Rorug02G0130600

RALF-like 34

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0015168
Physical Location & Seq
Reverse (-)
11292119 .. 11293627
1509 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0130600.1

Sequence Viewer

Length: 1509 bp
ATGCCTCCTCCACCTTCTTCCCCTACCGACCCTGCCGCCGCTACCGTGGCTGGTGAGACACTTCCGACGCCTACACCAACGTTCGCTTCAGTCCTCTCAGCCGCGCAACCACTAGGGTTTGCAATTGATGACCTCCCAGCGCCTACAGTTGTGCATGGGGTTGCCACAGTTCAAATTTCGGAAGACTCTTTCCAGCGTGGGTTGGATCGGTGCAAGACAATTCTCGTCGGGAAACTCCTCTCGCCACCAAATGGTGTGATGCCGAAGGCACCTGAGTTAGCGAAGAGGTTGCGTTTGTTCTGGCATAACGTTCCAAATTGGAAGGTTGCCCCACTGGGCAAGGGTTTCTTCTTGCTACAATTTCAAACCCTTGATGATATGCAGCGCATTTGGTCATCGGGCTCTGTTAATTTAAATCCGGGAATCTTGAGGTTAATCAAATGGTCGCCGTCGTTCTCTCCGGCAACATACAGGAACACATTTGCGCAGATTTGGGTGCGTTTTTGGGACTTAGGGTTTGCCTACTGGGATCAACAGACACTTTTTGAAATCGCGCGGGGTGTTGGTACTCCAATCAAACTGGATGAGCGGACTGCCAGCAGGTCTTTGGGTCTCTATGCAAGAGTGTTGGTTGACGTTGATCTTTCAAAACCTCTCTGTGAGCAAGTTAGGGTTGTGCGCGCACATGGAGAGTCGGTGATTGCCTCAGTTGACTATGAGTCGGTCCCAGTTCTCTGTCAAGCCTGTGGCATTGTTGGTCACTCTATCAACAAGTGCAGGAACAAGAAGGAGCCACCGAGCTGTGATCAAGGCGGTGAAGCTTCTAATCCGCAGCCCAGCAAAGCTCATAGCATAGACAGGCCTGATGGTGATCCTATGGCAGATGTACGTGGCCGTTCCCGTTCCCGTTCGCGGAGGAAACGCCGTCCACGCCGACGCTCACGACCGGTTTCTGTGCTGCCAAAACATGACCTTGTGGGGGCAGAAAGATCGCACCTTCAGCAAGCACCGCCCTCCTCTGCCGGCCAGCCAACTGGTGTTACACATGAAAATGGAATGGTTTTAATCACCCAAAACCTCCCAGAACAACCAGCCTCGACGGTCTTTCACGTTGATGCGGCATTGCAGACAGTGGAGCCGGTTTTGTCTAACACTGAGGTTGGAGCGGCCTCCTCCTCCACTGTTTCGGTTCCTCCGGGTTTTCATACCATCATTGAACAAATTCCATGCAATGTTCCAGCCCTAGCTCAGAGGACTAACGCGCCATTAAGTGAAGACATTGAGATCACTTCAGCTAGTGCTTTCGATGTCTCTAACCCGGAGGTCGTTTCTGAAAACTTGATCAATGGTACGCTGGAGGAAGGTGAGTTCATTCCTGTTATGTCCAAAAAATCTATGAAGCTAGCTAAACCGACAGTGAAAGCTAAAGTCAAGACTAAGCAAGGGGCTAATAACCACAGTACAAAGTTGGCACTTGTCCAAAAAGGTGCCAAACATAAACTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RALF

Protein Analysis

502

Amino Acids

54.44

Weight (kDa)

9.38

Isoelectric Point (pI)

