Rorug06G0055500

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000791
Physical Location & Seq
Reverse (-)
7617711 .. 7623872
6162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0055500.1

Sequence Viewer

Length: 1866 bp
ATGAAGTTTATGAAACTTGGATCAAAGCCGGATTCCTTTCAGACTGATGGCAATAATGTTAGGTATGTGGCAGCTGATTTGGAAACAGATATCATCGTTAATGTTGGAGATTCAAAGTTTTATCTACACAAGTTTCCTCTTCTATCAAAGAGTGCCCGCTTACAGAAATTAGCAAACACCAATGAGTCGAAACCTTTGGAAATTCACATTTCAGACATTCCTGGTGGCCCTGCTGCATTTGAGATATGTGCCAAGTTCTGTTATGGCATGACTGTCACCCTGAATGCTTACAATGTTGTTGTGTCTCGATGTGCGGCTGAGTATATGGGAATGCACGAGTCTATTGAGAAAGGAAATCTCATATACAAGATTGATGTGTTTCTTAACTCTAGCATTTTCCGCAGCTGGAAGGATTCAATCATTGTTCTTCAGACTACAAAGTCTCTTTTGCCGATATCTGAGGACCTGAAGTTGGTCAGCCAGTGCATTGATTCGATAGCTACCAAGGCCTGTGTCGATGTTTCAAAAGTTGACTGGTCCTATACCTATAACCGGAAGAAACTTGCAGAGGAAAATGGGAACGATCCAAATTGGAATGGTGTCAGAAACCGTCAAGTTCCAAAGGATTGGTGGGTGGAGGAATTATGTGAGCTTGAGATTGATTTGTTTAAGCGTGTTCTTATGAGTATTAAAACCAAAGCAGTACTTTCTGGTGAAGTGATCGGAGAAGCCTTGAAAGCTTATGCTTACAGAAGGTTGCCAGGTTTCAGCAAAGGTATGATCCAGAGTGGAGATATGGCAAAGCATCGATCAACAGTGGATGCAATTGTCTGGCTGTTGCCTGCAGAGAAAGGCAGCATCTCTTGTAGTTTCTTGCTCAAATTGTTAAAAGCAGCTATATATGTGAACTCTGGAGAAACGACCAAGGATGAGATGGTAAAGAGAATAGGACAGCAACTGGAGGAGGCTTCAGTAAATGATCTTTTGATACGAGCAGCAGAAGGAGAAGCTACTATATATGATGTTAGTGCAGTTAAAAAAATAGTAGAAGAGTTTCTAAAGAAAGATCAGACTGCAGAGATTCAATCATTAGAAGAGGGCCATGAGATTCAGGAGGAGAGGAGGCCAGGGATCTTGTCAGATGCTTCTAAGTTGATGGTGGCAAAACTGATAGATGGGTATCTTGCTGAAATTTCAAAGGATCCGAACCTACCCTTGTCCAAGTTTGTCGATCTTGCAGAAATGGTGTCAGGTTTCTCTCGCCCTGCTCATGATGGGCTTTACCGAGCCATTGACATGTTTCTCAAGGAGCACCCGGGGATTAGTAAGAGTGAGAGAAAGAGGATCTGCAAGCTGATGGACTGCAAAAAGCTGTCAGTTGATGCCTGCATGCACGCTGTGCAAAATGAGAGACTCCCGTTGCGCGTAGTTGTGCAGGTACTCTTTTTTGAGCAAGTCAGGGCTGCTGCTTCATCAGGCAGTAGCACTCCCGACTTACCTAAAGGCATGAAGGATTTAAACAGTGGTTCTCATGGGAGCTCAAGGTCTGCAACAACTAACACAGAGGAGGATTGGGATGCAGTTGCGTCTGCTGAGGAGCTTAGGGCCCTGAAAGGAGAGTTAGCTTCTTTAAGATTGGCCAGTGGTGAGAGGAATGGAGATGGTAAAAGCAATGTTGACAAGGCTGCAGTTAGTAAAATGAGAAGGTTACTCAATTCAAAGAAGGTCTTTGCAAAGCTCTTTTCAAGCAAAGGGGGACAAGGCGAGAATAGTGGCTCAGATTCATCCGAGAGTCTTGGTTCTGCAAATCCTGAAGAGGCTGCTAAGTCCACACCTTCCAGAAATCGGAGGCATTCGGTTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 Pkinase_Tyr

