Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006067

Physical Location & Seq

Genomic Coordinates Forward (+)

2690096 .. 2691819

Gene Structure 1724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0033900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGATTCAAAAAACCGTTAGAACCAACGATCTCATTCTCCTCTGCCAAAAATGCAAAACCCTAAACCAACTCAAGCAAATCCACGCCCACCTCCTCACTTCCACCCGACCCAAAAACCCCTACGCCATCGCGCCGCTCCTCTCCGCCGCCGCCAAAGACGCTTCCTTGTTCTCCTACGCTTGCTCAATCTTCAAACACCACCATCCCCACCGCAACACTTTCATGTACAACACCATGATCAGAGCGCACGCGCAATCACACGCGCCGGTGGCTGCGGTCATGTGCTATCTAGACTTGTTGAGTTACGGATTGATCGCTAATAAGTTTACTTTCCCGCCATTGATCAAGGCTTGCTCGATTTTGGTCCATAATTCTGAGCTAACCGGAAGGTTGGTTCATGCCCATGTTGCGAAATTCGGGTTCGGAGATGACCCGTTTGTTGTTAGCCGGCTAATCGAGTTTTACTCGGTGATTCTTGAGATGGGTGCTGCCCAATTGGTGTTTGATAAAAGTCCTAGCAAAGATGTGGTGGTGTGGACGGCGATGGTTGATGGGTATGGGAAGATTGGGGATGTTGAGAATGCACGGAAGGTGTTCGATGAAATGCCTGAGAGAAATGCTGTGTCGTGGAGTGCGATGATGGCTGCGTATTCTCGAGTGAGTGATTTTAGAGAGGTGGTTTGTTTGTTTAGGCAAATGCAAGAGGTGGGGACGAGGCCTAATGAGTCTGTTCTTGTTAGTGTTCTCACTGCCGCTGCTCATTTGGGTGCGGTGGCGCAAGGGTTGTGGGTGCACTCCTATGCTAAGAGGCACGGGCTTGAGTCGAATAGGATATTGGCCACTGCATTGGTTGATATGTACTCCAAATGTGGCTATGTGGAAGCAGCTATGAAGGTTTTTGAGGGCATTTGTAATAAGGATGCCCGAGCGTGGAATGCCATGATTACTGGGGTTGCGATGAATGGGGATGCAAGGAAATCGATTGAGCTGTTTGATAAATTGGTTGTAGATAAGATCCAACCTACAGAAACCACATTTGTTGCTGTTCTCTCGGCTTGTACCCATGCAAAAATGGTAGACAAGGGACTTGAACTGTTTGATCAAATGAGTACCCTTTATGGGGTTGAACCCGGGCTTCAGCACTATGCTTGTGTTGTTGACCTCTTGGCCAGAGCAGGCATGGTAGAGGAAGCTGAGAAGTTTATAGAGGACAAGATGGGAGGACTAGGAAGAGGGGATGCCAACGTGTGGGGGGCGTTACTGGGTGCGTGTAGAGTTCATGGGAATGTTGAACTGGGGGACAGAATTTGGAAAAAGCTGGCTGATATGGGAGTAGCCGATTGCGGTATTCATGTTCTTTCATATAACATGTACAAGGAAGCTGGCTTGGAATTGGAGGCAAAGAGAGTCCGAGATATGATCTCAGAAGGCGGAATGAAGAAGAAACCTGGTTCTAGTGTGATAGAGATAAATGGAGTGGCTGAAGAGCTCATTGTTGGTGATCTTTGTCCTCCACAAGCACAAGAAATGCTTAAGATACTTGATTCTTTTTGTAAAATGGTGAATTTGGAGGATGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

526

Amino Acids

57.97

Weight (kDa)

6.81

Isoelectric Point (pI)

38.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	174 - 206	1.1e-06	PPR repeat family
