2320
NlaIV GGNNCC 7 cut(s) 646, 674, 929, 1520, 1620, 1669, 1794
NmuCI GTSAC 5 cut(s) 319, 481, 806, 1037, 2238
NspI RCATGY 2 cut(s) 855, 2320
NspV TTCGAA 1 cut(s) 1784
OliI CACNNNNGTG 1 cut(s) 1823
PaeI GCATGC 2 cut(s) 855, 2320
PaqCI CACCTGC 1 cut(s) 2251
PceI AGGCCT 1 cut(s) 2125
PciSI GCTCTTC 1 cut(s) 1308
PcsI WCGNNNNNNNCGW 1 cut(s) 1062
PctI GAATGC 2 cut(s) 27, 113
PdiI GCCGGC 1 cut(s) 733
PdmI GAANNNNTTC 1 cut(s) 1229
PfeI GAWTC 4 cut(s) 555, 2011, 2026, 2323
PflFI GACNNNGTC 1 cut(s) 325
PkrI GCNGC 8 cut(s) 49, 70, 88, 91, 692, 823, 1294, 1654
PleI GAGTC 3 cut(s) 353, 1941, 2297
PpsI GAGTC 3 cut(s) 353, 1941, 2297
PshBI ATTAAT 1 cut(s) 1470
PsiI TTATAA 2 cut(s) 1169, 2291
Psp6I CCWGG 1 cut(s) 181
PspEI GGTNACC 1 cut(s) 319
PspGI CCWGG 1 cut(s) 181
PspN4I GGNNCC 7 cut(s) 646, 674, 929, 1520, 1620, 1669, 1794
PspPI GGNCC 5 cut(s) 342, 664, 673, 1283, 1619
PsuI RGATCY 2 cut(s) 487, 1667
PsyI GACNNNGTC 1 cut(s) 325
PvuII CAGCTG 2 cut(s) 89, 1813
RsaI GTAC 3 cut(s) 371, 1229, 1834
RsaNI GTAC 3 cut(s) 370, 1228, 1833
RseI CAYNNNNRTG 5 cut(s) 290, 1424, 1506, 1716, 1823
SapI GCTCTTC 1 cut(s) 1308
SaqAI TTAA 7 cut(s) 477, 747, 977, 1145, 1320, 1470, 2102
SatI GCNGC 8 cut(s) 48, 69, 87, 90, 691, 822, 1293, 1653
Sau3AI GATC 7 cut(s) 207, 388, 487, 1667, 1801, 2020, 2032
Sau96I GGNCC 5 cut(s) 342, 664, 673, 1283, 1619
ScaI AGTACT 1 cut(s) 1229
SchI GAGTC 3 cut(s) 353, 1942, 2297
ScrFI CCNGG 1 cut(s) 183
SduI GDGCHC 5 cut(s) 387, 587, 994, 1596, 1713
SfaNI GCATC 3 cut(s) 181, 2191, 2191
SfcI CTRYAG 3 cut(s) 985, 1048, 1897
SfuI TTCGAA 1 cut(s) 1784
SinI GGWCC 3 cut(s) 664, 1283, 1619
SmiMI CAYNNNNRTG 5 cut(s) 290, 1424, 1506, 1716, 1823
SmlI CTYRAG 4 cut(s) 93, 1217, 1287, 1319
SmoI CTYRAG 4 cut(s) 93, 1217, 1287, 1319
SphI GCATGC 2 cut(s) 855, 2320
SseBI AGGCCT 1 cut(s) 2125
SsiI CCGC 7 cut(s) 48, 101, 519, 883, 1188, 1292, 1622
SspI AATATT 1 cut(s) 619
SspMI CTAG 8 cut(s) 83, 603, 953, 1154, 1673, 1847, 1979, 2153
StuI AGGCCT 1 cut(s) 2125
StyD4I CCNGG 1 cut(s) 181
TaaI ACNGT 2 cut(s) 625, 640
TaiI ACGT 3 cut(s) 329, 2000, 2259
TaqI TCGA 3 cut(s) 387, 1341, 1784
TaqII GACCGA 1 cut(s) 2234
TatI WGTACW 2 cut(s) 369, 1227
TauI GCSGC 2 cut(s) 50, 1295
TfiI GAWTC 4 cut(s) 555, 2011, 2026, 2323
Tru1I TTAA 7 cut(s) 477, 747, 977, 1145, 1320, 1470, 2102
Tru9I TTAA 7 cut(s) 477, 747, 977, 1145, 1320, 1470, 2102
TscAI CASTG 6 cut(s) 57, 385, 674, 911, 1137, 1881
TseFI GTSAC 5 cut(s) 319, 481, 806, 1037, 2238
TseI GCWGC 6 cut(s) 68, 86, 89, 690, 821, 1652
Tsp45I GTSAC 5 cut(s) 319, 481, 806, 1037, 2238
TspGWI ACGGA 5 cut(s) 135, 424, 577, 677, 1296
TspRI CASTG 6 cut(s) 57, 385, 674, 911, 1137, 1881
Tth111I GACNNNGTC 1 cut(s) 325
Vha464I CTTAAG 1 cut(s) 1319
VneI GTGCAC 1 cut(s) 1709
VpaK11BI GGWCC 3 cut(s) 664, 1283, 1619
VspI ATTAAT 1 cut(s) 1470
XapI RAATTY 5 cut(s) 542, 973, 1125, 1273, 2285
XceI RCATGY 2 cut(s) 855, 2320
XcmI CCANNNNNNNNNTGG 1 cut(s) 289
XmnI GAANNNNTTC 1 cut(s) 1229
XspI CTAG 8 cut(s) 83, 603, 953, 1154, 1673, 1847, 1979, 2153
ZrmI AGTACT 1 cut(s) 1229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.