Protein Analysis

621

Amino Acids

68.57

Weight (kDa)

8.14

Isoelectric Point (pI)

39.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 209 - 463 8.6e-91 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 439
Acc36I ACCTGC 1 cut(s) 1426
AccII CGCG 1 cut(s) 1425
AciI CCGC 3 cut(s) 157, 314, 400
AclWI GGATC 7 cut(s) 28, 578, 775, 1139, 1196, 1209, 1352
AcoI YGGCCR 1 cut(s) 1638
AcsI RAATTY 2 cut(s) 201, 1191
AcuI CTGAAG 4 cut(s) 413, 488, 954, 1833
AdeI CACNNNGTG 1 cut(s) 1399
AfaI GTAC 2 cut(s) 705, 1440
AfiI CCNNNNNNNGG 3 cut(s) 472, 552, 1845
AflIII ACRYGT 1 cut(s) 1296
AgsI TTSAA 8 cut(s) 114, 417, 525, 736, 1085, 1197, 1719, 1746
AjnI CCWGG 3 cut(s) 220, 760, 1126
Alw21I GWGCWC 2 cut(s) 1314, 1541
Alw26I GTCTC 3 cut(s) 309, 447, 1405
AlwI GGATC 7 cut(s) 28, 578, 775, 1139, 1196, 1209, 1352
AlwNI CAGNNNCTG 1 cut(s) 958
Ama87I CYCGRG 1 cut(s) 1315
AoxI GGCC 6 cut(s) 226, 507, 1099, 1124, 1605, 1638
ApaI GGGCCC 1 cut(s) 1609
ApoI RAATTY 2 cut(s) 201, 1191
Asp700I GAANNNNTTC 1 cut(s) 1053
AspLEI GCGC 1 cut(s) 1425
AspS9I GGNCC 6 cut(s) 227, 463, 537, 1099, 1605, 1606
AsuC2I CCSGG 2 cut(s) 1316, 1317
AsuHPI GGTGA 3 cut(s) 268, 725, 1658
AvaI CYCGRG 1 cut(s) 1315
AvaII GGWCC 2 cut(s) 463, 537
BaeGI GKGCMC 2 cut(s) 157, 1609
BalI TGGCCA 1 cut(s) 1640
BamHI GGATCC 1 cut(s) 1201
BanII GRGCYC 2 cut(s) 1541, 1609
BauI CACGAG 1 cut(s) 335
Bbv12I GWGCWC 2 cut(s) 1314, 1541
BbvCI CCTCAGC 1 cut(s) 1593
BccI CCATC 7 cut(s) 41, 928, 1150, 1169, 1268, 1351, 1655
BciT130I CCWGG 3 cut(s) 222, 762, 1128
BcnI CCSGG 2 cut(s) 1316, 1317
BcoDI GTCTC 3 cut(s) 309, 447, 1405
BfaI CTAG 1 cut(s) 390
BfmI CTRYAG 3 cut(s) 843, 1074, 1686
BfuAI ACCTGC 1 cut(s) 1426
BmcAI AGTACT 1 cut(s) 705
Bme1390I CCNGG 5 cut(s) 222, 762, 1128, 1316, 1317
Bme18I GGWCC 2 cut(s) 463, 537
BmeT110I CYCGRG 1 cut(s) 1315
BmgT120I GGNCC 6 cut(s) 227, 463, 537, 1099, 1605, 1606
BmiI GGNNCC 2 cut(s) 1203, 1607
BmrFI CCNGG 5 cut(s) 222, 762, 1128, 1316, 1317
BmsI GCATC 6 cut(s) 811, 814, 867, 1132, 1372, 1567
BpmI CTGGAG 2 cut(s) 933, 980
Bpu10I CCTNAGC 2 cut(s) 1593, 1601
BpuEI CTTGAG 3 cut(s) 674, 1289, 1525
BpuMI CCSGG 2 cut(s) 1316, 1317
Bsa29I ATCGAT 1 cut(s) 808
BsaBI GATNNNNATC 1 cut(s) 1179
BsaJI CCNNGG 5 cut(s) 504, 924, 1127, 1315, 1316
