Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0013589

Physical Location & Seq

Genomic Coordinates Reverse (-)

6811054 .. 6816131

Gene Structure 5078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0085000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGTCGTTTCTGAGACGGAGGAAAGGGAAGGCGGAGAATTTGGAGCCGGACGAGAGTGAGACAGAGAAGGAACACGAACCCGGTGAGAAGCAAACGACGACGACGCGTCGTCGGAGAAGGAACCCGAACCCGAACCCGAACCGGTGGTCGTGCGTGGCCAACTGCTGCTGGCTCATCGGAGTCATATGCTCGATCTGGTGGTTCCTGCTGTTCTTGCTCAACGCAATGCCGGCGTCGTTTCCTCAGTACGTGACGGAGGCGATAACGGGTCCGGTTTCCGACCCGCCCGGAGTGAAATTGAGGAAGGAGGGCTTGACGGCGAAGCACCCGGTGGTGTTTGTGCCCGGAATTGTCACCGGCGGGCTCGAATTGTGGGAAGGGCATAGCTGCGCCGATGGGTTGTTTAGGAAGAGATTGTGGGGCGGCACATTTGGGGAATTGTATAAAAGACCATTATGCTGGGTTGAACATATGTCTCTGGACAATGAAACTGGACTGGACCCTGCAGGTATAAGGGTTAGGCCTGTATCTGGTCTTGTGGCAGCTGATTACTTTGCCCCTGGTTACTTTGTGTGGGCAGTTTTAATTGCTAATTTGGCTCGCATTGGATATGAGGAGAAAACCATGTATATGGCTTCATATGATTGGAGATTATCGTTTCAGAATACAGAGGTTAGGGACCAAACTTTGAGCAGAATAAAAAGTAATATAGAACTTATGGTAGCTACAAATGGTGGTAACAAGGTGGTTGTTCTCCCACATTCAATGGGTGTTCTGTACTTTCTGCATTTTATGAAATGGGTTGAGGCACCAGCTCCAATGGGAGGTGGTGGTGGATCAGATTGGTGTGCTAAGCATATTAAAGCTGTAATGAACATCGGTGGCCCCTTTTTAGGGGTTCCAAAAGCTGTTGCTGGACTTTTCTCTATTGAGGCCAAAGACATTGCTGTTGCCAGGGCTTTTGCACCAGGTGTTTTGGATAAGGATGTTTTTGGTCTCCAAACCTTACAACATATGATGCGGATGACCCGGACATGGGATTCAACTATGTCTATGATACCAAAAGGCGGGGACACAATATGGGGTGGTCTTGACTGGTCACCTGAAGAATACTGCCATTGCAATGCGAAGAAGTTGAAGAATAATGATACGAAAGATGCAGAGCCATATGGAGTAAATTATGGGAGGTTTATATCATTTGGGAAAGACGTAGCAGAGACGCATTCCTCCAAGATTGAGAGGATCGATTTTAGGGATGCTGTTAAGGGTAATTTACTTGCGAATGCTACCCATTGTGATGTATGGACAGAGTATCATGACATGGGTGTTGGGGGTGTCAAAGCTGTTTCAGATTACAAAATCTACACAGCTGGATCAATTTTGGATCTGCTTCATTTTGTTGCGCCCAAATTGATGGCACGTGGGGATGCTCATTTTTCGTATGGAATTGCGGACAATTTGGATGACCCCAAGTATGAACACTACAAATATTGGTCAAACCCCCTAGAAACAAGATTACCAAATGCTCCTGATATGGAGATCTATTCTATGTATGGAGTTGGCATCCCTACCGAAAGAGCATATGTGTATAAGTTAACTCCTACTGCTGAATGCTACATTCCCTTTCAAATAGATACCTCAGCAGAGGGTGGAAGTGACAACCCGTGTTTAAAAGGTGGAGTGTACTCCGCTGATGGGGATGAAACTGTCCCGGTGTTGAGTGCAGGTTTCATGTGTGCTAAAGCCTGGAGAGGAAAGACCCGTTTCAACCCTTCTGGCATTCGTACTTACTTAAGGGAGTACGACCATGCCCCTCCAGCTAATCTTCTAGAGGGCCGGGGTACCCAAAGTGGTGCTCATGTTGATATAATGGGAAACTTTGCTTTAATTGAGGATGTTTTAAGAGTAGCAGCAGGCGCTACGGGAGATGAATTGGGTGGAGATAAAGTGCACTCTGATATTTTCAAGTGGTCTGAAAGGATCAATATAGATCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009908 GO:0010093 GO:0010097 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048449 GO:0048455 GO:0048466 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K-box SRF-TF

