Rorug02G0324800

LURP-one-related 12-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0014447
Physical Location & Seq
Reverse (-)
39796882 .. 39801858
4977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0324800.1

Sequence Viewer

Length: 2337 bp
ATGCCGCCGGCGACGGAGGAACCTAACACGACGACGACGACGACGATGATGATCGACGAGATTTATGAGTTCTCGGCCCCGCGCTTCTTCGATTTCATCAAGGACGAGACCGACGATGAAAAGATCAACGCCGAGCTCTGGTTCGACTCCGCCACAGCCTACGCCCCTTCCCCCTTCATGCCTAGAATCAAGACTGGTAGATCCTTTACAGTAGAGAGCATGTGCGACTTTACTGAAGCAGAAAATATGCAGAAGAACCTTGAATCATCCTCAGCTGATGATGATTCTACGGAAACCAAGACTGAGTCGAAGATCAGTCCTGAATTGAAGGAAGAAACAATTCCCAGGGAGGCTAAACAAGAAAACAGTGCAAGACAAGCCAATATGATTTCTGCTGATAAAGTAGAGGAAAAATGTACTATAGATGATGGAAGTGTTTTGGCCACTGCAGTATCTTTGAATAAGAGAACTGATATGACAAATGAGAAGGAGAATAGTAATTCCGTAGCTTGTACTCCAAAACCACCCATGAATTATTCCAAGAAGGGAGATCTTCTGAGTGATTCCAAAAAGCACCAGACAGCTAAAAAGATATCAAGTATGGTTAGAAACCCATCAGGGCTAAGGGGAAAAAGTCACTTGCACTCTTCACAAACTAAGAATGTCAAACCGTATACTATGAAAAGAGAAGAAAATGTGAAAAATATAACTGGCACACCCATGTTAGCTCAGGAGAATCAGGCAATTAAGCGGCAGAAGTTGGATGGAGGGAGATCTAGACAGATTCTTAATCCCAAACCCCAAACATTGCCCCACAAGTCAAAATTGGGTTATACCAGTGGCATGCATTCTTCAACTGCTGTTAAAACTCAAAAAGAGGACAGAAAGATGTATGTTCGGGAACAAGCAGCACCCTTTGTTTCAATGGCAGAAATGATGAACAGGTTCCAATCAAGTACCAGAGACTTGTCACTGCCACACAGTTCTCGTTCACATATGAAGCCCAAACTCACCTTAACGAGGCCAAAGGAGCCTGAATTTGAAACATCCCAGCGTGTCCGCTCAGTAAGAGTAAAGAGTACTGCCGAGCTTGAAGAAGAGATGATGGCCAAAATTCCAAAGTTTAAGGCTCGACCTGTAAACAAAAAGATTCTTGAAGCGCCATCATTACCTGCAATGCCAAGAAGTACACCACAGCCACCTGAGTTTCAGGAATTCCATTTAGAGACTATGGCAAGGGCCCATCAAAATGCAGAAACATCCTCAGTAGCTTCAACTGATGTATCACGACAGAACAAACAATCGAAGCCCCATCATCTTACTGAACCTAAAACTCCAACGTTACATACATTATTGAGGGCCCGTCCACCCAGGGTGAAAACTTCATTGGAAATTGAGCAGGAAGAACTTGAAAAGATCCCAAAATTCAAAGCGAAGCCTCTGAATAAGAAGATATTTGAAAGTAAAGGAGATCTCGGGATGTTCTGTAATGCCAAGAAACATGTGACTAAACCTCAGGAATTTCACTTTGCAACAAATGAAAGAATACCACCACCACCACCTTCAGCCATTCATGATCTATTTGATAAGTTGTCTTTGAACTCAGAGCCCCACCAGAATCCAATTCCAAGAAACACAATGCCAAATCCATTCCATCTCCATACAGAGGAAAGAGGAGCTGAGAAAGAAAAGAAATTTTTTACTGAAGTTATGCAGAAACAATTGGAAGAAGAAAGAGCTAGGGTTCCCAAAGCTAATCCATATCCTTATACCACTGATTACCCTGTGATCCCACCAAAGCCAGAGCCCAAGGAATGCACAAAACCGGAACCTTTCCAACTAGAGAGCTTAGCGAGGCATGAGGAGGAAATGCAAAGGGAAATGGAAGAAAGACAGAGGATAGAGATGGAAGAAGCTCAGATGAGGGTTTTCAAGGCACAACCAATCTTGAAAGAGGACCCAATTCCAGTTCCCGAGAGAGTTCGCAAGCCTCTAACAGAAGTTCAAGAATTCAATCTGAATGTTAATAATCGGGCAGTGCACAGAGCAGAATTTGATCACAAGGTTAAGGAGAAAGAGATAATATATAAGAGATATAGAGAAGAGAGTGAAGCAGCAAGGATGTTAGAGGAAGAGAAAGCATTGAAACAACTGAGAAGGACGCTGGTACCCCATGCAAGGCCAGTGCCTAATTTTGAGCATCCATTCTGCCCCCAGAAGTGTCCAAGGGAAACAACAAAAGCAAAGTCACCAAATCTGCGAGTTCTACAGCGGCAAGAAAGGCGAAGGATGATGATCAAATCCGCCACTTCCAGCGCTGCTGCCCAGATGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LOR