PPR_1	PF12854	175 - 202	4.8e-06	PPR repeat
PPR	PF01535	177 - 206	1.8e-07	PPR repeat
PPR_2	PF13041	307 - 354	6e-06	PPR repeat family
E_motif	PF20431	427 - 489	4.3e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56850 AT5G56850 AT5G56850 AT5G56850 AT5G56850 AT5G56850 AT5G56850 AT5G56850
fragaria_vesca	FvH4_1g07370 FvH4_1g07370 FvH4_1g07370 FvH4_1g07370
malus_domestica	MD02G1078500.v1.1 MD15G1206500.v1.1
prunus_persica	Prupe.7G210300_v2.0.a1
pyrus_communis	pycom02g06280 pycom15g18290
rosa_chinensis	RchiOBHm_Chr2g0093251
rosa_laevigata	RLG00000016383
rosa_multiflora	Rmu_sc0003724.1_g000019
rosa_roxburghii	Rroxscaffold_2G00148340
rosa_rugosa	Rorug02G0033900
rosa_samantha	Rh2AG080200 Rh2BG081200 Rh2CG083600 Rh2DG079100
rosa_wichuraiana	Rw2G006680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1248
AccBSI	CCGCTC	1 cut(s)	136
AccI	GTMKAC	1 cut(s)	1077
AccII	CGCG	3 cut(s)	131, 251, 263
AclWI	GGATC	1 cut(s)	1009
AcoI	YGGCCR	2 cut(s)	837, 1167
AcsI	RAATTY	3 cut(s)	413, 1305, 1564
AcuI	CTGAAG	2 cut(s)	1121, 1503
AfaI	GTAC	5 cut(s)	227, 860, 1060, 1111, 1373
AfiI	CCNNNNNNNGG	4 cut(s)	930, 1119, 1120, 1248
AflII	CTTAAG	1 cut(s)	1532
AflIII	ACRYGT	2 cut(s)	1245, 1368
AgsI	TTSAA	5 cut(s)	8, 193, 1091, 1127, 1292
AjnI	CCWGG	1 cut(s)	1447
AjuI	GAANNNNNNNTTGG	2 cut(s)	818, 850
AloI	GAACNNNNNNTCC	2 cut(s)	378, 410
AluBI	AGCT	7 cut(s)	379, 887, 988, 1193, 1318, 1382, 1489
AluI	AGCT	7 cut(s)	379, 887, 988, 1193, 1318, 1382, 1489
Alw21I	GWGCWC	2 cut(s)	795, 1491
Alw44I	GTGCAC	1 cut(s)	791
AlwI	GGATC	1 cut(s)	1009
Ama87I	CYCGRG	3 cut(s)	654, 924, 1130
AoxI	GGCC	3 cut(s)	716, 837, 1167
ApaLI	GTGCAC	1 cut(s)	791
ApeKI	GCWGC	5 cut(s)	272, 488, 644, 755, 884
ApoI	RAATTY	3 cut(s)	413, 1305, 1564
Asp700I	GAANNNNTTC	1 cut(s)	593
AspLEI	GCGC	5 cut(s)	133, 247, 253, 265, 778
AspS9I	GGNCC	1 cut(s)	364
AsuC2I	CCSGG	2 cut(s)	1131, 1132
AsuHPI	GGTGA	3 cut(s)	481, 1511, 1573
AvaI	CYCGRG	3 cut(s)	654, 924, 1130
AvaII	GGWCC	1 cut(s)	364
BaeGI	GKGCMC	1 cut(s)	795
BalI	TGGCCA	2 cut(s)	839, 1169
BanII	GRGCYC	1 cut(s)	1491
Bbv12I	GWGCWC	2 cut(s)	795, 1491