54.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 69 - 155 9.6e-11 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 213 - 260 6.8e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G67070
fragaria_vesca FvH4_1g16140
malus_domestica MD02G1173500.v1.1 MD15G1285000.v1.1
prunus_persica Prupe.7G132200_v2.0.a1
pyrus_communis pycom02g13980 pycom15g24770
rosa_chinensis RchiOBHm_Chr2g0105821
rosa_laevigata RLG00000017462
rosa_multiflora Rmu_co8385561.1_g000001
rosa_roxburghii Rroxscaffold_2G00137870
rosa_rugosa Rorug02G0130600
rosa_samantha Rh2BG191400 Rh2CG186100 Rh2DG188000
rosa_wichuraiana Rw2G014240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 486
Acc36I ACCTGC 1 cut(s) 591
AccB1I GGYRCC 2 cut(s) 268, 1487
AccB7I CCANNNNNTGG 1 cut(s) 251
AccBSI CCGCTC 2 cut(s) 589, 1166
AccII CGCG 6 cut(s) 104, 554, 556, 681, 913, 1262
AclI AACGTT 2 cut(s) 80, 309
AclWI GGATC 3 cut(s) 213, 537, 866
AcoI YGGCCR 2 cut(s) 892, 1024
AcsI RAATTY 2 cut(s) 174, 1221
AcuI CTGAAG 3 cut(s) 72, 983, 1275
AcyI GRCGYC 1 cut(s) 68
AfaI GTAC 4 cut(s) 568, 888, 1351, 1462
AfiI CCNNNNNNNGG 3 cut(s) 251, 912, 979
AgeI ACCGGT 1 cut(s) 946
AgsI TTSAA 5 cut(s) 173, 365, 548, 648, 1217
AhdI GACNNNNNGTC 1 cut(s) 718
AjuI GAANNNNNNNTTGG 2 cut(s) 70, 102
AloI GAACNNNNNNTCC 2 cut(s) 1352, 1384
AluBI AGCT 8 cut(s) 801, 821, 845, 1247, 1295, 1402, 1406, 1424
AluI AGCT 8 cut(s) 801, 821, 845, 1247, 1295, 1402, 1406, 1424
Alw26I GTCTC 3 cut(s) 50, 617, 1315
AlwI GGATC 3 cut(s) 213, 537, 866
AoxI GGCC 4 cut(s) 860, 892, 1024, 1167
ApeKI GCWGC 3 cut(s) 382, 832, 958
ApoI RAATTY 2 cut(s) 174, 1221
ArsI GACNNNNNNTTYG 2 cut(s) 500, 532
AsiGI ACCGGT 1 cut(s) 946
Asp700I GAANNNNTTC 1 cut(s) 1221
AspLEI GCGC 8 cut(s) 106, 142, 387, 487, 556, 681, 683, 1264
AspS9I GGNCC 1 cut(s) 724
AsuC2I CCSGG 3 cut(s) 420, 1197, 1319
AsuHPI GGTGA 6 cut(s) 65, 709, 827, 881, 1060, 1376
AsuNHI GCTAGC 1 cut(s) 1402
AvaII GGWCC 1 cut(s) 724
BanI GGYRCC 2 cut(s) 268, 1487
BanII GRGCYC 1 cut(s) 404
BbsI GAAGAC 2 cut(s) 189, 1281
BbvI GCAGC 3 cut(s) 394, 844, 945
BccI CCATC 2 cut(s) 860, 1217
BceAI ACGGC 3 cut(s) 433, 879, 909
BcgI CGANNNNNNTGC 4 cut(s) 271, 305, 972, 1006
BclI TGATCA 2 cut(s) 805, 1341
BcnI CCSGG 3 cut(s) 420, 1197, 1319
BcoDI GTCTC 3 cut(s) 50, 617, 1315
BfaI CTAG 4 cut(s) 113, 1244, 1296, 1403
BfmI CTRYAG 1 cut(s) 144
BfoI RGCGCY 1 cut(s) 143
BfuAI ACCTGC 1 cut(s) 591
BisI GCNGC 8 cut(s) 36, 39, 102, 383, 833, 959, 1119, 1167
BlsI GCNGC 8 cut(s) 37, 40, 103, 384, 834, 960, 1120, 1168
Bme1390I CCNGG 3 cut(s) 420, 1197, 1319
