Rorug01G0390600

Embryo-specific protein 3, (ATS3)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0014997
Physical Location & Seq
Forward (+)
50132093 .. 50136305
4213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0390600.1

Sequence Viewer

Length: 1443 bp
ATGGATTTCCTTCTCTCATTTCTACTATCTCTTTGTCTCTTTTCAACCCTTACCATATTCTTTCTTCTCCGGAATTCTCGTTGCCGGAGACTCAGACTCCCGCCGGGAAACCTTGGCCTGCCCTTTATAGGCGAAACATGGCAACTCATCTCGGCTTACAAGACCGAGAACCCGGAACCGTTTATCGACGAGCGGGTCAACCGGTTCGGACCAATCTTCACGACGCACGTGTTCGGCGAGCCGACAGTGTTTTCCTCCGACCCGGAGACGAACCGGTTCATTCTGCAGAACGAAGGGAAGCTGTTCGAGTGTAGCTACCCGAGCTCCATATCCAACTTGTTGGGAAAGCACTCGTTGCTGTTGATGAAGGGAACTCTCCATAAAAAAATGCACTCTCTCACTATGAGCTTCGCAAACTCATCGATTATCAAAGATCATCTTTTGGTCGATATAGACCGGTTGATCCGGCTCAACATGGACTCCTGGACCGGCCGGATCCTTCTCATGGAAGAGGCCAAGAAGATTACCTTTGAGCTAGCAGTGAAGCAGCTAATGAGCTTCGATCCCGGCGAATGGACGGAAAGTTTGAGGAAAGAGTACGTCTTGCTCATCGAAGGCTTCTTCAGCGTCCCCTTACCTCTCTTCTCCACCACTTACCGGCGGGCCATTAAAGCGAGGACGAAGGTGGCGGAGGCATTGAGATTGATAGTGAGGCAGAGGAGGAGGGAGAGCGAGGAAGGGAAGAGGAAAGAGGACATGTTGGGTGCTCTGTTGGCCGGAGACAATGTCAATGGATTCTCCGACGAGGAGATTGTGGATTTCCTGCTTGCTTTGCTGGTTGCCGGATATGAAACGACGTCAACAATCATGACTCTTGCCGTGAAGTTCTTAACGGAGACACCTCTGGCCCATGCTCAACTCAAGGAAGAACATGACCAGATTCGGATGAAAAAGAGGGGGTCATCGGAGGCTCTGGAATGGAGTGATTACAAGTCAATGCCATTCACCCAATGTGTTGTGAACGAGACGTTGCGAGTTGCAAACATTATTGGTGGAGTATTTAGGAGGGCAATGACAGACGTTAATATTAAAGGCTATACGATACCAAAAGGCTGGAAGGTATTTGCTTCATTTCGGGCTGTGCATTTAGACCACGATCATTTCAAGGCCGCTCGCACTTTTAATCCATGGAGGTGGCAGCAGAACGACGCTGGAGCTCCCCCAAGCCCGGTAAATGTGTTCACACCATTTGGAGGAGGGCCGAGGCTGTGCCCTGGTTACGAACTAGCTAGAGTAGAACTCTCAGTTTTTCTTCACCACCTAGTCACCCGTTTCAGTTGGGTTCCTGCTGAAGACGATAAGTTGGTGTTCTTTCCAACTACAAGAACACAGAAGAAGTACCCTATCAATGTGCATCCCCGGAATGTGGTTGAGCATATGTAA

Protein Analysis

480

Amino Acids

55.04

Weight (kDa)

9.11

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 208 - 456 2.3e-55 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014997)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62200
fragaria_vesca FvH4_7g28400
malus_domestica MD01G1187700.v1.1 MD07G1259800.v1.1
prunus_persica Prupe.2G284100_v2.0.a1
pyrus_communis pycom01g19960 pycom07g23320
rosa_chinensis RchiOBHm_Chr1g0375361
rosa_laevigata RLG00000026668
rosa_rugosa Rorug01G0390500.1 Rorug01G0390600
rosa_samantha Rh1AG401000 Rh1BG363300 Rh1CG376600 Rh1DG394100
rosa_wichuraiana Rw1G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 194
