Rorug02G0135100

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0017578
Physical Location & Seq
Forward (+)
11682427 .. 11686706
4280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0135100.1

Sequence Viewer

Length: 1506 bp
ATGATATCGGCAGTTTCCTGGGTGCCCAAAGGAGTTTCAAAGCCAGTCCCCGCAGTCGCTGAGCCGCCCACCCAAGAAGAAATCGATGAGTTAATAAAATCCGGTATCTTAGATAAAAGTGGAGATGGTGGTGGAAGCGATGACGATGATGAGGGAGAGATGGAGGTTGAAACCACCAGTGAGGGTGGTGAAGTCTCGCAGGCATTAGAGGTAGCGAAAGCACTTGGCAGAGCTTCCAAAGTGACCAAATCAGGGAGCAATTATGATGACATTACTGAGGGATTGAAGGAACTTGACATGGATAATTATGATGACGAGGATAATGATGGCATTGATCTGTTTAGTGGTGGGTATGGGGACCTTTACTACCCAAGTAATGATATGGATCCATATCTCAAGAAGGAGAAGGATGATGATGAGGATTCTGAAGATAGTGAGGACATGACCATCAACCCAAATGATGCAGTCATAGTTTGTGCTCGCAATGAGGATGATATCAGTCAGCTTGAGATTTGGCTGTATACTGAAACAGAAGATGGCGAACCAGATGTTTATGTTCACCATGACATCATCATTTCAGCATTTCCCCTTTGCACAGCATGGCTTGATTGTCCTCTCAAAGGTGGAGACAAAGGGAATTTTATAGCTGTTGGTTTGATGGGTGAACCTACCATTGAGATATGGGATCTTGACATCATTGATGAAGTACAACCATGTGTGGTCCTGGGTGGTATTGCAGAGAAGAAGAAAAAGAAAGGAAAAAAGACCTCAATCAAATACAAAGAAGACAGTCACACAGATTCTGTACTGGGGCTTGCTTGGAATAAGGAGTACAGAAATATACTGGCCAGTGCAAGTGCTGACAAACTAGTTAAAATTTGGGATGTGGCTACTGGAAAATGTAACATTACTATGGAGCATCATACAGACAAGGTTCAGGCGGTTGCATGGAATCATTTTGCCCCTCAAGTTCTTCTTAGTGGATCTTTTGATCATTCAATTGTCTTGAAAGATGGAAGGGTGCCAACTCATTCTGGTTATAAGTGGACAGTGACAGCTGATGTAGAAAGCTTAGCATGGGATCCACACACTGAGCATTCATTTGTGGTGAGTCTTGAAGATGGTACAGTCCAAGGTTTTGATATTCGGGCCGCCACTTCTGCTCCTACTTCTGAATCTAAACCCAGTTTTACTCTTCATGCACACGACAAAGCTGTTTGTGGATTATCCTATAATCCTTTGGCACCTAATCTTCTTGCAACTGGATCCACAGATAAAATGGTGAAGCTTTGGGATTTGTCAAATAATCAACCTTCATGCATTGCATCCATGAATCCTAAAGCAGGAGCTGTGTTTTCTATTTCTTTCTCACAAGATAACCCCTTTTTGCTGGCCATGGGAGGCTCGAAAGGGAAATTGGAAGTATGGGATACATCGTATGATGCTGCAGTTGCCCAGAGATTTGGGAGTTACATCAAGAAGAGCAGACCCCAGTCTGGGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Exo_endo_phos zf-C6H2

Protein Analysis

501

Amino Acids

54.5

Weight (kDa)

4.48

Isoelectric Point (pI)

