Rorug02G0137000

Microtubule-associated protein RP EB family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0015182
Physical Location & Seq
Forward (+)
12068710 .. 12079524
10815 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0137000.1

Sequence Viewer

Length: 1413 bp
ATGTATCCTATCGATTTCAAAGACATGCCCACCTCGGCTTCGTCCTTGTTCTCGGCCTATGCCTCAATGGCGGCATTCATCATGTTGGTCCGCTCCATGGTGGACCAACTCCTTCCTCCTGAGTTGCGTTCATATATTTACTCATTTATTCACCAATTCTTCTACACCCCTCGATCGTTGGACATGACAATTATTATTGATGAGAAGTGTGGCTACATCAACAATCAAGTTTATGAAGCAGCGGAAGTCTACCTCCAGACCAAGCTAAGTGATTCGAATGAGCGTCTCCGAGTGACCAAAACACCAGGGCAGAAGAGTCTCAACATTGCCGTTGACAAAGACCAAGAAATCATCGATTTCTTCGATGGCGTTAAGCTTCGGTGGCATTTTGTGTGCGCTGAAGACAAGAATAGTGGTTCTGGTGGTGATGATGAAAAGCGTAAGTTTGAGCTGATTTTTCTGTTAAAGCACAGGACCAAGGTGATAGATTCGTACCTGTCACATGTGTTGGCTCGGGCTAATGCGATTAGAGAAGAGGAAAAGGTTCTTAAGCTTGATTCCCAGCTGACCCAGCATTCGGGTTCAGTAGATCTGGAGCACCCATCAACTTTCGACACATTAGCTATGGACCCCGAGCTTAAGAGGACGATTATCGAGGATTTGGATAGGTTTGTGAGGAGGAAGGACTTCTATAGGAAGGTTGGCAAGGCTTGGAAAAGAGGGTATTTGTTGTATGGTCCACCTGGTACTGGCAAATCAAGCTTGATTGCAGCCATGGCTAATTATCTCAAGTTTGATGTGTATGATTTGGAGCTTACTAGTGTTTATAACAACTCGGAATTGAGGAGGATAATGCTGTCTACCTCAAATCGTTCTATTTTGGTCATTGAGGATATTGATTGCACTGTGGACATACAAAATAGGGAATCTGAGGAGGATAATAGTGAACAATCTAACACCAGGGTAACGCTCTCAGGCCTATTGAACTTCATAGATGGTCTGTGGTCGAGCTGTGGTGACGAGAGAATTATTGTGTTCACCACCAACAACAAGGATAAATTAGACCCTGCATTGCTGCGTCCTGGTCGAATGGACGTGCACATTCACATGTCCTATTGCACCCCGAGCGGGTTCAGGGTCTTAGCCTCTAACTACCTTGGAATTCATGAAAGTAACCCTCATCGTCTTTGTGGAGAAATTGAAGGTTTGATAGAAAGCACTGAGGTTACCCCTGCAGAAATTGCTGAGGAGCTTATGAAGAGTGATGATGTTCATGTTGCTCTTGAAGGACTCGTCAATTTCCTCAAAAGAAAGAAATCCGAGAGGAGTAAAATAAACGATGAGGGGAGTCGGGGGACTAACAACATTGAAATTGAAGAAACAAATGAAGATGCAGAGAGAAAACAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000079 GO:0001932 GO:0001934 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005819 GO:0005856 GO:0006355 GO:0006996 GO:0007010 GO:0008017 GO:0008022 GO:0008092 GO:0008104 GO:0008150 GO:0009524 GO:0009605 GO:0009606 GO:0009612 GO:0009628 GO:0009652 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0015630 GO:0015631 GO:0016043 GO:0019219 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0030312 GO:0030496 GO:0030865 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0033036 GO:0033674 GO:0042325 GO:0042327 GO:0042802 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043549 GO:0044093 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045737 GO:0045787 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0048471 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071840 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:1904029 GO:1904031 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CH EB1

Protein Analysis

470

Amino Acids

53.65

Weight (kDa)

5.29

Isoelectric Point (pI)

