Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0000791

Physical Location & Seq

Genomic Coordinates Forward (+)

10424612 .. 10429816

Gene Structure 5205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G071200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 885 bp

ATGTCAGAATCCAATCACCAGAACTCAATGTATGGCTCAGGAGGAGCCCCGCAGAGTAACCAAGTTGAGGAACAAGAAGACGACGTTGAAGAGTCCATAGACAACCCTCACATACGCTTCGAAGATAGTAGCGCCATTCCTCCCAATCCACTGTACCTTACCAGCTCAGAATACCCTCCGGCGGCGGCCACGAACGGCGGCTCTGATCAGCTTACGCTGTCGTTTCAGGGCGAGGTTTACGTCTTCGACGAAGTTTCTCCTGATAAGGTGCAGGCCGTACTACTACTTTTGGGCGGATATGAAATCCCTTCTGGCATTCCTTCAATGGGGCCGGTTCCTCTTAACCAGCAAGGTATGAATGACTTACCTGTAAAGCCAATTCAACCACAAAGAGCTGCATCTTTAAGTCGGTTTCGTGAGAAAAGAAAAGAACGTTGTTTTGATAAGAAAATCCGTTACACTGTGCGAAAAGAAGTTGCACTCAGAATGCAGCGTAAGAAGGGTCAGTTTACATCATCCAAGGCTAGTTCTGATGATGGGGGCCCTGCTTCATCTGGTGCAACACAGGGCTCTGGACAAGATGAGAGCATGCAGGAAACTTCGTGCATGCACTGTGGGATAAGCTCAAAATCAACTCCAATGATGCGTCGTGGGCCAGCAGGTCCAAGGACCCTATGCAATGCATGTGGGCTCAAGTGGGCTAACAAGGGAGTTCTAACAGGTGGTCCTAAGGTTTCAAATATAGGTATGCAGGATCCTTCTGCAAAGGGAATTGAACAGGGTGATGGCGAAGCTAAAGACTCAGTTGCTATAACCATGGGTGCCAACATCGCCCCTTCCCCTAATGGTGACAACTCAACCATGACTGTGGACAGGAATTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT GATA tify

Protein Analysis

295

Amino Acids

31.4

Weight (kDa)

5.39

Isoelectric Point (pI)