31.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_CAF1B_HIR1 PF24105 223 - 320 3.9e-06 CAF1B/HIR1 beta-propeller domain
WD40_Prp19 PF24814 255 - 338 2.1e-08 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 256 - 485 2.1e-33 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 257 - 365 7.7e-15 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 263 - 338 3.8e-14 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 263 - 334 1e-10 WDR3 first beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 263 - 468 5.4e-12 MABP1/WDR62 second WD40 domain
WD40_Prp19 PF24814 265 - 477 2.2e-21 Prp19 WD40 domain
Beta-prop_Aladin PF25460 348 - 485 7.9e-06 Aladin seven-bladed propeller
WD40_WDHD1_1st PF24817 351 - 485 5.4e-08 WDHD1 first WD40 domain
Beta-prop_WDR3_1st PF25173 352 - 480 8.3e-11 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 352 - 483 1.8e-17 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 353 - 480 5.6e-12 WDR5 beta-propeller domain
Beta-prop_EIPR1 PF23609 355 - 431 8.4e-09 EIPR1 beta-propeller
Beta-prop_TEP1_2nd PF25047 355 - 480 3.2e-07 TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 369 - 478 8.1e-07 WDR36/Utp21 first beta-propeller
WD40 PF00400 394 - 432 4.9e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017578)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16490
rosa_chinensis RchiOBHm_Chr2g0106371 RchiOBHm_Chr2g0106391
rosa_laevigata RLG00000017493 RLG00000017495
rosa_roxburghii Rroxscaffold_2G00137230
rosa_rugosa Rorug02G0135100
rosa_samantha Rh2AG186200 Rh2AG186300 Rh2CG191200 Rh2DG192300 Rh2DG192400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1041
AccB1I GGYRCC 3 cut(s) 22, 1021, 1243
AccI GTMKAC 1 cut(s) 521
AciI CCGC 4 cut(s) 51, 65, 941, 1152
AclWI GGATC 8 cut(s) 380, 393, 693, 991, 1076, 1089, 1260, 1273
AcoI YGGCCR 2 cut(s) 846, 1392
AcsI RAATTY 2 cut(s) 637, 876
AcuI CTGAAG 1 cut(s) 447
AfaI GTAC 4 cut(s) 708, 807, 833, 1126
AfiI CCNNNNNNNGG 6 cut(s) 252, 620, 1343, 1496, 1497, 1498
AgsI TTSAA 6 cut(s) 39, 170, 286, 999, 1009, 1118
AhlI ACTAGT 1 cut(s) 868
AjnI CCWGG 2 cut(s) 17, 723
AjuI GAANNNNNNNTTGG 2 cut(s) 1400, 1432
AluBI AGCT 8 cut(s) 233, 505, 647, 1058, 1071, 1214, 1288, 1349
AluI AGCT 8 cut(s) 233, 505, 647, 1058, 1071, 1214, 1288, 1349
Alw21I GWGCWC 1 cut(s) 481
Alw26I GTCTC 2 cut(s) 199, 621
AlwI GGATC 8 cut(s) 380, 393, 693, 991, 1076, 1089, 1260, 1273
