Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0011684

Physical Location & Seq

Genomic Coordinates Forward (+)

49025184 .. 49028137

Gene Structure 2954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0376500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGGCTGGAATTTGCTGCGGTCTAGTTGGAGAAAGCGAGACTTCAGCTTCGATTGAGCCAAGCTCCCGGACCTCGAGGCGCCGGAGATTGGATCTTTTGTCGATTAAGTGTATTGCCGCCGATCACATGGCGGTGCAGCAGGCGGTGGATAGCGGCCGGAAGCGGCAGAAGCTTGATCTGTTGCGGTCCTTGTCTCGGGACTGCGAAAAACGTGAAGAGTCGGAAGCAAAGCGTGGCTCAACTATGCGTTTGGATGGCAAGGAGGCGGTTATTACACGTGGAGAGTCCAAAGCTTTGCATGCGGAAAACGAAGTGGTCGTTCCGCCGCGGGTGGTGCGGGAACCCCCGCGCTTCGGTTCCACTTCGGTTTGCGGAAGGAGAAGAGATATGGAAGACGCCGTTTCGATTCACCCTACGCTCTGTCGAGACGACGCTTCCGACTCCGATGGATGCCACTTCTACGGTGTTTACGACGGCCACGGTTGCTCTCATGTTGCGTTGAAGTGCAAGGACAGATTGCATGAGATCGTGAAAGAAGACCTGGAAAGACAGAGCGTTGTTCAATGGAAGGACACCATGGAGCGAAGCTTTTCGAAAATGGACCAAGAGGTCCAGACCGGGAACCAAGTCCCTCAGAGTCCCAACTGCAGATGCGAGCTCCAAACTCCGCAGTGCGACGCCGTGGGGTCCACCGCCGTCGTGGCGGTGGTGACTCCGGAGAAGATCATCGTCTCCAATTGCGGCGACTCCCGCGCCGTGCTCTGCCGGAGTGGCGCCGCCGTGCCTCTCTCCTCCGATCATAAGCCTGACCGACCAGACGAGCTGCTCCGGATCGAAGCCGCCGGAGGGCGCGTGATCTACTGGGACGGCCCTAGAGTCCTCGGAGTGCTCGCCATGTCGCGAGCCATCGGCGACAACTATCTCAAACCGTACGTTATATCGGAGCCGGAGGTGACGATCATGGACCGGACGGCGGAGGACGAGTGTTTGATTCTGGCCAGCGACGGCCTTTGGGACGTTGTCTCAAACGACACCGCCTGCGGCGTCGTACGCATGTGCCTGCGAGCGCAGAAGACGCGAGAAGCTTCGGGCGGTGACGTGGCGGACGGGGAGTCATCGGGCGGCGAGAATTCCGACAAGGCGTGCGCCGACGCCTCCATTTTGCTGACGAAGCTGGCCCTGGCGAGGCAGAGTTCGGATAACGTGAGCGTGGTGGTGGTGGATTTGAGGAGGCATGAGAGATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016604 GO:0019222 GO:0019439 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034655 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0070717 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990251 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03015 ko05164 map03015 map05164

Pfam Domains

Protein Families

RRM_1

Protein Analysis

415

Amino Acids

45.27

Weight (kDa)

5.72

Isoelectric Point (pI)