BbvI	GCAGC	5 cut(s)	259, 475, 631, 742, 896
BccI	CCATC	7 cut(s)	134, 210, 475, 538, 545, 634, 1210
BceAI	ACGGC	1 cut(s)	555
BcgI	CGANNNNNNTGC	2 cut(s)	960, 994
BciT130I	CCWGG	1 cut(s)	1449
BclI	TGATCA	3 cut(s)	237, 342, 1099
BcnI	CCSGG	2 cut(s)	1131, 1132
BfaI	CTAG	4 cut(s)	290, 516, 1226, 1455
BfmI	CTRYAG	1 cut(s)	1023
BfrI	CTTAAG	1 cut(s)	1532
BisI	GCNGC	9 cut(s)	134, 147, 150, 273, 489, 645, 753, 756, 885
BlsI	GCNGC	9 cut(s)	135, 148, 151, 274, 490, 646, 754, 757, 886
Bme1390I	CCNGG	3 cut(s)	1131, 1132, 1449
Bme18I	GGWCC	1 cut(s)	364
BmeT110I	CYCGRG	3 cut(s)	654, 924, 1130
BmgT120I	GGNCC	1 cut(s)	364
BmrFI	CCNGG	3 cut(s)	1131, 1132, 1449
BmrI	ACTGGG	3 cut(s)	957, 1271, 1304
BmsI	GCATC	3 cut(s)	910, 958, 1228
BmuI	ACTGGG	3 cut(s)	957, 1271, 1304
BplI	GAGNNNNNCTC	2 cut(s)	449, 481
BpuEI	CTTGAG	3 cut(s)	56, 497, 839
BpuMI	CCSGG	2 cut(s)	1131, 1132
Bsa29I	ATCGAT	1 cut(s)	980
BsaJI	CCNNGG	1 cut(s)	1130
BsaWI	WCCGGW	1 cut(s)	383
Bsc4I	CCNNNNNNNGG	4 cut(s)	930, 1119, 1120, 1248
Bse118I	RCCGGY	2 cut(s)	265, 447
Bse1I	ACTGG	3 cut(s)	952, 1266, 1299
BseBI	CCWGG	1 cut(s)	1449
BseCI	ATCGAT	1 cut(s)	980
BseDI	CCNNGG	1 cut(s)	1130
BseGI	GGATG	6 cut(s)	202, 577, 925, 973, 1243, 1579
BseLI	CCNNNNNNNGG	4 cut(s)	930, 1119, 1120, 1248
BseMII	CTCAG	4 cut(s)	366, 600, 1185, 1437
BseNI	ACTGG	3 cut(s)	952, 1266, 1299
BseRI	GAGGAG	3 cut(s)	29, 83, 128
BseSI	GKGCMC	1 cut(s)	795
BseXI	GCAGC	5 cut(s)	259, 475, 631, 742, 896
Bsh1236I	CGCG	3 cut(s)	131, 251, 263
BshFI	GGCC	3 cut(s)	718, 839, 1169
BshVI	ATCGAT	1 cut(s)	980
BsiHKAI	GWGCWC	2 cut(s)	795, 1491
BsiHKCI	CYCGRG	3 cut(s)	654, 924, 1130
BsiSI	CCGG	4 cut(s)	266, 384, 448, 1131
BslFI	GGGAC	3 cut(s)	724, 1098, 1313
BslI	CCNNNNNNNGG	4 cut(s)	930, 1119, 1120, 1248
BsmFI	GGGAC	3 cut(s)	724, 1098, 1313
BsmI	GAATGC	2 cut(s)	586, 940
BsnI	GGCC	3 cut(s)	718, 839, 1169
BsoBI	CYCGRG	3 cut(s)	654, 924, 1130
Bsp1286I	GDGCHC	2 cut(s)	795, 1491
Bsp1407I	TGTACA	2 cut(s)	225, 1371
Bsp143I	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
BspANI	GGCC	3 cut(s)	718, 839, 1169
BspCNI	CTCAG	4 cut(s)	367, 601, 1186, 1436