Protein Analysis

778

Amino Acids

89.49

Weight (kDa)

9.26

Isoelectric Point (pI)

60.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPX2_importin PF12214 338 - 434 2.1e-31 Cell cycle regulated microtubule associated protein
TPX2_importin PF12214 439 - 516 8.5e-18 Cell cycle regulated microtubule associated protein
TPX2 PF06886 671 - 746 8.3e-21 Targeting protein for Xklp2 (TPX2) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80120 AT3G15810
fragaria_vesca FvH4_6g29760
malus_domestica MD17G1211400.v1.1
prunus_persica Prupe.3G086900_v2.0.a1 Prupe.3G087000_v2.0.a1
pyrus_communis pycom17g21620
rosa_chinensis RchiOBHm_Chr2g0135471
rosa_laevigata RLG00000019467
rosa_multiflora Rmu_sc0008725.1_g000007
rosa_roxburghii Rroxscaffold_2G00109220
rosa_rugosa Rorug02G0324800
rosa_samantha Rh2AG376200 Rh2BG382300 Rh2CG361000 Rh2DG398700
rosa_wichuraiana Rw2G030690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1180
Acc65I GGTACC 1 cut(s) 2167
AccB1I GGYRCC 1 cut(s) 2167
AccBSI CCGCTC 1 cut(s) 1062
AccI GTMKAC 1 cut(s) 674
AccII CGCG 1 cut(s) 82
AciI CCGC 7 cut(s) 5, 80, 150, 751, 1060, 2272, 2304
AclI AACGTT 1 cut(s) 1340
AclWI GGATC 3 cut(s) 195, 1411, 1783
AcoI YGGCCR 2 cut(s) 441, 1107
AcsI RAATTY 8 cut(s) 1037, 1113, 1214, 1424, 1520, 1694, 2009, 2051
AcuI CTGAAG 3 cut(s) 255, 1548, 1725
AfaI GTAC 6 cut(s) 418, 514, 958, 1081, 1189, 2169
AfeI AGCGCT 1 cut(s) 2317
AfiI CCNNNNNNNGG 4 cut(s) 138, 1020, 1666, 2178
AflIII ACRYGT 1 cut(s) 1501
AjnI CCWGG 2 cut(s) 344, 1370
AjuI GAANNNNNNNTTGG 2 cut(s) 1370, 1402
Alw21I GWGCWC 2 cut(s) 138, 2043
Alw26I GTCTC 3 cut(s) 101, 957, 1220
Alw44I GTGCAC 1 cut(s) 2039
AlwI GGATC 3 cut(s) 195, 1411, 1783
Ama87I CYCGRG 2 cut(s) 1475, 1973
Aor51HI AGCGCT 1 cut(s) 2317
AoxI GGCC 7 cut(s) 75, 441, 1022, 1107, 1239, 1359, 2180
ApaI GGGCCC 2 cut(s) 1243, 1363
ApaLI GTGCAC 1 cut(s) 2039
ApeKI GCWGC 4 cut(s) 908, 2114, 2318, 2321
ApoI RAATTY 8 cut(s) 1037, 1113, 1214, 1424, 1520, 1694, 2009, 2051