AatII GACGTC 1 cut(s) 860
AccBSI CCGCTC 2 cut(s) 193, 1172
AccIII TCCGGA 1 cut(s) 69
AciI CCGC 5 cut(s) 101, 193, 661, 689, 1170
AclWI GGATC 4 cut(s) 457, 490, 503, 557
AcoI YGGCCR 2 cut(s) 490, 774
AcsI RAATTY 1 cut(s) 73
AcuI CTGAAG 2 cut(s) 607, 1371
AcvI CACGTG 1 cut(s) 229
AcyI GRCGYC 1 cut(s) 857
AfaI GTAC 2 cut(s) 599, 1400
AfiI CCNNNNNNNGG 7 cut(s) 128, 505, 573, 657, 1228, 1253, 1426
AflIII ACRYGT 2 cut(s) 228, 756
AgeI ACCGGT 3 cut(s) 201, 273, 456
AgsI TTSAA 2 cut(s) 45, 1165
AjnI CCWGG 2 cut(s) 482, 1273
AluBI AGCT 9 cut(s) 301, 315, 324, 408, 535, 550, 558, 1217, 1289
AluI AGCT 9 cut(s) 301, 315, 324, 408, 535, 550, 558, 1217, 1289
Alw21I GWGCWC 3 cut(s) 326, 769, 1219
Alw26I GTCTC 6 cut(s) 41, 82, 260, 774, 890, 1019
AlwI GGATC 4 cut(s) 457, 490, 503, 557
Ama87I CYCGRG 1 cut(s) 319
Aor13HI TCCGGA 1 cut(s) 69
AoxI GGCC 8 cut(s) 115, 490, 513, 663, 774, 906, 1167, 1259
ApeKI GCWGC 2 cut(s) 547, 1198
ApoI RAATTY 1 cut(s) 73
ArsI GACNNNNNNTTYG 2 cut(s) 568, 600
AsiGI ACCGGT 3 cut(s) 201, 273, 456
Asp700I GAANNNNTTC 2 cut(s) 275, 302
AspS9I GGNCC 5 cut(s) 209, 486, 663, 907, 1259
AsuC2I CCSGG 6 cut(s) 105, 173, 263, 567, 1229, 1420
AsuHPI GGTGA 3 cut(s) 997, 1307, 1318
AsuNHI GCTAGC 1 cut(s) 535
AvaI CYCGRG 1 cut(s) 319
AvaII GGWCC 2 cut(s) 209, 486
BaeGI GKGCMC 1 cut(s) 1274
BamHI GGATCC 1 cut(s) 495
BanII GRGCYC 2 cut(s) 326, 1219
BbrPI CACGTG 1 cut(s) 229
BbsI GAAGAC 1 cut(s) 1359
Bbv12I GWGCWC 3 cut(s) 326, 769, 1219
BbvI GCAGC 2 cut(s) 559, 1210
BceAI ACGGC 1 cut(s) 863
BcgI CGANNNNNNTGC 2 cut(s) 402, 436
BciT130I CCWGG 2 cut(s) 484, 1275
BcnI CCSGG 6 cut(s) 105, 173, 263, 567, 1229, 1420
BcoDI GTCTC 6 cut(s) 41, 82, 260, 774, 890, 1019
BfaI CTAG 4 cut(s) 536, 1286, 1290, 1322
BfmI CTRYAG 1 cut(s) 284
BisI GCNGC 3 cut(s) 548, 1170, 1199
BlsI GCNGC 3 cut(s) 549, 1171, 1200
Bme1390I CCNGG 8 cut(s) 105, 173, 263, 484, 567, 1229, 1275, 1420
Bme18I GGWCC 2 cut(s) 209, 486
BmeT110I CYCGRG 1 cut(s) 319
BmgT120I GGNCC 5 cut(s) 209, 486, 663, 907, 1259
BmiI GGNNCC 3 cut(s) 177, 497, 1344
BmrFI CCNGG 8 cut(s) 105, 173, 263, 484, 567, 1229, 1275, 1420
BmsI GCATC 1 cut(s) 1423
BmtI GCTAGC 1 cut(s) 539
BpiI GAAGAC 1 cut(s) 1359
BplI GAGNNNNNCTC 2 cut(s) 1284, 1316
BpmI CTGGAG 1 cut(s) 1233
BpuEI CTTGAG 1 cut(s) 905
BpuMI CCSGG 6 cut(s) 105, 173, 263, 567, 1229, 1420
Bsa29I ATCGAT 1 cut(s) 422
BsaAI YACGTR 1 cut(s) 229
BsaHI GRCGYC 1 cut(s) 857