52.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51600 AT1G51600 AT3G21175 AT3G21175 AT3G21175
fragaria_vesca	FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_2g11520 FvH4_5g34490
malus_domestica	MD05G1048600.v1.1 MD08G1200900.v1.1 MD09G1160800.v1.1 MD10G1055000.v1.1 MD15G1387800.v1.1
prunus_persica	Prupe.1G534400_v2.0.a1 Prupe.3G019800_v2.0.a1 Prupe.3G019800_v2.0.a1 Prupe.3G019800_v2.0.a1 Prupe.3G019800_v2.0.a1 Prupe.3G019800_v2.0.a1 Prupe.8G071200_v2.0.a1 Prupe.8G071200_v2.0.a1 Prupe.8G071200_v2.0.a1 Prupe.8G071300_v2.0.a1 Prupe.8G071300_v2.0.a1 Prupe.8G071300_v2.0.a1 Prupe.8G071300_v2.0.a1
pyrus_communis	pycom05g04020 pycom08g17450 pycom09g07940 pycom10g04200 pycom15g34810
rosa_chinensis	RchiOBHm_Chr6g0270541 RchiOBHm_Chr7g0235131
rosa_laevigata	RLG00000001180 RLG00000013779
rosa_multiflora	Rmu_co8229271.1_g000001 Rmu_sc0002239.1_g000019
rosa_roxburghii	Rroxscaffold_3G00226260 Rroxscaffold_7G00197750 Rroxscaffold_7G00197830
rosa_rugosa	Rorug06G0055500 Rorug06G0055500 Rorug07G0287900 Rorug07G0288000 Rorug07G0288100
rosa_samantha	Rh6AG174600 Rh6BG177800 Rh6CG173800 Rh6DG166200 Rh7AG442800 Rh7BG415400 Rh7CG463600 Rh7DG432500
rosa_wichuraiana	Rw6G014850 Rw6G014880 Rw7G036810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	650
AccB1I	GGYRCC	1 cut(s)	821
AciI	CCGC	5 cut(s)	50, 182, 185, 198, 294
AclI	AACGTT	1 cut(s)	433
AclWI	GGATC	2 cut(s)	749, 762
AcoI	YGGCCR	1 cut(s)	186
AcsI	RAATTY	1 cut(s)	877
AfaI	GTAC	2 cut(s)	155, 279
AfiI	CCNNNNNNNGG	3 cut(s)	67, 181, 326
AgsI	TTSAA	5 cut(s)	89, 324, 383, 738, 776
AluBI	AGCT	5 cut(s)	165, 211, 395, 624, 794
AluI	AGCT	5 cut(s)	165, 211, 395, 624, 794
AlwI	GGATC	2 cut(s)	749, 762
AoxI	GGCC	5 cut(s)	186, 273, 329, 541, 653
ApaI	GGGCCC	1 cut(s)	545
ApeKI	GCWGC	2 cut(s)	395, 490
ApoI	RAATTY	1 cut(s)	877
AspLEI	GCGC	1 cut(s)	134
AspS9I	GGNCC	7 cut(s)	329, 541, 542, 653, 662, 669, 725
AsuHPI	GGTGA	3 cut(s)	8, 794, 860
AsuII	TTCGAA	1 cut(s)	120
AvaII	GGWCC	3 cut(s)	662, 669, 725
AxyI	CCTNAGG	1 cut(s)	729
BaeGI	GKGCMC	1 cut(s)	545
BamHI	GGATCC	1 cut(s)	754
BanI	GGYRCC	1 cut(s)	821
BanII	GRGCYC	4 cut(s)	49, 545, 572, 693
BbsI	GAAGAC	2 cut(s)	84, 235
BbvI	GCAGC	2 cut(s)	382, 502
BccI	CCATC	2 cut(s)	530, 779
BceAI	ACGGC	2 cut(s)	211, 260
BclI	TGATCA	1 cut(s)	205
BfaI	CTAG	1 cut(s)	525
BfoI	RGCGCY	1 cut(s)	135
BfuAI	ACCTGC	1 cut(s)	650
BisI	GCNGC	5 cut(s)	183, 186, 199, 396, 491
BlsI	GCNGC	5 cut(s)	184, 187, 200, 397, 492