ArsI GACNNNNNNTTYG 2 cut(s) 2231, 2263
Asp700I GAANNNNTTC 2 cut(s) 339, 944
Asp718I GGTACC 1 cut(s) 2167
AspLEI GCGC 3 cut(s) 84, 1162, 2318
AspS9I GGNCC 6 cut(s) 76, 1239, 1240, 1359, 1360, 1957
AsuHPI GGTGA 3 cut(s) 1003, 1387, 2241
AvaI CYCGRG 2 cut(s) 1475, 1973
AvaII GGWCC 1 cut(s) 1957
AxyI CCTNAGG 1 cut(s) 1515
BaeGI GKGCMC 3 cut(s) 1243, 1363, 2043
BaeI ACNNNNGTAYC 6 cut(s) 435, 468, 1266, 1299, 2151, 2184
BalI TGGCCA 2 cut(s) 443, 1109
BanI GGYRCC 1 cut(s) 2167
BanII GRGCYC 5 cut(s) 138, 1243, 1363, 1611, 1809
Bbv12I GWGCWC 2 cut(s) 138, 2043
BbvCI CCTCAGC 1 cut(s) 271
BbvI GCAGC 4 cut(s) 920, 2126, 2305, 2308
BccI CCATC 9 cut(s) 422, 622, 758, 1099, 1171, 1251, 1320, 1662, 1900
BciT130I CCWGG 2 cut(s) 346, 1372
BclI TGATCA 2 cut(s) 2056, 2295
BcoDI GTCTC 3 cut(s) 101, 957, 1220
BfaI CTAG 4 cut(s) 183, 777, 1740, 1841
BfmI CTRYAG 3 cut(s) 420, 447, 2267
BfoI RGCGCY 2 cut(s) 1163, 2319
BfuAI ACCTGC 1 cut(s) 1180
BglII AGATCT 3 cut(s) 550, 773, 1471
BisI GCNGC 7 cut(s) 5, 752, 909, 2115, 2273, 2319, 2322
BlpI GCTNAGC 1 cut(s) 1849
BlsI GCNGC 7 cut(s) 6, 753, 910, 2116, 2274, 2320, 2323
BmcAI AGTACT 1 cut(s) 1081
Bme1390I CCNGG 2 cut(s) 346, 1372
Bme18I GGWCC 1 cut(s) 1957
BmeT110I CYCGRG 2 cut(s) 1475, 1973
BmgT120I GGNCC 6 cut(s) 76, 1239, 1240, 1359, 1360, 1957
BmrFI CCNGG 2 cut(s) 346, 1372
BmsI GCATC 1 cut(s) 2209
Bpu10I CCTNAGC 3 cut(s) 271, 623, 729
Bpu1102I GCTNAGC 1 cut(s) 1849
BsaBI GATNNNNATC 2 cut(s) 50, 2294
BsaI GGTCTC 1 cut(s) 101
BsaJI CCNNGG 6 cut(s) 344, 345, 1370, 1371, 1809, 2225
BsaWI WCCGGW 1 cut(s) 1825
Bsc4I CCNNNNNNNGG 4 cut(s) 138, 1020, 1666, 2178
Bse118I RCCGGY 1 cut(s) 7
Bse1I ACTGG 5 cut(s) 199, 715, 837, 1967, 2183
Bse21I CCTNAGG 1 cut(s) 1515
Bse3DI GCAATG 2 cut(s) 806, 1182
Bse8I GATNNNNATC 2 cut(s) 50, 2294
BseBI CCWGG 2 cut(s) 346, 1372
BseDI CCNNGG 6 cut(s) 344, 345, 1370, 1371, 1809, 2225
BseGI GGATG 8 cut(s) 266, 769, 1046, 1259, 1485, 2127, 2200, 2295
BseJI GATNNNNATC 2 cut(s) 50, 2294
BseLI CCNNNNNNNGG 4 cut(s) 138, 1020, 1666, 2178
BseMI GCAATG 2 cut(s) 806, 1182
BseNI ACTGG 5 cut(s) 199, 715, 837, 1967, 2183
BseRI GAGGAG 2 cut(s) 1689, 1877
BseSI GKGCMC 3 cut(s) 1243, 1363, 2043
BseXI GCAGC 4 cut(s) 920, 2126, 2305, 2308
BseYI CCCAGC 1 cut(s) 1050
Bsh1236I CGCG 1 cut(s) 82
BshFI GGCC 7 cut(s) 77, 443, 1024, 1109, 1241, 1361, 2182
BshNI GGYRCC 1 cut(s) 2167
