Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0011053

Physical Location & Seq

Genomic Coordinates Forward (+)

54361834 .. 54364812

Gene Structure 2979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0447900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGCAATCAGGGTTCAATTCCGGCAATCAGGGTCTGCCGGATTTTTACGCCGGAGGAGGGAGATCGATCGGCAGCACCATGAGCAACCACCCTTCACAGCCTCAGTACCAACGATCCCAGCTTCCGGGGCTGTTCATGGACCCCACTGGTCCTCAGATCGGTCGCCAAACGCAGAATCTGCACCACAATACAGCCGGGCTCATCGGAAAAAGGTCTCTGGCCGAGTATCAATATCAACAGCACCAAAACCCCTACCAGCAGAATCTGACTAACCAGCAAAATATCTATCTGCGGTCGCTCAAGCCCAAAACTACAGCCAATTATCAGCACTCAAATTTCCAACACGCCTCCCCAATCTCGCCTCTGTCACCAATTGACTTTTCATCTGCCTCGTCATATACAGGTTCGGAGAATTCCAACACTTCTTCCACAACATCCTCCATGTTTTCGCAGCGATATAGGTTGCCCCTTCTTCAACAGCTCCGGCCGCAACCGGTAATTAACCCGATGTTTCAGGCATCCTCATCGCCTTACGTCAACCATAACAACACTGTGCAGCCTCTTCAGAATCAGATTGTTCAGAACCGGGTTCCGGTTTCGGCGATCGAGTCTGAGAAGAAGATGAATAACCCGGTTTCGTCTGTTGATTCTGAGAAGAAGATGATTGACCACAGGCTACAGGAATTGGAGAAGCAGCTCCTCGATGATAACGATGAGGAGGAGGAAGGAGGCGACGCCGTTTCGGTTATTACTAAGACCAACAGCGAGTGGTCCGAGACGATACAGAATCTGATCGGTCCGAATCAGACGACCCAGAAGCCGGTCTCGCCGTCGCCCACTTCGTCGTCGTCTTCATCCTCCTCGGTGGCGTCTCCGGCGACTCTGACGTGTTCAAAGCAGTCGCTGATGGAGGCCGCATCGGCCATTTCAGAAGGGAAATCCGAGGCCGCGGCTGAGATCCTCACGCGCCTGGCCCAGGTCACGAACCCGAGACCCAATTCGGAGCAGAGGCTGCTTGAGTTCATGGCTTCGGCGTTGAAGTCGCGGGTCAACCCGGTGGATAATCCGCCGCAGGTGTCGGAGCTTTTTACCCAGGAACACGCCGGGTCGACCCAGTGTCTCTACGAGCTCATACCTTGCTTCCGCCTCGGTTTCATAGCCGCTAACCTGGCAATTCTGGAAGCCACATTAGCGGACCAGTCGACGACCAATAAGGTCCATGTGATTGACTTCGATATTGGGCAGGGCTTTCAGTACAGGCACCTCCTGCACGAGCTCTCCACGCGCCCGAATGGGAAATCCTCCGTCGTCAAAATCACCACCGTTCCTGATAATGGCGGCGAGGACAGGTTGAGGTCAGTCCGTCAGAATCTGAGCCAAATGGCGAAGAAATTGGGTGTGGGTCTTGAATTCAACGTTGTGAGTCAGAAGCTGAGCGAGCTGAACCGGGAATCGCTGGGATGCGAACCGGACGAGCCGATCGCCGTGAACTTCGCTTTCAAATTGTACAGCATGCCGGACGAGAGCGTCTCCACGGACAACCCCCGAGACGAGCTCCTGCGGCGCGTGAAGGGACTCGCCCCGCGCGTGGTAACGCTGGTCGAACAAGAGCTCAACACCAACACCGCTCCATTCATGGCGCGCGTGAACGAGTCGTGCGCGTATTACGGGGCCCTGATGGACTCGGTCGAGGCGGTGGCGAATGACCACCAGGACCGAGTCAAAGCGGAGGAGGCGCTGAGTCGCAAGCTCGCGAACTCGGTCGCTTGCGAAGGGAGGGACCGCGTTGAAAGATGTGAAGTGTTTGGGAAGTGGCGGGCCCGCATGGGAATGGCTGGGTTCGAGTTAAGGAGAATGAGCCAAAGCATGACCGAGTCGTTAGGCCATCGACTCTGTTCGGGCAACCGAGTCCACCCGGGCTTCACCGTCAAAGAAGAAAACGGAGCCGTTTGCTTCGGTTGGAAAAGCCGCACTCTCACTGTCGCATCAGCTTGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