BspDI	ATCGAT	1 cut(s)	980
BspFNI	CGCG	3 cut(s)	131, 251, 263
BspPI	GGATC	1 cut(s)	1009
BspQI	GCTCTTC	1 cut(s)	1479
BspTI	CTTAAG	1 cut(s)	1532
BsrBI	CCGCTC	1 cut(s)	136
BsrFI	RCCGGY	2 cut(s)	265, 447
BsrGI	TGTACA	2 cut(s)	225, 1371
BsrI	ACTGG	3 cut(s)	952, 1266, 1299
BssAI	RCCGGY	2 cut(s)	265, 447
BssECI	CCNNGG	1 cut(s)	1130
BssMI	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
Bst2UI	CCWGG	1 cut(s)	1449
Bst4CI	ACNGT	2 cut(s)	16, 1095
Bst6I	CTCTTC	2 cut(s)	1225, 1479
BstAFI	CTTAAG	1 cut(s)	1532
BstAUI	TGTACA	2 cut(s)	225, 1371
BstC8I	GCNNGC	7 cut(s)	181, 249, 352, 449, 1177, 1320, 1384
BstDEI	CTNAG	5 cut(s)	375, 609, 804, 1194, 1423
BstF5I	GGATG	6 cut(s)	202, 577, 925, 973, 1243, 1579
BstFNI	CGCG	3 cut(s)	131, 251, 263
BstHHI	GCGC	5 cut(s)	133, 247, 253, 265, 778
BstKTI	GATC	8 cut(s)	31, 240, 315, 345, 1017, 1102, 1422, 1504
BstMBI	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
BstMWI	GCNNNNNNNGC	6 cut(s)	51, 158, 269, 407, 641, 935
BstNI	CCWGG	1 cut(s)	1449
BstNSI	RCATGY	1 cut(s)	1372
BstSCI	CCNGG	3 cut(s)	1129, 1130, 1447
BstSFI	CTRYAG	1 cut(s)	1023
BstSLI	GKGCMC	1 cut(s)	795
BstUI	CGCG	3 cut(s)	131, 251, 263
BstV1I	GCAGC	5 cut(s)	259, 475, 631, 742, 896
BstX2I	RGATCY	1 cut(s)	1014
BstXI	CCANNNNNNTGG	1 cut(s)	847
BstYI	RGATCY	1 cut(s)	1014
Bsu15I	ATCGAT	1 cut(s)	980
BsuRI	GGCC	3 cut(s)	718, 839, 1169
BsuTUI	ATCGAT	1 cut(s)	980
BtgZI	GCGATG	4 cut(s)	112, 557, 650, 971
BtsCI	GGATG	6 cut(s)	202, 577, 925, 973, 1243, 1579
BtsI	GCAGTG	2 cut(s)	747, 840
BtsIMutI	CAGTG	2 cut(s)	747, 840
Cac8I	GCNNGC	7 cut(s)	181, 249, 352, 449, 1177, 1320, 1384
CfoI	GCGC	5 cut(s)	133, 247, 253, 265, 778
Cfr10I	RCCGGY	2 cut(s)	265, 447
Cfr13I	GGNCC	1 cut(s)	364
Cfr9I	CCCGGG	1 cut(s)	1130
ClaI	ATCGAT	1 cut(s)	980
CseI	GACGC	1 cut(s)	167
CsiI	ACCWGGT	1 cut(s)	1447
Csp6I	GTAC	5 cut(s)	226, 859, 1059, 1110, 1372
CspCI	CAANNNNNGTGG	4 cut(s)	767, 802, 1021, 1056
CviQI	GTAC	5 cut(s)	226, 859, 1059, 1110, 1372
DdeI	CTNAG	5 cut(s)	375, 609, 804, 1194, 1423
DpnI	GATC	8 cut(s)	30, 239, 314, 344, 1016, 1101, 1421, 1503