BsiHKAI GWGCWC 2 cut(s) 138, 2043
BsiHKCI CYCGRG 2 cut(s) 1475, 1973
BsiSI CCGG 2 cut(s) 8, 1826
BslI CCNNNNNNNGG 4 cut(s) 138, 1020, 1666, 2178
BsmAI GTCTC 3 cut(s) 101, 957, 1220
BsmI GAATGC 2 cut(s) 847, 1820
BsnI GGCC 7 cut(s) 77, 443, 1024, 1109, 1241, 1361, 2182
Bso31I GGTCTC 1 cut(s) 101
BsoBI CYCGRG 2 cut(s) 1475, 1973
Bsp120I GGGCCC 2 cut(s) 1239, 1359
Bsp1286I GDGCHC 6 cut(s) 138, 1243, 1363, 1611, 1809, 2043
Bsp1720I GCTNAGC 1 cut(s) 1849
BspACI CCGC 7 cut(s) 5, 80, 150, 751, 1060, 2272, 2304
BspANI GGCC 7 cut(s) 77, 443, 1024, 1109, 1241, 1361, 2182
BspFNI CGCG 1 cut(s) 82
BspHI TCATGA 1 cut(s) 1573
BspMAI CTGCAG 1 cut(s) 451
BspMI ACCTGC 1 cut(s) 1180
BspPI GGATC 3 cut(s) 195, 1411, 1783
BspT107I GGYRCC 1 cut(s) 2167
BspTNI GGTCTC 1 cut(s) 101
BsrBI CCGCTC 1 cut(s) 1062
BsrDI GCAATG 2 cut(s) 806, 1182
BsrFI RCCGGY 1 cut(s) 7
BsrI ACTGG 5 cut(s) 199, 715, 837, 1967, 2183
BssAI RCCGGY 1 cut(s) 7
BssECI CCNNGG 6 cut(s) 344, 345, 1370, 1371, 1809, 2225
BssNAI GTATAC 1 cut(s) 675
BssT1I CCWWGG 2 cut(s) 1809, 2225
Bst1107I GTATAC 1 cut(s) 675
Bst2UI CCWGG 2 cut(s) 346, 1372
Bst4CI ACNGT 4 cut(s) 211, 368, 672, 983
Bst6I CTCTTC 4 cut(s) 652, 1092, 2097, 2127
BstC8I GCNNGC 3 cut(s) 9, 845, 1988
BstENI CCTNNNNNAGG 1 cut(s) 1018
BstF5I GGATG 8 cut(s) 266, 769, 1046, 1259, 1485, 2127, 2200, 2295
BstFNI CGCG 1 cut(s) 82
BstH2I RGCGCY 2 cut(s) 1163, 2319
BstHHI GCGC 3 cut(s) 84, 1162, 2318
BstMAI GTCTC 3 cut(s) 101, 957, 1220
BstMWI GCNNNNNNNGC 3 cut(s) 377, 1030, 2281
BstNI CCWGG 2 cut(s) 346, 1372
BstNSI RCATGY 3 cut(s) 223, 847, 1505
BstSCI CCNGG 2 cut(s) 344, 1370
BstSFI CTRYAG 3 cut(s) 420, 447, 2267
BstSLI GKGCMC 3 cut(s) 1243, 1363, 2043
BstUI CGCG 1 cut(s) 82
BstV1I GCAGC 4 cut(s) 920, 2126, 2305, 2308
BstX2I RGATCY 5 cut(s) 200, 550, 773, 1416, 1471
BstYI RGATCY 5 cut(s) 200, 550, 773, 1416, 1471
BstZ17I GTATAC 1 cut(s) 675
Bsu36I CCTNAGG 1 cut(s) 1515
BsuRI GGCC 7 cut(s) 77, 443, 1024, 1109, 1241, 1361, 2182
BtsCI GGATG 8 cut(s) 266, 769, 1046, 1259, 1485, 2127, 2200, 2295
BtsI GCAGTG 3 cut(s) 444, 971, 2043
BtsIMutI CAGTG 7 cut(s) 373, 444, 844, 971, 1773, 2043, 2190
BveI ACCTGC 1 cut(s) 1180
Cac8I GCNNGC 3 cut(s) 9, 845, 1988
CciI TCATGA 1 cut(s) 1573
CfoI GCGC 3 cut(s) 84, 1162, 2318
Cfr10I RCCGGY 1 cut(s) 7
Cfr13I GGNCC 6 cut(s) 76, 1239, 1240, 1359, 1360, 1957
