Rorug01G0400300

arabinose-5-phosphate isomerase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0015357
Physical Location & Seq
Forward (+)
50898630 .. 50900770
2141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0400300.1

Sequence Viewer

Length: 2055 bp
ATGGGTGTAGTATACTCTCTGTTCCTAACTGCAGTGAAACTTGACCTGGGCATGCTCAAAAGGACGGCAAAGACTTCCTGGAAGATTTTTCTAGCAAGCCTCCTTTGTCCTACAGTAGTCTTCTTCAGCTTCGTTTACCCACTAGCCGGCGCAGTTCCTGGATTCAGTGGAGGAAAAGTCATGCTCTTCTGGACTACGAGTTCTTTATCTTTCACTTATTTCCCAGTCATAGCTCAAGCATTGGATGAACTCAACCTTTTGACTTCAGAGTTGGGCCAACTTGCCTTGTCTGCCTCAATGCTCAACGATGCACTGCAATGGTTCTTAACAGCATTGAACGTTGTAGTTATGCAAGAAAAAGTAATATATTCAAATGGGATTATCTTTTCCTTATTTGCGTGGGTAATTTTCACTTTGTATGTTGCACGCCCACTTATGCTATTTACAGTTAAGAATACGCCAGAAGGATACCAGCCGAAGGAAATTTATGTAGTTGCAATACAACTTGGAGTTCTATTCATGGCCTTTATGTCTGACGCCATAGGCATGAGCCATATGGCTGGTCCTATAATCCTGGGGTTGGCCGTACCAGATGGACAACTTGGTGCAACATTAATAGCCAAGACCGAATACTTGGTCTCCGAAGTCTTTCTGCCACTGTTCTTTTTCCGAATTGGCACCAGCATAGATATGTACAAGATTAGCCGTTGGGTGAGTTTTACCAAACTTCAGGCTATCATTACAGCGTTTTATGCTGCAAAGACTATGGGAATTACAATGGCTGGATTATTTTCCAAAATTAGCTTCAAAAACAGTCTCGTACTCAGCATGATGATGAATATCAAGGGTATACTGGAGCTTATTCTTTATAATGGATGGTTGTCCATGAAGCTTATAGATGAACAATTTTTTGCCCAAATGGTGTTCTCTCTGCTGGCGATGACCATGCTTGTAACCCCAATGATACGATTCTCGTACATTCCTCCTATTTGGGTTGGATCAAAAACCAATGGTCCACAGGTCAAACACATTCAATCAATGGCAAGTAAGTCTGAAACATTTCGCATTCTCTGCTGTGTCCACAACGAAGAAAGTGTCCACAGCATCATTACACTCCTGGAAGCCTCAAATCCAACAGAAGCGAGCCCCGTCACTGCCTATGTTGTCCACGCACTCCACTACATTGGCCGTGCTGCACCAGTACTAGTCCCTTACAAGAAGCATAAAAAAAAATTTAAGCGGTCAGATACAGCAAGTGATCAAATCGTTCAAGCCTTTGAGAATTACTCAAAAAACTCTGGAGGACCAGTCTCAATTCAAGCCTACACTATGGTCAATCCCTACAAATACATGCACCAGACCATTTTCCGTCTCGCTCAGGACCAGCTAGTACCTCTGATCATCATTCCATTCCATGAAAATCACCAGTCTCTTGTTGACTCCAATATGACTGGTCCGATACGCCAATTCAACCTTAATGTTCAGGCATATTCTCCATGCACAGTGGGAATACTAGTTGATAGAGGCTCGCATTCTCGGATGAGCTTTTCGAGTTTCTTCTACAACATTGCTGTTTTTTTCATTGGCGGACCAGATGACCGCGAGGCATTAGCCTACACTTCACGCATGTGTGACAACCCAGAATTGGAACTCACGGTGTTCAGGATAATTGTGCGAATCAATAAATCAAAATGTATAGAAGAGGAGACAGAGTTCAAGCTTGACGAGTCATTGGTTCAGGAGTTTAAGCTACGGAACCTTGGGAATGATCGATTGAATTGGCATGACATCGAGGTGGATGACTGGGTACAGGTTATGACTGCCATTAGTAGCTCGCAAGGACACTATGACCTTGTGATGGTTGGGAAGCGACATTCAGATATATCTTTGAGGGATGAAGAAATGGTAGAGTTCGTGCAAAATTCAGAGCTGGGAGTGATTGGCGACATGCTTGCTTCATCAGATTTCTGTGGTGGAACAGTGAATGTGTTAGTGATGCAGGAGAGTAGGGACTTGGGAATTGGAGCTTTTCGTTGTGACTCCTTGAAAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

