Rorug02G0352500

Dynein light chain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0007847
Physical Location & Seq
Reverse (-)
44337807 .. 44340698
2892 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0352500.1

Sequence Viewer

Length: 2892 bp
ATGGCTGAAGCACTTGTATCCTTCCTTGTAGAGCAGTTGGGTTCCTTCATCTTCCAACATGTGGAACAAAATGTGAAACTTGTTGTGAATGTCAAAAAAGAAGTAGTAAACCTTACCCTCAACCTCAAAACTATTCAAGCTGTGCTCGCGGATGCAGAGAGGAGGCAAGTCAAGGAGGACAGCGTGAGACGCTGGCTCAACAATCTGAAAGAAGTGTCGTACGAGATAGACGATGTGGTGGACGAGTGGAGCACTGAAATCCTCAAACAACAAATTGAGAACCAAGGTGACAATGATATTGTACCTAACAAGAAGGTATGTTTCTCTATTCCCTTCCGTTGTCTTTGTACTGGCCAAGTCACTCAGATAATTTCTCGTCGTGACATTGCTGTGAGGATAAAAGAGTTGAATGAGAAGTTAGCTTTGATTCATGAACAGCAAAAATTTTATAAGTTCCTTCAAAATGAAATAGAATTTGAGCAACCTGAACGATTGAAAAGTTTCTCAATTGTCGATAAATCTGGGACATTTGGTAGAGACTACGAAAGGAATAAACTAGTAAGCGAGTTAGTGAGTGAGAATAGTGAAGAAAGGAAGACGCCTCTTGTCAAATCTATTGTAGGTATGGGGGGGATAGGCAAAACAACTCTTGCCCAACTAGCCTATAATGATGAAAAAGTAAATGCTTGTTTTCATACAAGAATATGGGTTTGTGTCTCAGAACCCTTTGTACAAATCACAGTTGCCAAAGCCATCCTTGAGGGTCTTGAAGTAAAAGACCCAAATTCAAATGAGTTAGAAACTTATCTTCAACATATATCTAAGTCCATTGAGGGCAAGAAGTTCCTTCTTGTCCTAGATGATGTCTGGGACTCAGACCATAGAAAGTGGGAGCCCTTCTTCACAACATTAGGATGTGGTGGCTCAGGGAGTAGAATTTTGGTTACAACGCGAATAACGCAAGTTGCTAGTACACTGGGAGCAACTAGTGACCACACAATCCATTTGAAGGAGTTGGGTGAAGAAACTTGTCGGTCATTATTCTATCACATTGCATTTTTTGATGGTGAAAGAAAAGAGTCTAAAAAGTTTGAAGATATTGGTAATGAAATCGTGAAAAAGTGCAAAGGCTTGCCTCTTGCTGCTAAGACTTTGGGTAGTCTAATGCGGTGTAAGCAAACACTGCAACAATGGGTAGAGGTTTTGAATAGTAAGATATGGGAACTACAAGAGTTTGAGCAGCAAGTTTTCCAACCGTTATTACTAAGTTACTATGATTTGAAACCATTGTCCAAACGTTGTCTTTTGTATTGTGCTACATTTCCTAAAGATCATGTGATTGTTAAGGATAAGTTGATTGAGTTGTGGATGTCACAAGATTATCTTGAAGTCAAAGGTGGAAACAAAGAAAAGACAACAGTAGGTCAATGGTGTTTTGAGAACTTAGTAACGCGGTCATTCTTTCAAGATATTGAGGAAGATTCTGAGGGGAATATTGAAAGTTGTAAAATGCATGACATCGTGCATGACTTTGTGCAATATTTGACCAAGGATGAATGCTTTAGTATGGTGGTTAAGGGTGCTAATGAGAGAATGGAGTTACCGAGTGATGAGGTCAGTCATTTGTCTTTAATGTTTGCACCCAAGGGTCCATTTCCTGTTTCTTCTCTCAACTGTAAGAGTTTGCGCACTCTCACAGCTTTTGAATCGAAACTTACTAGCATTGGTGTTGAGTTGATTTCGCAATCAAAAAGCCTTAGGACTTTGAACTTGAGTGAAAACTCGATTCGAGAAGTTCCAAAGGAGATTGGTGGATTGATACATTTGAGATATCTGGACTTGTCTCAAAACCATGAACTGAAGGAATTGCTTGACAGTTTATGTGATTTATACAATCTACAAACCCTGCGACTTGTTGGGTGCAGTCAACTTGTCAAATTTCCCGATGAAGAGGCAATGAGAAAGCTAACCAAGTTAAAGCATCTTTATGTCTTTGAGTCCCCTCATCTCAAATCAAAAGGGATAGGGAGGTTAACCGGTCTGCAAAAGCTAGATGTGTTTCATCTAAATGGTTATAGGGGTGAGGACAAAGAAGGGACGTTGAAGTTGCAAGATTTGGAAAACTTGAACCAACTTGAAGGGAGTCTTTGGATTGAACACTTGGAGTCTGTGGAAGATGCGAGTGAGGGTGTAAAGGCATGTTTGAGTGAGAAACATCTCCTTCATCTGCGTCTAGATTTCTTATGTCAAAATGGATGTAATAAGCTGTATAGAGAAGAAGGGAGGGGCCAAAATGATAGAGAAATACTGAATGGGCTGCAACCACATGGAGGTTTGAAATCATTGACCATCCGGAACTGCCAGCTGGCTACTTCTCCGTGTCCTGATTGGATCTTGTCTTTACATAATCTGACAAGTCTTGAGCTTCGGTTTTTCCGTAATTGTGAGCTGCTTTCGGGTCCATTTGGGAGATTGCCGTCGCTTGAATCACTTCAATTTTGGGAGATGAAGAAAGTGAAAAAGGTGGGAGTGGAGTTTTTGGGAATTGAAGAAAGAGAATTACAATCATCCTCCTCCTCCTCCTCGTCTTCTCTTATTTTATTCCCCAAATTGAAAAGCCTCCGGTTCGTTTGGATGCACAAGTGGGAAGAGTGGGAAGGAGTGGGAGGGGATTTTCAGAATAATATTACCATAATGCCCTCCCTATCTCGCTTGGAATTTTACAGCTGCTCCAAACTTGGTACGCTGCCCGACTTCCTGCGCAAGACACCACTACTACAGAGCGTGGAAGTCATCCTTTCTCCAATTCTCAGGGGTAAAGTCGAGGACAAAACAAGTGAGGAGTGGGCCAAGATTTCTCACGTCCCAGACATCCAAGTGGAGGAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000775 GO:0000776 GO:0001505 GO:0002791 GO:0002793 GO:0003006 GO:0003674 GO:0004857 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005868 GO:0005875 GO:0006807 GO:0006809 GO:0006810 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007276 GO:0007281 GO:0007283 GO:0007286 GO:0008092 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0010646 GO:0010647 GO:0010817 GO:0010970 GO:0012505 GO:0015630 GO:0016043 GO:0017144 GO:0019899 GO:0019953 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023056 GO:0030030 GO:0030031 GO:0030141 GO:0030154 GO:0030234 GO:0030235 GO:0030286 GO:0030424 GO:0030705 GO:0031410 GO:0031982 GO:0032024 GO:0032501 GO:0032502 GO:0032504 GO:0032781 GO:0032838 GO:0032879 GO:0032880 GO:0032991 GO:0033267 GO:0034641 GO:0035774 GO:0042133 GO:0042136 GO:0042802 GO:0042803 GO:0042995 GO:0043005 GO:0043085 GO:0043086 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043462 GO:0044085 GO:0044092 GO:0044093 GO:0044237 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0044703 GO:0044782 GO:0045505 GO:0046209 GO:0046883 GO:0046887 GO:0046907 GO:0046982 GO:0046983 GO:0048232 GO:0048468 GO:0048515 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048856 GO:0048869 GO:0050708 GO:0050714 GO:0050789 GO:0050790 GO:0050794 GO:0050796 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051704 GO:0051959 GO:0060271 GO:0060341 GO:0061178 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070925 GO:0071840 GO:0072593 GO:0072686 GO:0090087 GO:0090276 GO:0090277 GO:0097110 GO:0097458 GO:0097708 GO:0098687 GO:0098772 GO:0099111 GO:0099503 GO:0099568 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:0120111 GO:1902494 GO:1903409 GO:1903530 GO:1903532 GO:1904115 GO:1904951 GO:2000574 GO:2000576 GO:2000580 GO:2000582 GO:2001057
KEGG Pathways
Metabolic & Signaling
ko04962 map04962
Pfam Domains
Protein Families
Dynein_light