AlwNI CAGNNNCTG 3 cut(s) 59, 803, 1349
AoxI GGCC 3 cut(s) 846, 1149, 1392
ApeKI GCWGC 1 cut(s) 1445
ApoI RAATTY 2 cut(s) 637, 876
AspS9I GGNCC 3 cut(s) 358, 721, 1149
AsuHPI GGTGA 5 cut(s) 200, 551, 674, 1120, 1294
AvaII GGWCC 2 cut(s) 358, 721
BaeGI GKGCMC 1 cut(s) 27
BalI TGGCCA 2 cut(s) 848, 1394
BamHI GGATCC 3 cut(s) 385, 1081, 1265
BanI GGYRCC 3 cut(s) 22, 1021, 1243
BbsI GAAGAC 1 cut(s) 792
Bbv12I GWGCWC 1 cut(s) 481
BbvI GCAGC 1 cut(s) 1432
BccI CCATC 8 cut(s) 119, 154, 320, 455, 530, 652, 1007, 1115
BciT130I CCWGG 2 cut(s) 19, 725
BciVI GTATCC 1 cut(s) 1423
BclI TGATCA 1 cut(s) 991
BcoDI GTCTC 2 cut(s) 199, 621
BcuI ACTAGT 1 cut(s) 868
BfaI CTAG 1 cut(s) 869
BfmI CTRYAG 1 cut(s) 1446
BfuI GTATCC 1 cut(s) 1423
BisI GCNGC 3 cut(s) 65, 1152, 1446
BlpI GCTNAGC 2 cut(s) 60, 1072
BlsI GCNGC 3 cut(s) 66, 1153, 1447
Bme1390I CCNGG 2 cut(s) 19, 725
Bme18I GGWCC 2 cut(s) 358, 721
BmgT120I GGNCC 3 cut(s) 358, 721, 1149
BmiI GGNNCC 7 cut(s) 24, 359, 387, 1023, 1083, 1245, 1267
BmrFI CCNGG 2 cut(s) 19, 725
BmrI ACTGGG 3 cut(s) 818, 1179, 1486
BmsI GCATC 4 cut(s) 451, 928, 1334, 1432
BmuI ACTGGG 3 cut(s) 818, 1179, 1486
BoxI GACNNNNGTC 1 cut(s) 1492
BpiI GAAGAC 1 cut(s) 792
Bpu1102I GCTNAGC 2 cut(s) 60, 1072
BpuEI CTTGAG 3 cut(s) 380, 527, 951
Bsa29I ATCGAT 1 cut(s) 84
BsaBI GATNNNNATC 2 cut(s) 384, 390
BsaJI CCNNGG 4 cut(s) 18, 724, 1132, 1395
BsaWI WCCGGW 1 cut(s) 101
BsaXI ACNNNNNCTCC 2 cut(s) 1147, 1177
Bsc4I CCNNNNNNNGG 6 cut(s) 252, 620, 1343, 1496, 1497, 1498
Bse1I ACTGG 9 cut(s) 44, 177, 813, 849, 849, 898, 1185, 1267, 1492
Bse3DI GCAATG 2 cut(s) 490, 1320
Bse8I GATNNNNATC 2 cut(s) 384, 390
BseBI CCWGG 2 cut(s) 19, 725
BseCI ATCGAT 1 cut(s) 84
BseDI CCNNGG 4 cut(s) 18, 724, 1132, 1395
BseGI GGATG 4 cut(s) 415, 496, 889, 1325
BseJI GATNNNNATC 2 cut(s) 384, 390
BseLI CCNNNNNNNGG 6 cut(s) 252, 620, 1343, 1496, 1497, 1498
BseMI GCAATG 2 cut(s) 490, 1320
BseMII CTCAG 3 cut(s) 51, 267, 1083
BseNI ACTGG 9 cut(s) 44, 177, 813, 849, 849, 898, 1185, 1267, 1492
BseSI GKGCMC 1 cut(s) 27
BseXI GCAGC 1 cut(s) 1432
BshFI GGCC 3 cut(s) 848, 1151, 1394
BshNI GGYRCC 3 cut(s) 22, 1021, 1243
BshVI ATCGAT 1 cut(s) 84
BsiHKAI GWGCWC 1 cut(s) 481
BsiSI CCGG 1 cut(s) 102
BslFI GGGAC 2 cut(s) 32, 371
BslI CCNNNNNNNGG 6 cut(s) 252, 620, 1343, 1496, 1497, 1498
BsmAI GTCTC 2 cut(s) 199, 621
BsmFI GGGAC 2 cut(s) 32, 371