CseI GACGC 1 cut(s) 2170
Csp6I GTAC 6 cut(s) 417, 513, 957, 1080, 1188, 2168
CviAII CATG 9 cut(s) 178, 220, 529, 721, 844, 1502, 1574, 1859, 2174
CviQI GTAC 6 cut(s) 417, 513, 957, 1080, 1188, 2168
EaeI YGGCCR 2 cut(s) 441, 1107
Eam1104I CTCTTC 4 cut(s) 652, 1092, 2097, 2127
EarI CTCTTC 4 cut(s) 652, 1092, 2097, 2127
EciI GGCGGA 2 cut(s) 139, 2293
Ecl136II GAGCTC 1 cut(s) 136
Eco130I CCWWGG 2 cut(s) 1809, 2225
Eco24I GRGCYC 5 cut(s) 138, 1243, 1363, 1611, 1809
Eco31I GGTCTC 1 cut(s) 101
Eco32I GATATC 1 cut(s) 594
Eco47I GGWCC 1 cut(s) 1957
Eco47III AGCGCT 1 cut(s) 2317
Eco53kI GAGCTC 1 cut(s) 136
Eco57I CTGAAG 3 cut(s) 255, 1548, 1725
Eco81I CCTNAGG 1 cut(s) 1515
Eco88I CYCGRG 2 cut(s) 1475, 1973
EcoICRI GAGCTC 1 cut(s) 136
EcoNI CCTNNNNNAGG 1 cut(s) 1018
EcoO109I RGGNCCY 3 cut(s) 1239, 1359, 1957
EcoRI GAATTC 2 cut(s) 1214, 2009
EcoRII CCWGG 2 cut(s) 344, 1370
EcoRV GATATC 1 cut(s) 594
EcoT14I CCWWGG 2 cut(s) 1809, 2225
EcoT22I ATGCAT 1 cut(s) 849
EcoT38I GRGCYC 5 cut(s) 138, 1243, 1363, 1611, 1809
ErhI CCWWGG 2 cut(s) 1809, 2225
FaeI CATG 9 cut(s) 181, 223, 532, 724, 847, 1505, 1577, 1862, 2177
FatI CATG 9 cut(s) 177, 219, 528, 720, 843, 1501, 1573, 1858, 2173
FauI CCCGC 1 cut(s) 87
FauNDI CATATG 1 cut(s) 996
FbaI TGATCA 2 cut(s) 2056, 2295
FblI GTMKAC 1 cut(s) 674
Fnu4HI GCNGC 7 cut(s) 5, 752, 909, 2115, 2273, 2319, 2322
FokI GGATG 8 cut(s) 253, 776, 1033, 1246, 1492, 2134, 2187, 2302
FriOI GRGCYC 5 cut(s) 138, 1243, 1363, 1611, 1809
Fsp4HI GCNGC 7 cut(s) 5, 752, 909, 2115, 2273, 2319, 2322
FspBI CTAG 4 cut(s) 183, 777, 1740, 1841
GlaI GCGC 3 cut(s) 83, 1161, 2317
GluI GCNGC 7 cut(s) 5, 752, 909, 2115, 2273, 2319, 2322
GsaI CCCAGC 1 cut(s) 1054
HaeII RGCGCY 2 cut(s) 1163, 2319
HaeIII GGCC 7 cut(s) 77, 443, 1024, 1109, 1241, 1361, 2182
HapII CCGG 2 cut(s) 8, 1826
HgaI GACGC 1 cut(s) 2170
HhaI GCGC 3 cut(s) 84, 1162, 2318
Hin1II CATG 9 cut(s) 181, 223, 532, 724, 847, 1505, 1577, 1862, 2177
Hin6I GCGC 3 cut(s) 82, 1160, 2316
HinP1I GCGC 3 cut(s) 82, 1160, 2316
HpaII CCGG 2 cut(s) 8, 1826
HphI GGTGA 3 cut(s) 1003, 1387, 2241
Hpy166II GTNNAC 6 cut(s) 675, 992, 1141, 1190, 1367, 2041
Hpy188I TCNGA 5 cut(s) 558, 1443, 1606, 1920, 2019
Hpy8I GTNNAC 6 cut(s) 675, 992, 1141, 1190, 1367, 2041
Hpy99I CGWCG 8 cut(s) 16, 34, 37, 40, 43, 46, 59, 116