Protein Analysis

665

Amino Acids

73.86

Weight (kDa)

6.25

Isoelectric Point (pI)

40.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LCAT	PF02450	135 - 625	1.3e-62	Lecithin:cholesterol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013589)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12260
malus_domestica	MD02G1136500.v1.1 MD15G1250200.v1.1
prunus_persica	Prupe.7G164100_v2.0.a1 Prupe.7G164100_v2.0.a1
pyrus_communis	pycom15g22050
rosa_chinensis	RchiOBHm_Chr2g0100071
rosa_laevigata	RLG00000016933
rosa_multiflora	Rmu_sc0000164.1_g000022
rosa_roxburghii	Rroxscaffold_2G00142600
rosa_rugosa	Rorug02G0085000 Rorug02G0085100 Rorug02G0085200
rosa_samantha	Rh2AG134100 Rh2BG137800 Rh2CG139200 Rh2DG139500
rosa_wichuraiana	Rw2G010460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	497, 1715
Acc65I	GGTACC	1 cut(s)	1841
AccB1I	GGYRCC	2 cut(s)	808, 1841
AccII	CGCG	1 cut(s)	106
AciI	CCGC	8 cut(s)	32, 284, 360, 423, 1021, 1068, 1451, 1689
AclWI	GGATC	5 cut(s)	844, 1250, 1381, 1392, 1988
AcoI	YGGCCR	1 cut(s)	156
AcsI	RAATTY	1 cut(s)	37
AcuI	CTGAAG	1 cut(s)	1125
AcvI	CACGTG	1 cut(s)	1421
AcyI	GRCGYC	1 cut(s)	233
AdeI	CACNNNGTG	2 cut(s)	331, 971
AfaI	GTAC	6 cut(s)	248, 779, 1685, 1786, 1802, 1843
AfiI	CCNNNNNNNGG	8 cut(s)	530, 824, 893, 894, 1035, 1036, 1067, 1695
AflII	CTTAAG	1 cut(s)	1792
AflIII	ACRYGT	1 cut(s)	104
AgeI	ACCGGT	1 cut(s)	141
AgsI	TTSAA	7 cut(s)	467, 765, 1044, 1138, 1628, 1768, 1966
AhdI	GACNNNNNGTC	2 cut(s)	105, 108
AjnI	CCWGG	4 cut(s)	559, 953, 967, 1745
AluBI	AGCT	9 cut(s)	387, 545, 725, 815, 866, 908, 1343, 1370, 1820
AluI	AGCT	9 cut(s)	387, 545, 725, 815, 866, 908, 1343, 1370, 1820
Alw21I	GWGCWC	2 cut(s)	1858, 1953
Alw26I	GTCTC	5 cut(s)	7, 53, 480, 1001, 1211
Alw44I	GTGCAC	1 cut(s)	1949
AlwI	GGATC	5 cut(s)	844, 1250, 1381, 1392, 1988
AoxI	GGCC	5 cut(s)	156, 521, 883, 933, 1834
ApaLI	GTGCAC	1 cut(s)	1949
ApeKI	GCWGC	4 cut(s)	165, 387, 542, 1910
ApoI	RAATTY	1 cut(s)	37
ArsI	GACNNNNNNTTYG	2 cut(s)	131, 163
AsiGI	ACCGGT	1 cut(s)	141
Asp718I	GGTACC	1 cut(s)	1841
AspLEI	GCGC	3 cut(s)	392, 1405, 1919
AspS9I	GGNCC	5 cut(s)	269, 499, 679, 884, 1834