50.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 38 - 132 5.5e-24 Domain associated at C-terminal with AAA
AAA PF00004 242 - 371 5.1e-22 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 373 - 442 4.4e-22 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G67270
fragaria_vesca FvH4_1g16740
malus_domestica MD02G1178500.v1.1 MD15G1288400.v1.1
prunus_persica Prupe.6G229300_v2.0.a1
pyrus_communis pycom02g14460
rosa_chinensis RchiOBHm_Chr2g0106641
rosa_laevigata RLG00000017525
rosa_multiflora Rmu_sc0006221.1_g000003
rosa_roxburghii Rroxscaffold_2G00136930
rosa_rugosa Rorug02G0137000
rosa_samantha Rh2AG188400 Rh2BG199400 Rh2CG193400 Rh2DG194600
rosa_wichuraiana Rw2G014790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 828
AccBSI CCGCTC 2 cut(s) 93, 1128
AccI GTMKAC 2 cut(s) 249, 860
AciI CCGC 4 cut(s) 71, 91, 242, 1128
AcsI RAATTY 1 cut(s) 1161
AcuI CTGAAG 1 cut(s) 420
AfaI GTAC 2 cut(s) 494, 748
AfiI CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
AflII CTTAAG 2 cut(s) 548, 638
AflIII ACRYGT 2 cut(s) 502, 1107
AgsI TTSAA 6 cut(s) 19, 985, 1202, 1286, 1370, 1376
AhlI ACTAGT 1 cut(s) 818
AjiI CACGTC 1 cut(s) 1096
AjnI CCWGG 4 cut(s) 304, 742, 959, 1081
Alw21I GWGCWC 2 cut(s) 600, 1101
Alw26I GTCTC 2 cut(s) 290, 323
Alw44I GTGCAC 1 cut(s) 1097
Ama87I CYCGRG 3 cut(s) 513, 632, 1123
AoxI GGCC 2 cut(s) 54, 976
ApaLI GTGCAC 1 cut(s) 1097
ApeKI GCWGC 3 cut(s) 239, 770, 1075
ApoI RAATTY 1 cut(s) 1161
ArsI GACNNNNNNTTYG 2 cut(s) 559, 591
Asp700I GAANNNNTTC 2 cut(s) 543, 686
AspLEI GCGC 1 cut(s) 398
AspS9I GGNCC 5 cut(s) 88, 103, 474, 628, 737
AsuHPI GGTGA 5 cut(s) 143, 437, 493, 1028, 1030
AsuII TTCGAA 1 cut(s) 275
AvaI CYCGRG 3 cut(s) 513, 632, 1123
AvaII GGWCC 5 cut(s) 88, 103, 474, 628, 737
BaeGI GKGCMC 1 cut(s) 1101
BarI GAAGNNNNNNTAC 2 cut(s) 197, 229
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 2 cut(s) 600, 1101
BbvCI CCTCAGC 1 cut(s) 1245
BbvI GCAGC 3 cut(s) 251, 782, 1062
BccI CCATC 3 cut(s) 359, 610, 989
BceAI ACGGC 1 cut(s) 314
BciT130I CCWGG 4 cut(s) 306, 744, 961, 1083
BciVI GTATCC 1 cut(s) 15
BcoDI GTCTC 2 cut(s) 290, 323
BcuI ACTAGT 1 cut(s) 818
BfaI CTAG 1 cut(s) 819
BfmI CTRYAG 2 cut(s) 691, 1233
BfrI CTTAAG 2 cut(s) 548, 638
BfuI GTATCC 1 cut(s) 15
BglI GCCNNNNNGGC 1 cut(s) 68
BglII AGATCT 1 cut(s) 589