DpnII	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
EaeI	YGGCCR	2 cut(s)	837, 1167
Eam1104I	CTCTTC	2 cut(s)	1225, 1479
EarI	CTCTTC	2 cut(s)	1225, 1479
EciI	GGCGGA	2 cut(s)	133, 1446
Ecl136II	GAGCTC	1 cut(s)	1489
Eco147I	AGGCCT	1 cut(s)	718
Eco24I	GRGCYC	1 cut(s)	1491
Eco47I	GGWCC	1 cut(s)	364
Eco53kI	GAGCTC	1 cut(s)	1489
Eco57I	CTGAAG	2 cut(s)	1121, 1503
Eco88I	CYCGRG	3 cut(s)	654, 924, 1130
EcoICRI	GAGCTC	1 cut(s)	1489
EcoRII	CCWGG	1 cut(s)	1447
EcoT38I	GRGCYC	1 cut(s)	1491
FalI	AAGNNNNNCTT	2 cut(s)	1515, 1547
FaqI	GGGAC	3 cut(s)	724, 1098, 1313
FauI	CCCGC	1 cut(s)	342
FbaI	TGATCA	3 cut(s)	237, 342, 1099
FblI	GTMKAC	1 cut(s)	1077
Fnu4HI	GCNGC	9 cut(s)	134, 147, 150, 273, 489, 645, 753, 756, 885
FokI	GGATG	5 cut(s)	189, 584, 932, 980, 1250
FriOI	GRGCYC	1 cut(s)	1491
Fsp4HI	GCNGC	9 cut(s)	134, 147, 150, 273, 489, 645, 753, 756, 885
FspBI	CTAG	4 cut(s)	290, 516, 1226, 1455
GlaI	GCGC	5 cut(s)	132, 246, 252, 264, 777
GluI	GCNGC	9 cut(s)	134, 147, 150, 273, 489, 645, 753, 756, 885
HaeIII	GGCC	3 cut(s)	718, 839, 1169
HapII	CCGG	4 cut(s)	266, 384, 448, 1131
HgaI	GACGC	1 cut(s)	167
HhaI	GCGC	5 cut(s)	133, 247, 253, 265, 778
Hin6I	GCGC	5 cut(s)	131, 245, 251, 263, 776
HinP1I	GCGC	5 cut(s)	131, 245, 251, 263, 776
HincII	GTYRAC	1 cut(s)	1159
HindII	GTYRAC	1 cut(s)	1159
HinfI	GANTC	6 cut(s)	4, 472, 725, 821, 1407, 1544
HpaII	CCGG	4 cut(s)	266, 384, 448, 1131
HphI	GGTGA	3 cut(s)	481, 1511, 1573
Hpy166II	GTNNAC	5 cut(s)	327, 537, 793, 1078, 1159
Hpy188I	TCNGA	5 cut(s)	242, 376, 425, 1412, 1426
Hpy188III	TCNNGA	3 cut(s)	290, 476, 654
Hpy8I	GTNNAC	5 cut(s)	327, 537, 793, 1078, 1159
HpyAV	CCTTC	4 cut(s)	381, 583, 886, 1421
HpyCH4III	ACNGT	2 cut(s)	16, 1095
HpyCH4IV	ACGT	1 cut(s)	1245
HpyCH4V	TGCA	7 cut(s)	54, 584, 700, 793, 845, 971, 1067
HpyF10VI	GCNNNNNNNGC	6 cut(s)	51, 158, 269, 407, 641, 935
HpyF3I	CTNAG	5 cut(s)	375, 609, 804, 1194, 1423
HpySE526I	ACGT	1 cut(s)	1245
HspAI	GCGC	5 cut(s)	131, 245, 251, 263, 776
KroI	GCCGGC	1 cut(s)	447
KroNI	GCCGGC	1 cut(s)	449
Ksp22I	TGATCA	3 cut(s)	237, 342, 1099
Kzo9I	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