666

Amino Acids

73.57

Weight (kDa)

6.59

Isoelectric Point (pI)

51.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	299 - 666	1.5e-104	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76320 AT1G76320 AT1G76320 AT1G76320
fragaria_vesca	FvH4_7g34132
malus_domestica	MD01G1237500.v1.1 MD07G1310000.v1.1
prunus_persica	Prupe.2G327900_v2.0.a1
pyrus_communis	pycom01g24520
rosa_chinensis	RchiOBHm_Chr1g0384461
rosa_multiflora	Rmu_co8407315.1_g000001
rosa_roxburghii	Rroxscaffold_4G00276680
rosa_rugosa	Rorug01G0447900 Rorug01G0448000 Rorug05G0131300
rosa_samantha	Rh1AG473200 Rh1BG431200 Rh1CG444400
rosa_wichuraiana	Rw1G039940 Rw4G020470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1063
AasI	GACNNNNNNGTC	1 cut(s)	1526
Acc36I	ACCTGC	1 cut(s)	1063
AccB1I	GGYRCC	1 cut(s)	1260
AccBSI	CCGCTC	1 cut(s)	1628
AccI	GTMKAC	2 cut(s)	1109, 1202
AclI	AACGTT	1 cut(s)	1416
AclWI	GGATC	2 cut(s)	108, 952
AcoI	YGGCCR	3 cut(s)	219, 485, 921
AcsI	RAATTY	3 cut(s)	334, 412, 1409
AcuI	CTGAAG	1 cut(s)	548
AcyI	GRCGYC	2 cut(s)	735, 869
AfaI	GTAC	3 cut(s)	107, 1256, 1508
AfiI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 820, 976, 1334, 1588
AflIII	ACRYGT	1 cut(s)	887
AgeI	ACCGGT	1 cut(s)	493
AgsI	TTSAA	8 cut(s)	16, 476, 894, 1039, 1409, 1414, 1501, 1790
AhdI	GACNNNNNGTC	1 cut(s)	1116
AjiI	CACGTC	1 cut(s)	888
AjnI	CCWGG	5 cut(s)	969, 975, 1092, 1167, 1710
AjuI	GAANNNNNNNTTGG	2 cut(s)	364, 396
Alw21I	GWGCWC	4 cut(s)	1131, 1278, 1557, 1614
Alw26I	GTCTC	8 cut(s)	219, 770, 829, 876, 985, 1124, 1534, 1542
AlwI	GGATC	2 cut(s)	108, 952
AlwNI	CAGNNNCTG	8 cut(s)	34, 178, 265, 790, 904, 1012, 1372, 1432
Ama87I	CYCGRG	3 cut(s)	988, 1545, 1915
AoxI	GGCC	9 cut(s)	219, 485, 912, 921, 945, 972, 1671, 1818, 1882
ApaI	GGGCCC	2 cut(s)	1675, 1822
ApeKI	GCWGC	5 cut(s)	72, 451, 556, 694, 1012
ApoI	RAATTY	3 cut(s)	334, 412, 1409
AsiGI	ACCGGT	1 cut(s)	493
AspLEI	GCGC	8 cut(s)	969, 1287, 1566, 1587, 1642, 1644, 1661, 1738