684

Amino Acids

76.65

Weight (kDa)

6.55

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 2 - 321 4e-29 Sodium/hydrogen exchanger, transmembrane
CHX17_C PF23259 523 - 668 2.6e-08 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015357)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52190
fragaria_vesca FvH4_7g29240
malus_domestica MD01G1199000.v1.1 MD07G1266800.v1.1
prunus_persica Prupe.2G292400_v2.0.a1
pyrus_communis pycom07g24460
rosa_chinensis RchiOBHm_Chr1g0376991
rosa_laevigata RLG00000026553
rosa_multiflora Rmu_ssc0000155.1_g000031
rosa_roxburghii Rroxscaffold_4G00281570
rosa_rugosa Rorug01G0400300
rosa_samantha Rh1AG417400 Rh1BG376800 Rh1CG390600 Rh1DG407500
rosa_wichuraiana Rw1G036640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 870
AccB1I GGYRCC 1 cut(s) 677
AccI GTMKAC 2 cut(s) 12, 850
AccII CGCG 1 cut(s) 1602
AciI CCGC 3 cut(s) 1240, 1587, 1600
AclI AACGTT 1 cut(s) 339
AclWI GGATC 1 cut(s) 1006
AcoI YGGCCR 2 cut(s) 582, 1186
AcsI RAATTY 3 cut(s) 483, 1232, 1921
AcuI CTGAAG 3 cut(s) 109, 249, 713
AcyI GRCGYC 1 cut(s) 537
AfaI GTAC 7 cut(s) 588, 695, 822, 977, 1203, 1392, 1809
AfiI CCNNNNNNNGG 5 cut(s) 146, 478, 580, 1645, 1858
AhlI ACTAGT 2 cut(s) 1204, 1513
AjnI CCWGG 5 cut(s) 45, 77, 157, 573, 1116
AjuI GAANNNNNNNTTGG 2 cut(s) 788, 820
AleI CACNNNNGTG 1 cut(s) 1627
AloI GAACNNNNNNTCC 4 cut(s) 184, 216, 1697, 1729
Alw26I GTCTC 6 cut(s) 643, 821, 1315, 1376, 1434, 1700
AlwI GGATC 1 cut(s) 1006
AlwNI CAGNNNCTG 1 cut(s) 158
AoxI GGCC 4 cut(s) 274, 522, 582, 1186
ApeKI GCWGC 2 cut(s) 755, 1193
ApoI RAATTY 3 cut(s) 483, 1232, 1921
ArsI GACNNNNNNTTYG 4 cut(s) 621, 653, 1080, 1112
AseI ATTAAT 1 cut(s) 614
Asp700I GAANNNNTTC 2 cut(s) 648, 1059
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 7 cut(s) 274, 563, 1013, 1304, 1381, 1454, 1589
AsuHPI GGTGA 2 cut(s) 724, 1415
AvaII GGWCC 6 cut(s) 563, 1013, 1304, 1381, 1454, 1589