Protein Analysis

963

Amino Acids

110.25

Weight (kDa)

5.89

Isoelectric Point (pI)

50.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 95 3.3e-23 Rx N-terminal domain
NB-ARC PF00931 183 - 353 1.2e-32 NB-ARC domain
WHD_DRP PF23559 441 - 512 5.3e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 562 - 908 9.4e-25 Leucine-rich repeat region
LRR_8 PF13855 562 - 618 2.5e-08 Leucine rich repeat
LRR_8 PF13855 585 - 641 3.9e-07 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 703 - 836 1.3e-23 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 450
Acc16I TGCGCA 2 cut(s) 1688, 2762
AccB7I CCANNNNNTGG 1 cut(s) 61
AccII CGCG 3 cut(s) 149, 952, 1453
AccIII TCCGGA 1 cut(s) 2352
AciI CCGC 3 cut(s) 149, 1168, 1453
AclI AACGTT 1 cut(s) 1297
AclWI GGATC 1 cut(s) 2399
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 7 cut(s) 443, 473, 784, 936, 1937, 2717, 2885
AcuI CTGAAG 2 cut(s) 27, 1880
AcyI GRCGYC 1 cut(s) 599
AfaI GTAC 6 cut(s) 221, 303, 349, 732, 973, 2743
AfiI CCNNNNNNNGG 4 cut(s) 61, 1009, 2330, 2881
AflIII ACRYGT 1 cut(s) 58
AgeI ACCGGT 1 cut(s) 2036
AhlI ACTAGT 2 cut(s) 556, 986
AjiI CACGTC 1 cut(s) 2863
Alw21I GWGCWC 2 cut(s) 147, 254
Alw26I GTCTC 4 cut(s) 181, 531, 721, 1848
AlwI GGATC 1 cut(s) 2399
Aor13HI TCCGGA 1 cut(s) 2352
AoxI GGCC 3 cut(s) 352, 2287, 2847
ApeKI GCWGC 6 cut(s) 1142, 1240, 2317, 2449, 2727, 2746
ApoI RAATTY 7 cut(s) 443, 473, 784, 936, 1937, 2717, 2885
AsiGI ACCGGT 1 cut(s) 2036
Asp700I GAANNNNTTC 2 cut(s) 500, 2490
AspLEI GCGC 2 cut(s) 1689, 2763
AspS9I GGNCC 4 cut(s) 1649, 2287, 2459, 2847
AsuHPI GGTGA 4 cut(s) 299, 1031, 1079, 2093
AvaII GGWCC 2 cut(s) 1649, 2459
AxyI CCTNAGG 1 cut(s) 1757
BalI TGGCCA 1 cut(s) 354
BanII GRGCYC 1 cut(s) 897
BbsI GAAGAC 2 cut(s) 602, 2580
Bbv12I GWGCWC 2 cut(s) 147, 254
BbvI GCAGC 6 cut(s) 1129, 1252, 2304, 2436, 2714, 2733
BccI CCATC 3 cut(s) 761, 1058, 2357
BceAI ACGGC 1 cut(s) 2461
BciVI GTATCC 1 cut(s) 28
BcoDI GTCTC 4 cut(s) 181, 531, 721, 1848
BcuI ACTAGT 2 cut(s) 556, 986
BfaI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1719, 2051, 2234
BfmI CTRYAG 1 cut(s) 2777
BfuI GTATCC 1 cut(s) 28
BisI GCNGC 6 cut(s) 1143, 1241, 2318, 2450, 2728, 2747
BlsI GCNGC 6 cut(s) 1144, 1242, 2319, 2451, 2729, 2748
Bme18I GGWCC 2 cut(s) 1649, 2459
BmgBI CACGTC 1 cut(s) 2863
BmgT120I GGNCC 4 cut(s) 1649, 2287, 2459, 2847
BmiI GGNNCC 5 cut(s) 43, 894, 1650, 2288, 2460
BmrI ACTGGG 1 cut(s) 986
BmsI GCATC 4 cut(s) 142, 1990, 2167, 2625
BmuI ACTGGG 1 cut(s) 986
BpiI GAAGAC 2 cut(s) 602, 2580
Bpu10I CCTNAGC 1 cut(s) 925
BpuEI CTTGAG 3 cut(s) 779, 1792, 2441
BsaHI GRCGYC 1 cut(s) 599