Bme18I	GGWCC	3 cut(s)	662, 669, 725
BmgT120I	GGNCC	7 cut(s)	329, 541, 542, 653, 662, 669, 725
BmiI	GGNNCC	8 cut(s)	46, 330, 336, 542, 543, 671, 756, 823
BmsI	GCATC	2 cut(s)	407, 633
BpiI	GAAGAC	2 cut(s)	84, 235
Bpu10I	CCTNAGC	1 cut(s)	37
Bpu14I	TTCGAA	1 cut(s)	120
BpuEI	CTTGAG	1 cut(s)	677
BsaJI	CCNNGG	3 cut(s)	519, 665, 816
Bsc4I	CCNNNNNNNGG	3 cut(s)	67, 181, 326
Bse118I	RCCGGY	1 cut(s)	331
Bse21I	CCTNAGG	1 cut(s)	729
Bse3DI	GCAATG	1 cut(s)	685
BseDI	CCNNGG	3 cut(s)	519, 665, 816
BseGI	GGATG	1 cut(s)	515
BseLI	CCNNNNNNNGG	3 cut(s)	67, 181, 326
BseMI	GCAATG	1 cut(s)	685
BseMII	CTCAG	4 cut(s)	51, 180, 496, 816
BseRI	GAGGAG	1 cut(s)	57
BseSI	GKGCMC	1 cut(s)	545
BseXI	GCAGC	2 cut(s)	382, 502
BsgI	GTGCAG	1 cut(s)	290
BshFI	GGCC	5 cut(s)	188, 275, 331, 543, 655
BshNI	GGYRCC	1 cut(s)	821
BsiSI	CCGG	2 cut(s)	179, 332
BslI	CCNNNNNNNGG	3 cut(s)	67, 181, 326
BsmI	GAATGC	2 cut(s)	315, 492
BsnI	GGCC	5 cut(s)	188, 275, 331, 543, 655
Bsp119I	TTCGAA	1 cut(s)	120
Bsp120I	GGGCCC	1 cut(s)	541
Bsp1286I	GDGCHC	4 cut(s)	49, 545, 572, 693
Bsp143I	GATC	2 cut(s)	205, 754
Bsp19I	CCATGG	1 cut(s)	816
BspACI	CCGC	5 cut(s)	50, 182, 185, 198, 294
BspANI	GGCC	5 cut(s)	188, 275, 331, 543, 655
BspCNI	CTCAG	4 cut(s)	50, 179, 495, 815
BspLI	GGNNCC	8 cut(s)	46, 330, 336, 542, 543, 671, 756, 823
BspMI	ACCTGC	1 cut(s)	650
BspPI	GGATC	2 cut(s)	749, 762
BspT104I	TTCGAA	1 cut(s)	120
BspT107I	GGYRCC	1 cut(s)	821
BsrDI	GCAATG	1 cut(s)	685
BsrFI	RCCGGY	1 cut(s)	331
BssAI	RCCGGY	1 cut(s)	331
BssECI	CCNNGG	3 cut(s)	519, 665, 816
BssMI	GATC	2 cut(s)	205, 754
BssT1I	CCWWGG	3 cut(s)	519, 665, 816
Bst4CI	ACNGT	4 cut(s)	153, 463, 614, 868
Bst6I	CTCTTC	1 cut(s)	84
BstBI	TTCGAA	1 cut(s)	120
BstC8I	GCNNGC	4 cut(s)	273, 590, 608, 657
BstDEI	CTNAG	5 cut(s)	37, 166, 482, 729, 802
BstDSI	CCRYGG	1 cut(s)	816
BstF5I	GGATG	1 cut(s)	515
BstH2I	RGCGCY	1 cut(s)	135
BstHHI	GCGC	1 cut(s)	134
BstKTI	GATC	2 cut(s)	208, 757
BstMBI	GATC	2 cut(s)	205, 754
BstMWI	GCNNNNNNNGC	2 cut(s)	652, 830
BstNSI	RCATGY	3 cut(s)	592, 610, 687
BstSLI	GKGCMC	1 cut(s)	545
BstV1I	GCAGC	2 cut(s)	382, 502
BstV2I	GAAGAC	2 cut(s)	84, 235
BstX2I	RGATCY	1 cut(s)	754
BstXI	CCANNNNNNTGG	1 cut(s)	868
BstYI	RGATCY	1 cut(s)	754
Bsu36I	CCTNAGG	1 cut(s)	729
BsuRI	GGCC	5 cut(s)	188, 275, 331, 543, 655
BtgI	CCRYGG	1 cut(s)	816
BtgZI	GCGATG	1 cut(s)	814
BtsCI	GGATG	1 cut(s)	515
BtsIMutI	CAGTG	3 cut(s)	149, 459, 610
BveI	ACCTGC	1 cut(s)	650