56.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PP2C	PF00481	118 - 361	2e-64	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51120 AT5G51120 AT5G51120
fragaria_vesca	FvH4_7g26520 FvH4_7g26520
malus_domestica	MD01G1174000.v1.1 MD07G1240900.v1.1
prunus_persica	Prupe.2G269600_v2.0.a1
pyrus_communis	pycom01g18580
rosa_chinensis	RchiOBHm_Chr1g0373171
rosa_laevigata	RLG00000026846
rosa_multiflora	Rmu_sc0000170.1_g000015
rosa_roxburghii	Rroxscaffold_4G00284410
rosa_rugosa	Rorug01G0376500
rosa_samantha	Rh1AG384900 Rh1BG348800 Rh1CG362300 Rh1DG379800
rosa_wichuraiana	Rw1G033950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	608
AbsI	CCTCGAGG	1 cut(s)	73
AccB1I	GGYRCC	2 cut(s)	78, 773
AccII	CGCG	6 cut(s)	328, 349, 753, 852, 901, 1078
AccIII	TCCGGA	2 cut(s)	715, 828
AclWI	GGATC	2 cut(s)	99, 839
AcoI	YGGCCR	3 cut(s)	154, 475, 996
AcsI	RAATTY	2 cut(s)	9, 1129
AcuI	CTGAAG	1 cut(s)	27
AcvI	CACGTG	1 cut(s)	278
AcyI	GRCGYC	6 cut(s)	79, 396, 678, 774, 1044, 1152
AfaI	GTAC	2 cut(s)	932, 1050
AfiI	CCNNNNNNNGG	6 cut(s)	88, 195, 353, 846, 973, 1185
AflIII	ACRYGT	1 cut(s)	275
AgsI	TTSAA	2 cut(s)	502, 563
AhdI	GACNNNNNGTC	1 cut(s)	1111
AjiI	CACGTC	1 cut(s)	1099
AjnI	CCWGG	2 cut(s)	540, 1179
AluBI	AGCT	9 cut(s)	47, 63, 172, 293, 588, 658, 823, 1085, 1174
AluI	AGCT	9 cut(s)	47, 63, 172, 293, 588, 658, 823, 1085, 1174
Alw21I	GWGCWC	3 cut(s)	660, 762, 891
Alw26I	GTCTC	5 cut(s)	32, 198, 420, 736, 1027
AlwI	GGATC	2 cut(s)	99, 839
Ama87I	CYCGRG	2 cut(s)	73, 195
Aor13HI	TCCGGA	2 cut(s)	715, 828
AoxI	GGCC	6 cut(s)	154, 475, 868, 996, 1006, 1176
ApeKI	GCWGC	3 cut(s)	15, 136, 823
ApoI	RAATTY	2 cut(s)	9, 1129
ArsI	GACNNNNNNTTYG	2 cut(s)	31, 63
Asp700I	GAANNNNTTC	1 cut(s)	589
AspLEI	GCGC	7 cut(s)	81, 351, 755, 776, 852, 1069, 1148
AspS9I	GGNCC	8 cut(s)	69, 186, 601, 610, 687, 869, 964, 1177
AsuC2I	CCSGG	2 cut(s)	67, 619
AsuHPI	GGTGA	4 cut(s)	401, 721, 964, 1106
AsuII	TTCGAA	1 cut(s)	593
AvaI	CYCGRG	2 cut(s)	73, 195
AvaII	GGWCC	6 cut(s)	69, 186, 601, 610, 687, 964
BalI	TGGCCA	1 cut(s)	998
BanI	GGYRCC	2 cut(s)	78, 773
BanII	GRGCYC	1 cut(s)	660
BbrPI	CACGTG	1 cut(s)	278
BbsI	GAAGAC	3 cut(s)	399, 543, 1079