HpyAV CCTTC 8 cut(s) 177, 184, 322, 481, 538, 1572, 2151, 2280
HpyCH4III ACNGT 4 cut(s) 211, 368, 672, 983
HpyCH4IV ACGT 1 cut(s) 1340
HpyF10VI GCNNNNNNNGC 3 cut(s) 377, 1030, 2281
HpySE526I ACGT 1 cut(s) 1340
Hsp92II CATG 9 cut(s) 181, 223, 532, 724, 847, 1505, 1577, 1862, 2177
HspAI GCGC 3 cut(s) 82, 1160, 2316
KpnI GGTACC 1 cut(s) 2171
KroI GCCGGC 1 cut(s) 7
KroNI GCCGGC 1 cut(s) 9
Ksp22I TGATCA 2 cut(s) 2056, 2295
LmnI GCTCC 2 cut(s) 1030, 1676
Lsp1109I GCAGC 4 cut(s) 920, 2126, 2305, 2308
LweI GCATC 1 cut(s) 2209
MaeI CTAG 4 cut(s) 183, 777, 1740, 1841
MaeII ACGT 1 cut(s) 1340
MaeIII GTNAC 5 cut(s) 635, 969, 1341, 1504, 2247
MbiI CCGCTC 1 cut(s) 1062
MfeI CAATTG 1 cut(s) 1721
MflI RGATCY 5 cut(s) 200, 550, 773, 1416, 1471
MhlI GDGCHC 6 cut(s) 138, 1243, 1363, 1611, 1809, 2043
MlsI TGGCCA 2 cut(s) 443, 1109
MluNI TGGCCA 2 cut(s) 443, 1109
MlyI GAGTC 2 cut(s) 140, 314
MmeI TCCRAC 3 cut(s) 741, 1361, 1861
Mox20I TGGCCA 2 cut(s) 443, 1109
Mph1103I ATGCAT 1 cut(s) 849
MreI CGCCGGCG 1 cut(s) 7
MroNI GCCGGC 1 cut(s) 7
MroXI GAANNNNTTC 2 cut(s) 339, 944
MscI TGGCCA 2 cut(s) 443, 1109
MseI TTAA 7 cut(s) 747, 789, 864, 1016, 1125, 2025, 2067
MslI CAYNNNNRTG 2 cut(s) 719, 1248
Msp20I TGGCCA 2 cut(s) 443, 1109
MspA1I CMGCKG 2 cut(s) 275, 2272
MspI CCGG 2 cut(s) 8, 1826
MspR9I CCNGG 2 cut(s) 346, 1372
MunI CAATTG 1 cut(s) 1721
Mva1269I GAATGC 2 cut(s) 847, 1820
MvaI CCWGG 2 cut(s) 346, 1372
MvnI CGCG 1 cut(s) 82
MwoI GCNNNNNNNGC 3 cut(s) 377, 1030, 2281
NaeI GCCGGC 1 cut(s) 9
NdeI CATATG 1 cut(s) 996
NgoMIV GCCGGC 1 cut(s) 7
NlaIII CATG 9 cut(s) 181, 223, 532, 724, 847, 1505, 1577, 1862, 2177
NmeAIII GCCGAG 3 cut(s) 53, 157, 1111
NmuCI GTSAC 4 cut(s) 635, 969, 1504, 2247
NsiI ATGCAT 1 cut(s) 849
NspI RCATGY 3 cut(s) 223, 847, 1505
PaeI GCATGC 1 cut(s) 847
PagI TCATGA 1 cut(s) 1573
PasI CCCWGGG 2 cut(s) 345, 1371
PciI ACATGT 1 cut(s) 1501
PcsI WCGNNNNNNNCGW 4 cut(s) 35, 38, 41, 111
PctI GAATGC 2 cut(s) 847, 1820
PdiI GCCGGC 1 cut(s) 9
PdmI GAANNNNTTC 2 cut(s) 339, 944
PfeI GAWTC 8 cut(s) 186, 263, 284, 563, 736, 784, 1150, 1618
PflFI GACNNNGTC 1 cut(s) 304
PkrI GCNGC 7 cut(s) 6, 753, 910, 2116, 2274, 2320, 2323
PleI GAGTC 2 cut(s) 140, 313
PpsI GAGTC 2 cut(s) 140, 313
PpuMI RGGWCCY 1 cut(s) 1957
PscI ACATGT 1 cut(s) 1501
Psp124BI GAGCTC 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 1340
