Rorug01G0194600

Splicing factor 3B subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0015246
Physical Location & Seq
Forward (+)
27282342 .. 27284342
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0194600.1

Sequence Viewer

Length: 2001 bp
ATGCAAGATATTATTCTAGCAGTTGCTACACGATTGGCAGAATGGACGGTGAGACCAATTTGGCGGCAGTTCAGTTATGTGATTCAGTACAAGAGCAACATTGAGCATCTCACCAGACAGGTTCAGGAACTGCATGATAAAAGATATGGAGTGGACATGGAGGTGAAACCTGCTACAGAAGCTTCGAAGATTATTGATCCTGGAGTTAAACATTGGCTGGCTGAGGTAGACAAGCTGATAGGAGAAAAGGAGAAGTGTTTCAATGAAGAGACTGTAGCAACAAAGGCAGCATGCTGTAATGGGTCTTTTCCAGATTTGAAGTGCCGTTATTCTTTAGGAAGGAAAGCTAAGAAGATGACTATGGTTTTTGATTACCTCCTTGCTAAAGATCTCGGGACTATAGCGCATCCTGCTCTTCCCCCAGAGGTGGAATTTCAACCCACACAATATTCTGAGGATTCTTCTCAGCTTGCAACCAACTTCCAGGAAGGTGCCAGCTCCTCAGAAACATCTAACCAAATTCAGCCGCCTACATCTACAGGAAAAAATATTTATTTTGAATCGAGGAGATCGACCATTAGAAGTGTAATGGAAGCTGTGAAGGGGAATGAGATCAATCCGGTTGTCATATGCGGCATGGGAGGTATTGGGAAGACAACATTGATGGGGGAAGTTGTTAACAGAGCAAAGAAAGAGGGTCTGTTTGATGAGTATACAAAGGCAACTGTTAAAGAAACTCTTGACAAAACTCCTGACATTTGTCTGATTCAAGATGAACTTGCTCGATATCTAGGTCTTCCACTTGAAGGAAAAGAAATAGATGCAAGAGCAAACAAGATACGTCAAAGATTATCTGCAGGTGCCAAGAAGGTTCTTGTAATATTAGACAATGTTTCGACAACAAACCCAGACTTTTTGTGGGAAGTAGGGATTCCTCGTGATCAAAATAGTTGTAAGATTTTAGTAACATCAAGAGAACGAGATGTATTCAAGGACATTGACACAAAAAAGAATTTCCCCATCAGTGATTTGCCAGAAAATGAGGCCTGGAGCTTGTTCAAGAAGACAGCAGGAGGTTTGATTGAATCTGATCCCGATTTGCATTTGGTAGCAAAACAGGTTGTGAAGGAATGTGCAGGGTTGCCAATTGCAATTTCAACTGTTGGAAGGGCACTACATGGTGAAGGAATTGCAATTTGGAAGAATGCACTTAGGGAAATGGAAAAGGCTTGCCCAGAAAATGTTCCAGGAGTGATAGATCATGTGTATGGAAAAATAAAATTCAGTTATGAATGTTTACAAAGCAAGCAAGCCAAATCATGCTTTCTGTTATGTTGCATATTTGCAGAAAGCGTTGATATACCGATTGAATATTTTGTTAGATTTGGGCTTGGGCTTGGGATCTTTAAAGGCATTGATTCAATGGCTGAAGGAAGAAACTGTATAGAAACATTGGTTCACACATTAAAAAGTCGCTTTCTATTGTTGGACAGTGATAAGAAAGAGTGTGTGAGAATGCATGATGTGGTGCGCGATGTAGCCTTGCATATAGCCTCTGAAGGGTTGACTCAAAAGAAAAGTGATGAGGTTAAAGAGAGAATTGTGGCAAGACACTCGGTGGAAACTGTGAAGTCTATGGATTGGCCAAAGAGTAGTGTTTCCGAGCAATCTACTTACTGCAGTTCACTGTGTATTGGTGGGCTTTCGGAGCTCTTACTGTTAAGATGCATAACTGAAAGTGGATTGGAGCCGCCACCCACAATTTTCAATAGAATGGAAGATCTCAAGGTTCTCGTAATTGCAGGTATTTCTCTATTGTCAATACTGCCATCACTTCCAGTTTTGAGAAACCTTCAAACATTGTGTTTGGAGGATTGCTATCTAAACTTTGATGTAGTATCTGTCATTGGGGAGATAAGGACACTCATGATACTCAGTTTACGTGGATCTGACATCAAACAACTGCCTGATACATTTAAAAATTTATCTAATCTAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

666