Bbv12I	GWGCWC	3 cut(s)	660, 762, 891
BbvI	GCAGC	3 cut(s)	2, 148, 810
BccI	CCATC	3 cut(s)	248, 440, 914
BceAI	ACGGC	9 cut(s)	383, 490, 665, 680, 740, 764, 883, 987, 1021
BciT130I	CCWGG	2 cut(s)	542, 1181
BcnI	CCSGG	2 cut(s)	67, 619
BcoDI	GTCTC	5 cut(s)	32, 198, 420, 736, 1027
BfaI	CTAG	2 cut(s)	23, 873
BfmI	CTRYAG	1 cut(s)	646
BfoI	RGCGCY	2 cut(s)	82, 777
BglI	GCCNNNNNGGC	2 cut(s)	701, 771
Bme1390I	CCNGG	4 cut(s)	67, 542, 619, 1181
Bme18I	GGWCC	6 cut(s)	69, 186, 601, 610, 687, 964
BmeRI	GACNNNNNGTC	1 cut(s)	1111
BmeT110I	CYCGRG	2 cut(s)	73, 195
BmgBI	CACGTC	1 cut(s)	1099
BmgT120I	GGNCC	8 cut(s)	69, 186, 601, 610, 687, 869, 964, 1177
BmiI	GGNNCC	7 cut(s)	80, 342, 358, 623, 688, 775, 945
BmrFI	CCNGG	4 cut(s)	67, 542, 619, 1181
BmrI	ACTGGG	1 cut(s)	871
BmsI	GCATC	2 cut(s)	440, 641
BmuI	ACTGGG	1 cut(s)	871
BpiI	GAAGAC	3 cut(s)	399, 543, 1079
BplI	GAGNNNNNCTC	2 cut(s)	47, 79
Bpu14I	TTCGAA	1 cut(s)	593
BpuMI	CCSGG	2 cut(s)	67, 619
BsaAI	YACGTR	1 cut(s)	278
BsaHI	GRCGYC	6 cut(s)	79, 396, 678, 774, 1044, 1152
BsaJI	CCNNGG	6 cut(s)	326, 478, 576, 681, 880, 1179
BsaWI	WCCGGW	3 cut(s)	715, 828, 966
BsaXI	ACNNNNNCTCC	4 cut(s)	837, 867, 968, 998
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 195, 353, 846, 973, 1185
Bse1I	ACTGG	1 cut(s)	866
BseAI	TCCGGA	2 cut(s)	715, 828
BseBI	CCWGG	2 cut(s)	542, 1181
BseDI	CCNNGG	6 cut(s)	326, 478, 576, 681, 880, 1179
BseGI	GGATG	2 cut(s)	259, 455
BseLI	CCNNNNNNNGG	6 cut(s)	88, 195, 353, 846, 973, 1185
BseMII	CTCAG	1 cut(s)	647
BseNI	ACTGG	1 cut(s)	866
BseRI	GAGGAG	2 cut(s)	781, 1243
BseX3I	CGGCCG	1 cut(s)	154
BseXI	GCAGC	3 cut(s)	2, 148, 810
BsgI	GTGCAG	1 cut(s)	155
Bsh1236I	CGCG	6 cut(s)	328, 349, 753, 852, 901, 1078
Bsh1285I	CGRYCG	1 cut(s)	157
BshFI	GGCC	6 cut(s)	156, 477, 870, 998, 1008, 1178
BshNI	GGYRCC	2 cut(s)	78, 773
BsiEI	CGRYCG	1 cut(s)	157
BsiHKAI	GWGCWC	3 cut(s)	660, 762, 891
BsiHKCI	CYCGRG	2 cut(s)	73, 195
BsiWI	CGTACG	2 cut(s)	930, 1048
BslFI	GGGAC	5 cut(s)	212, 614, 624, 878, 1028
BslI	CCNNNNNNNGG	6 cut(s)	88, 195, 353, 846, 973, 1185
BsmAI	GTCTC	5 cut(s)	32, 198, 420, 736, 1027
BsmBI	CGTCTC	2 cut(s)	420, 736
BsmFI	GGGAC	5 cut(s)	212, 614, 624, 878, 1028