LguI	GCTCTTC	1 cut(s)	1479
LmnI	GCTCC	1 cut(s)	141
Lsp1109I	GCAGC	5 cut(s)	259, 475, 631, 742, 896
LweI	GCATC	3 cut(s)	910, 958, 1228
MabI	ACCWGGT	1 cut(s)	1447
MaeI	CTAG	4 cut(s)	290, 516, 1226, 1455
MaeII	ACGT	1 cut(s)	1245
MaeIII	GTNAC	2 cut(s)	302, 1257
MalI	GATC	8 cut(s)	30, 239, 314, 344, 1016, 1101, 1421, 1503
MbiI	CCGCTC	1 cut(s)	136
MboI	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
MboII	GAAGA	6 cut(s)	181, 574, 1242, 1450, 1453, 1496
MfeI	CAATTG	1 cut(s)	494
MflI	RGATCY	1 cut(s)	1014
MhlI	GDGCHC	2 cut(s)	795, 1491
MlsI	TGGCCA	2 cut(s)	839, 1169
MluCI	AATT	7 cut(s)	370, 413, 494, 998, 1305, 1391, 1564
MluNI	TGGCCA	2 cut(s)	839, 1169
MlyI	GAGTC	3 cut(s)	734, 830, 1416
MmeI	TCCRAC	1 cut(s)	1042
Mox20I	TGGCCA	2 cut(s)	839, 1169
MroNI	GCCGGC	1 cut(s)	447
MroXI	GAANNNNTTC	1 cut(s)	593
MscI	TGGCCA	2 cut(s)	839, 1169
MseI	TTAA	1 cut(s)	1533
MslI	CAYNNNNRTG	5 cut(s)	221, 402, 765, 798, 1284
Msp20I	TGGCCA	2 cut(s)	839, 1169
MspA1I	CMGCKG	1 cut(s)	755
MspCI	CTTAAG	1 cut(s)	1532
MspI	CCGG	4 cut(s)	266, 384, 448, 1131
MspR9I	CCNGG	3 cut(s)	1131, 1132, 1449
MunI	CAATTG	1 cut(s)	494
Mva1269I	GAATGC	2 cut(s)	586, 940
MvaI	CCWGG	1 cut(s)	1449
MvnI	CGCG	3 cut(s)	131, 251, 263
MwoI	GCNNNNNNNGC	6 cut(s)	51, 158, 269, 407, 641, 935
NaeI	GCCGGC	1 cut(s)	449
NciI	CCSGG	2 cut(s)	1131, 1132
NdeII	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
NgoMIV	GCCGGC	1 cut(s)	447
NmeAIII	GCCGAG	1 cut(s)	1031
NspI	RCATGY	1 cut(s)	1372
PaeR7I	CTCGAG	1 cut(s)	654
PceI	AGGCCT	1 cut(s)	718
PciI	ACATGT	1 cut(s)	1368
PciSI	GCTCTTC	1 cut(s)	1479
PcsI	WCGNNNNNNNCGW	1 cut(s)	632
PctI	GAATGC	2 cut(s)	586, 940
PdiI	GCCGGC	1 cut(s)	449
PdmI	GAANNNNTTC	1 cut(s)	593
PfeI	GAWTC	3 cut(s)	4, 472, 1544
PflMI	CCANNNNNTGG	1 cut(s)	1248
PkrI	GCNGC	9 cut(s)	135, 148, 151, 274, 490, 646, 754, 757, 886
PleI	GAGTC	3 cut(s)	733, 829, 1415
PpsI	GAGTC	3 cut(s)	733, 829, 1415
PscI	ACATGT	1 cut(s)	1368
Psp124BI	GAGCTC	1 cut(s)	1491
Psp6I	CCWGG	1 cut(s)	1447
PspGI	CCWGG	1 cut(s)	1447
PspPI	GGNCC	1 cut(s)	364
PsuI	RGATCY	1 cut(s)	1014