Amino Acids

74.36

Weight (kDa)

6.33

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATPase_2 PF01637 188 - 386 1.7e-07 ATPase domain predominantly from Archaea
NB-ARC PF00931 193 - 357 4.6e-22 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015246)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18510
fragaria_vesca FvH4_7g10600
malus_domestica MD07G1111200.v1.1
prunus_persica Prupe.2G134600_v2.0.a1
pyrus_communis pycom07g09600
rosa_chinensis RchiOBHm_Chr1g0348441
rosa_laevigata RLG00000016689 RLG00000028645 RLG00000028653 RLG00000028658
rosa_multiflora Rmu_sc0000091.1_g000014
rosa_roxburghii Rroxscaffold_4G00306980
rosa_rugosa Rorug01G0194600
rosa_samantha Rh1BG179000 Rh1CG197000
rosa_wichuraiana Rw1G018000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 848
Acc36I ACCTGC 3 cut(s) 178, 848, 1793
AccB1I GGYRCC 2 cut(s) 491, 860
AccI GTMKAC 2 cut(s) 228, 713
AccII CGCG 1 cut(s) 1533
AciI CCGC 4 cut(s) 64, 527, 633, 1751
AclWI GGATC 4 cut(s) 191, 1085, 1409, 1954
AcoI YGGCCR 1 cut(s) 1643
AcsI RAATTY 5 cut(s) 431, 519, 1012, 1280, 1981
AcuI CTGAAG 2 cut(s) 1449, 1578
AdeI CACNNNGTG 1 cut(s) 1618
AfaI GTAC 1 cut(s) 89
AfiI CCNNNNNNNGG 3 cut(s) 427, 806, 1560
AjnI CCWGG 4 cut(s) 199, 483, 1046, 1246
AjuI GAANNNNNNNTTGG 4 cut(s) 1138, 1170, 1180, 1212
AluBI AGCT 8 cut(s) 182, 235, 347, 469, 498, 596, 1053, 1711
AluI AGCT 8 cut(s) 182, 235, 347, 469, 498, 596, 1053, 1711
Alw21I GWGCWC 1 cut(s) 1713
Alw26I GTCTC 2 cut(s) 46, 263
AlwI GGATC 4 cut(s) 191, 1085, 1409, 1954
AlwNI CAGNNNCTG 1 cut(s) 130
Ama87I CYCGRG 1 cut(s) 392
AoxI GGCC 2 cut(s) 1044, 1643
ApeKI GCWGC 1 cut(s) 287
ApoI RAATTY 5 cut(s) 431, 519, 1012, 1280, 1981
Asp700I GAANNNNTTC 2 cut(s) 257, 1242
AspLEI GCGC 2 cut(s) 406, 1533
AsuHPI GGTGA 4 cut(s) 61, 103, 175, 1193
AsuII TTCGAA 1 cut(s) 185
AvaI CYCGRG 1 cut(s) 392
BaeGI GKGCMC 1 cut(s) 1174
BalI TGGCCA 1 cut(s) 1645
BanI GGYRCC 2 cut(s) 491, 860
BanII GRGCYC 1 cut(s) 1713
BauI CACGAG 1 cut(s) 936
BbsI GAAGAC 3 cut(s) 659, 788, 1070
Bbv12I GWGCWC 1 cut(s) 1713
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 1 cut(s) 299
BccI CCATC 3 cut(s) 658, 1028, 1837
BceAI ACGGC 1 cut(s) 309
BcgI CGANNNNNNTGC 2 cut(s) 1596, 1630
BciT130I CCWGG 4 cut(s) 201, 485, 1048, 1248
BclI TGATCA 1 cut(s) 940
BcoDI GTCTC 2 cut(s) 46, 263