BisI GCNGC 4 cut(s) 72, 240, 771, 1076
BlsI GCNGC 4 cut(s) 73, 241, 772, 1077
Bme1390I CCNGG 4 cut(s) 306, 744, 961, 1083
Bme18I GGWCC 5 cut(s) 88, 103, 474, 628, 737
BmeT110I CYCGRG 3 cut(s) 513, 632, 1123
BmgBI CACGTC 1 cut(s) 1096
BmgT120I GGNCC 5 cut(s) 88, 103, 474, 628, 737
BmiI GGNNCC 1 cut(s) 630
BmrFI CCNGG 4 cut(s) 306, 744, 961, 1083
BmsI GCATC 1 cut(s) 1381
BpiI GAAGAC 1 cut(s) 408
BpmI CTGGAG 2 cut(s) 239, 614
Bpu10I CCTNAGC 1 cut(s) 1245
Bpu14I TTCGAA 1 cut(s) 275
BpuEI CTTGAG 1 cut(s) 773
Bsa29I ATCGAT 2 cut(s) 12, 354
BsaJI CCNNGG 7 cut(s) 33, 96, 305, 477, 774, 960, 1156
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
Bse1I ACTGG 1 cut(s) 754
Bse3DI GCAATG 2 cut(s) 324, 1070
BseBI CCWGG 4 cut(s) 306, 744, 961, 1083
BseCI ATCGAT 2 cut(s) 12, 354
BseDI CCNNGG 7 cut(s) 33, 96, 305, 477, 774, 960, 1156
BseLI CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
BseMI GCAATG 2 cut(s) 324, 1070
BseMII CTCAG 5 cut(s) 111, 921, 987, 1212, 1236
BseNI ACTGG 1 cut(s) 754
BseRI GAGGAG 5 cut(s) 691, 859, 947, 1262, 1339
BseSI GKGCMC 1 cut(s) 1101
BseXI GCAGC 3 cut(s) 251, 782, 1062
BseYI CCCAGC 2 cut(s) 561, 570
Bsh1285I CGRYCG 1 cut(s) 176
BshFI GGCC 2 cut(s) 56, 978
BshVI ATCGAT 2 cut(s) 12, 354
BsiEI CGRYCG 1 cut(s) 176
BsiHKAI GWGCWC 2 cut(s) 600, 1101
BsiHKCI CYCGRG 3 cut(s) 513, 632, 1123
BslFI GGGAC 1 cut(s) 1369
BslI CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
BsmAI GTCTC 2 cut(s) 290, 323
BsmBI CGTCTC 1 cut(s) 290
BsmFI GGGAC 1 cut(s) 1369
BsmI GAATGC 2 cut(s) 74, 574
BsnI GGCC 2 cut(s) 56, 978
BsoBI CYCGRG 3 cut(s) 513, 632, 1123
Bsp119I TTCGAA 1 cut(s) 275
Bsp1286I GDGCHC 2 cut(s) 600, 1101
Bsp143I GATC 2 cut(s) 173, 589
Bsp19I CCATGG 2 cut(s) 96, 774
BspACI CCGC 4 cut(s) 71, 91, 242, 1128
BspANI GGCC 2 cut(s) 56, 978
BspCNI CTCAG 5 cut(s) 112, 922, 986, 1213, 1237
BspDI ATCGAT 2 cut(s) 12, 354
BspHI TCATGA 1 cut(s) 1165
BspLI GGNNCC 1 cut(s) 630
BspMAI CTGCAG 1 cut(s) 1237
BspT104I TTCGAA 1 cut(s) 275
BspTI CTTAAG 2 cut(s) 548, 638
BsrBI CCGCTC 2 cut(s) 93, 1128
BsrDI GCAATG 2 cut(s) 324, 1070
BsrI ACTGG 1 cut(s) 754
BssECI CCNNGG 7 cut(s) 33, 96, 305, 477, 774, 960, 1156
BssMI GATC 2 cut(s) 173, 589
BssT1I CCWWGG 4 cut(s) 96, 477, 774, 1156
Bst2UI CCWGG 4 cut(s) 306, 744, 961, 1083
Bst4CI ACNGT 1 cut(s) 907
Bst6I CTCTTC 3 cut(s) 308, 528, 1253