BsmI GAATGC 1 cut(s) 1096
BsnI GGCC 3 cut(s) 848, 1151, 1394
Bsp1286I GDGCHC 2 cut(s) 27, 481
Bsp143I GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
Bsp1720I GCTNAGC 2 cut(s) 60, 1072
Bsp19I CCATGG 1 cut(s) 1395
BspACI CCGC 4 cut(s) 51, 65, 941, 1152
BspANI GGCC 3 cut(s) 848, 1151, 1394
BspCNI CTCAG 3 cut(s) 52, 268, 1084
BspDI ATCGAT 1 cut(s) 84
BspLI GGNNCC 7 cut(s) 24, 359, 387, 1023, 1083, 1245, 1267
BspMAI CTGCAG 1 cut(s) 1450
BspPI GGATC 8 cut(s) 380, 393, 693, 991, 1076, 1089, 1260, 1273
BspQI GCTCTTC 1 cut(s) 1475
BspT107I GGYRCC 3 cut(s) 22, 1021, 1243
BsrDI GCAATG 2 cut(s) 490, 1320
BsrI ACTGG 9 cut(s) 44, 177, 813, 849, 849, 898, 1185, 1267, 1492
BssECI CCNNGG 4 cut(s) 18, 724, 1132, 1395
BssMI GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
BssNAI GTATAC 1 cut(s) 522
BssT1I CCWWGG 2 cut(s) 1132, 1395
Bst1107I GTATAC 1 cut(s) 522
Bst2UI CCWGG 2 cut(s) 19, 725
Bst4CI ACNGT 3 cut(s) 791, 1051, 1129
Bst6I CTCTTC 2 cut(s) 1200, 1475
BstC8I GCNNGC 4 cut(s) 201, 481, 816, 1392
BstDEI CTNAG 6 cut(s) 60, 109, 276, 977, 1072, 1092
BstDSI CCRYGG 1 cut(s) 1395
BstENI CCTNNNNNAGG 2 cut(s) 618, 1341
BstF5I GGATG 4 cut(s) 415, 496, 889, 1325
BstKTI GATC 7 cut(s) 337, 388, 688, 986, 994, 1084, 1268
BstMAI GTCTC 2 cut(s) 199, 621
BstMBI GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
BstMWI GCNNNNNNNGC 2 cut(s) 1160, 1451
BstNI CCWGG 2 cut(s) 19, 725
BstPAI GACNNNNGTC 1 cut(s) 1492
BstSCI CCNGG 2 cut(s) 17, 723
BstSFI CTRYAG 1 cut(s) 1446
BstSLI GKGCMC 1 cut(s) 27
BstV1I GCAGC 1 cut(s) 1432
BstV2I GAAGAC 1 cut(s) 792
BstX2I RGATCY 5 cut(s) 385, 685, 983, 1081, 1265
BstXI CCANNNNNNTGG 1 cut(s) 1463
BstYI RGATCY 5 cut(s) 385, 685, 983, 1081, 1265
BstZ17I GTATAC 1 cut(s) 522
Bsu15I ATCGAT 1 cut(s) 84
BsuI GTATCC 1 cut(s) 1423
BsuRI GGCC 3 cut(s) 848, 1151, 1394
BsuTUI ATCGAT 1 cut(s) 84
BtgI CCRYGG 1 cut(s) 1395
BtgZI GCGATG 1 cut(s) 153
BtsCI GGATG 4 cut(s) 415, 496, 889, 1325
BtsIMutI CAGTG 4 cut(s) 184, 856, 1056, 1089
Cac8I GCNNGC 4 cut(s) 201, 481, 816, 1392
CaiI CAGNNNCTG 3 cut(s) 59, 803, 1349
Cfr13I GGNCC 3 cut(s) 358, 721, 1149
ClaI ATCGAT 1 cut(s) 84
Csp6I GTAC 4 cut(s) 707, 806, 832, 1125
CviQI GTAC 4 cut(s) 707, 806, 832, 1125
DdeI CTNAG 6 cut(s) 60, 109, 276, 977, 1072, 1092
DpnI GATC 7 cut(s) 336, 387, 687, 985, 993, 1083, 1267
DpnII GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