AsuC2I	CCSGG	7 cut(s)	81, 288, 329, 345, 1030, 1712, 1838
AsuHPI	GGTGA	3 cut(s)	95, 346, 1092
AvaII	GGWCC	3 cut(s)	269, 499, 679
BaeGI	GKGCMC	2 cut(s)	345, 1953
BalI	TGGCCA	1 cut(s)	158
BanI	GGYRCC	2 cut(s)	808, 1841
BanII	GRGCYC	1 cut(s)	366
BbrPI	CACGTG	1 cut(s)	1421
Bbv12I	GWGCWC	2 cut(s)	1858, 1953
BbvCI	CCTCAGC	1 cut(s)	1639
BbvI	GCAGC	4 cut(s)	152, 374, 554, 1922
BccI	CCATC	3 cut(s)	389, 1408, 1688
BceAI	ACGGC	1 cut(s)	333
BciT130I	CCWGG	4 cut(s)	561, 955, 969, 1747
BcnI	CCSGG	7 cut(s)	81, 288, 329, 345, 1030, 1712, 1838
BcoDI	GTCTC	5 cut(s)	7, 53, 480, 1001, 1211
BfaI	CTAG	2 cut(s)	1505, 1829
BfmI	CTRYAG	1 cut(s)	504
BfoI	RGCGCY	1 cut(s)	1920
BfrI	CTTAAG	1 cut(s)	1792
BfuAI	ACCTGC	2 cut(s)	497, 1715
BglII	AGATCT	2 cut(s)	1539, 1990
BisI	GCNGC	5 cut(s)	166, 388, 424, 543, 1911
BlpI	GCTNAGC	1 cut(s)	852
BlsI	GCNGC	5 cut(s)	167, 389, 425, 544, 1912
Bme18I	GGWCC	3 cut(s)	269, 499, 679
BmeRI	GACNNNNNGTC	2 cut(s)	105, 108
BmgT120I	GGNCC	5 cut(s)	269, 499, 679, 884, 1834
BmsI	GCATC	5 cut(s)	1008, 1147, 1246, 1417, 1572
BpmI	CTGGAG	2 cut(s)	1768, 1800
Bpu10I	CCTNAGC	1 cut(s)	1639
Bpu1102I	GCTNAGC	1 cut(s)	852
BpuMI	CCSGG	7 cut(s)	81, 288, 329, 345, 1030, 1712, 1838
Bsa29I	ATCGAT	1 cut(s)	1245
BsaAI	YACGTR	2 cut(s)	250, 1421
BsaHI	GRCGYC	1 cut(s)	233
BsaI	GGTCTC	1 cut(s)	1001
BsaJI	CCNNGG	3 cut(s)	559, 954, 1837
BsaWI	WCCGGW	2 cut(s)	141, 271
BsaXI	ACNNNNNCTCC	2 cut(s)	1932, 1962
Bsc4I	CCNNNNNNNGG	8 cut(s)	530, 824, 893, 894, 1035, 1036, 1067, 1695
Bse118I	RCCGGY	3 cut(s)	141, 229, 356
Bse1I	ACTGG	3 cut(s)	496, 501, 1100
Bse3DI	GCAATG	4 cut(s)	231, 942, 1117, 1129
BseBI	CCWGG	4 cut(s)	561, 955, 969, 1747
BseCI	ATCGAT	1 cut(s)	1245
BseDI	CCNNGG	3 cut(s)	559, 954, 1837
BseGI	GGATG	8 cut(s)	991, 1029, 1261, 1432, 1468, 1563, 1705, 1900
BseLI	CCNNNNNNNGG	8 cut(s)	530, 824, 893, 894, 1035, 1036, 1067, 1695
BseMI	GCAATG	4 cut(s)	231, 942, 1117, 1129
BseMII	CTCAG	2 cut(s)	257, 1653
BseNI	ACTGG	3 cut(s)	496, 501, 1100
BseRI	GAGGAG	1 cut(s)	629
BseSI	GKGCMC	2 cut(s)	345, 1953
BseXI	GCAGC	4 cut(s)	152, 374, 554, 1922
BseYI	CCCAGC	1 cut(s)	459
BsgI	GTGCAG	1 cut(s)	1743
Bsh1236I	CGCG	1 cut(s)	106
BshFI	GGCC	5 cut(s)	158, 523, 885, 935, 1836
BshNI	GGYRCC	2 cut(s)	808, 1841
BshTI	ACCGGT	1 cut(s)	141
BshVI	ATCGAT	1 cut(s)	1245
BsiHKAI	GWGCWC	2 cut(s)	1858, 1953
BslFI	GGGAC	3 cut(s)	692, 1085, 1694