Cac8I	GCNNGC	4 cut(s)	273, 590, 608, 657
CfoI	GCGC	1 cut(s)	134
Cfr10I	RCCGGY	1 cut(s)	331
Cfr13I	GGNCC	7 cut(s)	329, 541, 542, 653, 662, 669, 725
CseI	GACGC	1 cut(s)	635
Csp6I	GTAC	2 cut(s)	154, 278
CspCI	CAANNNNNGTGG	2 cut(s)	667, 702
CviAII	CATG	5 cut(s)	589, 607, 684, 817, 862
CviQI	GTAC	2 cut(s)	154, 278
DdeI	CTNAG	5 cut(s)	37, 166, 482, 729, 802
DpnI	GATC	2 cut(s)	207, 756
DpnII	GATC	2 cut(s)	205, 754
EaeI	YGGCCR	1 cut(s)	186
Eam1104I	CTCTTC	1 cut(s)	84
EarI	CTCTTC	1 cut(s)	84
EciI	GGCGGA	1 cut(s)	309
Eco130I	CCWWGG	3 cut(s)	519, 665, 816
Eco24I	GRGCYC	4 cut(s)	49, 545, 572, 693
Eco47I	GGWCC	3 cut(s)	662, 669, 725
Eco81I	CCTNAGG	1 cut(s)	729
EcoO109I	RGGNCCY	3 cut(s)	541, 542, 669
EcoT14I	CCWWGG	3 cut(s)	519, 665, 816
EcoT22I	ATGCAT	1 cut(s)	685
EcoT38I	GRGCYC	4 cut(s)	49, 545, 572, 693
ErhI	CCWWGG	3 cut(s)	519, 665, 816
FaeI	CATG	5 cut(s)	592, 610, 687, 820, 865
FatI	CATG	5 cut(s)	588, 606, 683, 816, 861
FauI	CCCGC	1 cut(s)	57
FbaI	TGATCA	1 cut(s)	205
Fnu4HI	GCNGC	5 cut(s)	183, 186, 199, 396, 491
FokI	GGATG	1 cut(s)	502
FriOI	GRGCYC	4 cut(s)	49, 545, 572, 693
Fsp4HI	GCNGC	5 cut(s)	183, 186, 199, 396, 491
FspBI	CTAG	1 cut(s)	525
GlaI	GCGC	1 cut(s)	133
GluI	GCNGC	5 cut(s)	183, 186, 199, 396, 491
HaeII	RGCGCY	1 cut(s)	135
HaeIII	GGCC	5 cut(s)	188, 275, 331, 543, 655
HapII	CCGG	2 cut(s)	179, 332
HgaI	GACGC	1 cut(s)	635
HhaI	GCGC	1 cut(s)	134
Hin1II	CATG	5 cut(s)	592, 610, 687, 820, 865
Hin6I	GCGC	1 cut(s)	132
HinP1I	GCGC	1 cut(s)	132
HinfI	GANTC	3 cut(s)	8, 92, 800
HpaII	CCGG	2 cut(s)	179, 332
HphI	GGTGA	3 cut(s)	8, 794, 860
Hpy166II	GTNNAC	3 cut(s)	238, 510, 871
Hpy188I	TCNGA	5 cut(s)	7, 169, 205, 485, 532
Hpy188III	TCNNGA	4 cut(s)	39, 260, 416, 573
Hpy8I	GTNNAC	3 cut(s)	238, 510, 871
Hpy99I	CGWCG	3 cut(s)	86, 251, 651
HpyAV	CCTTC	5 cut(s)	318, 330, 493, 768, 846
HpyCH4III	ACNGT	4 cut(s)	153, 463, 614, 868
HpyCH4IV	ACGT	3 cut(s)	84, 240, 433
HpyF10VI	GCNNNNNNNGC	2 cut(s)	652, 830
HpyF3I	CTNAG	5 cut(s)	37, 166, 482, 729, 802
HpySE526I	ACGT	3 cut(s)	84, 240, 433
Hsp92II	CATG	5 cut(s)	592, 610, 687, 820, 865
HspAI	GCGC	1 cut(s)	132
Ksp22I	TGATCA	1 cut(s)	205
Kzo9I	GATC	2 cut(s)	205, 754
LmnI	GCTCC	1 cut(s)	44
Lsp1109I	GCAGC	2 cut(s)	382, 502
LweI	GCATC	2 cut(s)	407, 633
MaeI	CTAG	1 cut(s)	525
MaeII	ACGT	3 cut(s)	84, 240, 433
MaeIII	GTNAC	3 cut(s)	56, 455, 848
MalI	GATC	2 cut(s)	207, 756
MboI	GATC	2 cut(s)	205, 754
MboII	GAAGA	4 cut(s)	89, 101, 134, 235
MflI	RGATCY	1 cut(s)	754