BsaJI CCNNGG 5 cut(s) 112, 1187, 1262, 1273, 1418
BsaWI WCCGGW 4 cut(s) 69, 201, 273, 456
BsaXI ACNNNNNCTCC 8 cut(s) 81, 111, 308, 338, 464, 494, 771, 801
Bsc4I CCNNNNNNNGG 7 cut(s) 128, 505, 573, 657, 1228, 1253, 1426
Bse118I RCCGGY 5 cut(s) 201, 273, 456, 488, 657
Bse3DI GCAATG 1 cut(s) 1077
BseAI TCCGGA 1 cut(s) 69
BseBI CCWGG 2 cut(s) 484, 1275
BseCI ATCGAT 1 cut(s) 422
BseDI CCNNGG 5 cut(s) 112, 1187, 1262, 1273, 1418
BseGI GGATG 2 cut(s) 951, 1414
BseLI CCNNNNNNNGG 7 cut(s) 128, 505, 573, 657, 1228, 1253, 1426
BseMI GCAATG 1 cut(s) 1077
BseMII CTCAG 2 cut(s) 106, 1317
BseRI GAGGAG 4 cut(s) 733, 736, 821, 1269
BseSI GKGCMC 1 cut(s) 1274
BseX3I CGGCCG 1 cut(s) 490
BseXI GCAGC 2 cut(s) 559, 1210
Bsh1285I CGRYCG 1 cut(s) 493
BshFI GGCC 8 cut(s) 117, 492, 515, 665, 776, 908, 1169, 1261
BshTI ACCGGT 3 cut(s) 201, 273, 456
BshVI ATCGAT 1 cut(s) 422
BsiEI CGRYCG 1 cut(s) 493
BsiHKAI GWGCWC 3 cut(s) 326, 769, 1219
BsiHKCI CYCGRG 1 cut(s) 319
BslFI GGGAC 1 cut(s) 614
BslI CCNNNNNNNGG 7 cut(s) 128, 505, 573, 657, 1228, 1253, 1426
BsmAI GTCTC 6 cut(s) 41, 82, 260, 774, 890, 1019
BsmBI CGTCTC 2 cut(s) 260, 1019
BsmFI GGGAC 1 cut(s) 614
BsnI GGCC 8 cut(s) 117, 492, 515, 665, 776, 908, 1169, 1261
BsoBI CYCGRG 1 cut(s) 319
Bsp1286I GDGCHC 4 cut(s) 326, 769, 1219, 1274
Bsp13I TCCGGA 1 cut(s) 69
Bsp143I GATC 5 cut(s) 433, 462, 495, 562, 1156
Bsp19I CCATGG 1 cut(s) 1187
BspACI CCGC 5 cut(s) 101, 193, 661, 689, 1170
BspANI GGCC 8 cut(s) 117, 492, 515, 665, 776, 908, 1169, 1261
BspCNI CTCAG 2 cut(s) 105, 1316
BspDI ATCGAT 1 cut(s) 422
BspEI TCCGGA 1 cut(s) 69
BspHI TCATGA 1 cut(s) 867
BspLI GGNNCC 3 cut(s) 177, 497, 1344
BspMAI CTGCAG 1 cut(s) 288
BspOI GCTAGC 1 cut(s) 539
BspPI GGATC 4 cut(s) 457, 490, 503, 557
BsrBI CCGCTC 2 cut(s) 193, 1172
BsrDI GCAATG 1 cut(s) 1077
BsrFI RCCGGY 5 cut(s) 201, 273, 456, 488, 657
BssAI RCCGGY 5 cut(s) 201, 273, 456, 488, 657
BssECI CCNNGG 5 cut(s) 112, 1187, 1262, 1273, 1418
BssMI GATC 5 cut(s) 433, 462, 495, 562, 1156
BssNI GRCGYC 1 cut(s) 857
BssT1I CCWWGG 2 cut(s) 112, 1187
Bst2UI CCWGG 2 cut(s) 484, 1275
Bst4CI ACNGT 2 cut(s) 180, 247
Bst6I CTCTTC 3 cut(s) 504, 647, 737
BstACI GRCGYC 1 cut(s) 857
BstAPI GCANNNNNTGC 1 cut(s) 355
BstBAI YACGTR 1 cut(s) 229
BstC8I GCNNGC 6 cut(s) 119, 239, 537, 663, 828, 1174
BstDEI CTNAG 2 cut(s) 92, 1303
BstDSI CCRYGG 1 cut(s) 1187
BstF5I GGATG 2 cut(s) 951, 1414