AsuC2I	CCSGG	9 cut(s)	126, 196, 587, 632, 1055, 1105, 1448, 1916, 1917
AsuHPI	GGTGA	3 cut(s)	360, 1309, 1915
AvaI	CYCGRG	3 cut(s)	988, 1545, 1915
AvaII	GGWCC	8 cut(s)	139, 149, 771, 797, 1195, 1216, 1714, 1780
BaeGI	GKGCMC	2 cut(s)	1675, 1822
BanI	GGYRCC	1 cut(s)	1260
BanII	GRGCYC	7 cut(s)	201, 1131, 1278, 1557, 1614, 1675, 1822
BauI	CACGAG	1 cut(s)	1271
BbsI	GAAGAC	1 cut(s)	843
Bbv12I	GWGCWC	4 cut(s)	1131, 1278, 1557, 1614
BbvI	GCAGC	5 cut(s)	84, 463, 568, 706, 999
BccI	CCATC	3 cut(s)	901, 1672, 1893
BceAI	ACGGC	4 cut(s)	722, 814, 1469, 1931
BcgI	CGANNNNNNTGC	2 cut(s)	507, 541
BciT130I	CCWGG	5 cut(s)	971, 977, 1094, 1169, 1712
BcnI	CCSGG	9 cut(s)	126, 196, 587, 632, 1055, 1105, 1448, 1916, 1917
BcoDI	GTCTC	8 cut(s)	219, 770, 829, 876, 985, 1124, 1534, 1542
BfmI	CTRYAG	2 cut(s)	312, 677
BfoI	RGCGCY	1 cut(s)	1739
BfuAI	ACCTGC	1 cut(s)	1063
BglI	GCCNNNNNGGC	1 cut(s)	920
BlpI	GCTNAGC	1 cut(s)	1433
Bme18I	GGWCC	8 cut(s)	139, 149, 771, 797, 1195, 1216, 1714, 1780
BmeRI	GACNNNNNGTC	1 cut(s)	1116
BmeT110I	CYCGRG	3 cut(s)	988, 1545, 1915
BmgBI	CACGTC	1 cut(s)	888
BmiI	GGNNCC	8 cut(s)	141, 591, 1262, 1672, 1673, 1781, 1820, 1945
BmrI	ACTGGG	1 cut(s)	1108
BmsI	GCATC	4 cut(s)	527, 926, 1451, 1994
BmuI	ACTGGG	1 cut(s)	1108
BpiI	GAAGAC	1 cut(s)	843
BplI	GAGNNNNNCTC	4 cut(s)	1514, 1546, 1539, 1571
Bpu1102I	GCTNAGC	1 cut(s)	1433
BpuEI	CTTGAG	2 cut(s)	284, 1037
BpuMI	CCSGG	9 cut(s)	126, 196, 587, 632, 1055, 1105, 1448, 1916, 1917
Bsa29I	ATCGAT	1 cut(s)	65
BsaHI	GRCGYC	2 cut(s)	735, 869
BsaI	GGTCTC	3 cut(s)	219, 829, 985
BsaJI	CCNNGG	9 cut(s)	125, 861, 942, 948, 975, 1092, 1147, 1533, 1915
BsaWI	WCCGGW	3 cut(s)	493, 592, 1468
BsaXI	ACNNNNNCTCC	2 cut(s)	1262, 1292
Bsc4I	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 820, 976, 1334, 1588
Bse118I	RCCGGY	2 cut(s)	493, 820
Bse1I	ACTGG	3 cut(s)	151, 1114, 1198
BseBI	CCWGG	5 cut(s)	971, 977, 1094, 1169, 1712
BseCI	ATCGAT	1 cut(s)	65
BseDI	CCNNGG	9 cut(s)	125, 861, 942, 948, 975, 1092, 1147, 1533, 1915
BseGI	GGATG	4 cut(s)	434, 518, 854, 1466
BseLI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 820, 976, 1334, 1588
BseMII	CTCAG	8 cut(s)	116, 167, 603, 642, 945, 1364, 1424, 1730