BsaWI WCCGGW 1 cut(s) 552
Bsc4I CCNNNNNNNGG 3 cut(s) 472, 552, 1845
Bse1I ACTGG 4 cut(s) 481, 539, 963, 1641
Bse3DI GCAATG 1 cut(s) 1678
Bse8I GATNNNNATC 1 cut(s) 1179
BseBI CCWGG 3 cut(s) 222, 762, 1128
BseCI ATCGAT 1 cut(s) 808
BseDI CCNNGG 5 cut(s) 504, 924, 1127, 1315, 1316
BseGI GGATG 4 cut(s) 826, 934, 1582, 1784
BseJI GATNNNNATC 1 cut(s) 1179
BseLI CCNNNNNNNGG 3 cut(s) 472, 552, 1845
BseMI GCAATG 1 cut(s) 1678
BseMII CTCAG 4 cut(s) 309, 450, 1584, 1791
BseNI ACTGG 4 cut(s) 481, 539, 963, 1641
BseRI GAGGAG 5 cut(s) 977, 1130, 1135, 1580, 1610
BseSI GKGCMC 2 cut(s) 157, 1609
BsgI GTGCAG 2 cut(s) 1050, 1454
Bsh1236I CGCG 1 cut(s) 1425
BshFI GGCC 6 cut(s) 228, 509, 1101, 1126, 1607, 1640
BshVI ATCGAT 1 cut(s) 808
BsiHKAI GWGCWC 2 cut(s) 1314, 1541
BsiHKCI CYCGRG 1 cut(s) 1315
BsiSI CCGG 3 cut(s) 29, 553, 1316
BslFI GGGAC 1 cut(s) 1770
BslI CCNNNNNNNGG 3 cut(s) 472, 552, 1845
BsmAI GTCTC 3 cut(s) 309, 447, 1405
BsmFI GGGAC 1 cut(s) 1770
BsmI GAATGC 3 cut(s) 289, 336, 1852
BsnI GGCC 6 cut(s) 228, 509, 1101, 1126, 1607, 1640
BsoBI CYCGRG 1 cut(s) 1315
Bsp120I GGGCCC 1 cut(s) 1605
Bsp1286I GDGCHC 4 cut(s) 157, 1314, 1541, 1609
BspACI CCGC 3 cut(s) 157, 314, 400
BspANI GGCC 6 cut(s) 228, 509, 1101, 1126, 1607, 1640
BspCNI CTCAG 4 cut(s) 310, 451, 1585, 1790
BspDI ATCGAT 1 cut(s) 808
BspFNI CGCG 1 cut(s) 1425
BspHI TCATGA 1 cut(s) 1270
BspLI GGNNCC 2 cut(s) 1203, 1607
BspMAI CTGCAG 3 cut(s) 847, 1078, 1690
BspMI ACCTGC 1 cut(s) 1426
BspPI GGATC 7 cut(s) 28, 578, 775, 1139, 1196, 1209, 1352
BsrDI GCAATG 1 cut(s) 1678
BsrI ACTGG 4 cut(s) 481, 539, 963, 1641
BssECI CCNNGG 5 cut(s) 504, 924, 1127, 1315, 1316
BssSI CACGAG 1 cut(s) 335
BssT1I CCWWGG 2 cut(s) 504, 924
Bst2BI CACGAG 1 cut(s) 335
Bst2UI CCWGG 3 cut(s) 222, 762, 1128
Bst4CI ACNGT 4 cut(s) 274, 611, 817, 1523
Bst6I CTCTTC 4 cut(s) 144, 1044, 1089, 1809
BstAPI GCANNNNNTGC 1 cut(s) 1399
BstC8I GCNNGC 6 cut(s) 157, 843, 1352, 1387, 1391, 1395
BstDEI CTNAG 8 cut(s) 318, 459, 1149, 1593, 1601, 1777, 1824, 1863
BstF5I GGATG 4 cut(s) 826, 934, 1582, 1784
BstFNI CGCG 1 cut(s) 1425
BstHHI GCGC 1 cut(s) 1425
BstMAI GTCTC 3 cut(s) 309, 447, 1405
BstMWI GCNNNNNNNGC 4 cut(s) 399, 506, 737, 1399
BstNI CCWGG 3 cut(s) 222, 762, 1128