BsnI	GGCC	6 cut(s)	156, 477, 870, 998, 1008, 1178
BsoBI	CYCGRG	2 cut(s)	73, 195
Bsp119I	TTCGAA	1 cut(s)	593
Bsp1286I	GDGCHC	3 cut(s)	660, 762, 891
Bsp13I	TCCGGA	2 cut(s)	715, 828
Bsp19I	CCATGG	1 cut(s)	576
Bsp68I	TCGCGA	1 cut(s)	901
BspANI	GGCC	6 cut(s)	156, 477, 870, 998, 1008, 1178
BspCNI	CTCAG	1 cut(s)	646
BspEI	TCCGGA	2 cut(s)	715, 828
BspFNI	CGCG	6 cut(s)	328, 349, 753, 852, 901, 1078
BspLI	GGNNCC	7 cut(s)	80, 342, 358, 623, 688, 775, 945
BspMAI	CTGCAG	1 cut(s)	650
BspPI	GGATC	2 cut(s)	99, 839
BspT104I	TTCGAA	1 cut(s)	593
BspT107I	GGYRCC	2 cut(s)	78, 773
BsrI	ACTGG	1 cut(s)	866
BssECI	CCNNGG	6 cut(s)	326, 478, 576, 681, 880, 1179
BssNI	GRCGYC	6 cut(s)	79, 396, 678, 774, 1044, 1152
BssT1I	CCWWGG	1 cut(s)	576
Bst2UI	CCWGG	2 cut(s)	542, 1181
Bst4CI	ACNGT	3 cut(s)	464, 482, 930
Bst6I	CTCTTC	2 cut(s)	210, 376
BstACI	GRCGYC	6 cut(s)	79, 396, 678, 774, 1044, 1152
BstBAI	YACGTR	1 cut(s)	278
BstBI	TTCGAA	1 cut(s)	593
BstDEI	CTNAG	1 cut(s)	633
BstDSI	CCRYGG	4 cut(s)	326, 478, 576, 681
BstF5I	GGATG	2 cut(s)	259, 455
BstFNI	CGCG	6 cut(s)	328, 349, 753, 852, 901, 1078
BstH2I	RGCGCY	2 cut(s)	82, 777
BstHHI	GCGC	7 cut(s)	81, 351, 755, 776, 852, 1069, 1148
BstMAI	GTCTC	5 cut(s)	32, 198, 420, 736, 1027
BstMCI	CGRYCG	1 cut(s)	157
BstNI	CCWGG	2 cut(s)	542, 1181
BstNSI	RCATGY	2 cut(s)	302, 1057
BstSCI	CCNGG	4 cut(s)	65, 540, 617, 1179
BstSFI	CTRYAG	1 cut(s)	646
BstUI	CGCG	6 cut(s)	328, 349, 753, 852, 901, 1078
BstV1I	GCAGC	3 cut(s)	2, 148, 810
BstV2I	GAAGAC	3 cut(s)	399, 543, 1079
BstX2I	RGATCY	1 cut(s)	91
BstYI	RGATCY	1 cut(s)	91
BstZI	CGGCCG	1 cut(s)	154
BsuRI	GGCC	6 cut(s)	156, 477, 870, 998, 1008, 1178
BtgI	CCRYGG	4 cut(s)	326, 478, 576, 681
BtrI	CACGTC	1 cut(s)	1099
BtsCI	GGATG	2 cut(s)	259, 455
BtsI	GCAGTG	1 cut(s)	677
BtsIMutI	CAGTG	1 cut(s)	677
BtuMI	TCGCGA	1 cut(s)	901
CfoI	GCGC	7 cut(s)	81, 351, 755, 776, 852, 1069, 1148
Cfr13I	GGNCC	8 cut(s)	69, 186, 601, 610, 687, 869, 964, 1177
Cfr42I	CCGCGG	1 cut(s)	329
CseI	GACGC	6 cut(s)	404, 440, 686, 1033, 1084, 1160
Csp6I	GTAC	2 cut(s)	931, 1049
CviAII	CATG	9 cut(s)	127, 299, 491, 521, 577, 895, 961, 1054, 1235
CviQI	GTAC	2 cut(s)	931, 1049