BsaJI CCNNGG 3 cut(s) 283, 1548, 1644
BsaWI WCCGGW 3 cut(s) 2036, 2352, 2622
BsaXI ACNNNNNCTCC 2 cut(s) 2714, 2744
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 1009, 2330, 2881
Bse118I RCCGGY 1 cut(s) 2036
Bse1I ACTGG 2 cut(s) 355, 981
Bse21I CCTNAGG 1 cut(s) 1757
Bse3DI GCAATG 3 cut(s) 384, 1050, 1962
BseAI TCCGGA 1 cut(s) 2352
BseDI CCNNGG 3 cut(s) 283, 1548, 1644
BseLI CCNNNNNNNGG 4 cut(s) 61, 1009, 2330, 2881
BseMI GCAATG 3 cut(s) 384, 1050, 1962
BseMII CTCAG 6 cut(s) 377, 732, 888, 939, 1476, 2824
BseNI ACTGG 2 cut(s) 355, 981
BseRI GAGGAG 6 cut(s) 175, 2563, 2566, 2569, 2572, 2855
BseXI GCAGC 6 cut(s) 1129, 1252, 2304, 2436, 2714, 2733
BsgI GTGCAG 1 cut(s) 1942
Bsh1236I CGCG 3 cut(s) 149, 952, 1453
BshFI GGCC 3 cut(s) 354, 2289, 2849
BshTI ACCGGT 1 cut(s) 2036
BsiHKAI GWGCWC 2 cut(s) 147, 254
BsiSI CCGG 3 cut(s) 2037, 2353, 2623
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 5 cut(s) 538, 884, 1984, 2110, 2849
BslI CCNNNNNNNGG 4 cut(s) 61, 1009, 2330, 2881
BsmAI GTCTC 4 cut(s) 181, 531, 721, 1848
BsmBI CGTCTC 1 cut(s) 181
BsmFI GGGAC 5 cut(s) 538, 884, 1984, 2110, 2849
BsmI GAATGC 1 cut(s) 1562
BsnI GGCC 3 cut(s) 354, 2289, 2849
Bsp1286I GDGCHC 3 cut(s) 147, 254, 897
Bsp13I TCCGGA 1 cut(s) 2352
Bsp1407I TGTACA 1 cut(s) 730
Bsp143I GATC 2 cut(s) 1330, 2391
BspACI CCGC 3 cut(s) 149, 1168, 1453
BspANI GGCC 3 cut(s) 354, 2289, 2849
BspCNI CTCAG 6 cut(s) 376, 731, 887, 938, 1477, 2823
BspEI TCCGGA 1 cut(s) 2352
BspFNI CGCG 3 cut(s) 149, 952, 1453
BspHI TCATGA 1 cut(s) 430
BspLI GGNNCC 5 cut(s) 43, 894, 1650, 2288, 2460
BspPI GGATC 1 cut(s) 2399
BsrDI GCAATG 3 cut(s) 384, 1050, 1962
BsrFI RCCGGY 1 cut(s) 2036
BsrGI TGTACA 1 cut(s) 730
BsrI ACTGG 2 cut(s) 355, 981
BssAI RCCGGY 1 cut(s) 2036
BssECI CCNNGG 3 cut(s) 283, 1548, 1644
BssMI GATC 2 cut(s) 1330, 2391
BssNI GRCGYC 1 cut(s) 599
BssT1I CCWWGG 3 cut(s) 283, 1548, 1644
Bst4CI ACNGT 5 cut(s) 742, 1257, 1420, 1676, 1877
Bst6I CTCTTC 2 cut(s) 1944, 2643
BstACI GRCGYC 1 cut(s) 599
BstAPI GCANNNNNTGC 1 cut(s) 1183
BstAUI TGTACA 1 cut(s) 730
BstC8I GCNNGC 5 cut(s) 147, 194, 1133, 2363, 2367
BstFNI CGCG 3 cut(s) 149, 952, 1453
BstHHI GCGC 2 cut(s) 1689, 2763
BstKTI GATC 2 cut(s) 1333, 2394
BstMAI GTCTC 4 cut(s) 181, 531, 721, 1848
BstMBI GATC 2 cut(s) 1330, 2391
BstMWI GCNNNNNNNGC 6 cut(s) 146, 189, 659, 958, 1174, 1183
BstNSI RCATGY 2 cut(s) 62, 2202
BstSFI CTRYAG 1 cut(s) 2777
BstUI CGCG 3 cut(s) 149, 952, 1453
BstV1I GCAGC 6 cut(s) 1129, 1252, 2304, 2436, 2714, 2733
BstV2I GAAGAC 2 cut(s) 602, 2580
BstX2I RGATCY 1 cut(s) 2391
BstYI RGATCY 1 cut(s) 2391
Bsu36I CCTNAGG 1 cut(s) 1757
BsuI GTATCC 1 cut(s) 28