BstNSI RCATGY 2 cut(s) 1300, 1393
BstSCI CCNGG 5 cut(s) 220, 760, 1126, 1314, 1315
BstSFI CTRYAG 3 cut(s) 843, 1074, 1686
BstSLI GKGCMC 2 cut(s) 157, 1609
BstUI CGCG 1 cut(s) 1425
BstX2I RGATCY 3 cut(s) 1131, 1201, 1344
BstXI CCANNNNNNTGG 1 cut(s) 627
BstYI RGATCY 3 cut(s) 1131, 1201, 1344
Bsu15I ATCGAT 1 cut(s) 808
BsuRI GGCC 6 cut(s) 228, 509, 1101, 1126, 1607, 1640
BsuTUI ATCGAT 1 cut(s) 808
BtsCI GGATG 4 cut(s) 826, 934, 1582, 1784
BtsIMutI CAGTG 4 cut(s) 488, 822, 1528, 1648
BveI ACCTGC 1 cut(s) 1426
Cac8I GCNNGC 6 cut(s) 157, 843, 1352, 1387, 1391, 1395
CaiI CAGNNNCTG 1 cut(s) 958
CciI TCATGA 1 cut(s) 1270
CfoI GCGC 1 cut(s) 1425
Cfr13I GGNCC 6 cut(s) 227, 463, 537, 1099, 1605, 1606
Cfr9I CCCGGG 1 cut(s) 1315
ClaI ATCGAT 1 cut(s) 808
CseI GACGC 1 cut(s) 1575
Csp6I GTAC 2 cut(s) 704, 1439
CviAII CATG 7 cut(s) 268, 1103, 1271, 1297, 1390, 1507, 1532
CviQI GTAC 2 cut(s) 704, 1439
DdeI CTNAG 8 cut(s) 318, 459, 1149, 1593, 1601, 1777, 1824, 1863
DraI TTTAAA 1 cut(s) 1518
DraIII CACNNNGTG 1 cut(s) 1399
DrdI GACNNNNNNGTC 1 cut(s) 439
DseDI GACNNNNNNGTC 1 cut(s) 439
EaeI YGGCCR 1 cut(s) 1638
Eam1104I CTCTTC 4 cut(s) 144, 1044, 1089, 1809
EarI CTCTTC 4 cut(s) 144, 1044, 1089, 1809
Ecl136II GAGCTC 1 cut(s) 1539
Eco130I CCWWGG 2 cut(s) 504, 924
Eco147I AGGCCT 1 cut(s) 509
Eco24I GRGCYC 2 cut(s) 1541, 1609
Eco32I GATATC 2 cut(s) 91, 456
Eco47I GGWCC 2 cut(s) 463, 537
Eco53kI GAGCTC 1 cut(s) 1539
Eco57I CTGAAG 4 cut(s) 413, 488, 954, 1833
Eco88I CYCGRG 1 cut(s) 1315
EcoICRI GAGCTC 1 cut(s) 1539
EcoO109I RGGNCCY 3 cut(s) 463, 1605, 1606
EcoRII CCWGG 3 cut(s) 220, 760, 1126
EcoRV GATATC 2 cut(s) 91, 456
EcoT14I CCWWGG 2 cut(s) 504, 924
EcoT38I GRGCYC 2 cut(s) 1541, 1609
ErhI CCWWGG 2 cut(s) 504, 924
FaeI CATG 7 cut(s) 271, 1106, 1274, 1300, 1393, 1510, 1535
FalI AAGNNNNNCTT 4 cut(s) 690, 722, 1712, 1744
FaqI GGGAC 1 cut(s) 1770
FatI CATG 7 cut(s) 267, 1102, 1270, 1296, 1389, 1506, 1531
FauI CCCGC 1 cut(s) 164
FokI GGATG 4 cut(s) 833, 941, 1589, 1771
FriOI GRGCYC 2 cut(s) 1541, 1609
FspBI CTAG 1 cut(s) 390
GlaI GCGC 1 cut(s) 1424
GsuI CTGGAG 2 cut(s) 933, 980
HaeIII GGCC 6 cut(s) 228, 509, 1101, 1126, 1607, 1640
HapII CCGG 3 cut(s) 29, 553, 1316
HgaI GACGC 1 cut(s) 1575
HhaI GCGC 1 cut(s) 1425