DdeI	CTNAG	1 cut(s)	633
DinI	GGCGCC	2 cut(s)	80, 775
DrdI	GACNNNNNNGTC	1 cut(s)	608
DriI	GACNNNNNGTC	1 cut(s)	1111
DseDI	GACNNNNNNGTC	1 cut(s)	608
EaeI	YGGCCR	3 cut(s)	154, 475, 996
EagI	CGGCCG	1 cut(s)	154
Eam1104I	CTCTTC	2 cut(s)	210, 376
Eam1105I	GACNNNNNGTC	1 cut(s)	1111
EarI	CTCTTC	2 cut(s)	210, 376
EciI	GGCGGA	3 cut(s)	312, 989, 1118
Ecl136II	GAGCTC	1 cut(s)	658
EclXI	CGGCCG	1 cut(s)	154
Eco130I	CCWWGG	1 cut(s)	576
Eco24I	GRGCYC	1 cut(s)	660
Eco47I	GGWCC	6 cut(s)	69, 186, 601, 610, 687, 964
Eco52I	CGGCCG	1 cut(s)	154
Eco53kI	GAGCTC	1 cut(s)	658
Eco57I	CTGAAG	1 cut(s)	27
Eco72I	CACGTG	1 cut(s)	278
Eco88I	CYCGRG	2 cut(s)	73, 195
EcoICRI	GAGCTC	1 cut(s)	658
EcoRI	GAATTC	1 cut(s)	1129
EcoRII	CCWGG	2 cut(s)	540, 1179
EcoT14I	CCWWGG	1 cut(s)	576
EcoT38I	GRGCYC	1 cut(s)	660
EgeI	GGCGCC	2 cut(s)	80, 775
EheI	GGCGCC	2 cut(s)	80, 775
ErhI	CCWWGG	1 cut(s)	576
Esp3I	CGTCTC	2 cut(s)	420, 736
FaeI	CATG	9 cut(s)	130, 302, 494, 524, 580, 898, 964, 1057, 1238
FalI	AAGNNNNNCTT	2 cut(s)	25, 57
FaqI	GGGAC	5 cut(s)	212, 614, 624, 878, 1028
FatI	CATG	9 cut(s)	126, 298, 490, 520, 576, 894, 960, 1053, 1234
FauI	CCCGC	4 cut(s)	321, 330, 354, 758
FokI	GGATG	2 cut(s)	266, 462
FriOI	GRGCYC	1 cut(s)	660
FspBI	CTAG	2 cut(s)	23, 873
GlaI	GCGC	7 cut(s)	80, 350, 754, 775, 851, 1068, 1147
HaeII	RGCGCY	2 cut(s)	82, 777
HaeIII	GGCC	6 cut(s)	156, 477, 870, 998, 1008, 1178
HgaI	GACGC	6 cut(s)	404, 440, 686, 1033, 1084, 1160
HhaI	GCGC	7 cut(s)	81, 351, 755, 776, 852, 1069, 1148
Hin1I	GRCGYC	6 cut(s)	79, 396, 678, 774, 1044, 1152
Hin1II	CATG	9 cut(s)	130, 302, 494, 524, 580, 898, 964, 1057, 1238
Hin6I	GCGC	7 cut(s)	79, 349, 753, 774, 850, 1067, 1146
HinP1I	GCGC	7 cut(s)	79, 349, 753, 774, 850, 1067, 1146
HindIII	AAGCTT	4 cut(s)	170, 291, 586, 1083
HphI	GGTGA	4 cut(s)	401, 721, 964, 1106
Hpy166II	GTNNAC	2 cut(s)	469, 690
Hpy188I	TCNGA	9 cut(s)	223, 439, 445, 636, 796, 884, 943, 1135, 1198
Hpy188III	TCNNGA	8 cut(s)	197, 425, 529, 613, 716, 829, 900, 1245
Hpy8I	GTNNAC	2 cut(s)	469, 690
Hpy99I	CGWCG	7 cut(s)	434, 476, 680, 701, 1007, 1049, 1154
HpyAV	CCTTC	2 cut(s)	369, 562
HpyCH4III	ACNGT	3 cut(s)	464, 482, 930