Bme18I GGWCC 1 cut(s) 724
BmeRI GACNNNNNGTC 1 cut(s) 718
BmgT120I GGNCC 1 cut(s) 724
BmiI GGNNCC 6 cut(s) 270, 726, 792, 1137, 1191, 1489
BmrFI CCNGG 3 cut(s) 420, 1197, 1319
BmrI ACTGGG 3 cut(s) 344, 535, 722
BmsI GCATC 2 cut(s) 249, 1105
BmtI GCTAGC 1 cut(s) 1406
BmuI ACTGGG 3 cut(s) 344, 535, 722
BpiI GAAGAC 2 cut(s) 189, 1281
BpmI CTGGAG 1 cut(s) 1376
BpuEI CTTGAG 1 cut(s) 448
BpuMI CCSGG 3 cut(s) 420, 1197, 1319
BsaAI YACGTR 1 cut(s) 890
BsaBI GATNNNNATC 1 cut(s) 870
BsaHI GRCGYC 1 cut(s) 68
BsaI GGTCTC 1 cut(s) 617
BsaJI CCNNGG 1 cut(s) 45
BsaWI WCCGGW 1 cut(s) 946
BsaXI ACNNNNNCTCC 2 cut(s) 681, 711
Bsc4I CCNNNNNNNGG 3 cut(s) 251, 912, 979
Bse118I RCCGGY 3 cut(s) 946, 1022, 1138
Bse1I ACTGG 5 cut(s) 339, 530, 585, 728, 1039
Bse3DI GCAATG 2 cut(s) 1121, 1237
Bse8I GATNNNNATC 1 cut(s) 870
BseDI CCNNGG 1 cut(s) 45
BseGI GGATG 1 cut(s) 589
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 3 cut(s) 251, 912, 979
BseMI GCAATG 2 cut(s) 1121, 1237
BseMII CTCAG 5 cut(s) 111, 264, 720, 1146, 1262
BseNI ACTGG 5 cut(s) 339, 530, 585, 728, 1039
BsePI GCGCGC 1 cut(s) 679
BseRI GAGGAG 4 cut(s) 227, 1006, 1162, 1165
BseXI GCAGC 3 cut(s) 394, 844, 945
BseYI CCCAGC 2 cut(s) 136, 836
BsgI GTGCAG 1 cut(s) 796
Bsh1236I CGCG 6 cut(s) 104, 554, 556, 681, 913, 1262
Bsh1285I CGRYCG 1 cut(s) 947
BshFI GGCC 4 cut(s) 862, 894, 1026, 1169
BshNI GGYRCC 2 cut(s) 268, 1487
BshTI ACCGGT 1 cut(s) 946
BsiEI CGRYCG 1 cut(s) 947
BsiSI CCGG 7 cut(s) 419, 461, 947, 1023, 1139, 1196, 1319
BslFI GGGAC 2 cut(s) 521, 710
BslI CCNNNNNNNGG 3 cut(s) 251, 912, 979
BsmAI GTCTC 3 cut(s) 50, 617, 1315
BsmFI GGGAC 2 cut(s) 521, 710
BsnI GGCC 4 cut(s) 862, 894, 1026, 1169
Bso31I GGTCTC 1 cut(s) 617
Bsp1286I GDGCHC 1 cut(s) 404
Bsp143I GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
BspANI GGCC 4 cut(s) 862, 894, 1026, 1169
BspCNI CTCAG 5 cut(s) 110, 265, 719, 1147, 1261
BspFNI CGCG 6 cut(s) 104, 554, 556, 681, 913, 1262
BspLI GGNNCC 6 cut(s) 270, 726, 792, 1137, 1191, 1489
BspMI ACCTGC 1 cut(s) 591
BspOI GCTAGC 1 cut(s) 1406
BspPI GGATC 3 cut(s) 213, 537, 866
BspT107I GGYRCC 2 cut(s) 268, 1487
BspTNI GGTCTC 1 cut(s) 617
BsrBI CCGCTC 2 cut(s) 589, 1166
BsrDI GCAATG 2 cut(s) 1121, 1237
BsrFI RCCGGY 3 cut(s) 946, 1022, 1138
BsrI ACTGG 5 cut(s) 339, 530, 585, 728, 1039
BssAI RCCGGY 3 cut(s) 946, 1022, 1138
BssECI CCNNGG 1 cut(s) 45
BssHII GCGCGC 1 cut(s) 679
BssMI GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
BssNI GRCGYC 1 cut(s) 68
Bst4CI ACNGT 8 cut(s) 46, 148, 169, 1102, 1132, 1183, 1417, 1460