BfaI CTAG 2 cut(s) 17, 791
BfmI CTRYAG 6 cut(s) 174, 273, 399, 537, 855, 1678
BfuAI ACCTGC 3 cut(s) 178, 848, 1793
BglII AGATCT 2 cut(s) 388, 1780
BisI GCNGC 5 cut(s) 65, 288, 527, 634, 1751
BlsI GCNGC 5 cut(s) 66, 289, 528, 635, 1752
Bme1390I CCNGG 4 cut(s) 201, 485, 1048, 1248
BmeT110I CYCGRG 1 cut(s) 392
BmiI GGNNCC 3 cut(s) 493, 862, 1749
BmrFI CCNGG 4 cut(s) 201, 485, 1048, 1248
BmsI GCATC 4 cut(s) 115, 415, 811, 1715
BoxI GACNNNNGTC 1 cut(s) 759
BpiI GAAGAC 3 cut(s) 659, 788, 1070
BpmI CTGGAG 2 cut(s) 222, 1069
Bpu10I CCTNAGC 1 cut(s) 222
Bpu14I TTCGAA 1 cut(s) 185
BpuEI CTTGAG 1 cut(s) 1769
BsaAI YACGTR 1 cut(s) 1943
BsaBI GATNNNNATC 1 cut(s) 1878
BsaI GGTCTC 1 cut(s) 46
BsaWI WCCGGW 1 cut(s) 619
Bsc4I CCNNNNNNNGG 3 cut(s) 427, 806, 1560
Bse1I ACTGG 1 cut(s) 1838
Bse8I GATNNNNATC 1 cut(s) 1878
BseBI CCWGG 4 cut(s) 201, 485, 1048, 1248
BseGI GGATG 1 cut(s) 406
BseJI GATNNNNATC 1 cut(s) 1878
BseLI CCNNNNNNNGG 3 cut(s) 427, 806, 1560
BseMII CTCAG 5 cut(s) 213, 444, 479, 516, 1948
BseNI ACTGG 1 cut(s) 1838
BseRI GAGGAG 2 cut(s) 490, 580
BseSI GKGCMC 1 cut(s) 1174
BseXI GCAGC 1 cut(s) 299
BsgI GTGCAG 1 cut(s) 1155
Bsh1236I CGCG 1 cut(s) 1533
BshFI GGCC 2 cut(s) 1046, 1645
BshNI GGYRCC 2 cut(s) 491, 860
BsiHKAI GWGCWC 1 cut(s) 1713
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 1 cut(s) 620
BslFI GGGAC 1 cut(s) 409
BslI CCNNNNNNNGG 3 cut(s) 427, 806, 1560
BsmAI GTCTC 2 cut(s) 46, 263
BsmFI GGGAC 1 cut(s) 409
BsmI GAATGC 2 cut(s) 1210, 1521
BsnI GGCC 2 cut(s) 1046, 1645
Bso31I GGTCTC 1 cut(s) 46
BsoBI CYCGRG 1 cut(s) 392
Bsp119I TTCGAA 1 cut(s) 185
Bsp1286I GDGCHC 2 cut(s) 1174, 1713
BspACI CCGC 4 cut(s) 64, 527, 633, 1751
BspANI GGCC 2 cut(s) 1046, 1645
BspCNI CTCAG 5 cut(s) 214, 445, 478, 515, 1947
BspFNI CGCG 1 cut(s) 1533
BspHI TCATGA 1 cut(s) 1926
BspLI GGNNCC 3 cut(s) 493, 862, 1749
BspMAI CTGCAG 2 cut(s) 859, 1682
BspMI ACCTGC 3 cut(s) 178, 848, 1793
BspPI GGATC 4 cut(s) 191, 1085, 1409, 1954
BspQI GCTCTTC 1 cut(s) 420
BspT104I TTCGAA 1 cut(s) 185
BspT107I GGYRCC 2 cut(s) 491, 860
BspTNI GGTCTC 1 cut(s) 46
BsrI ACTGG 1 cut(s) 1838
BssNAI GTATAC 1 cut(s) 714
BssSI CACGAG 1 cut(s) 936
Bst1107I GTATAC 1 cut(s) 714
Bst2BI CACGAG 1 cut(s) 936
Bst2UI CCWGG 4 cut(s) 201, 485, 1048, 1248
Bst4CI ACNGT 9 cut(s) 49, 274, 727, 1162, 1442, 1493, 1627, 1689, 1719
Bst6I CTCTTC 2 cut(s) 261, 420