BstAFI CTTAAG 2 cut(s) 548, 638
BstAPI GCANNNNNTGC 1 cut(s) 1241
BstBI TTCGAA 1 cut(s) 275
BstDEI CTNAG 7 cut(s) 120, 266, 930, 973, 1141, 1221, 1245
BstDSI CCRYGG 2 cut(s) 96, 774
BstEII GGTNACC 1 cut(s) 1225
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 2 cut(s) 176, 592
BstMAI GTCTC 2 cut(s) 290, 323
BstMBI GATC 2 cut(s) 173, 589
BstMCI CGRYCG 1 cut(s) 176
BstMWI GCNNNNNNNGC 7 cut(s) 68, 382, 571, 759, 776, 1125, 1241
BstNI CCWGG 4 cut(s) 306, 744, 961, 1083
BstNSI RCATGY 3 cut(s) 28, 506, 1111
BstPI GGTNACC 1 cut(s) 1225
BstSCI CCNGG 4 cut(s) 304, 742, 959, 1081
BstSFI CTRYAG 2 cut(s) 691, 1233
BstSLI GKGCMC 1 cut(s) 1101
BstV1I GCAGC 3 cut(s) 251, 782, 1062
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 589
BstYI RGATCY 1 cut(s) 589
Bsu15I ATCGAT 2 cut(s) 12, 354
BsuI GTATCC 1 cut(s) 15
BsuRI GGCC 2 cut(s) 56, 978
BsuTUI ATCGAT 2 cut(s) 12, 354
BtgI CCRYGG 2 cut(s) 96, 774
BtrI CACGTC 1 cut(s) 1096
BtsIMutI CAGTG 2 cut(s) 903, 1218
CciI TCATGA 1 cut(s) 1165
CfoI GCGC 1 cut(s) 398
Cfr13I GGNCC 5 cut(s) 88, 103, 474, 628, 737
ClaI ATCGAT 2 cut(s) 12, 354
CseI GACGC 2 cut(s) 272, 1067
CsiI ACCWGGT 1 cut(s) 742
Csp6I GTAC 2 cut(s) 493, 747
CspCI CAANNNNNGTGG 2 cut(s) 394, 429
CviAII CATG 9 cut(s) 25, 82, 97, 184, 503, 775, 1108, 1166, 1274
CviQI GTAC 2 cut(s) 493, 747
DdeI CTNAG 7 cut(s) 120, 266, 930, 973, 1141, 1221, 1245
DpnI GATC 2 cut(s) 175, 591
DpnII GATC 2 cut(s) 173, 589
Eam1104I CTCTTC 3 cut(s) 308, 528, 1253
EarI CTCTTC 3 cut(s) 308, 528, 1253
Eco130I CCWWGG 4 cut(s) 96, 477, 774, 1156
Eco147I AGGCCT 1 cut(s) 978
Eco47I GGWCC 5 cut(s) 88, 103, 474, 628, 737
Eco57I CTGAAG 1 cut(s) 420
Eco88I CYCGRG 3 cut(s) 513, 632, 1123
Eco91I GGTNACC 1 cut(s) 1225
EcoO65I GGTNACC 1 cut(s) 1225
EcoRI GAATTC 1 cut(s) 1161
EcoRII CCWGG 4 cut(s) 304, 742, 959, 1081
EcoT14I CCWWGG 4 cut(s) 96, 477, 774, 1156
ErhI CCWWGG 4 cut(s) 96, 477, 774, 1156
Esp3I CGTCTC 1 cut(s) 290
FaeI CATG 9 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169, 1277
FaqI GGGAC 1 cut(s) 1369
FatI CATG 9 cut(s) 24, 81, 96, 183, 502, 774, 1107, 1165, 1273
FauI CCCGC 1 cut(s) 1121
FblI GTMKAC 2 cut(s) 249, 860
Fnu4HI GCNGC 4 cut(s) 72, 240, 771, 1076
Fsp4HI GCNGC 4 cut(s) 72, 240, 771, 1076
FspBI CTAG 1 cut(s) 819
GlaI GCGC 1 cut(s) 397
GluI GCNGC 4 cut(s) 72, 240, 771, 1076