BanI GGYRCC 1 cut(s) 677
BanII GRGCYC 1 cut(s) 1148
BbsI GAAGAC 1 cut(s) 112
BbvI GCAGC 2 cut(s) 742, 1180
BccI CCATC 3 cut(s) 587, 870, 1852
BceAI ACGGC 4 cut(s) 81, 569, 690, 1173
BcgI CGANNNNNNTGC 4 cut(s) 928, 962, 1934, 1968
BciT130I CCWGG 5 cut(s) 47, 79, 159, 575, 1118
BciVI GTATCC 1 cut(s) 461
BclI TGATCA 2 cut(s) 1258, 1398
BcoDI GTCTC 6 cut(s) 643, 821, 1315, 1376, 1434, 1700
BcuI ACTAGT 2 cut(s) 1204, 1513
BfaI CTAG 5 cut(s) 92, 143, 1205, 1388, 1514
BfmI CTRYAG 2 cut(s) 30, 111
BfuI GTATCC 1 cut(s) 461
BisI GCNGC 2 cut(s) 756, 1194
BlsI GCNGC 2 cut(s) 757, 1195
BmcAI AGTACT 1 cut(s) 1203
Bme1390I CCNGG 5 cut(s) 47, 79, 159, 575, 1118
Bme18I GGWCC 6 cut(s) 563, 1013, 1304, 1381, 1454, 1589
BmgT120I GGNCC 7 cut(s) 274, 563, 1013, 1304, 1381, 1454, 1589
BmiI GGNNCC 2 cut(s) 679, 1757
BmrFI CCNGG 5 cut(s) 47, 79, 159, 575, 1118
BmrI ACTGGG 2 cut(s) 218, 1813
BmsI GCATC 3 cut(s) 298, 1113, 1986
BmuI ACTGGG 2 cut(s) 218, 1813
BpiI GAAGAC 1 cut(s) 112
BplI GAGNNNNNCTC 2 cut(s) 1271, 1303
BpmI CTGGAG 2 cut(s) 875, 1320
Bpu10I CCTNAGC 1 cut(s) 1377
BpuEI CTTGAG 1 cut(s) 219
Bsa29I ATCGAT 1 cut(s) 1771
BsaBI GATNNNNATC 1 cut(s) 839
BsaHI GRCGYC 1 cut(s) 537
BsaI GGTCTC 1 cut(s) 643
BsaJI CCNNGG 3 cut(s) 46, 574, 1759
BsaXI ACNNNNNCTCC 8 cut(s) 162, 192, 623, 653, 1293, 1323, 1697, 1727
Bsc4I CCNNNNNNNGG 5 cut(s) 146, 478, 580, 1645, 1858
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 7 cut(s) 224, 858, 1199, 1307, 1426, 1456, 1808
Bse3DI GCAATG 2 cut(s) 323, 1566
Bse8I GATNNNNATC 1 cut(s) 839
BseBI CCWGG 5 cut(s) 47, 79, 159, 575, 1118
BseCI ATCGAT 1 cut(s) 1771
BseDI CCNNGG 3 cut(s) 46, 574, 1759
BseGI GGATG 5 cut(s) 250, 881, 1545, 1804, 1900
BseJI GATNNNNATC 1 cut(s) 839
BseLI CCNNNNNNNGG 5 cut(s) 146, 478, 580, 1645, 1858
BseMI GCAATG 2 cut(s) 323, 1566
BseMII CTCAG 2 cut(s) 838, 1391
BseNI ACTGG 7 cut(s) 224, 858, 1199, 1307, 1426, 1456, 1808
BseRI GAGGAG 1 cut(s) 1718
BseXI GCAGC 2 cut(s) 742, 1180
BseYI CCCAGC 1 cut(s) 1930
BsgI GTGCAG 1 cut(s) 1179
Bsh1236I CGCG 1 cut(s) 1602
BshFI GGCC 4 cut(s) 276, 524, 584, 1188
BshNI GGYRCC 1 cut(s) 677