BslI	CCNNNNNNNGG	8 cut(s)	530, 824, 893, 894, 1035, 1036, 1067, 1695
BsmAI	GTCTC	5 cut(s)	7, 53, 480, 1001, 1211
BsmBI	CGTCTC	2 cut(s)	7, 1211
BsmFI	GGGAC	3 cut(s)	692, 1085, 1694
BsmI	GAATGC	4 cut(s)	1222, 1288, 1616, 1779
BsnI	GGCC	5 cut(s)	158, 523, 885, 935, 1836
Bso31I	GGTCTC	1 cut(s)	1001
Bsp1286I	GDGCHC	4 cut(s)	345, 366, 1858, 1953
Bsp143I	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
Bsp1720I	GCTNAGC	1 cut(s)	852
BspACI	CCGC	8 cut(s)	32, 284, 360, 423, 1021, 1068, 1451, 1689
BspANI	GGCC	5 cut(s)	158, 523, 885, 935, 1836
BspCNI	CTCAG	2 cut(s)	256, 1652
BspDI	ATCGAT	1 cut(s)	1245
BspFNI	CGCG	1 cut(s)	106
BspHI	TCATGA	1 cut(s)	1315
BspMAI	CTGCAG	1 cut(s)	508
BspMI	ACCTGC	2 cut(s)	497, 1715
BspPI	GGATC	5 cut(s)	844, 1250, 1381, 1392, 1988
BspT107I	GGYRCC	2 cut(s)	808, 1841
BspTI	CTTAAG	1 cut(s)	1792
BspTNI	GGTCTC	1 cut(s)	1001
BsrDI	GCAATG	4 cut(s)	231, 942, 1117, 1129
BsrFI	RCCGGY	3 cut(s)	141, 229, 356
BsrI	ACTGG	3 cut(s)	496, 501, 1100
BssAI	RCCGGY	3 cut(s)	141, 229, 356
BssECI	CCNNGG	3 cut(s)	559, 954, 1837
BssMI	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
BssNI	GRCGYC	1 cut(s)	233
Bst2UI	CCWGG	4 cut(s)	561, 955, 969, 1747
Bst4CI	ACNGT	1 cut(s)	1708
Bst6I	CTCTTC	1 cut(s)	404
BstACI	GRCGYC	1 cut(s)	233
BstAFI	CTTAAG	1 cut(s)	1792
BstBAI	YACGTR	2 cut(s)	250, 1421
BstC8I	GCNNGC	5 cut(s)	170, 231, 362, 601, 1915
BstDEI	CTNAG	4 cut(s)	11, 243, 852, 1639
BstEII	GGTNACC	1 cut(s)	1098
BstF5I	GGATG	8 cut(s)	991, 1029, 1261, 1432, 1468, 1563, 1705, 1900
BstFNI	CGCG	1 cut(s)	106
BstH2I	RGCGCY	1 cut(s)	1920
BstHHI	GCGC	3 cut(s)	392, 1405, 1919
BstKTI	GATC	8 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1983, 1993
BstMAI	GTCTC	5 cut(s)	7, 53, 480, 1001, 1211
BstMBI	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
BstMWI	GCNNNNNNNGC	5 cut(s)	214, 230, 596, 1817, 1916
BstNI	CCWGG	4 cut(s)	561, 955, 969, 1747
BstPI	GGTNACC	1 cut(s)	1098
BstSFI	CTRYAG	1 cut(s)	504
BstSLI	GKGCMC	2 cut(s)	345, 1953
BstUI	CGCG	1 cut(s)	106
BstV1I	GCAGC	4 cut(s)	152, 374, 554, 1922
BstX2I	RGATCY	3 cut(s)	1384, 1539, 1990
BstXI	CCANNNNNNTGG	3 cut(s)	459, 631, 1414
BstYI	RGATCY	3 cut(s)	1384, 1539, 1990
Bsu15I	ATCGAT	1 cut(s)	1245
BsuRI	GGCC	5 cut(s)	158, 523, 885, 935, 1836
BsuTUI	ATCGAT	1 cut(s)	1245
BtsCI	GGATG	8 cut(s)	991, 1029, 1261, 1432, 1468, 1563, 1705, 1900