BstKTI GATC 5 cut(s) 436, 465, 498, 565, 1159
BstMAI GTCTC 6 cut(s) 41, 82, 260, 774, 890, 1019
BstMBI GATC 5 cut(s) 433, 462, 495, 562, 1156
BstMCI CGRYCG 1 cut(s) 493
BstMWI GCNNNNNNNGC 6 cut(s) 321, 355, 624, 671, 773, 832
BstNI CCWGG 2 cut(s) 484, 1275
BstNSI RCATGY 1 cut(s) 760
BstSCI CCNGG 8 cut(s) 103, 171, 261, 482, 565, 1227, 1273, 1418
BstSFI CTRYAG 1 cut(s) 284
BstSLI GKGCMC 1 cut(s) 1274
BstV1I GCAGC 2 cut(s) 559, 1210
BstV2I GAAGAC 1 cut(s) 1359
BstX2I RGATCY 1 cut(s) 495
BstXI CCANNNNNNTGG 3 cut(s) 340, 1113, 1194
BstYI RGATCY 1 cut(s) 495
BstZI CGGCCG 1 cut(s) 490
Bsu15I ATCGAT 1 cut(s) 422
BsuRI GGCC 8 cut(s) 117, 492, 515, 665, 776, 908, 1169, 1261
BsuTUI ATCGAT 1 cut(s) 422
BtgI CCRYGG 1 cut(s) 1187
BtsCI GGATG 2 cut(s) 951, 1414
BtsI GCAGTG 1 cut(s) 546
BtsIMutI CAGTG 2 cut(s) 252, 546
Cac8I GCNNGC 6 cut(s) 119, 239, 537, 663, 828, 1174
CciI TCATGA 1 cut(s) 867
Cfr10I RCCGGY 5 cut(s) 201, 273, 456, 488, 657
Cfr13I GGNCC 5 cut(s) 209, 486, 663, 907, 1259
ClaI ATCGAT 1 cut(s) 422
CseI GACGC 3 cut(s) 232, 616, 1217
Csp6I GTAC 2 cut(s) 598, 1399
CspAI ACCGGT 3 cut(s) 201, 273, 456
CviAII CATG 8 cut(s) 138, 475, 505, 757, 868, 911, 932, 1188
CviQI GTAC 2 cut(s) 598, 1399
DdeI CTNAG 2 cut(s) 92, 1303
DpnI GATC 5 cut(s) 435, 464, 497, 564, 1158
DpnII GATC 5 cut(s) 433, 462, 495, 562, 1156
DrdI GACNNNNNNGTC 1 cut(s) 194
DseDI GACNNNNNNGTC 1 cut(s) 194
EaeI YGGCCR 2 cut(s) 490, 774
EagI CGGCCG 1 cut(s) 490
Eam1104I CTCTTC 3 cut(s) 504, 647, 737
EarI CTCTTC 3 cut(s) 504, 647, 737
EciI GGCGGA 1 cut(s) 704
Ecl136II GAGCTC 2 cut(s) 324, 1217
EclXI CGGCCG 1 cut(s) 490
Eco130I CCWWGG 2 cut(s) 112, 1187
Eco24I GRGCYC 2 cut(s) 326, 1219
Eco47I GGWCC 2 cut(s) 209, 486
Eco52I CGGCCG 1 cut(s) 490
Eco53kI GAGCTC 2 cut(s) 324, 1217
Eco57I CTGAAG 2 cut(s) 607, 1371
Eco72I CACGTG 1 cut(s) 229
Eco88I CYCGRG 1 cut(s) 319
EcoICRI GAGCTC 2 cut(s) 324, 1217
EcoRI GAATTC 1 cut(s) 73
EcoRII CCWGG 2 cut(s) 482, 1273
EcoT14I CCWWGG 2 cut(s) 112, 1187
EcoT38I GRGCYC 2 cut(s) 326, 1219
ErhI CCWWGG 2 cut(s) 112, 1187
Esp3I CGTCTC 2 cut(s) 260, 1019
FaeI CATG 8 cut(s) 141, 478, 508, 760, 871, 914, 935, 1191
FalI AAGNNNNNCTT 4 cut(s) 423, 455, 512, 544
FaqI GGGAC 1 cut(s) 614
FatI CATG 8 cut(s) 137, 474, 504, 756, 867, 910, 931, 1187
FauI CCCGC 3 cut(s) 108, 186, 654
FauNDI CATATG 1 cut(s) 1437
Fnu4HI GCNGC 3 cut(s) 548, 1170, 1199
FokI GGATG 2 cut(s) 958, 1401