BstBAI YACGTR 1 cut(s) 1943
BstBI TTCGAA 1 cut(s) 185
BstC8I GCNNGC 7 cut(s) 219, 292, 471, 496, 1231, 1307, 1311
BstDEI CTNAG 8 cut(s) 222, 348, 453, 465, 502, 1211, 1934, 1994
BstF5I GGATG 1 cut(s) 406
BstFNI CGCG 1 cut(s) 1533
BstHHI GCGC 2 cut(s) 406, 1533
BstMAI GTCTC 2 cut(s) 46, 263
BstMWI GCNNNNNNNGC 4 cut(s) 179, 284, 410, 1708
BstNI CCWGG 4 cut(s) 201, 485, 1048, 1248
BstNSI RCATGY 1 cut(s) 294
BstPAI GACNNNNGTC 1 cut(s) 759
BstSCI CCNGG 4 cut(s) 199, 483, 1046, 1246
BstSFI CTRYAG 6 cut(s) 174, 273, 399, 537, 855, 1678
BstSLI GKGCMC 1 cut(s) 1174
BstUI CGCG 1 cut(s) 1533
BstV1I GCAGC 1 cut(s) 299
BstV2I GAAGAC 3 cut(s) 659, 788, 1070
BstX2I RGATCY 4 cut(s) 388, 1401, 1780, 1946
BstYI RGATCY 4 cut(s) 388, 1401, 1780, 1946
BstZ17I GTATAC 1 cut(s) 714
BsuRI GGCC 2 cut(s) 1046, 1645
BtgZI GCGATG 1 cut(s) 1548
BtsCI GGATG 1 cut(s) 406
BtsIMutI CAGTG 3 cut(s) 1030, 1498, 1685
BveI ACCTGC 3 cut(s) 178, 848, 1793
Cac8I GCNNGC 7 cut(s) 219, 292, 471, 496, 1231, 1307, 1311
CaiI CAGNNNCTG 1 cut(s) 130
CciI TCATGA 1 cut(s) 1926
CfoI GCGC 2 cut(s) 406, 1533
Csp6I GTAC 1 cut(s) 88
CviAII CATG 9 cut(s) 134, 157, 291, 637, 1178, 1262, 1320, 1520, 1927
CviQI GTAC 1 cut(s) 88
DdeI CTNAG 8 cut(s) 222, 348, 453, 465, 502, 1211, 1934, 1994
DraI TTTAAA 2 cut(s) 1408, 1978
DraIII CACNNNGTG 1 cut(s) 1618
EaeI YGGCCR 1 cut(s) 1643
Eam1104I CTCTTC 2 cut(s) 261, 420
EarI CTCTTC 2 cut(s) 261, 420
Ecl136II GAGCTC 1 cut(s) 1711
Eco147I AGGCCT 1 cut(s) 1046
Eco24I GRGCYC 1 cut(s) 1713
Eco31I GGTCTC 1 cut(s) 46
Eco32I GATATC 1 cut(s) 788
Eco53kI GAGCTC 1 cut(s) 1711
Eco57I CTGAAG 2 cut(s) 1449, 1578
Eco88I CYCGRG 1 cut(s) 392
EcoICRI GAGCTC 1 cut(s) 1711
EcoRII CCWGG 4 cut(s) 199, 483, 1046, 1246
EcoRV GATATC 1 cut(s) 788
EcoT22I ATGCAT 2 cut(s) 1521, 1730
EcoT38I GRGCYC 1 cut(s) 1713
FaeI CATG 9 cut(s) 137, 160, 294, 640, 1181, 1265, 1323, 1523, 1930
FalI AAGNNNNNCTT 4 cut(s) 723, 755, 762, 794
FaqI GGGAC 1 cut(s) 409
FatI CATG 9 cut(s) 133, 156, 290, 636, 1177, 1261, 1319, 1519, 1926
FauNDI CATATG 1 cut(s) 629
FbaI TGATCA 1 cut(s) 940
FblI GTMKAC 2 cut(s) 228, 713
Fnu4HI GCNGC 5 cut(s) 65, 288, 527, 634, 1751
FokI GGATG 1 cut(s) 393
FriOI GRGCYC 1 cut(s) 1713
Fsp4HI GCNGC 5 cut(s) 65, 288, 527, 634, 1751
FspBI CTAG 2 cut(s) 17, 791
GlaI GCGC 2 cut(s) 405, 1532