BveI	ACCTGC	2 cut(s)	497, 1715
Cac8I	GCNNGC	5 cut(s)	170, 231, 362, 601, 1915
CciI	TCATGA	1 cut(s)	1315
CfoI	GCGC	3 cut(s)	392, 1405, 1919
Cfr10I	RCCGGY	3 cut(s)	141, 229, 356
Cfr13I	GGNCC	5 cut(s)	269, 499, 679, 884, 1834
ClaI	ATCGAT	1 cut(s)	1245
CseI	GACGC	4 cut(s)	95, 112, 222, 1228
CsiI	ACCWGGT	1 cut(s)	967
Csp6I	GTAC	6 cut(s)	247, 778, 1684, 1785, 1801, 1842
CspAI	ACCGGT	1 cut(s)	141
CviAII	CATG	7 cut(s)	625, 1035, 1316, 1321, 1732, 1808, 1859
CviQI	GTAC	6 cut(s)	247, 778, 1684, 1785, 1801, 1842
DdeI	CTNAG	4 cut(s)	11, 243, 852, 1639
DpnI	GATC	8 cut(s)	194, 838, 1244, 1375, 1386, 1541, 1982, 1992
DpnII	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
DraI	TTTAAA	1 cut(s)	1671
DraIII	CACNNNGTG	2 cut(s)	331, 971
DriI	GACNNNNNGTC	2 cut(s)	105, 108
EaeI	YGGCCR	1 cut(s)	156
Eam1104I	CTCTTC	1 cut(s)	404
Eam1105I	GACNNNNNGTC	2 cut(s)	105, 108
EarI	CTCTTC	1 cut(s)	404
EciI	GGCGGA	1 cut(s)	47
Eco147I	AGGCCT	1 cut(s)	523
Eco24I	GRGCYC	1 cut(s)	366
Eco31I	GGTCTC	1 cut(s)	1001
Eco47I	GGWCC	3 cut(s)	269, 499, 679
Eco57I	CTGAAG	1 cut(s)	1125
Eco72I	CACGTG	1 cut(s)	1421
Eco91I	GGTNACC	1 cut(s)	1098
EcoO65I	GGTNACC	1 cut(s)	1098
EcoRII	CCWGG	4 cut(s)	559, 953, 967, 1745
EcoT38I	GRGCYC	1 cut(s)	366
Esp3I	CGTCTC	2 cut(s)	7, 1211
FaeI	CATG	7 cut(s)	628, 1038, 1319, 1324, 1735, 1811, 1862
FalI	AAGNNNNNCTT	2 cut(s)	296, 328
FaqI	GGGAC	3 cut(s)	692, 1085, 1694
FatI	CATG	7 cut(s)	624, 1034, 1315, 1320, 1731, 1807, 1858
FauI	CCCGC	3 cut(s)	291, 353, 1061
FauNDI	CATATG	6 cut(s)	185, 471, 640, 1014, 1168, 1582
Fnu4HI	GCNGC	5 cut(s)	166, 388, 424, 543, 1911
FokI	GGATG	8 cut(s)	998, 1036, 1268, 1439, 1475, 1550, 1712, 1907
FriOI	GRGCYC	1 cut(s)	366
Fsp4HI	GCNGC	5 cut(s)	166, 388, 424, 543, 1911
FspBI	CTAG	2 cut(s)	1505, 1829
GlaI	GCGC	3 cut(s)	391, 1404, 1918
GluI	GCNGC	5 cut(s)	166, 388, 424, 543, 1911
GsaI	CCCAGC	1 cut(s)	463
GsuI	CTGGAG	2 cut(s)	1768, 1800
HaeII	RGCGCY	1 cut(s)	1920
HaeIII	GGCC	5 cut(s)	158, 523, 885, 935, 1836
HgaI	GACGC	4 cut(s)	95, 112, 222, 1228
HhaI	GCGC	3 cut(s)	392, 1405, 1919
Hin1I	GRCGYC	1 cut(s)	233
Hin1II	CATG	7 cut(s)	628, 1038, 1319, 1324, 1735, 1811, 1862
Hin6I	GCGC	3 cut(s)	390, 1403, 1917
HinP1I	GCGC	3 cut(s)	390, 1403, 1917
HincII	GTYRAC	1 cut(s)	1596
HindII	GTYRAC	1 cut(s)	1596
HinfI	GANTC	2 cut(s)	180, 1040
HpaI	GTTAAC	1 cut(s)	1596