Hin1II CATG 7 cut(s) 271, 1106, 1274, 1300, 1393, 1510, 1535
Hin6I GCGC 1 cut(s) 1423
HinP1I GCGC 1 cut(s) 1423
HincII GTYRAC 2 cut(s) 532, 1678
HindII GTYRAC 2 cut(s) 532, 1678
HindIII AAGCTT 1 cut(s) 738
HpaII CCGG 3 cut(s) 29, 553, 1316
HphI GGTGA 3 cut(s) 268, 725, 1658
Hpy166II GTNNAC 4 cut(s) 532, 907, 1678, 1830
Hpy188III TCNNGA 8 cut(s) 306, 784, 912, 1112, 1271, 1490, 1811, 1839
Hpy8I GTNNAC 4 cut(s) 532, 907, 1678, 1830
HpyAV CCTTC 7 cut(s) 403, 747, 995, 1504, 1698, 1717, 1845
HpyCH4III ACNGT 4 cut(s) 274, 611, 817, 1523
HpyF10VI GCNNNNNNNGC 4 cut(s) 399, 506, 737, 1399
HpyF3I CTNAG 8 cut(s) 318, 459, 1149, 1593, 1601, 1777, 1824, 1863
Hsp92II CATG 7 cut(s) 271, 1106, 1274, 1300, 1393, 1510, 1535
HspAI GCGC 1 cut(s) 1423
LmnI GCTCC 3 cut(s) 1309, 1536, 1597
LweI GCATC 6 cut(s) 811, 814, 867, 1132, 1372, 1567
MaeI CTAG 1 cut(s) 390
MaeIII GTNAC 2 cut(s) 274, 1707
MboII GAAGA 6 cut(s) 131, 419, 568, 1061, 1106, 1826
MfeI CAATTG 1 cut(s) 825
MflI RGATCY 3 cut(s) 1131, 1201, 1344
MhlI GDGCHC 4 cut(s) 157, 1314, 1541, 1609
MlsI TGGCCA 1 cut(s) 1640
MluCI AATT 8 cut(s) 167, 201, 589, 641, 825, 881, 1191, 1714
MluNI TGGCCA 1 cut(s) 1640
MlyI GAGTC 4 cut(s) 194, 347, 1407, 1801
MmeI TCCRAC 1 cut(s) 85
Mox20I TGGCCA 1 cut(s) 1640
MroXI GAANNNNTTC 1 cut(s) 1053
MscI TGGCCA 1 cut(s) 1640
MseI TTAA 8 cut(s) 99, 384, 669, 690, 887, 1035, 1517, 1631
MslI CAYNNNNRTG 1 cut(s) 1295
Msp20I TGGCCA 1 cut(s) 1640
MspA1I CMGCKG 2 cut(s) 74, 405
MspI CCGG 3 cut(s) 29, 553, 1316
MspR9I CCNGG 5 cut(s) 222, 762, 1128, 1316, 1317
MunI CAATTG 1 cut(s) 825
Mva1269I GAATGC 3 cut(s) 289, 336, 1852
MvaI CCWGG 3 cut(s) 222, 762, 1128
MvnI CGCG 1 cut(s) 1425
MwoI GCNNNNNNNGC 4 cut(s) 399, 506, 737, 1399
NciI CCSGG 2 cut(s) 1316, 1317
NlaIII CATG 7 cut(s) 271, 1106, 1274, 1300, 1393, 1510, 1535
NlaIV GGNNCC 2 cut(s) 1203, 1607
NmuCI GTSAC 1 cut(s) 274
NspI RCATGY 2 cut(s) 1300, 1393
PaeI GCATGC 1 cut(s) 1393
PagI TCATGA 1 cut(s) 1270
PceI AGGCCT 1 cut(s) 509
PciI ACATGT 1 cut(s) 1296
PctI GAATGC 3 cut(s) 289, 336, 1852
PdmI GAANNNNTTC 1 cut(s) 1053
PfeI GAWTC 7 cut(s) 32, 110, 413, 491, 1081, 1108, 1781
PleI GAGTC 4 cut(s) 193, 346, 1407, 1800
PpsI GAGTC 4 cut(s) 193, 346, 1407, 1800
PpuMI RGGWCCY 1 cut(s) 463
PscI ACATGT 1 cut(s) 1296