Bst6I CTCTTC 1 cut(s) 278
BstACI GRCGYC 1 cut(s) 68
BstBAI YACGTR 1 cut(s) 890
BstC8I GCNNGC 6 cut(s) 598, 681, 1005, 1024, 1028, 1404
BstDEI CTNAG 7 cut(s) 97, 273, 511, 706, 1155, 1248, 1437
BstDSI CCRYGG 1 cut(s) 45
BstF5I GGATG 1 cut(s) 589
BstFNI CGCG 6 cut(s) 104, 554, 556, 681, 913, 1262
BstH2I RGCGCY 1 cut(s) 143
BstHHI GCGC 8 cut(s) 106, 142, 387, 487, 556, 681, 683, 1264
BstKTI GATC 8 cut(s) 208, 532, 643, 808, 874, 992, 1287, 1344
BstMAI GTCTC 3 cut(s) 50, 617, 1315
BstMBI GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
BstMCI CGRYCG 1 cut(s) 947
BstMWI GCNNNNNNNGC 4 cut(s) 47, 930, 1000, 1009
BstSCI CCNGG 3 cut(s) 418, 1195, 1317
BstSFI CTRYAG 1 cut(s) 144
BstUI CGCG 6 cut(s) 104, 554, 556, 681, 913, 1262
BstV1I GCAGC 3 cut(s) 394, 844, 945
BstV2I GAAGAC 2 cut(s) 189, 1281
BstXI CCANNNNNNTGG 1 cut(s) 1034
BsuRI GGCC 4 cut(s) 862, 894, 1026, 1169
BtgI CCRYGG 1 cut(s) 45
BtsCI GGATG 1 cut(s) 589
BtsIMutI CAGTG 5 cut(s) 332, 1137, 1152, 1179, 1422
BveI ACCTGC 1 cut(s) 591
Cac8I GCNNGC 6 cut(s) 598, 681, 1005, 1024, 1028, 1404
CfoI GCGC 8 cut(s) 106, 142, 387, 487, 556, 681, 683, 1264
Cfr10I RCCGGY 3 cut(s) 946, 1022, 1138
Cfr13I GGNCC 1 cut(s) 724
CseI GACGC 2 cut(s) 76, 945
Csp6I GTAC 4 cut(s) 567, 887, 1350, 1461
CspAI ACCGGT 1 cut(s) 946
CviAII CATG 5 cut(s) 155, 686, 968, 1046, 1227
CviQI GTAC 4 cut(s) 567, 887, 1350, 1461
DdeI CTNAG 7 cut(s) 97, 273, 511, 706, 1155, 1248, 1437
DpnI GATC 8 cut(s) 207, 531, 642, 807, 873, 991, 1286, 1343
DpnII GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
DraI TTTAAA 1 cut(s) 414
DriI GACNNNNNGTC 1 cut(s) 718
EaeI YGGCCR 2 cut(s) 892, 1024
Eam1104I CTCTTC 1 cut(s) 278
Eam1105I GACNNNNNGTC 1 cut(s) 718
EarI CTCTTC 1 cut(s) 278
Eco147I AGGCCT 1 cut(s) 862
Eco24I GRGCYC 1 cut(s) 404
Eco31I GGTCTC 1 cut(s) 617
Eco47I GGWCC 1 cut(s) 724
Eco57I CTGAAG 3 cut(s) 72, 983, 1275
EcoT38I GRGCYC 1 cut(s) 404
FaeI CATG 5 cut(s) 158, 689, 971, 1049, 1230
FalI AAGNNNNNCTT 2 cut(s) 332, 364
FaqI GGGAC 2 cut(s) 521, 710
FatI CATG 5 cut(s) 154, 685, 967, 1045, 1226
FauI CCCGC 1 cut(s) 549
FbaI TGATCA 2 cut(s) 805, 1341
Fnu4HI GCNGC 8 cut(s) 36, 39, 102, 383, 833, 959, 1119, 1167
FokI GGATG 1 cut(s) 596
FriOI GRGCYC 1 cut(s) 404
Fsp4HI GCNGC 8 cut(s) 36, 39, 102, 383, 833, 959, 1119, 1167
FspBI CTAG 4 cut(s) 113, 1244, 1296, 1403
FspI TGCGCA 1 cut(s) 486
GlaI GCGC 8 cut(s) 105, 141, 386, 486, 555, 680, 682, 1263
GluI GCNGC 8 cut(s) 36, 39, 102, 383, 833, 959, 1119, 1167
GsaI CCCAGC 2 cut(s) 140, 840
GsuI CTGGAG 1 cut(s) 1376