FriOI GRGCYC 2 cut(s) 326, 1219
Fsp4HI GCNGC 3 cut(s) 548, 1170, 1199
FspBI CTAG 4 cut(s) 536, 1286, 1290, 1322
GluI GCNGC 3 cut(s) 548, 1170, 1199
GsuI CTGGAG 1 cut(s) 1233
HaeIII GGCC 8 cut(s) 117, 492, 515, 665, 776, 908, 1169, 1261
HgaI GACGC 3 cut(s) 232, 616, 1217
Hin1I GRCGYC 1 cut(s) 857
Hin1II CATG 8 cut(s) 141, 478, 508, 760, 871, 914, 935, 1191
HincII GTYRAC 2 cut(s) 199, 861
HindII GTYRAC 2 cut(s) 199, 861
HinfI GANTC 6 cut(s) 90, 96, 479, 795, 871, 940
HphI GGTGA 3 cut(s) 997, 1307, 1318
Hpy166II GTNNAC 4 cut(s) 199, 861, 1021, 1242
Hpy188I TCNGA 6 cut(s) 95, 209, 259, 802, 945, 967
Hpy188III TCNNGA 4 cut(s) 70, 220, 868, 974
Hpy8I GTNNAC 4 cut(s) 199, 861, 1021, 1242
Hpy99I CGWCG 5 cut(s) 191, 226, 806, 859, 1211
HpyAV CCTTC 8 cut(s) 20, 287, 361, 509, 608, 676, 731, 1111
HpyCH4III ACNGT 2 cut(s) 180, 247
HpyCH4IV ACGT 5 cut(s) 228, 600, 857, 1028, 1080
HpyCH4V TGCA 5 cut(s) 286, 391, 1040, 1144, 1414
HpyF10VI GCNNNNNNNGC 6 cut(s) 321, 355, 624, 671, 773, 832
HpyF3I CTNAG 2 cut(s) 92, 1303
HpySE526I ACGT 5 cut(s) 228, 600, 857, 1028, 1080
Hsp92I GRCGYC 1 cut(s) 857
Hsp92II CATG 8 cut(s) 141, 478, 508, 760, 871, 914, 935, 1191
Kpn2I TCCGGA 1 cut(s) 69
Kzo9I GATC 5 cut(s) 433, 462, 495, 562, 1156
LmnI GCTCC 3 cut(s) 329, 1214, 1222
Lsp1109I GCAGC 2 cut(s) 559, 1210
LweI GCATC 1 cut(s) 1423
MaeI CTAG 4 cut(s) 536, 1286, 1290, 1322
MaeII ACGT 5 cut(s) 228, 600, 857, 1028, 1080
MaeIII GTNAC 2 cut(s) 1277, 1324
MalI GATC 5 cut(s) 435, 464, 497, 564, 1158
MbiI CCGCTC 2 cut(s) 193, 1172
MboI GATC 5 cut(s) 433, 462, 495, 562, 1156
MflI RGATCY 1 cut(s) 495
MhlI GDGCHC 4 cut(s) 326, 769, 1219, 1274
MluCI AATT 1 cut(s) 73
MlyI GAGTC 4 cut(s) 84, 90, 473, 865
MmeI TCCRAC 4 cut(s) 282, 357, 825, 1400
MroI TCCGGA 1 cut(s) 69
MroXI GAANNNNTTC 2 cut(s) 275, 302
MseI TTAA 5 cut(s) 669, 890, 1083, 1089, 1182
MslI CAYNNNNRTG 1 cut(s) 1192
MspR9I CCNGG 8 cut(s) 105, 173, 263, 484, 567, 1229, 1275, 1420
MvaI CCWGG 2 cut(s) 484, 1275
MwoI GCNNNNNNNGC 6 cut(s) 321, 355, 624, 671, 773, 832
NciI CCSGG 6 cut(s) 105, 173, 263, 567, 1229, 1420
NcoI CCATGG 1 cut(s) 1187
NdeI CATATG 1 cut(s) 1437
NdeII GATC 5 cut(s) 433, 462, 495, 562, 1156
NheI GCTAGC 1 cut(s) 535
NlaIII CATG 8 cut(s) 141, 478, 508, 760, 871, 914, 935, 1191
NlaIV GGNNCC 3 cut(s) 177, 497, 1344
NmeAIII GCCGAG 2 cut(s) 131, 1287
NmuCI GTSAC 1 cut(s) 1324
NspI RCATGY 1 cut(s) 760
PagI TCATGA 1 cut(s) 867