BseNI	ACTGG	3 cut(s)	151, 1114, 1198
BsePI	GCGCGC	1 cut(s)	1640
BseRI	GAGGAG	6 cut(s)	69, 689, 731, 734, 850, 1745
BseSI	GKGCMC	2 cut(s)	1675, 1822
BseX3I	CGGCCG	1 cut(s)	485
BseXI	GCAGC	5 cut(s)	84, 463, 568, 706, 999
BseYI	CCCAGC	3 cut(s)	117, 1456, 1835
BsgI	GTGCAG	3 cut(s)	164, 575, 1253
Bsh1285I	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1482, 1689, 1764
BshFI	GGCC	9 cut(s)	221, 487, 914, 923, 947, 974, 1673, 1820, 1884
BshNI	GGYRCC	1 cut(s)	1260
BshTI	ACCGGT	1 cut(s)	493
BshVI	ATCGAT	1 cut(s)	65
BsiEI	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1482, 1689, 1764
BsiHKAI	GWGCWC	4 cut(s)	1131, 1278, 1557, 1614
BsiHKCI	CYCGRG	3 cut(s)	988, 1545, 1915
BslFI	GGGAC	2 cut(s)	1587, 1793
BslI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 820, 976, 1334, 1588
BsmAI	GTCTC	8 cut(s)	219, 770, 829, 876, 985, 1124, 1534, 1542
BsmBI	CGTCTC	4 cut(s)	770, 876, 1534, 1542
BsmFI	GGGAC	2 cut(s)	1587, 1793
BsnI	GGCC	9 cut(s)	221, 487, 914, 923, 947, 974, 1673, 1820, 1884
Bso31I	GGTCTC	3 cut(s)	219, 829, 985
BsoBI	CYCGRG	3 cut(s)	988, 1545, 1915
Bsp120I	GGGCCC	2 cut(s)	1671, 1818
Bsp1286I	GDGCHC	7 cut(s)	201, 1131, 1278, 1557, 1614, 1675, 1822
Bsp1407I	TGTACA	1 cut(s)	1506
Bsp143I	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
Bsp1720I	GCTNAGC	1 cut(s)	1433
Bsp68I	TCGCGA	1 cut(s)	1754
BspANI	GGCC	9 cut(s)	221, 487, 914, 923, 947, 974, 1673, 1820, 1884
BspCNI	CTCAG	8 cut(s)	115, 166, 604, 643, 946, 1365, 1425, 1731
BspDI	ATCGAT	1 cut(s)	65
BspLI	GGNNCC	8 cut(s)	141, 591, 1262, 1672, 1673, 1781, 1820, 1945
BspMI	ACCTGC	1 cut(s)	1063
BspPI	GGATC	2 cut(s)	108, 952
BspT107I	GGYRCC	1 cut(s)	1260
BspTNI	GGTCTC	3 cut(s)	219, 829, 985
BsrBI	CCGCTC	1 cut(s)	1628
BsrFI	RCCGGY	2 cut(s)	493, 820
BsrGI	TGTACA	1 cut(s)	1506
BsrI	ACTGG	3 cut(s)	151, 1114, 1198
BssAI	RCCGGY	2 cut(s)	493, 820
BssECI	CCNNGG	9 cut(s)	125, 861, 942, 948, 975, 1092, 1147, 1533, 1915
BssHII	GCGCGC	1 cut(s)	1640
BssMI	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
BssNI	GRCGYC	2 cut(s)	735, 869
BssSI	CACGAG	1 cut(s)	1271
Bst2BI	CACGAG	1 cut(s)	1271
Bst2UI	CCWGG	5 cut(s)	971, 977, 1094, 1169, 1712