MhlI	GDGCHC	4 cut(s)	49, 545, 572, 693
MluCI	AATT	3 cut(s)	378, 771, 877
MlyI	GAGTC	2 cut(s)	101, 794
MnlI	CCTC	7 cut(s)	35, 61, 117, 150, 186, 226, 348
Mph1103I	ATGCAT	1 cut(s)	685
MseI	TTAA	2 cut(s)	342, 404
MslI	CAYNNNNRTG	1 cut(s)	866
MspI	CCGG	2 cut(s)	179, 332
Mva1269I	GAATGC	2 cut(s)	315, 492
MwoI	GCNNNNNNNGC	2 cut(s)	652, 830
NcoI	CCATGG	1 cut(s)	816
NdeII	GATC	2 cut(s)	205, 754
NlaIII	CATG	5 cut(s)	592, 610, 687, 820, 865
NlaIV	GGNNCC	8 cut(s)	46, 330, 336, 542, 543, 671, 756, 823
NmuCI	GTSAC	1 cut(s)	848
NsiI	ATGCAT	1 cut(s)	685
NspI	RCATGY	3 cut(s)	592, 610, 687
NspV	TTCGAA	1 cut(s)	120
PaeI	GCATGC	2 cut(s)	592, 610
PcsI	WCGNNNNNNNCGW	1 cut(s)	246
PctI	GAATGC	2 cut(s)	315, 492
PfeI	GAWTC	1 cut(s)	8
PkrI	GCNGC	5 cut(s)	184, 187, 200, 397, 492
PleI	GAGTC	2 cut(s)	100, 794
PpsI	GAGTC	2 cut(s)	100, 794
PpuMI	RGGWCCY	1 cut(s)	669
Psp1406I	AACGTT	1 cut(s)	433
Psp5II	RGGWCCY	1 cut(s)	669
PspN4I	GGNNCC	8 cut(s)	46, 330, 336, 542, 543, 671, 756, 823
PspOMI	GGGCCC	1 cut(s)	541
PspPI	GGNCC	7 cut(s)	329, 541, 542, 653, 662, 669, 725
PspPPI	RGGWCCY	1 cut(s)	669
PsuI	RGATCY	1 cut(s)	754
RsaI	GTAC	2 cut(s)	155, 279
RsaNI	GTAC	2 cut(s)	154, 278
RseI	CAYNNNNRTG	1 cut(s)	866
SaqAI	TTAA	2 cut(s)	342, 404
SatI	GCNGC	5 cut(s)	183, 186, 199, 396, 491
Sau3AI	GATC	2 cut(s)	205, 754
Sau96I	GGNCC	7 cut(s)	329, 541, 542, 653, 662, 669, 725
SchI	GAGTC	2 cut(s)	101, 794
SduI	GDGCHC	4 cut(s)	49, 545, 572, 693
SfaNI	GCATC	2 cut(s)	407, 633
SfuI	TTCGAA	1 cut(s)	120
SinI	GGWCC	3 cut(s)	662, 669, 725
SmiMI	CAYNNNNRTG	1 cut(s)	866
SmlI	CTYRAG	1 cut(s)	692
SmoI	CTYRAG	1 cut(s)	692
SphI	GCATGC	2 cut(s)	592, 610
Sse9I	AATT	3 cut(s)	378, 771, 877
SsiI	CCGC	5 cut(s)	50, 182, 185, 198, 294
SspMI	CTAG	1 cut(s)	525
StyI	CCWWGG	3 cut(s)	519, 665, 816
TaaI	ACNGT	4 cut(s)	153, 463, 614, 868
TaiI	ACGT	3 cut(s)	87, 243, 436
TaqI	TCGA	2 cut(s)	120, 246
TasI	AATT	3 cut(s)	378, 771, 877
TauI	GCSGC	3 cut(s)	185, 188, 201
TfiI	GAWTC	1 cut(s)	8
Tru1I	TTAA	2 cut(s)	342, 404
Tru9I	TTAA	2 cut(s)	342, 404
TscAI	CASTG	3 cut(s)	156, 466, 617
TseFI	GTSAC	1 cut(s)	848
TseI	GCWGC	2 cut(s)	395, 490
Tsp45I	GTSAC	1 cut(s)	848
TspDTI	ATGAA	3 cut(s)	315, 371, 540
TspGWI	ACGGA	1 cut(s)	443
TspRI	CASTG	3 cut(s)	156, 466, 617
VpaK11BI	GGWCC	3 cut(s)	662, 669, 725
XapI	RAATTY	1 cut(s)	877
XceI	RCATGY	3 cut(s)	592, 610, 687
XspI	CTAG	1 cut(s)	525
Zsp2I	ATGCAT	1 cut(s)	685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.