HphI	GGTGA	3 cut(s)	95, 346, 1092
Hpy166II	GTNNAC	3 cut(s)	1596, 1684, 1951
Hpy188III	TCNNGA	5 cut(s)	479, 1091, 1316, 1529, 1829
Hpy8I	GTNNAC	3 cut(s)	1596, 1684, 1951
Hpy99I	CGWCG	6 cut(s)	100, 103, 106, 111, 114, 238
HpyAV	CCTTC	6 cut(s)	22, 61, 111, 298, 371, 1782
HpyCH4III	ACNGT	1 cut(s)	1708
HpyCH4IV	ACGT	3 cut(s)	249, 1209, 1420
HpyCH4V	TGCA	7 cut(s)	506, 787, 965, 1122, 1160, 1724, 1951
HpyF10VI	GCNNNNNNNGC	5 cut(s)	214, 230, 596, 1817, 1916
HpyF3I	CTNAG	4 cut(s)	11, 243, 852, 1639
HpySE526I	ACGT	3 cut(s)	249, 1209, 1420
Hsp92I	GRCGYC	1 cut(s)	233
Hsp92II	CATG	7 cut(s)	628, 1038, 1319, 1324, 1735, 1811, 1862
HspAI	GCGC	3 cut(s)	390, 1403, 1917
KpnI	GGTACC	1 cut(s)	1845
KroI	GCCGGC	1 cut(s)	229
KroNI	GCCGGC	1 cut(s)	231
KspAI	GTTAAC	1 cut(s)	1596
Kzo9I	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
LmnI	GCTCC	3 cut(s)	43, 820, 1531
Lsp1109I	GCAGC	4 cut(s)	152, 374, 554, 1922
LweI	GCATC	5 cut(s)	1008, 1147, 1246, 1417, 1572
MabI	ACCWGGT	1 cut(s)	967
MaeI	CTAG	2 cut(s)	1505, 1829
MaeII	ACGT	3 cut(s)	249, 1209, 1420
MaeIII	GTNAC	6 cut(s)	250, 352, 563, 737, 1098, 1655
MalI	GATC	8 cut(s)	194, 838, 1244, 1375, 1386, 1541, 1982, 1992
MboI	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
MboII	GAAGA	5 cut(s)	421, 1118, 1141, 1150, 1817
MflI	RGATCY	3 cut(s)	1384, 1539, 1990
MhlI	GDGCHC	4 cut(s)	345, 366, 1858, 1953
MlsI	TGGCCA	1 cut(s)	158
MluI	ACGCGT	1 cut(s)	104
MluNI	TGGCCA	1 cut(s)	158
MlyI	GAGTC	1 cut(s)	189
MmeI	TCCRAC	2 cut(s)	92, 303
Mox20I	TGGCCA	1 cut(s)	158
MroNI	GCCGGC	1 cut(s)	229
MscI	TGGCCA	1 cut(s)	158
MseI	TTAA	8 cut(s)	584, 861, 1263, 1595, 1670, 1793, 1886, 1901
MslI	CAYNNNNRTG	3 cut(s)	629, 1122, 1296
Msp20I	TGGCCA	1 cut(s)	158
MspA1I	CMGCKG	3 cut(s)	545, 1370, 1691
MspCI	CTTAAG	1 cut(s)	1792
Mva1269I	GAATGC	4 cut(s)	1222, 1288, 1616, 1779
MvaI	CCWGG	4 cut(s)	561, 955, 969, 1747
MvnI	CGCG	1 cut(s)	106
MwoI	GCNNNNNNNGC	5 cut(s)	214, 230, 596, 1817, 1916
NaeI	GCCGGC	1 cut(s)	231
NciI	CCSGG	7 cut(s)	81, 288, 329, 345, 1030, 1712, 1838
NdeI	CATATG	6 cut(s)	185, 471, 640, 1014, 1168, 1582
NdeII	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
NgoMIV	GCCGGC	1 cut(s)	229
NlaIII	CATG	7 cut(s)	628, 1038, 1319, 1324, 1735, 1811, 1862
NmuCI	GTSAC	4 cut(s)	250, 352, 1098, 1655
PagI	TCATGA	1 cut(s)	1315
PceI	AGGCCT	1 cut(s)	523