BshVI ATCGAT 1 cut(s) 1771
BsiSI CCGG 1 cut(s) 147
BslFI GGGAC 2 cut(s) 1193, 2024
BslI CCNNNNNNNGG 5 cut(s) 146, 478, 580, 1645, 1858
BsmAI GTCTC 6 cut(s) 643, 821, 1315, 1376, 1434, 1700
BsmBI CGTCTC 1 cut(s) 1376
BsmFI GGGAC 2 cut(s) 1193, 2024
BsmI GAATGC 2 cut(s) 1065, 1531
BsnI GGCC 4 cut(s) 276, 524, 584, 1188
Bso31I GGTCTC 1 cut(s) 643
Bsp1286I GDGCHC 1 cut(s) 1148
Bsp1407I TGTACA 1 cut(s) 693
Bsp143I GATC 4 cut(s) 998, 1258, 1398, 1768
BspACI CCGC 3 cut(s) 1240, 1587, 1600
BspANI GGCC 4 cut(s) 276, 524, 584, 1188
BspCNI CTCAG 2 cut(s) 837, 1390
BspDI ATCGAT 1 cut(s) 1771
BspFNI CGCG 1 cut(s) 1602
BspLI GGNNCC 2 cut(s) 679, 1757
BspMAI CTGCAG 1 cut(s) 34
BspPI GGATC 1 cut(s) 1006
BspQI GCTCTTC 1 cut(s) 191
BspT107I GGYRCC 1 cut(s) 677
BspTNI GGTCTC 1 cut(s) 643
BsrDI GCAATG 2 cut(s) 323, 1566
BsrFI RCCGGY 1 cut(s) 146
BsrGI TGTACA 1 cut(s) 693
BsrI ACTGG 7 cut(s) 224, 858, 1199, 1307, 1426, 1456, 1808
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 3 cut(s) 46, 574, 1759
BssMI GATC 4 cut(s) 998, 1258, 1398, 1768
BssNAI GTATAC 2 cut(s) 13, 851
BssNI GRCGYC 1 cut(s) 537
BssT1I CCWWGG 1 cut(s) 1759
Bst1107I GTATAC 2 cut(s) 13, 851
Bst2UI CCWGG 5 cut(s) 47, 79, 159, 575, 1118
Bst4CI ACNGT 7 cut(s) 115, 448, 660, 815, 1504, 1657, 1981
Bst6I CTCTTC 2 cut(s) 191, 1695
BstACI GRCGYC 1 cut(s) 537
BstAPI GCANNNNNTGC 1 cut(s) 1071
BstAUI TGTACA 1 cut(s) 693
BstC8I GCNNGC 9 cut(s) 53, 97, 148, 427, 936, 1144, 1529, 1835, 1953
BstDEI CTNAG 2 cut(s) 824, 1377
BstF5I GGATG 5 cut(s) 250, 881, 1545, 1804, 1900
BstFNI CGCG 1 cut(s) 1602
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 4 cut(s) 1001, 1261, 1401, 1771
BstMAI GTCTC 6 cut(s) 643, 821, 1315, 1376, 1434, 1700
BstMBI GATC 4 cut(s) 998, 1258, 1398, 1768
BstMWI GCNNNNNNNGC 3 cut(s) 290, 752, 1071
BstNI CCWGG 5 cut(s) 47, 79, 159, 575, 1118
BstNSI RCATGY 4 cut(s) 55, 1354, 1630, 1951
BstSCI CCNGG 5 cut(s) 45, 77, 157, 573, 1116
BstSFI CTRYAG 2 cut(s) 30, 111
BstUI CGCG 1 cut(s) 1602
BstV1I GCAGC 2 cut(s) 742, 1180
BstV2I GAAGAC 1 cut(s) 112
BstXI CCANNNNNNTGG 2 cut(s) 560, 1184
BstZ17I GTATAC 2 cut(s) 13, 851
Bsu15I ATCGAT 1 cut(s) 1771