RsaI	GTAC	5 cut(s)	227, 860, 1060, 1111, 1373
RsaNI	GTAC	5 cut(s)	226, 859, 1059, 1110, 1372
RseI	CAYNNNNRTG	5 cut(s)	221, 402, 765, 798, 1284
SacI	GAGCTC	1 cut(s)	1491
SapI	GCTCTTC	1 cut(s)	1479
SaqAI	TTAA	1 cut(s)	1533
SatI	GCNGC	9 cut(s)	134, 147, 150, 273, 489, 645, 753, 756, 885
Sau3AI	GATC	8 cut(s)	28, 237, 312, 342, 1014, 1099, 1419, 1501
Sau96I	GGNCC	1 cut(s)	364
SchI	GAGTC	3 cut(s)	734, 830, 1416
ScrFI	CCNGG	3 cut(s)	1131, 1132, 1449
SduI	GDGCHC	2 cut(s)	795, 1491
SexAI	ACCWGGT	1 cut(s)	1447
SfaNI	GCATC	3 cut(s)	910, 958, 1228
SfcI	CTRYAG	1 cut(s)	1023
Sfr274I	CTCGAG	1 cut(s)	654
SgrAI	CRCCGGYG	1 cut(s)	265
SinI	GGWCC	1 cut(s)	364
SlaI	CTCGAG	1 cut(s)	654
SmaI	CCCGGG	1 cut(s)	1132
SmiMI	CAYNNNNRTG	5 cut(s)	221, 402, 765, 798, 1284
SmlI	CTYRAG	5 cut(s)	71, 476, 654, 818, 1532
SmoI	CTYRAG	5 cut(s)	71, 476, 654, 818, 1532
Sse9I	AATT	7 cut(s)	370, 413, 494, 998, 1305, 1391, 1564
SseBI	AGGCCT	1 cut(s)	718
SspMI	CTAG	4 cut(s)	290, 516, 1226, 1455
SstI	GAGCTC	1 cut(s)	1491
StuI	AGGCCT	1 cut(s)	718
StyD4I	CCNGG	3 cut(s)	1129, 1130, 1447
TaaI	ACNGT	2 cut(s)	16, 1095
TaiI	ACGT	1 cut(s)	1248
TaqI	TCGA	6 cut(s)	356, 456, 597, 655, 824, 980
TasI	AATT	7 cut(s)	370, 413, 494, 998, 1305, 1391, 1564
TatI	WGTACW	3 cut(s)	225, 858, 1371
TauI	GCSGC	4 cut(s)	136, 149, 152, 755
TfiI	GAWTC	3 cut(s)	4, 472, 1544
Tru1I	TTAA	1 cut(s)	1533
Tru9I	TTAA	1 cut(s)	1533
TscAI	CASTG	2 cut(s)	754, 847
TseI	GCWGC	5 cut(s)	272, 488, 644, 755, 884
TspDTI	ATGAA	9 cut(s)	211, 386, 615, 905, 974, 1268, 1340, 1350, 1451
TspGWI	ACGGA	2 cut(s)	321, 601
TspMI	CCCGGG	1 cut(s)	1130
TspRI	CASTG	2 cut(s)	754, 847
Van91I	CCANNNNNTGG	1 cut(s)	1248
Vha464I	CTTAAG	1 cut(s)	1532
VneI	GTGCAC	1 cut(s)	791
VpaK11BI	GGWCC	1 cut(s)	364
XapI	RAATTY	3 cut(s)	413, 1305, 1564
XbaI	TCTAGA	1 cut(s)	289
XceI	RCATGY	1 cut(s)	1372
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1177
XhoI	CTCGAG	1 cut(s)	654
XmaI	CCCGGG	1 cut(s)	1130
XmiI	GTMKAC	1 cut(s)	1077
XmnI	GAANNNNTTC	1 cut(s)	593
XspI	CTAG	4 cut(s)	290, 516, 1226, 1455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.