EaeI YGGCCR 2 cut(s) 846, 1392
Eam1104I CTCTTC 2 cut(s) 1200, 1475
EarI CTCTTC 2 cut(s) 1200, 1475
Eco130I CCWWGG 2 cut(s) 1132, 1395
Eco32I GATATC 2 cut(s) 6, 496
Eco47I GGWCC 2 cut(s) 358, 721
Eco57I CTGAAG 1 cut(s) 447
EcoNI CCTNNNNNAGG 2 cut(s) 618, 1341
EcoO109I RGGNCCY 1 cut(s) 358
EcoRII CCWGG 2 cut(s) 17, 723
EcoRV GATATC 2 cut(s) 6, 496
EcoT14I CCWWGG 2 cut(s) 1132, 1395
EcoT22I ATGCAT 1 cut(s) 1322
ErhI CCWWGG 2 cut(s) 1132, 1395
FalI AAGNNNNNCTT 2 cut(s) 960, 992
FaqI GGGAC 2 cut(s) 32, 371
FauI CCCGC 1 cut(s) 58
FbaI TGATCA 1 cut(s) 991
FblI GTMKAC 1 cut(s) 521
Fnu4HI GCNGC 3 cut(s) 65, 1152, 1446
FokI GGATG 4 cut(s) 422, 503, 896, 1312
Fsp4HI GCNGC 3 cut(s) 65, 1152, 1446
FspBI CTAG 1 cut(s) 869
GluI GCNGC 3 cut(s) 65, 1152, 1446
HaeIII GGCC 3 cut(s) 848, 1151, 1394
HapII CCGG 1 cut(s) 102
HindIII AAGCTT 2 cut(s) 1069, 1286
HinfI GANTC 6 cut(s) 422, 800, 952, 1111, 1175, 1333
HpaII CCGG 1 cut(s) 102
HphI GGTGA 5 cut(s) 200, 551, 674, 1120, 1294
Hpy166II GTNNAC 4 cut(s) 522, 559, 665, 1047
Hpy188I TCNGA 2 cut(s) 427, 1174
Hpy188III TCNNGA 5 cut(s) 397, 689, 1006, 1115, 1477
Hpy8I GTNNAC 4 cut(s) 522, 559, 665, 1047
HpyAV CCTTC 5 cut(s) 280, 394, 400, 1011, 1323
HpyCH4III ACNGT 3 cut(s) 791, 1051, 1129
HpyF10VI GCNNNNNNNGC 2 cut(s) 1160, 1451
HpyF3I CTNAG 6 cut(s) 60, 109, 276, 977, 1072, 1092
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
LguI GCTCTTC 1 cut(s) 1475
LmnI GCTCC 4 cut(s) 255, 916, 1168, 1346
Lsp1109I GCAGC 1 cut(s) 1432
LweI GCATC 4 cut(s) 451, 928, 1334, 1432
MaeI CTAG 1 cut(s) 869
MaeIII GTNAC 5 cut(s) 241, 791, 902, 1051, 1469
MalI GATC 7 cut(s) 336, 387, 687, 985, 993, 1083, 1267
MboI GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
MfeI CAATTG 1 cut(s) 999
MflI RGATCY 5 cut(s) 385, 685, 983, 1081, 1265
MhlI GDGCHC 2 cut(s) 27, 481
MlsI TGGCCA 2 cut(s) 848, 1394
MluCI AATT 6 cut(s) 259, 304, 637, 876, 999, 1415
MluNI TGGCCA 2 cut(s) 848, 1394
MlyI GAGTC 1 cut(s) 1120
Mox20I TGGCCA 2 cut(s) 848, 1394
Mph1103I ATGCAT 1 cut(s) 1322
MscI TGGCCA 2 cut(s) 848, 1394
MseI TTAA 2 cut(s) 92, 873
MslI CAYNNNNRTG 1 cut(s) 911
Msp20I TGGCCA 2 cut(s) 848, 1394
MspA1I CMGCKG 1 cut(s) 1058
MspI CCGG 1 cut(s) 102
MspR9I CCNGG 2 cut(s) 19, 725
MunI CAATTG 1 cut(s) 999
Mva1269I GAATGC 1 cut(s) 1096
MvaI CCWGG 2 cut(s) 19, 725
MwoI GCNNNNNNNGC 2 cut(s) 1160, 1451