Psp124BI GAGCTC 1 cut(s) 1541
Psp5II RGGWCCY 1 cut(s) 463
Psp6I CCWGG 3 cut(s) 220, 760, 1126
PspGI CCWGG 3 cut(s) 220, 760, 1126
PspN4I GGNNCC 2 cut(s) 1203, 1607
PspOMI GGGCCC 1 cut(s) 1605
PspPI GGNCC 6 cut(s) 227, 463, 537, 1099, 1605, 1606
PspPPI RGGWCCY 1 cut(s) 463
PstI CTGCAG 3 cut(s) 847, 1078, 1690
PstNI CAGNNNCTG 1 cut(s) 958
PsuI RGATCY 3 cut(s) 1131, 1201, 1344
PvuII CAGCTG 2 cut(s) 74, 405
RsaI GTAC 2 cut(s) 705, 1440
RsaNI GTAC 2 cut(s) 704, 1439
RseI CAYNNNNRTG 1 cut(s) 1295
SacI GAGCTC 1 cut(s) 1541
SaqAI TTAA 8 cut(s) 99, 384, 669, 690, 887, 1035, 1517, 1631
Sau96I GGNCC 6 cut(s) 227, 463, 537, 1099, 1605, 1606
ScaI AGTACT 1 cut(s) 705
SchI GAGTC 4 cut(s) 194, 347, 1407, 1801
ScrFI CCNGG 5 cut(s) 222, 762, 1128, 1316, 1317
SduI GDGCHC 4 cut(s) 157, 1314, 1541, 1609
SfaNI GCATC 6 cut(s) 811, 814, 867, 1132, 1372, 1567
SfcI CTRYAG 3 cut(s) 843, 1074, 1686
SinI GGWCC 2 cut(s) 463, 537
SmaI CCCGGG 1 cut(s) 1317
SmiMI CAYNNNNRTG 1 cut(s) 1295
SmlI CTYRAG 3 cut(s) 653, 1304, 1540
SmoI CTYRAG 3 cut(s) 653, 1304, 1540
SphI GCATGC 1 cut(s) 1393
Sse9I AATT 8 cut(s) 167, 201, 589, 641, 825, 881, 1191, 1714
SseBI AGGCCT 1 cut(s) 509
SsiI CCGC 3 cut(s) 157, 314, 400
SspMI CTAG 1 cut(s) 390
SstI GAGCTC 1 cut(s) 1541
StuI AGGCCT 1 cut(s) 509
StyD4I CCNGG 5 cut(s) 220, 760, 1126, 1314, 1315
StyI CCWWGG 2 cut(s) 504, 924
TaaI ACNGT 4 cut(s) 274, 611, 817, 1523
TaqI TCGA 6 cut(s) 188, 307, 494, 516, 808, 1230
TasI AATT 8 cut(s) 167, 201, 589, 641, 825, 881, 1191, 1714
TatI WGTACW 1 cut(s) 703
TauI GCSGC 1 cut(s) 317
TfiI GAWTC 7 cut(s) 32, 110, 413, 491, 1081, 1108, 1781
Tru1I TTAA 8 cut(s) 99, 384, 669, 690, 887, 1035, 1517, 1631
Tru9I TTAA 8 cut(s) 99, 384, 669, 690, 887, 1035, 1517, 1631
TscAI CASTG 4 cut(s) 488, 822, 1528, 1648
TseFI GTSAC 1 cut(s) 274
Tsp45I GTSAC 1 cut(s) 274
TspDTI ATGAA 5 cut(s) 17, 26, 1461, 1523, 1773
TspMI CCCGGG 1 cut(s) 1315
TspRI CASTG 4 cut(s) 488, 822, 1528, 1648
VpaK11BI GGWCC 2 cut(s) 463, 537
XapI RAATTY 2 cut(s) 201, 1191
XceI RCATGY 2 cut(s) 1300, 1393
XcmI CCANNNNNNNNNTGG 2 cut(s) 627, 931
XmaI CCCGGG 1 cut(s) 1315
XmnI GAANNNNTTC 1 cut(s) 1053
XspI CTAG 1 cut(s) 390
ZrmI AGTACT 1 cut(s) 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.