HaeII RGCGCY 1 cut(s) 143
HaeIII GGCC 4 cut(s) 862, 894, 1026, 1169
HapII CCGG 7 cut(s) 419, 461, 947, 1023, 1139, 1196, 1319
HgaI GACGC 2 cut(s) 76, 945
HhaI GCGC 8 cut(s) 106, 142, 387, 487, 556, 681, 683, 1264
Hin1I GRCGYC 1 cut(s) 68
Hin1II CATG 5 cut(s) 158, 689, 971, 1049, 1230
Hin6I GCGC 8 cut(s) 104, 140, 385, 485, 554, 679, 681, 1262
HinP1I GCGC 8 cut(s) 104, 140, 385, 485, 554, 679, 681, 1262
HincII GTYRAC 2 cut(s) 634, 712
HindII GTYRAC 2 cut(s) 634, 712
HindIII AAGCTT 1 cut(s) 819
HinfI GANTC 4 cut(s) 185, 423, 692, 719
HpaII CCGG 7 cut(s) 419, 461, 947, 1023, 1139, 1196, 1319
HphI GGTGA 6 cut(s) 65, 709, 827, 881, 1060, 1376
Hpy166II GTNNAC 3 cut(s) 634, 712, 929
Hpy188I TCNGA 5 cut(s) 66, 181, 1251, 1333, 1508
Hpy188III TCNNGA 4 cut(s) 229, 427, 942, 1432
Hpy8I GTNNAC 3 cut(s) 634, 712, 929
Hpy99I CGWCG 5 cut(s) 70, 230, 454, 939, 1102
HpyAV CCTTC 6 cut(s) 24, 259, 316, 781, 1007, 1355
HpyCH4III ACNGT 8 cut(s) 46, 148, 169, 1102, 1132, 1183, 1417, 1460
HpyCH4IV ACGT 5 cut(s) 80, 309, 636, 889, 1110
HpyCH4V TGCA 8 cut(s) 122, 154, 213, 382, 620, 777, 1126, 1230
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 930, 1000, 1009
HpyF3I CTNAG 7 cut(s) 97, 273, 511, 706, 1155, 1248, 1437
HpySE526I ACGT 5 cut(s) 80, 309, 636, 889, 1110
Hsp92I GRCGYC 1 cut(s) 68
Hsp92II CATG 5 cut(s) 158, 689, 971, 1049, 1230
HspAI GCGC 8 cut(s) 104, 140, 385, 485, 554, 679, 681, 1262
KroI GCCGGC 1 cut(s) 1022
KroNI GCCGGC 1 cut(s) 1024
Ksp22I TGATCA 2 cut(s) 805, 1341
Kzo9I GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
LmnI GCTCC 3 cut(s) 790, 1135, 1163
Lsp1109I GCAGC 3 cut(s) 394, 844, 945
LweI GCATC 2 cut(s) 249, 1105
MaeI CTAG 4 cut(s) 113, 1244, 1296, 1403
MaeII ACGT 5 cut(s) 80, 309, 636, 889, 1110
MaeIII GTNAC 2 cut(s) 758, 1039
MalI GATC 8 cut(s) 207, 531, 642, 807, 873, 991, 1286, 1343
MbiI CCGCTC 2 cut(s) 589, 1166
MboI GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
MboII GAAGA 5 cut(s) 9, 194, 295, 340, 1286
MfeI CAATTG 1 cut(s) 123
MhlI GDGCHC 1 cut(s) 404
MluCI AATT 7 cut(s) 123, 174, 219, 316, 359, 409, 1221
MlyI GAGTC 3 cut(s) 179, 701, 728
MmeI TCCRAC 3 cut(s) 89, 183, 1141
MroNI GCCGGC 1 cut(s) 1022
MroXI GAANNNNTTC 1 cut(s) 1221
MseI TTAA 5 cut(s) 408, 413, 434, 1064, 1268
MslI CAYNNNNRTG 2 cut(s) 1050, 1113
MspI CCGG 7 cut(s) 419, 461, 947, 1023, 1139, 1196, 1319
MspR9I CCNGG 3 cut(s) 420, 1197, 1319
MunI CAATTG 1 cut(s) 123
MvnI CGCG 6 cut(s) 104, 554, 556, 681, 913, 1262
MwoI GCNNNNNNNGC 4 cut(s) 47, 930, 1000, 1009
NaeI GCCGGC 1 cut(s) 1024