NcoI CCATGG 1 cut(s) 1395
NdeII GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
NlaIV GGNNCC 7 cut(s) 24, 359, 387, 1023, 1083, 1245, 1267
NmuCI GTSAC 3 cut(s) 241, 791, 1051
NsiI ATGCAT 1 cut(s) 1322
PciSI GCTCTTC 1 cut(s) 1475
PctI GAATGC 1 cut(s) 1096
PfeI GAWTC 5 cut(s) 422, 800, 952, 1175, 1333
PkrI GCNGC 3 cut(s) 66, 1153, 1447
PleI GAGTC 1 cut(s) 1119
PpsI GAGTC 1 cut(s) 1119
PpuMI RGGWCCY 1 cut(s) 358
PshAI GACNNNNGTC 1 cut(s) 1492
PsiI TTATAA 1 cut(s) 1041
Psp5II RGGWCCY 1 cut(s) 358
Psp6I CCWGG 2 cut(s) 17, 723
PspGI CCWGG 2 cut(s) 17, 723
PspN4I GGNNCC 7 cut(s) 24, 359, 387, 1023, 1083, 1245, 1267
PspPI GGNCC 3 cut(s) 358, 721, 1149
PspPPI RGGWCCY 1 cut(s) 358
PstI CTGCAG 1 cut(s) 1450
PstNI CAGNNNCTG 3 cut(s) 59, 803, 1349
PsuI RGATCY 5 cut(s) 385, 685, 983, 1081, 1265
PvuII CAGCTG 1 cut(s) 1058
RsaI GTAC 4 cut(s) 708, 807, 833, 1126
RsaNI GTAC 4 cut(s) 707, 806, 832, 1125
RseI CAYNNNNRTG 1 cut(s) 911
SapI GCTCTTC 1 cut(s) 1475
SaqAI TTAA 2 cut(s) 92, 873
SatI GCNGC 3 cut(s) 65, 1152, 1446
Sau3AI GATC 7 cut(s) 334, 385, 685, 983, 991, 1081, 1265
Sau96I GGNCC 3 cut(s) 358, 721, 1149
SchI GAGTC 1 cut(s) 1120
ScrFI CCNGG 2 cut(s) 19, 725
SduI GDGCHC 2 cut(s) 27, 481
SfaNI GCATC 4 cut(s) 451, 928, 1334, 1432
SfcI CTRYAG 1 cut(s) 1446
SinI GGWCC 2 cut(s) 358, 721
SmiMI CAYNNNNRTG 1 cut(s) 911
SmlI CTYRAG 3 cut(s) 395, 506, 966
SmoI CTYRAG 3 cut(s) 395, 506, 966
SpeI ACTAGT 1 cut(s) 868
Sse9I AATT 6 cut(s) 259, 304, 637, 876, 999, 1415
SsiI CCGC 4 cut(s) 51, 65, 941, 1152
SspMI CTAG 1 cut(s) 869
StyD4I CCNGG 2 cut(s) 17, 723
StyI CCWWGG 2 cut(s) 1132, 1395
TaaI ACNGT 3 cut(s) 791, 1051, 1129
TaqI TCGA 2 cut(s) 84, 1406
TasI AATT 6 cut(s) 259, 304, 637, 876, 999, 1415
TatI WGTACW 3 cut(s) 706, 805, 831
TauI GCSGC 2 cut(s) 67, 1154
TfiI GAWTC 5 cut(s) 422, 800, 952, 1175, 1333
Tru1I TTAA 2 cut(s) 92, 873
Tru9I TTAA 2 cut(s) 92, 873
TscAI CASTG 4 cut(s) 184, 856, 1056, 1096
TseFI GTSAC 3 cut(s) 241, 791, 1051
TseI GCWGC 1 cut(s) 1445
Tsp45I GTSAC 3 cut(s) 241, 791, 1051
TspDTI ATGAA 5 cut(s) 717, 1089, 1187, 1305, 1346
TspRI CASTG 4 cut(s) 184, 856, 1056, 1096
VpaK11BI GGWCC 2 cut(s) 358, 721
XagI CCTNNNNNAGG 2 cut(s) 618, 1341
XapI RAATTY 2 cut(s) 637, 876
XcmI CCANNNNNNNNNTGG 1 cut(s) 1276
XmiI GTMKAC 1 cut(s) 521
XspI CTAG 1 cut(s) 869
Zsp2I ATGCAT 1 cut(s) 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.