Bst4CI	ACNGT	4 cut(s)	553, 1324, 1927, 1981
Bst6I	CTCTTC	1 cut(s)	567
BstACI	GRCGYC	2 cut(s)	735, 869
BstAPI	GCANNNNNTGC	3 cut(s)	178, 1012, 1267
BstAUI	TGTACA	1 cut(s)	1506
BstC8I	GCNNGC	8 cut(s)	1439, 1514, 1642, 1748, 1752, 1768, 1818, 1822
BstDEI	CTNAG	9 cut(s)	102, 153, 612, 651, 753, 954, 1373, 1433, 1739
BstDSI	CCRYGG	2 cut(s)	948, 1533
BstENI	CCTNNNNNAGG	1 cut(s)	974
BstF5I	GGATG	4 cut(s)	434, 518, 854, 1466
BstH2I	RGCGCY	1 cut(s)	1739
BstHHI	GCGC	8 cut(s)	969, 1287, 1566, 1587, 1642, 1644, 1661, 1738
BstKTI	GATC	8 cut(s)	65, 69, 116, 159, 606, 795, 960, 1482
BstMAI	GTCTC	8 cut(s)	219, 770, 829, 876, 985, 1124, 1534, 1542
BstMBI	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
BstMCI	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1482, 1689, 1764
BstNI	CCWGG	5 cut(s)	971, 977, 1094, 1169, 1712
BstNSI	RCATGY	1 cut(s)	1516
BstSFI	CTRYAG	2 cut(s)	312, 677
BstSLI	GKGCMC	2 cut(s)	1675, 1822
BstV1I	GCAGC	5 cut(s)	84, 463, 568, 706, 999
BstV2I	GAAGAC	1 cut(s)	843
BstX2I	RGATCY	1 cut(s)	957
BstYI	RGATCY	1 cut(s)	957
BstZI	CGGCCG	1 cut(s)	485
Bsu15I	ATCGAT	1 cut(s)	65
BsuRI	GGCC	9 cut(s)	221, 487, 914, 923, 947, 974, 1673, 1820, 1884
BsuTUI	ATCGAT	1 cut(s)	65
BtgI	CCRYGG	2 cut(s)	948, 1533
BtgZI	GCGATG	1 cut(s)	510
BtrI	CACGTC	1 cut(s)	888
BtsCI	GGATG	4 cut(s)	434, 518, 854, 1466
BtsIMutI	CAGTG	4 cut(s)	144, 549, 1121, 1977
BtuMI	TCGCGA	1 cut(s)	1754
BveI	ACCTGC	1 cut(s)	1063
Cac8I	GCNNGC	8 cut(s)	1439, 1514, 1642, 1748, 1752, 1768, 1818, 1822
CaiI	CAGNNNCTG	8 cut(s)	34, 178, 265, 790, 904, 1012, 1372, 1432
CfoI	GCGC	8 cut(s)	969, 1287, 1566, 1587, 1642, 1644, 1661, 1738
Cfr10I	RCCGGY	2 cut(s)	493, 820
Cfr42I	CCGCGG	1 cut(s)	951
Cfr9I	CCCGGG	1 cut(s)	1915
ClaI	ATCGAT	1 cut(s)	65
CpoI	CGGWCCG	1 cut(s)	797
CseI	GACGC	3 cut(s)	743, 858, 1516
Csp6I	GTAC	3 cut(s)	106, 1255, 1507
CspAI	ACCGGT	1 cut(s)	493
CspI	CGGWCCG	1 cut(s)	797
CviAII	CATG	9 cut(s)	79, 136, 442, 1024, 1220, 1513, 1636, 1825, 1867
CviQI	GTAC	3 cut(s)	106, 1255, 1507
DdeI	CTNAG	9 cut(s)	102, 153, 612, 651, 753, 954, 1373, 1433, 1739
DpnI	GATC	8 cut(s)	64, 68, 115, 158, 605, 794, 959, 1481
DpnII	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