GsaI CCCAGC 2 cut(s) 565, 574
GsuI CTGGAG 2 cut(s) 239, 614
HaeIII GGCC 2 cut(s) 56, 978
HgaI GACGC 2 cut(s) 272, 1067
HhaI GCGC 1 cut(s) 398
Hin1II CATG 9 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169, 1277
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HincII GTYRAC 1 cut(s) 334
HindII GTYRAC 1 cut(s) 334
HindIII AAGCTT 3 cut(s) 374, 551, 760
HinfI GANTC 7 cut(s) 272, 316, 488, 557, 926, 1290, 1348
HphI GGTGA 5 cut(s) 143, 437, 493, 1028, 1030
Hpy166II GTNNAC 9 cut(s) 103, 250, 334, 740, 861, 910, 947, 1038, 1099
Hpy188I TCNGA 4 cut(s) 290, 838, 931, 1321
Hpy188III TCNNGA 5 cut(s) 119, 256, 593, 1166, 1283
Hpy8I GTNNAC 9 cut(s) 103, 250, 334, 740, 861, 910, 947, 1038, 1099
HpyAV CCTTC 5 cut(s) 122, 676, 691, 1196, 1280
HpyCH4III ACNGT 1 cut(s) 907
HpyCH4IV ACGT 1 cut(s) 1095
HpyCH4V TGCA 7 cut(s) 770, 903, 1070, 1099, 1119, 1235, 1394
HpyF10VI GCNNNNNNNGC 7 cut(s) 68, 382, 571, 759, 776, 1125, 1241
HpyF3I CTNAG 7 cut(s) 120, 266, 930, 973, 1141, 1221, 1245
HpySE526I ACGT 1 cut(s) 1095
Hsp92II CATG 9 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169, 1277
HspAI GCGC 1 cut(s) 396
Kzo9I GATC 2 cut(s) 173, 589
LmnI GCTCC 4 cut(s) 98, 595, 811, 1249
Lsp1109I GCAGC 3 cut(s) 251, 782, 1062
LweI GCATC 1 cut(s) 1381
MabI ACCWGGT 1 cut(s) 742
MaeI CTAG 1 cut(s) 819
MaeII ACGT 1 cut(s) 1095
MaeIII GTNAC 6 cut(s) 292, 498, 964, 1016, 1172, 1225
MalI GATC 2 cut(s) 175, 591
MbiI CCGCTC 2 cut(s) 93, 1128
MboI GATC 2 cut(s) 173, 589
MboII GAAGA 8 cut(s) 151, 325, 352, 413, 545, 1270, 1388, 1400
MflI RGATCY 1 cut(s) 589
MhlI GDGCHC 2 cut(s) 600, 1101
MlyI GAGTC 3 cut(s) 325, 1284, 1357
MmeI TCCRAC 1 cut(s) 159
MroXI GAANNNNTTC 2 cut(s) 543, 686
MseI TTAA 4 cut(s) 372, 464, 549, 639
MslI CAYNNNNRTG 1 cut(s) 1106
MspA1I CMGCKG 2 cut(s) 242, 565
MspCI CTTAAG 2 cut(s) 548, 638
MspR9I CCNGG 4 cut(s) 306, 744, 961, 1083
Mva1269I GAATGC 2 cut(s) 74, 574
MvaI CCWGG 4 cut(s) 306, 744, 961, 1083
MwoI GCNNNNNNNGC 7 cut(s) 68, 382, 571, 759, 776, 1125, 1241
NcoI CCATGG 2 cut(s) 96, 774
NdeII GATC 2 cut(s) 173, 589
NlaIII CATG 9 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169, 1277
NlaIV GGNNCC 1 cut(s) 630
NmeAIII GCCGAG 2 cut(s) 14, 32
NmuCI GTSAC 3 cut(s) 292, 498, 1016
NspI RCATGY 3 cut(s) 28, 506, 1111
NspV TTCGAA 1 cut(s) 275