Psp5II RGGWCCY 1 cut(s) 1957
Psp6I CCWGG 2 cut(s) 344, 1370
PspFI CCCAGC 1 cut(s) 1050
PspGI CCWGG 2 cut(s) 344, 1370
PspOMI GGGCCC 2 cut(s) 1239, 1359
PspPI GGNCC 6 cut(s) 76, 1239, 1240, 1359, 1360, 1957
PspPPI RGGWCCY 1 cut(s) 1957
PstI CTGCAG 1 cut(s) 451
PsuI RGATCY 5 cut(s) 200, 550, 773, 1416, 1471
PsyI GACNNNGTC 1 cut(s) 304
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 6 cut(s) 418, 514, 958, 1081, 1189, 2169
RsaNI GTAC 6 cut(s) 417, 513, 957, 1080, 1188, 2168
RseI CAYNNNNRTG 2 cut(s) 719, 1248
SacI GAGCTC 1 cut(s) 138
SaqAI TTAA 7 cut(s) 747, 789, 864, 1016, 1125, 2025, 2067
SatI GCNGC 7 cut(s) 5, 752, 909, 2115, 2273, 2319, 2322
Sau96I GGNCC 6 cut(s) 76, 1239, 1240, 1359, 1360, 1957
ScaI AGTACT 1 cut(s) 1081
SchI GAGTC 2 cut(s) 140, 314
ScrFI CCNGG 2 cut(s) 346, 1372
SduI GDGCHC 6 cut(s) 138, 1243, 1363, 1611, 1809, 2043
SfaNI GCATC 1 cut(s) 2209
SfcI CTRYAG 3 cut(s) 420, 447, 2267
SgrAI CRCCGGYG 1 cut(s) 7
SinI GGWCC 1 cut(s) 1957
SmiMI CAYNNNNRTG 2 cut(s) 719, 1248
SphI GCATGC 1 cut(s) 847
SsiI CCGC 7 cut(s) 5, 80, 150, 751, 1060, 2272, 2304
SspMI CTAG 4 cut(s) 183, 777, 1740, 1841
SstI GAGCTC 1 cut(s) 138
StyD4I CCNGG 2 cut(s) 344, 1370
StyI CCWWGG 2 cut(s) 1809, 2225
TaaI ACNGT 4 cut(s) 211, 368, 672, 983
TaiI ACGT 1 cut(s) 1343
TaqI TCGA 6 cut(s) 54, 90, 144, 308, 1132, 1304
TaqII GACCGA 1 cut(s) 125
TatI WGTACW 4 cut(s) 416, 512, 1079, 1187
TauI GCSGC 3 cut(s) 7, 754, 2275
TfiI GAWTC 8 cut(s) 186, 263, 284, 563, 736, 784, 1150, 1618
Tru1I TTAA 7 cut(s) 747, 789, 864, 1016, 1125, 2025, 2067
Tru9I TTAA 7 cut(s) 747, 789, 864, 1016, 1125, 2025, 2067
TscAI CASTG 7 cut(s) 373, 451, 844, 978, 1780, 2043, 2190
TseFI GTSAC 4 cut(s) 635, 969, 1504, 2247
TseI GCWGC 4 cut(s) 908, 2114, 2318, 2321
Tsp45I GTSAC 4 cut(s) 635, 969, 1504, 2247
TspGWI ACGGA 3 cut(s) 29, 305, 493
TspRI CASTG 7 cut(s) 373, 451, 844, 978, 1780, 2043, 2190
Tth111I GACNNNGTC 1 cut(s) 304
VneI GTGCAC 1 cut(s) 2039
VpaK11BI GGWCC 1 cut(s) 1957
XagI CCTNNNNNAGG 1 cut(s) 1018
XapI RAATTY 8 cut(s) 1037, 1113, 1214, 1424, 1520, 1694, 2009, 2051
XbaI TCTAGA 1 cut(s) 776
XceI RCATGY 3 cut(s) 223, 847, 1505
XmiI GTMKAC 1 cut(s) 674
XmnI GAANNNNTTC 2 cut(s) 339, 944
XspI CTAG 4 cut(s) 183, 777, 1740, 1841
ZrmI AGTACT 1 cut(s) 1081
Zsp2I ATGCAT 1 cut(s) 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.