GluI GCNGC 5 cut(s) 65, 288, 527, 634, 1751
GsuI CTGGAG 2 cut(s) 222, 1069
HaeIII GGCC 2 cut(s) 1046, 1645
HapII CCGG 1 cut(s) 620
HhaI GCGC 2 cut(s) 406, 1533
Hin1II CATG 9 cut(s) 137, 160, 294, 640, 1181, 1265, 1323, 1523, 1930
Hin6I GCGC 2 cut(s) 404, 1531
HinP1I GCGC 2 cut(s) 404, 1531
HincII GTYRAC 2 cut(s) 679, 1566
HindII GTYRAC 2 cut(s) 679, 1566
HindIII AAGCTT 1 cut(s) 180
HinfI GANTC 8 cut(s) 82, 458, 560, 766, 931, 1085, 1418, 1567
HpaI GTTAAC 1 cut(s) 679
HpaII CCGG 1 cut(s) 620
HphI GGTGA 4 cut(s) 61, 103, 175, 1193
Hpy166II GTNNAC 9 cut(s) 154, 229, 679, 714, 1298, 1459, 1566, 1685, 1940
Hpy188I TCNGA 8 cut(s) 454, 505, 765, 1090, 1558, 1663, 1708, 1951
Hpy8I GTNNAC 9 cut(s) 154, 229, 679, 714, 1298, 1459, 1566, 1685, 1940
HpyCH4III ACNGT 9 cut(s) 49, 274, 727, 1162, 1442, 1493, 1627, 1689, 1719
HpyCH4IV ACGT 2 cut(s) 841, 1942
HpyF10VI GCNNNNNNNGC 4 cut(s) 179, 284, 410, 1708
HpyF3I CTNAG 8 cut(s) 222, 348, 453, 465, 502, 1211, 1934, 1994
HpySE526I ACGT 2 cut(s) 841, 1942
Hsp92II CATG 9 cut(s) 137, 160, 294, 640, 1181, 1265, 1323, 1523, 1930
HspAI GCGC 2 cut(s) 404, 1531
Ksp22I TGATCA 1 cut(s) 940
KspAI GTTAAC 1 cut(s) 679
LguI GCTCTTC 1 cut(s) 420
LmnI GCTCC 4 cut(s) 503, 1050, 1708, 1747
Lsp1109I GCAGC 1 cut(s) 299
LweI GCATC 4 cut(s) 115, 415, 811, 1715
MaeI CTAG 2 cut(s) 17, 791
MaeII ACGT 2 cut(s) 841, 1942
MaeIII GTNAC 1 cut(s) 964
MfeI CAATTG 1 cut(s) 1146
MflI RGATCY 4 cut(s) 388, 1401, 1780, 1946
MhlI GDGCHC 2 cut(s) 1174, 1713
MlsI TGGCCA 1 cut(s) 1645
MluNI TGGCCA 1 cut(s) 1645
MlyI GAGTC 1 cut(s) 1561
MmeI TCCRAC 2 cut(s) 1144, 1467
Mox20I TGGCCA 1 cut(s) 1645
Mph1103I ATGCAT 2 cut(s) 1521, 1730
MroXI GAANNNNTTC 2 cut(s) 257, 1242
MscI TGGCCA 1 cut(s) 1645
MseI TTAA 8 cut(s) 207, 678, 729, 1407, 1466, 1590, 1721, 1977
MslI CAYNNNNRTG 2 cut(s) 161, 1266
Msp20I TGGCCA 1 cut(s) 1645
MspI CCGG 1 cut(s) 620
MspR9I CCNGG 4 cut(s) 201, 485, 1048, 1248
MunI CAATTG 1 cut(s) 1146
Mva1269I GAATGC 2 cut(s) 1210, 1521
MvaI CCWGG 4 cut(s) 201, 485, 1048, 1248
MvnI CGCG 1 cut(s) 1533
MwoI GCNNNNNNNGC 4 cut(s) 179, 284, 410, 1708
NdeI CATATG 1 cut(s) 629
NlaIII CATG 9 cut(s) 137, 160, 294, 640, 1181, 1265, 1323, 1523, 1930
NlaIV GGNNCC 3 cut(s) 493, 862, 1749
NsiI ATGCAT 2 cut(s) 1521, 1730
NspI RCATGY 1 cut(s) 294
NspV TTCGAA 1 cut(s) 185
PaeI GCATGC 1 cut(s) 294