PctI	GAATGC	4 cut(s)	1222, 1288, 1616, 1779
PdiI	GCCGGC	1 cut(s)	231
PfeI	GAWTC	1 cut(s)	1040
PinAI	ACCGGT	1 cut(s)	141
PkrI	GCNGC	5 cut(s)	167, 389, 425, 544, 1912
PleI	GAGTC	1 cut(s)	188
PmaCI	CACGTG	1 cut(s)	1421
PmlI	CACGTG	1 cut(s)	1421
PpsI	GAGTC	1 cut(s)	188
Ppu21I	YACGTR	2 cut(s)	250, 1421
Psp6I	CCWGG	4 cut(s)	559, 953, 967, 1745
PspCI	CACGTG	1 cut(s)	1421
PspEI	GGTNACC	1 cut(s)	1098
PspFI	CCCAGC	1 cut(s)	459
PspGI	CCWGG	4 cut(s)	559, 953, 967, 1745
PspPI	GGNCC	5 cut(s)	269, 499, 679, 884, 1834
PstI	CTGCAG	1 cut(s)	508
PsuI	RGATCY	3 cut(s)	1384, 1539, 1990
PvuII	CAGCTG	2 cut(s)	545, 1370
RsaI	GTAC	6 cut(s)	248, 779, 1685, 1786, 1802, 1843
RsaNI	GTAC	6 cut(s)	247, 778, 1684, 1785, 1801, 1842
RseI	CAYNNNNRTG	3 cut(s)	629, 1122, 1296
SaqAI	TTAA	8 cut(s)	584, 861, 1263, 1595, 1670, 1793, 1886, 1901
SatI	GCNGC	5 cut(s)	166, 388, 424, 543, 1911
Sau3AI	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
Sau96I	GGNCC	5 cut(s)	269, 499, 679, 884, 1834
SbfI	CCTGCAGG	1 cut(s)	508
SchI	GAGTC	1 cut(s)	189
SdaI	CCTGCAGG	1 cut(s)	508
SduI	GDGCHC	4 cut(s)	345, 366, 1858, 1953
SexAI	ACCWGGT	1 cut(s)	967
SfaNI	GCATC	5 cut(s)	1008, 1147, 1246, 1417, 1572
SfcI	CTRYAG	1 cut(s)	504
SgrAI	CRCCGGYG	1 cut(s)	356
SinI	GGWCC	3 cut(s)	269, 499, 679
SmiMI	CAYNNNNRTG	3 cut(s)	629, 1122, 1296
SmlI	CTYRAG	1 cut(s)	1792
SmoI	CTYRAG	1 cut(s)	1792
Sse8387I	CCTGCAGG	1 cut(s)	508
SseBI	AGGCCT	1 cut(s)	523
SsiI	CCGC	8 cut(s)	32, 284, 360, 423, 1021, 1068, 1451, 1689
SspI	AATATT	1 cut(s)	1490
SspMI	CTAG	2 cut(s)	1505, 1829
StuI	AGGCCT	1 cut(s)	523
TaaI	ACNGT	1 cut(s)	1708
TaiI	ACGT	3 cut(s)	252, 1212, 1423
TaqI	TCGA	3 cut(s)	191, 366, 1245
TatI	WGTACW	2 cut(s)	777, 1683
TauI	GCSGC	1 cut(s)	426
TfiI	GAWTC	1 cut(s)	1040
Tru1I	TTAA	8 cut(s)	584, 861, 1263, 1595, 1670, 1793, 1886, 1901
Tru9I	TTAA	8 cut(s)	584, 861, 1263, 1595, 1670, 1793, 1886, 1901
TseFI	GTSAC	4 cut(s)	250, 352, 1098, 1655
TseI	GCWGC	4 cut(s)	165, 387, 542, 1910
Tsp45I	GTSAC	4 cut(s)	250, 352, 1098, 1655
TspDTI	ATGAA	9 cut(s)	501, 627, 809, 887, 1382, 1491, 1716, 1720, 1944
TspGWI	ACGGA	2 cut(s)	31, 269
Vha464I	CTTAAG	1 cut(s)	1792
VneI	GTGCAC	1 cut(s)	1949
VpaK11BI	GGWCC	3 cut(s)	269, 499, 679
XapI	RAATTY	1 cut(s)	37
XbaI	TCTAGA	1 cut(s)	1828
XspI	CTAG	2 cut(s)	1505, 1829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.