HpyCH4IV	ACGT	6 cut(s)	211, 277, 933, 1017, 1098, 1203
HpyCH4V	TGCA	5 cut(s)	136, 298, 507, 520, 648
HpyF3I	CTNAG	1 cut(s)	633
HpySE526I	ACGT	6 cut(s)	211, 277, 933, 1017, 1098, 1203
Hsp92I	GRCGYC	6 cut(s)	79, 396, 678, 774, 1044, 1152
Hsp92II	CATG	9 cut(s)	130, 302, 494, 524, 580, 898, 964, 1057, 1238
HspAI	GCGC	7 cut(s)	79, 349, 753, 774, 850, 1067, 1146
KasI	GGCGCC	2 cut(s)	78, 773
Kpn2I	TCCGGA	2 cut(s)	715, 828
KspI	CCGCGG	1 cut(s)	329
LmnI	GCTCC	5 cut(s)	68, 580, 663, 831, 943
Lsp1109I	GCAGC	3 cut(s)	2, 148, 810
LweI	GCATC	2 cut(s)	440, 641
MaeI	CTAG	2 cut(s)	23, 873
MaeII	ACGT	6 cut(s)	211, 277, 933, 1017, 1098, 1203
MaeIII	GTNAC	3 cut(s)	709, 952, 1094
MboII	GAAGA	6 cut(s)	227, 393, 404, 548, 733, 1084
MfeI	CAATTG	1 cut(s)	736
MflI	RGATCY	1 cut(s)	91
MhlI	GDGCHC	3 cut(s)	660, 762, 891
MlsI	TGGCCA	1 cut(s)	998
MluCI	AATT	3 cut(s)	9, 736, 1129
MluNI	TGGCCA	1 cut(s)	998
Mly113I	GGCGCC	2 cut(s)	79, 774
MlyI	GAGTC	8 cut(s)	227, 293, 434, 646, 706, 740, 885, 1121
MmeI	TCCRAC	4 cut(s)	7, 201, 462, 1158
Mox20I	TGGCCA	1 cut(s)	998
MroI	TCCGGA	2 cut(s)	715, 828
MroXI	GAANNNNTTC	1 cut(s)	589
MscI	TGGCCA	1 cut(s)	998
MseI	TTAA	1 cut(s)	105
MslI	CAYNNNNRTG	1 cut(s)	131
Msp20I	TGGCCA	1 cut(s)	998
MspA1I	CMGCKG	1 cut(s)	328
MspR9I	CCNGG	4 cut(s)	67, 542, 619, 1181
MunI	CAATTG	1 cut(s)	736
MvaI	CCWGG	2 cut(s)	542, 1181
MvnI	CGCG	6 cut(s)	328, 349, 753, 852, 901, 1078
NarI	GGCGCC	2 cut(s)	79, 774
NciI	CCSGG	2 cut(s)	67, 619
NcoI	CCATGG	1 cut(s)	576
NlaIII	CATG	9 cut(s)	130, 302, 494, 524, 580, 898, 964, 1057, 1238
NlaIV	GGNNCC	7 cut(s)	80, 342, 358, 623, 688, 775, 945
NmuCI	GTSAC	3 cut(s)	709, 952, 1094
NruI	TCGCGA	1 cut(s)	901
NspI	RCATGY	2 cut(s)	302, 1057
NspV	TTCGAA	1 cut(s)	593
PaeI	GCATGC	1 cut(s)	302
PaeR7I	CTCGAG	1 cut(s)	73
PcsI	WCGNNNNNNNCGW	3 cut(s)	315, 435, 468
PdmI	GAANNNNTTC	1 cut(s)	589
PfeI	GAWTC	2 cut(s)	406, 991
Pfl23II	CGTACG	2 cut(s)	930, 1048
PflFI	GACNNNGTC	1 cut(s)	1019
PfoI	TCCNGGA	1 cut(s)	65
PleI	GAGTC	8 cut(s)	226, 292, 434, 645, 706, 740, 884, 1120
PluTI	GGCGCC	2 cut(s)	82, 777
PmaCI	CACGTG	1 cut(s)	278
PmlI	CACGTG	1 cut(s)	278
PpsI	GAGTC	8 cut(s)	226, 292, 434, 645, 706, 740, 884, 1120