PagI TCATGA 1 cut(s) 1926
PaqCI CACCTGC 1 cut(s) 848
PceI AGGCCT 1 cut(s) 1046
PciSI GCTCTTC 1 cut(s) 420
PcsI WCGNNNNNNNCGW 1 cut(s) 569
PctI GAATGC 2 cut(s) 1210, 1521
PdmI GAANNNNTTC 2 cut(s) 257, 1242
PfeI GAWTC 7 cut(s) 82, 458, 560, 766, 931, 1085, 1418
PfoI TCCNGGA 3 cut(s) 199, 483, 1246
PkrI GCNGC 5 cut(s) 66, 289, 528, 635, 1752
PleI GAGTC 1 cut(s) 1561
PpsI GAGTC 1 cut(s) 1561
Ppu21I YACGTR 1 cut(s) 1943
PshAI GACNNNNGTC 1 cut(s) 759
Psp124BI GAGCTC 1 cut(s) 1713
Psp6I CCWGG 4 cut(s) 199, 483, 1046, 1246
PspGI CCWGG 4 cut(s) 199, 483, 1046, 1246
PspN4I GGNNCC 3 cut(s) 493, 862, 1749
PstI CTGCAG 2 cut(s) 859, 1682
PstNI CAGNNNCTG 1 cut(s) 130
PsuI RGATCY 4 cut(s) 388, 1401, 1780, 1946
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
RseI CAYNNNNRTG 2 cut(s) 161, 1266
SacI GAGCTC 1 cut(s) 1713
SapI GCTCTTC 1 cut(s) 420
SaqAI TTAA 8 cut(s) 207, 678, 729, 1407, 1466, 1590, 1721, 1977
SatI GCNGC 5 cut(s) 65, 288, 527, 634, 1751
SchI GAGTC 1 cut(s) 1561
ScrFI CCNGG 4 cut(s) 201, 485, 1048, 1248
SduI GDGCHC 2 cut(s) 1174, 1713
SfaNI GCATC 4 cut(s) 115, 415, 811, 1715
SfcI CTRYAG 6 cut(s) 174, 273, 399, 537, 855, 1678
SfuI TTCGAA 1 cut(s) 185
SmiMI CAYNNNNRTG 2 cut(s) 161, 1266
SmlI CTYRAG 1 cut(s) 1784
SmoI CTYRAG 1 cut(s) 1784
SphI GCATGC 1 cut(s) 294
SseBI AGGCCT 1 cut(s) 1046
SsiI CCGC 4 cut(s) 64, 527, 633, 1751
SspI AATATT 4 cut(s) 449, 550, 882, 1373
SspMI CTAG 2 cut(s) 17, 791
SstI GAGCTC 1 cut(s) 1713
StuI AGGCCT 1 cut(s) 1046
StyD4I CCNGG 4 cut(s) 199, 483, 1046, 1246
TaaI ACNGT 9 cut(s) 49, 274, 727, 1162, 1442, 1493, 1627, 1689, 1719
TaiI ACGT 2 cut(s) 844, 1945
TaqI TCGA 5 cut(s) 185, 563, 572, 784, 896
TatI WGTACW 1 cut(s) 87
TauI GCSGC 4 cut(s) 67, 529, 636, 1753
TfiI GAWTC 7 cut(s) 82, 458, 560, 766, 931, 1085, 1418
Tru1I TTAA 8 cut(s) 207, 678, 729, 1407, 1466, 1590, 1721, 1977
Tru9I TTAA 8 cut(s) 207, 678, 729, 1407, 1466, 1590, 1721, 1977
TscAI CASTG 3 cut(s) 1030, 1498, 1692
TseI GCWGC 1 cut(s) 287
TspDTI ATGAA 3 cut(s) 279, 789, 1305
TspRI CASTG 3 cut(s) 1030, 1498, 1692
XapI RAATTY 5 cut(s) 431, 519, 1012, 1280, 1981
XceI RCATGY 1 cut(s) 294
XcmI CCANNNNNNNNNTGG 1 cut(s) 915
XmiI GTMKAC 2 cut(s) 228, 713
XmnI GAANNNNTTC 2 cut(s) 257, 1242
XspI CTAG 2 cut(s) 17, 791
Zsp2I ATGCAT 2 cut(s) 1521, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.