DrdI	GACNNNNNNGTC	1 cut(s)	1526
DriI	GACNNNNNGTC	1 cut(s)	1116
DseDI	GACNNNNNNGTC	1 cut(s)	1526
EaeI	YGGCCR	3 cut(s)	219, 485, 921
EagI	CGGCCG	1 cut(s)	485
Eam1104I	CTCTTC	1 cut(s)	567
Eam1105I	GACNNNNNGTC	1 cut(s)	1116
EarI	CTCTTC	1 cut(s)	567
EciI	GGCGGA	2 cut(s)	1056, 1133
Ecl136II	GAGCTC	4 cut(s)	1129, 1276, 1555, 1612
EclXI	CGGCCG	1 cut(s)	485
Eco24I	GRGCYC	7 cut(s)	201, 1131, 1278, 1557, 1614, 1675, 1822
Eco31I	GGTCTC	3 cut(s)	219, 829, 985
Eco47I	GGWCC	8 cut(s)	139, 149, 771, 797, 1195, 1216, 1714, 1780
Eco52I	CGGCCG	1 cut(s)	485
Eco53kI	GAGCTC	4 cut(s)	1129, 1276, 1555, 1612
Eco57I	CTGAAG	1 cut(s)	548
Eco88I	CYCGRG	3 cut(s)	988, 1545, 1915
EcoICRI	GAGCTC	4 cut(s)	1129, 1276, 1555, 1612
EcoNI	CCTNNNNNAGG	1 cut(s)	974
EcoO109I	RGGNCCY	2 cut(s)	1671, 1672
EcoRI	GAATTC	2 cut(s)	412, 1409
EcoRII	CCWGG	5 cut(s)	969, 975, 1092, 1167, 1710
EcoT38I	GRGCYC	7 cut(s)	201, 1131, 1278, 1557, 1614, 1675, 1822
Esp3I	CGTCTC	4 cut(s)	770, 876, 1534, 1542
FaeI	CATG	9 cut(s)	82, 139, 445, 1027, 1223, 1516, 1639, 1828, 1870
FaqI	GGGAC	2 cut(s)	1587, 1793
FatI	CATG	9 cut(s)	78, 135, 441, 1023, 1219, 1512, 1635, 1824, 1866
FauI	CCCGC	4 cut(s)	1038, 1590, 1809, 1829
FblI	GTMKAC	2 cut(s)	1109, 1202
FokI	GGATG	4 cut(s)	421, 505, 841, 1473
FriOI	GRGCYC	7 cut(s)	201, 1131, 1278, 1557, 1614, 1675, 1822
GlaI	GCGC	8 cut(s)	968, 1286, 1565, 1586, 1641, 1643, 1660, 1737
GsaI	CCCAGC	3 cut(s)	121, 1460, 1839
HaeII	RGCGCY	1 cut(s)	1739
HaeIII	GGCC	9 cut(s)	221, 487, 914, 923, 947, 974, 1673, 1820, 1884
HgaI	GACGC	3 cut(s)	743, 858, 1516
HhaI	GCGC	8 cut(s)	969, 1287, 1566, 1587, 1642, 1644, 1661, 1738
Hin1I	GRCGYC	2 cut(s)	735, 869
Hin1II	CATG	9 cut(s)	82, 139, 445, 1027, 1223, 1516, 1639, 1828, 1870
Hin6I	GCGC	8 cut(s)	967, 1285, 1564, 1585, 1640, 1642, 1659, 1736
HinP1I	GCGC	8 cut(s)	967, 1285, 1564, 1585, 1640, 1642, 1659, 1736
HincII	GTYRAC	4 cut(s)	538, 1051, 1110, 1203
HindII	GTYRAC	4 cut(s)	538, 1051, 1110, 1203
HphI	GGTGA	3 cut(s)	360, 1309, 1915
Hpy166II	GTNNAC	7 cut(s)	538, 1051, 1110, 1203, 1489, 1648, 1912
Hpy188III	TCNNGA	5 cut(s)	982, 1178, 1328, 1406, 1753
Hpy8I	GTNNAC	7 cut(s)	538, 1051, 1110, 1203, 1489, 1648, 1912