PciI ACATGT 1 cut(s) 756
PcsI WCGNNNNNNNCGW 2 cut(s) 234, 567
PdmI GAANNNNTTC 2 cut(s) 275, 302
PfeI GAWTC 2 cut(s) 795, 940
PflFI GACNNNGTC 1 cut(s) 785
PfoI TCCNGGA 1 cut(s) 482
PinAI ACCGGT 3 cut(s) 201, 273, 456
PkrI GCNGC 3 cut(s) 549, 1171, 1200
PleI GAGTC 4 cut(s) 84, 90, 473, 865
PmaCI CACGTG 1 cut(s) 229
PmlI CACGTG 1 cut(s) 229
PpsI GAGTC 4 cut(s) 84, 90, 473, 865
Ppu21I YACGTR 1 cut(s) 229
PscI ACATGT 1 cut(s) 756
Psp124BI GAGCTC 2 cut(s) 326, 1219
Psp6I CCWGG 2 cut(s) 482, 1273
PspCI CACGTG 1 cut(s) 229
PspGI CCWGG 2 cut(s) 482, 1273
PspN4I GGNNCC 3 cut(s) 177, 497, 1344
PspPI GGNCC 5 cut(s) 209, 486, 663, 907, 1259
PstI CTGCAG 1 cut(s) 288
PsuI RGATCY 1 cut(s) 495
PsyI GACNNNGTC 1 cut(s) 785
RsaI GTAC 2 cut(s) 599, 1400
RsaNI GTAC 2 cut(s) 598, 1399
RseI CAYNNNNRTG 1 cut(s) 1192
SacI GAGCTC 2 cut(s) 326, 1219
SaqAI TTAA 5 cut(s) 669, 890, 1083, 1089, 1182
SatI GCNGC 3 cut(s) 548, 1170, 1199
Sau3AI GATC 5 cut(s) 433, 462, 495, 562, 1156
Sau96I GGNCC 5 cut(s) 209, 486, 663, 907, 1259
SchI GAGTC 4 cut(s) 84, 90, 473, 865
ScrFI CCNGG 8 cut(s) 105, 173, 263, 484, 567, 1229, 1275, 1420
SduI GDGCHC 4 cut(s) 326, 769, 1219, 1274
SfaNI GCATC 1 cut(s) 1423
SfcI CTRYAG 1 cut(s) 284
SinI GGWCC 2 cut(s) 209, 486
SmiMI CAYNNNNRTG 1 cut(s) 1192
SmlI CTYRAG 1 cut(s) 920
SmoI CTYRAG 1 cut(s) 920
Sse9I AATT 1 cut(s) 73
SsiI CCGC 5 cut(s) 101, 193, 661, 689, 1170
SspI AATATT 1 cut(s) 1087
SspMI CTAG 4 cut(s) 536, 1286, 1290, 1322
SstI GAGCTC 2 cut(s) 326, 1219
StyD4I CCNGG 8 cut(s) 103, 171, 261, 482, 565, 1227, 1273, 1418
StyI CCWWGG 2 cut(s) 112, 1187
TaaI ACNGT 2 cut(s) 180, 247
TaiI ACGT 5 cut(s) 231, 603, 860, 1031, 1083
TaqI TCGA 6 cut(s) 186, 306, 422, 447, 561, 612
TaqII GACCGA 1 cut(s) 179
TasI AATT 1 cut(s) 73
TauI GCSGC 1 cut(s) 1172
TfiI GAWTC 2 cut(s) 795, 940
Tru1I TTAA 5 cut(s) 669, 890, 1083, 1089, 1182
Tru9I TTAA 5 cut(s) 669, 890, 1083, 1089, 1182
TscAI CASTG 2 cut(s) 252, 546
TseFI GTSAC 1 cut(s) 1324
TseI GCWGC 2 cut(s) 547, 1198
Tsp45I GTSAC 1 cut(s) 1324
TspDTI ATGAA 5 cut(s) 268, 380, 864, 962, 1119
TspGWI ACGGA 2 cut(s) 593, 908
TspRI CASTG 2 cut(s) 252, 546
Tth111I GACNNNGTC 1 cut(s) 785
VpaK11BI GGWCC 2 cut(s) 209, 486
XapI RAATTY 1 cut(s) 73
XceI RCATGY 1 cut(s) 760
XmnI GAANNNNTTC 2 cut(s) 275, 302
XspI CTAG 4 cut(s) 536, 1286, 1290, 1322
ZraI GACGTC 1 cut(s) 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.