BsuI GTATCC 1 cut(s) 461
BsuRI GGCC 4 cut(s) 276, 524, 584, 1188
BsuTUI ATCGAT 1 cut(s) 1771
BtgZI GCGATG 1 cut(s) 953
BtsCI GGATG 5 cut(s) 250, 881, 1545, 1804, 1900
BtsI GCAGTG 3 cut(s) 39, 311, 1152
BtsIMutI CAGTG 7 cut(s) 39, 172, 311, 656, 1152, 1509, 1986
Cac8I GCNNGC 9 cut(s) 53, 97, 148, 427, 936, 1144, 1529, 1835, 1953
CaiI CAGNNNCTG 1 cut(s) 158
CfoI GCGC 1 cut(s) 152
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 7 cut(s) 274, 563, 1013, 1304, 1381, 1454, 1589
ClaI ATCGAT 1 cut(s) 1771
CseI GACGC 1 cut(s) 545
Csp6I GTAC 7 cut(s) 587, 694, 821, 976, 1202, 1391, 1808
CviQI GTAC 7 cut(s) 587, 694, 821, 976, 1202, 1391, 1808
DdeI CTNAG 2 cut(s) 824, 1377
DpnI GATC 4 cut(s) 1000, 1260, 1400, 1770
DpnII GATC 4 cut(s) 998, 1258, 1398, 1768
EaeI YGGCCR 2 cut(s) 582, 1186
Eam1104I CTCTTC 2 cut(s) 191, 1695
EarI CTCTTC 2 cut(s) 191, 1695
EciI GGCGGA 1 cut(s) 1602
Eco130I CCWWGG 1 cut(s) 1759
Eco24I GRGCYC 1 cut(s) 1148
Eco31I GGTCTC 1 cut(s) 643
Eco47I GGWCC 6 cut(s) 563, 1013, 1304, 1381, 1454, 1589
Eco57I CTGAAG 3 cut(s) 109, 249, 713
EcoRII CCWGG 5 cut(s) 45, 77, 157, 573, 1116
EcoT14I CCWWGG 1 cut(s) 1759
EcoT38I GRGCYC 1 cut(s) 1148
ErhI CCWWGG 1 cut(s) 1759
Esp3I CGTCTC 1 cut(s) 1376
FaqI GGGAC 2 cut(s) 1193, 2024
FauNDI CATATG 1 cut(s) 555
FbaI TGATCA 2 cut(s) 1258, 1398
FblI GTMKAC 2 cut(s) 12, 850
Fnu4HI GCNGC 2 cut(s) 756, 1194
FokI GGATG 5 cut(s) 257, 888, 1552, 1811, 1907
FriOI GRGCYC 1 cut(s) 1148
Fsp4HI GCNGC 2 cut(s) 756, 1194
FspBI CTAG 5 cut(s) 92, 143, 1205, 1388, 1514
GlaI GCGC 1 cut(s) 151
GluI GCNGC 2 cut(s) 756, 1194
GsaI CCCAGC 1 cut(s) 1934
GsuI CTGGAG 2 cut(s) 875, 1320
HaeIII GGCC 4 cut(s) 276, 524, 584, 1188
HapII CCGG 1 cut(s) 147
HgaI GACGC 1 cut(s) 545
HhaI GCGC 1 cut(s) 152
Hin1I GRCGYC 1 cut(s) 537
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HincII GTYRAC 1 cut(s) 1438
HindII GTYRAC 1 cut(s) 1438
HindIII AAGCTT 2 cut(s) 890, 1718
HinfI GANTC 6 cut(s) 162, 969, 1439, 1677, 1727, 2039
HpaII CCGG 1 cut(s) 147
HphI GGTGA 2 cut(s) 724, 1415
Hpy166II GTNNAC 8 cut(s) 13, 136, 851, 1016, 1081, 1099, 1168, 1438