Hpy99I	CGWCG	6 cut(s)	737, 835, 847, 850, 1207, 1310
HpyAV	CCTTC	6 cut(s)	102, 479, 719, 926, 1564, 1766
HpyCH4III	ACNGT	4 cut(s)	553, 1324, 1927, 1981
HpyCH4IV	ACGT	3 cut(s)	534, 887, 1416
HpyCH4V	TGCA	4 cut(s)	4, 181, 556, 1270
HpyF3I	CTNAG	9 cut(s)	102, 153, 612, 651, 753, 954, 1373, 1433, 1739
HpySE526I	ACGT	3 cut(s)	534, 887, 1416
Hsp92I	GRCGYC	2 cut(s)	735, 869
Hsp92II	CATG	9 cut(s)	82, 139, 445, 1027, 1223, 1516, 1639, 1828, 1870
HspAI	GCGC	8 cut(s)	967, 1285, 1564, 1585, 1640, 1642, 1659, 1736
KspI	CCGCGG	1 cut(s)	951
Kzo9I	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
LmnI	GCTCC	7 cut(s)	486, 702, 1003, 1081, 1560, 1633, 1943
Lsp1109I	GCAGC	5 cut(s)	84, 463, 568, 706, 999
LweI	GCATC	4 cut(s)	527, 926, 1451, 1994
MaeII	ACGT	3 cut(s)	534, 887, 1416
MaeIII	GTNAC	3 cut(s)	366, 979, 1591
MalI	GATC	8 cut(s)	64, 68, 115, 158, 605, 794, 959, 1481
MbiI	CCGCTC	1 cut(s)	1628
MboI	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	1 cut(s)	957
MhlI	GDGCHC	7 cut(s)	201, 1131, 1278, 1557, 1614, 1675, 1822
MmeI	TCCRAC	4 cut(s)	364, 441, 1059, 1940
MseI	TTAA	3 cut(s)	501, 1847, 1999
MslI	CAYNNNNRTG	1 cut(s)	1829
MspA1I	CMGCKG	1 cut(s)	950
MunI	CAATTG	1 cut(s)	372
MvaI	CCWGG	5 cut(s)	971, 977, 1094, 1169, 1712
NciI	CCSGG	9 cut(s)	126, 196, 587, 632, 1055, 1105, 1448, 1916, 1917
NdeII	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
NlaIII	CATG	9 cut(s)	82, 139, 445, 1027, 1223, 1516, 1639, 1828, 1870
NlaIV	GGNNCC	8 cut(s)	141, 591, 1262, 1672, 1673, 1781, 1820, 1945
NmeAIII	GCCGAG	1 cut(s)	247
NmuCI	GTSAC	2 cut(s)	366, 979
NruI	TCGCGA	1 cut(s)	1754
NspI	RCATGY	1 cut(s)	1516
PaeI	GCATGC	1 cut(s)	1516
PaqCI	CACCTGC	1 cut(s)	1063
PauI	GCGCGC	1 cut(s)	1640
PcsI	WCGNNNNNNNCGW	3 cut(s)	708, 839, 1584
PfeI	GAWTC	8 cut(s)	175, 262, 568, 647, 787, 802, 1369, 1451
PflFI	GACNNNGTC	3 cut(s)	1685, 1718, 1873
PinAI	ACCGGT	1 cut(s)	493
Ple19I	CGATCG	3 cut(s)	69, 606, 1482
Psp124BI	GAGCTC	4 cut(s)	1131, 1278, 1557, 1614
Psp1406I	AACGTT	1 cut(s)	1416
Psp6I	CCWGG	5 cut(s)	969, 975, 1092, 1167, 1710
PspFI	CCCAGC	3 cut(s)	117, 1456, 1835
PspGI	CCWGG	5 cut(s)	969, 975, 1092, 1167, 1710