NciI CCSGG 3 cut(s) 420, 1197, 1319
NdeII GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
NgoMIV GCCGGC 1 cut(s) 1022
NheI GCTAGC 1 cut(s) 1402
NlaIII CATG 5 cut(s) 158, 689, 971, 1049, 1230
NlaIV GGNNCC 6 cut(s) 270, 726, 792, 1137, 1191, 1489
NmuCI GTSAC 1 cut(s) 758
NsbI TGCGCA 1 cut(s) 486
PauI GCGCGC 1 cut(s) 679
PceI AGGCCT 1 cut(s) 862
PdiI GCCGGC 1 cut(s) 1024
PdmI GAANNNNTTC 1 cut(s) 1221
PfeI GAWTC 1 cut(s) 423
PflMI CCANNNNNTGG 1 cut(s) 251
PfoI TCCNGGA 1 cut(s) 418
PinAI ACCGGT 1 cut(s) 946
PkrI GCNGC 8 cut(s) 37, 40, 103, 384, 834, 960, 1120, 1168
PleI GAGTC 3 cut(s) 179, 700, 727
PpsI GAGTC 3 cut(s) 179, 700, 727
Ppu21I YACGTR 1 cut(s) 890
Psp1406I AACGTT 2 cut(s) 80, 309
PspFI CCCAGC 2 cut(s) 136, 836
PspN4I GGNNCC 6 cut(s) 270, 726, 792, 1137, 1191, 1489
PspPI GGNCC 1 cut(s) 724
PteI GCGCGC 1 cut(s) 679
RsaI GTAC 4 cut(s) 568, 888, 1351, 1462
RsaNI GTAC 4 cut(s) 567, 887, 1350, 1461
RseI CAYNNNNRTG 2 cut(s) 1050, 1113
SaqAI TTAA 5 cut(s) 408, 413, 434, 1064, 1268
SatI GCNGC 8 cut(s) 36, 39, 102, 383, 833, 959, 1119, 1167
Sau3AI GATC 8 cut(s) 205, 529, 640, 805, 871, 989, 1284, 1341
Sau96I GGNCC 1 cut(s) 724
SchI GAGTC 3 cut(s) 179, 701, 728
ScrFI CCNGG 3 cut(s) 420, 1197, 1319
SduI GDGCHC 1 cut(s) 404
SfaNI GCATC 2 cut(s) 249, 1105
SfcI CTRYAG 1 cut(s) 144
SinI GGWCC 1 cut(s) 724
SmiI ATTTAAAT 1 cut(s) 414
SmiMI CAYNNNNRTG 2 cut(s) 1050, 1113
SmlI CTYRAG 1 cut(s) 427
SmoI CTYRAG 1 cut(s) 427
Sse9I AATT 7 cut(s) 123, 174, 219, 316, 359, 409, 1221
SseBI AGGCCT 1 cut(s) 862
SspMI CTAG 4 cut(s) 113, 1244, 1296, 1403
StuI AGGCCT 1 cut(s) 862
StyD4I CCNGG 3 cut(s) 418, 1195, 1317
SwaI ATTTAAAT 1 cut(s) 414
TaaI ACNGT 8 cut(s) 46, 148, 169, 1102, 1132, 1183, 1417, 1460
TaiI ACGT 5 cut(s) 83, 312, 639, 892, 1113
TaqI TCGA 2 cut(s) 1097, 1305
TaqII GACCGA 1 cut(s) 712
TasI AATT 7 cut(s) 123, 174, 219, 316, 359, 409, 1221
TatI WGTACW 1 cut(s) 1460
TauI GCSGC 5 cut(s) 38, 41, 104, 1121, 1169
TfiI GAWTC 1 cut(s) 423
Tru1I TTAA 5 cut(s) 408, 413, 434, 1064, 1268
Tru9I TTAA 5 cut(s) 408, 413, 434, 1064, 1268
TscAI CASTG 5 cut(s) 339, 1137, 1159, 1186, 1422
TseFI GTSAC 1 cut(s) 758
TseI GCWGC 3 cut(s) 382, 832, 958
Tsp45I GTSAC 1 cut(s) 758
TspDTI ATGAA 4 cut(s) 1062, 1193, 1360, 1412
TspRI CASTG 5 cut(s) 339, 1137, 1159, 1186, 1422
Van91I CCANNNNNTGG 1 cut(s) 251
VpaK11BI GGWCC 1 cut(s) 724
XapI RAATTY 2 cut(s) 174, 1221
XcmI CCANNNNNNNNNTGG 1 cut(s) 604
XmnI GAANNNNTTC 1 cut(s) 1221
XspI CTAG 4 cut(s) 113, 1244, 1296, 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.