Hpy188III TCNNGA 5 cut(s) 190, 1299, 1379, 1663, 1739
Hpy8I GTNNAC 8 cut(s) 13, 136, 851, 1016, 1081, 1099, 1168, 1438
HpyAV CCTTC 2 cut(s) 458, 472
HpyCH4III ACNGT 7 cut(s) 115, 448, 660, 815, 1504, 1657, 1981
HpyCH4IV ACGT 1 cut(s) 339
HpyF10VI GCNNNNNNNGC 3 cut(s) 290, 752, 1071
HpyF3I CTNAG 2 cut(s) 824, 1377
HpySE526I ACGT 1 cut(s) 339
Hsp92I GRCGYC 1 cut(s) 537
HspAI GCGC 1 cut(s) 150
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
Ksp22I TGATCA 2 cut(s) 1258, 1398
Kzo9I GATC 4 cut(s) 998, 1258, 1398, 1768
LguI GCTCTTC 1 cut(s) 191
LmnI GCTCC 2 cut(s) 856, 2024
Lsp1109I GCAGC 2 cut(s) 742, 1180
LweI GCATC 3 cut(s) 298, 1113, 1986
MaeI CTAG 5 cut(s) 92, 143, 1205, 1388, 1514
MaeII ACGT 1 cut(s) 339
MaeIII GTNAC 4 cut(s) 952, 1150, 1631, 2036
MalI GATC 4 cut(s) 1000, 1260, 1400, 1770
MboI GATC 4 cut(s) 998, 1258, 1398, 1768
MboII GAAGA 8 cut(s) 94, 112, 115, 178, 1100, 1549, 1712, 1910
MhlI GDGCHC 1 cut(s) 1148
MlyI GAGTC 3 cut(s) 1433, 1736, 2033
MmeI TCCRAC 2 cut(s) 976, 1157
MroNI GCCGGC 1 cut(s) 146
MroXI GAANNNNTTC 2 cut(s) 648, 1059
MseI TTAA 7 cut(s) 326, 450, 614, 1236, 1476, 1746, 2053
MslI CAYNNNNRTG 6 cut(s) 316, 545, 689, 833, 1627, 1793
MspI CCGG 1 cut(s) 147
MspR9I CCNGG 5 cut(s) 47, 79, 159, 575, 1118
Mva1269I GAATGC 2 cut(s) 1065, 1531
MvaI CCWGG 5 cut(s) 47, 79, 159, 575, 1118
MvnI CGCG 1 cut(s) 1602
MwoI GCNNNNNNNGC 3 cut(s) 290, 752, 1071
NaeI GCCGGC 1 cut(s) 148
NdeI CATATG 1 cut(s) 555
NdeII GATC 4 cut(s) 998, 1258, 1398, 1768
NgoMIV GCCGGC 1 cut(s) 146
NlaIV GGNNCC 2 cut(s) 679, 1757
NmuCI GTSAC 3 cut(s) 1150, 1631, 2036
NspI RCATGY 4 cut(s) 55, 1354, 1630, 1951
OliI CACNNNNGTG 1 cut(s) 1627
PaeI GCATGC 1 cut(s) 55
PciSI GCTCTTC 1 cut(s) 191
PctI GAATGC 2 cut(s) 1065, 1531
PdiI GCCGGC 1 cut(s) 148
PdmI GAANNNNTTC 2 cut(s) 648, 1059
PfeI GAWTC 3 cut(s) 162, 969, 1677
PfoI TCCNGGA 3 cut(s) 77, 157, 1116
PkrI GCNGC 2 cut(s) 757, 1195
PleI GAGTC 3 cut(s) 1433, 1735, 2033
PpsI GAGTC 3 cut(s) 1433, 1735, 2033
PshBI ATTAAT 1 cut(s) 614
PsiI TTATAA 1 cut(s) 870
Psp1406I AACGTT 1 cut(s) 339
Psp6I CCWGG 5 cut(s) 45, 77, 157, 573, 1116
PspFI CCCAGC 1 cut(s) 1930