PspN4I	GGNNCC	8 cut(s)	141, 591, 1262, 1672, 1673, 1781, 1820, 1945
PspOMI	GGGCCC	2 cut(s)	1671, 1818
PstNI	CAGNNNCTG	8 cut(s)	34, 178, 265, 790, 904, 1012, 1372, 1432
PsuI	RGATCY	1 cut(s)	957
PsyI	GACNNNGTC	3 cut(s)	1685, 1718, 1873
PteI	GCGCGC	1 cut(s)	1640
PvuI	CGATCG	3 cut(s)	69, 606, 1482
RruI	TCGCGA	1 cut(s)	1754
RsaI	GTAC	3 cut(s)	107, 1256, 1508
RsaNI	GTAC	3 cut(s)	106, 1255, 1507
RseI	CAYNNNNRTG	1 cut(s)	1829
Rsr2I	CGGWCCG	1 cut(s)	797
RsrII	CGGWCCG	1 cut(s)	797
SacI	GAGCTC	4 cut(s)	1131, 1278, 1557, 1614
SacII	CCGCGG	1 cut(s)	951
SalI	GTCGAC	2 cut(s)	1108, 1201
SaqAI	TTAA	3 cut(s)	501, 1847, 1999
Sau3AI	GATC	8 cut(s)	62, 66, 113, 156, 603, 792, 957, 1479
SduI	GDGCHC	7 cut(s)	201, 1131, 1278, 1557, 1614, 1675, 1822
SfaNI	GCATC	4 cut(s)	527, 926, 1451, 1994
SfcI	CTRYAG	2 cut(s)	312, 677
SfiI	GGCCNNNNNGGCC	1 cut(s)	920
Sfr303I	CCGCGG	1 cut(s)	951
SgrBI	CCGCGG	1 cut(s)	951
SinI	GGWCC	8 cut(s)	139, 149, 771, 797, 1195, 1216, 1714, 1780
SmaI	CCCGGG	1 cut(s)	1917
SmiMI	CAYNNNNRTG	1 cut(s)	1829
SmlI	CTYRAG	2 cut(s)	299, 1016
SmoI	CTYRAG	2 cut(s)	299, 1016
SphI	GCATGC	1 cut(s)	1516
SstI	GAGCTC	4 cut(s)	1131, 1278, 1557, 1614
TaaI	ACNGT	4 cut(s)	553, 1324, 1927, 1981
TaiI	ACGT	3 cut(s)	537, 890, 1419
TaqII	GACCGA	6 cut(s)	149, 785, 1675, 1731, 1750, 1886
TatI	WGTACW	2 cut(s)	1254, 1506
TauI	GCSGC	9 cut(s)	490, 917, 950, 953, 1072, 1163, 1341, 1564, 1971
TfiI	GAWTC	8 cut(s)	175, 262, 568, 647, 787, 802, 1369, 1451
Tru1I	TTAA	3 cut(s)	501, 1847, 1999
Tru9I	TTAA	3 cut(s)	501, 1847, 1999
TscAI	CASTG	4 cut(s)	151, 556, 1121, 1984
TseFI	GTSAC	2 cut(s)	366, 979
TseI	GCWGC	5 cut(s)	72, 451, 556, 694, 1012
Tsp45I	GTSAC	2 cut(s)	366, 979
TspDTI	ATGAA	7 cut(s)	124, 372, 638, 843, 1012, 1144, 1624
TspGWI	ACGGA	4 cut(s)	1294, 1352, 1550, 1956
TspMI	CCCGGG	1 cut(s)	1915
TspRI	CASTG	4 cut(s)	151, 556, 1121, 1984
Tth111I	GACNNNGTC	3 cut(s)	1685, 1718, 1873
VpaK11BI	GGWCC	8 cut(s)	139, 149, 771, 797, 1195, 1216, 1714, 1780
XagI	CCTNNNNNAGG	1 cut(s)	974
XapI	RAATTY	3 cut(s)	334, 412, 1409
XceI	RCATGY	1 cut(s)	1516
XmaI	CCCGGG	1 cut(s)	1915
XmiI	GTMKAC	2 cut(s)	1109, 1202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.