Ppu21I	YACGTR	1 cut(s)	278
Psp124BI	GAGCTC	1 cut(s)	660
Psp6I	CCWGG	2 cut(s)	540, 1179
PspCI	CACGTG	1 cut(s)	278
PspGI	CCWGG	2 cut(s)	540, 1179
PspLI	CGTACG	2 cut(s)	930, 1048
PspN4I	GGNNCC	7 cut(s)	80, 342, 358, 623, 688, 775, 945
PspPI	GGNCC	8 cut(s)	69, 186, 601, 610, 687, 869, 964, 1177
PspXI	VCTCGAGB	1 cut(s)	73
PstI	CTGCAG	1 cut(s)	650
PsuI	RGATCY	1 cut(s)	91
PsyI	GACNNNGTC	1 cut(s)	1019
RruI	TCGCGA	1 cut(s)	901
RsaI	GTAC	2 cut(s)	932, 1050
RsaNI	GTAC	2 cut(s)	931, 1049
RseI	CAYNNNNRTG	1 cut(s)	131
SacI	GAGCTC	1 cut(s)	660
SacII	CCGCGG	1 cut(s)	329
SaqAI	TTAA	1 cut(s)	105
Sau96I	GGNCC	8 cut(s)	69, 186, 601, 610, 687, 869, 964, 1177
SchI	GAGTC	8 cut(s)	227, 293, 434, 646, 706, 740, 885, 1121
ScrFI	CCNGG	4 cut(s)	67, 542, 619, 1181
SduI	GDGCHC	3 cut(s)	660, 762, 891
SfaNI	GCATC	2 cut(s)	440, 641
SfcI	CTRYAG	1 cut(s)	646
SfoI	GGCGCC	2 cut(s)	80, 775
Sfr274I	CTCGAG	1 cut(s)	73
Sfr303I	CCGCGG	1 cut(s)	329
SfuI	TTCGAA	1 cut(s)	593
SgrBI	CCGCGG	1 cut(s)	329
SinI	GGWCC	6 cut(s)	69, 186, 601, 610, 687, 964
SlaI	CTCGAG	1 cut(s)	73
SmiMI	CAYNNNNRTG	1 cut(s)	131
SmlI	CTYRAG	1 cut(s)	73
SmoI	CTYRAG	1 cut(s)	73
SphI	GCATGC	1 cut(s)	302
Sse9I	AATT	3 cut(s)	9, 736, 1129
SspDI	GGCGCC	2 cut(s)	78, 773
SspMI	CTAG	2 cut(s)	23, 873
SstI	GAGCTC	1 cut(s)	660
StyD4I	CCNGG	4 cut(s)	65, 540, 617, 1179
StyI	CCWWGG	1 cut(s)	576
TaaI	ACNGT	3 cut(s)	464, 482, 930
TaiI	ACGT	6 cut(s)	214, 280, 936, 1020, 1101, 1206
TaqI	TCGA	7 cut(s)	50, 74, 101, 404, 424, 593, 834
TaqII	GACCGA	1 cut(s)	825
TasI	AATT	3 cut(s)	9, 736, 1129
TauI	GCSGC	9 cut(s)	119, 156, 166, 328, 744, 779, 842, 1044, 1125
TfiI	GAWTC	2 cut(s)	406, 991
Tru1I	TTAA	1 cut(s)	105
Tru9I	TTAA	1 cut(s)	105
TscAI	CASTG	1 cut(s)	677
TseFI	GTSAC	3 cut(s)	709, 952, 1094
TseI	GCWGC	3 cut(s)	15, 136, 823
Tsp45I	GTSAC	3 cut(s)	709, 952, 1094
TspRI	CASTG	1 cut(s)	677
Tth111I	GACNNNGTC	1 cut(s)	1019
VpaK11BI	GGWCC	6 cut(s)	69, 186, 601, 610, 687, 964
XapI	RAATTY	2 cut(s)	9, 1129
XceI	RCATGY	2 cut(s)	302, 1057
XcmI	CCANNNNNNNNNTGG	1 cut(s)	697
XhoI	CTCGAG	1 cut(s)	73
XmnI	GAANNNNTTC	1 cut(s)	589
XspI	CTAG	2 cut(s)	23, 873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.