PagI TCATGA 1 cut(s) 1165
PceI AGGCCT 1 cut(s) 978
PciI ACATGT 2 cut(s) 502, 1107
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PctI GAATGC 2 cut(s) 74, 574
PdmI GAANNNNTTC 2 cut(s) 543, 686
PfeI GAWTC 4 cut(s) 272, 488, 557, 926
PkrI GCNGC 4 cut(s) 73, 241, 772, 1077
Ple19I CGATCG 1 cut(s) 176
PleI GAGTC 3 cut(s) 324, 1284, 1356
PpsI GAGTC 3 cut(s) 324, 1284, 1356
PscI ACATGT 2 cut(s) 502, 1107
PsiI TTATAA 1 cut(s) 828
Psp6I CCWGG 4 cut(s) 304, 742, 959, 1081
PspEI GGTNACC 1 cut(s) 1225
PspFI CCCAGC 2 cut(s) 561, 570
PspGI CCWGG 4 cut(s) 304, 742, 959, 1081
PspN4I GGNNCC 1 cut(s) 630
PspPI GGNCC 5 cut(s) 88, 103, 474, 628, 737
PstI CTGCAG 1 cut(s) 1237
PsuI RGATCY 1 cut(s) 589
PvuI CGATCG 1 cut(s) 176
PvuII CAGCTG 1 cut(s) 565
RsaI GTAC 2 cut(s) 494, 748
RsaNI GTAC 2 cut(s) 493, 747
RseI CAYNNNNRTG 1 cut(s) 1106
SaqAI TTAA 4 cut(s) 372, 464, 549, 639
SatI GCNGC 4 cut(s) 72, 240, 771, 1076
Sau3AI GATC 2 cut(s) 173, 589
Sau96I GGNCC 5 cut(s) 88, 103, 474, 628, 737
SchI GAGTC 3 cut(s) 325, 1284, 1357
ScrFI CCNGG 4 cut(s) 306, 744, 961, 1083
SduI GDGCHC 2 cut(s) 600, 1101
SexAI ACCWGGT 1 cut(s) 742
SfaNI GCATC 1 cut(s) 1381
SfcI CTRYAG 2 cut(s) 691, 1233
SfuI TTCGAA 1 cut(s) 275
SinI GGWCC 5 cut(s) 88, 103, 474, 628, 737
SmiMI CAYNNNNRTG 1 cut(s) 1106
SmlI CTYRAG 3 cut(s) 548, 638, 788
SmoI CTYRAG 3 cut(s) 548, 638, 788
SpeI ACTAGT 1 cut(s) 818
SseBI AGGCCT 1 cut(s) 978
SsiI CCGC 4 cut(s) 71, 91, 242, 1128
SspMI CTAG 1 cut(s) 819
StuI AGGCCT 1 cut(s) 978
StyD4I CCNGG 4 cut(s) 304, 742, 959, 1081
StyI CCWWGG 4 cut(s) 96, 477, 774, 1156
TaaI ACNGT 1 cut(s) 907
TaiI ACGT 1 cut(s) 1098
TaqI TCGA 9 cut(s) 12, 172, 275, 354, 363, 612, 654, 1007, 1087
TauI GCSGC 1 cut(s) 74
TfiI GAWTC 4 cut(s) 272, 488, 557, 926
Tru1I TTAA 4 cut(s) 372, 464, 549, 639
Tru9I TTAA 4 cut(s) 372, 464, 549, 639
TscAI CASTG 2 cut(s) 910, 1225
TseFI GTSAC 3 cut(s) 292, 498, 1016
TseI GCWGC 3 cut(s) 239, 770, 1075
Tsp45I GTSAC 3 cut(s) 292, 498, 1016
TspRI CASTG 2 cut(s) 910, 1225
Vha464I CTTAAG 2 cut(s) 548, 638
VneI GTGCAC 1 cut(s) 1097
VpaK11BI GGWCC 5 cut(s) 88, 103, 474, 628, 737
XapI RAATTY 1 cut(s) 1161
XceI RCATGY 3 cut(s) 28, 506, 1111
XmiI GTMKAC 2 cut(s) 249, 860
XmnI GAANNNNTTC 2 cut(s) 543, 686
XspI CTAG 1 cut(s) 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.