PspGI CCWGG 5 cut(s) 45, 77, 157, 573, 1116
PspN4I GGNNCC 2 cut(s) 679, 1757
PspPI GGNCC 7 cut(s) 274, 563, 1013, 1304, 1381, 1454, 1589
PstI CTGCAG 1 cut(s) 34
PstNI CAGNNNCTG 1 cut(s) 158
RsaI GTAC 7 cut(s) 588, 695, 822, 977, 1203, 1392, 1809
RsaNI GTAC 7 cut(s) 587, 694, 821, 976, 1202, 1391, 1808
RseI CAYNNNNRTG 6 cut(s) 316, 545, 689, 833, 1627, 1793
SapI GCTCTTC 1 cut(s) 191
SaqAI TTAA 7 cut(s) 326, 450, 614, 1236, 1476, 1746, 2053
SatI GCNGC 2 cut(s) 756, 1194
Sau3AI GATC 4 cut(s) 998, 1258, 1398, 1768
Sau96I GGNCC 7 cut(s) 274, 563, 1013, 1304, 1381, 1454, 1589
ScaI AGTACT 1 cut(s) 1203
SchI GAGTC 3 cut(s) 1433, 1736, 2033
ScrFI CCNGG 5 cut(s) 47, 79, 159, 575, 1118
SduI GDGCHC 1 cut(s) 1148
SfaNI GCATC 3 cut(s) 298, 1113, 1986
SfcI CTRYAG 2 cut(s) 30, 111
SinI GGWCC 6 cut(s) 563, 1013, 1304, 1381, 1454, 1589
SmiMI CAYNNNNRTG 6 cut(s) 316, 545, 689, 833, 1627, 1793
SmlI CTYRAG 1 cut(s) 234
SmoI CTYRAG 1 cut(s) 234
SpeI ACTAGT 2 cut(s) 1204, 1513
SphI GCATGC 1 cut(s) 55
SsiI CCGC 3 cut(s) 1240, 1587, 1600
SspMI CTAG 5 cut(s) 92, 143, 1205, 1388, 1514
StyD4I CCNGG 5 cut(s) 45, 77, 157, 573, 1116
StyI CCWWGG 1 cut(s) 1759
TaaI ACNGT 7 cut(s) 115, 448, 660, 815, 1504, 1657, 1981
TaiI ACGT 1 cut(s) 342
TaqI TCGA 3 cut(s) 1550, 1771, 1791
TaqII GACCGA 1 cut(s) 641
TatI WGTACW 2 cut(s) 693, 1201
TfiI GAWTC 3 cut(s) 162, 969, 1677
Tru1I TTAA 7 cut(s) 326, 450, 614, 1236, 1476, 1746, 2053
Tru9I TTAA 7 cut(s) 326, 450, 614, 1236, 1476, 1746, 2053
TscAI CASTG 7 cut(s) 39, 172, 318, 663, 1159, 1509, 1986
TseFI GTSAC 3 cut(s) 1150, 1631, 2036
TseI GCWGC 2 cut(s) 755, 1193
Tsp45I GTSAC 3 cut(s) 1150, 1631, 2036
TspDTI ATGAA 9 cut(s) 261, 508, 851, 902, 915, 1431, 1570, 1911, 1947
TspGWI ACGGA 2 cut(s) 1358, 1768
TspRI CASTG 7 cut(s) 39, 172, 318, 663, 1159, 1509, 1986
VpaK11BI GGWCC 6 cut(s) 563, 1013, 1304, 1381, 1454, 1589
VspI ATTAAT 1 cut(s) 614
XapI RAATTY 3 cut(s) 483, 1232, 1921
XceI RCATGY 4 cut(s) 55, 1354, 1630, 1951
XmiI GTMKAC 2 cut(s) 12, 850
XmnI GAANNNNTTC 2 cut(s) 648, 1059
XspI CTAG 5 cut(s) 92, 143, 1205, 1388, 1514
ZrmI AGTACT 1 cut(s) 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.