BsuRI GGCC 3 cut(s) 354, 2289, 2849
BtrI CACGTC 1 cut(s) 2863
BtsI GCAGTG 1 cut(s) 1181
BtsIMutI CAGTG 3 cut(s) 252, 974, 1181
Cac8I GCNNGC 5 cut(s) 147, 194, 1133, 2363, 2367
CciI TCATGA 1 cut(s) 430
CfoI GCGC 2 cut(s) 1689, 2763
Cfr10I RCCGGY 1 cut(s) 2036
Cfr13I GGNCC 4 cut(s) 1649, 2287, 2459, 2847
CseI GACGC 3 cut(s) 198, 607, 2219
Csp6I GTAC 6 cut(s) 220, 302, 348, 731, 972, 2742
CspAI ACCGGT 1 cut(s) 2036
CviAII CATG 8 cut(s) 59, 431, 1334, 1514, 1526, 1853, 2199, 2327
CviQI GTAC 6 cut(s) 220, 302, 348, 731, 972, 2742
DpnI GATC 2 cut(s) 1332, 2393
DpnII GATC 2 cut(s) 1330, 2391
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 2 cut(s) 1944, 2643
EarI CTCTTC 2 cut(s) 1944, 2643
Eco130I CCWWGG 3 cut(s) 283, 1548, 1644
Eco24I GRGCYC 1 cut(s) 897
Eco32I GATATC 1 cut(s) 1832
Eco47I GGWCC 2 cut(s) 1649, 2459
Eco57I CTGAAG 2 cut(s) 27, 1880
Eco81I CCTNAGG 1 cut(s) 1757
EcoRI GAATTC 1 cut(s) 2885
EcoRV GATATC 1 cut(s) 1832
EcoT14I CCWWGG 3 cut(s) 283, 1548, 1644
EcoT22I ATGCAT 1 cut(s) 1515
EcoT38I GRGCYC 1 cut(s) 897
ErhI CCWWGG 3 cut(s) 283, 1548, 1644
Esp3I CGTCTC 1 cut(s) 181
FaeI CATG 8 cut(s) 62, 434, 1337, 1517, 1529, 1856, 2202, 2330
FalI AAGNNNNNCTT 8 cut(s) 741, 773, 1368, 1400, 2130, 2162, 2781, 2813
FaqI GGGAC 5 cut(s) 538, 884, 1984, 2110, 2849
FatI CATG 8 cut(s) 58, 430, 1333, 1513, 1525, 1852, 2198, 2326
Fnu4HI GCNGC 6 cut(s) 1143, 1241, 2318, 2450, 2728, 2747
FriOI GRGCYC 1 cut(s) 897
Fsp4HI GCNGC 6 cut(s) 1143, 1241, 2318, 2450, 2728, 2747
FspBI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1719, 2051, 2234
FspI TGCGCA 2 cut(s) 1688, 2762
GlaI GCGC 2 cut(s) 1688, 2762
GluI GCNGC 6 cut(s) 1143, 1241, 2318, 2450, 2728, 2747
HaeIII GGCC 3 cut(s) 354, 2289, 2849
HapII CCGG 3 cut(s) 2037, 2353, 2623
HgaI GACGC 3 cut(s) 198, 607, 2219
HhaI GCGC 2 cut(s) 1689, 2763
Hin1I GRCGYC 1 cut(s) 599
Hin1II CATG 8 cut(s) 62, 434, 1337, 1517, 1529, 1856, 2202, 2330
Hin6I GCGC 2 cut(s) 1687, 2761
HinP1I GCGC 2 cut(s) 1687, 2761
HincII GTYRAC 2 cut(s) 1928, 2034
HindII GTYRAC 2 cut(s) 1928, 2034
HpaI GTTAAC 1 cut(s) 2034
HpaII CCGG 3 cut(s) 2037, 2353, 2623
HphI GGTGA 4 cut(s) 299, 1031, 1079, 2093
Hpy166II GTNNAC 5 cut(s) 109, 241, 974, 1928, 2034
Hpy188I TCNGA 8 cut(s) 207, 366, 721, 877, 1486, 2412, 2679, 2891
Hpy8I GTNNAC 5 cut(s) 109, 241, 974, 1928, 2034
Hpy99I CGWCG 2 cut(s) 381, 2482
HpyCH4III ACNGT 5 cut(s) 742, 1257, 1420, 1676, 1877
HpyCH4IV ACGT 3 cut(s) 1297, 2099, 2862
HpyF10VI GCNNNNNNNGC 6 cut(s) 146, 189, 659, 958, 1174, 1183
HpySE526I ACGT 3 cut(s) 1297, 2099, 2862
Hsp92I GRCGYC 1 cut(s) 599
Hsp92II CATG 8 cut(s) 62, 434, 1337, 1517, 1529, 1856, 2202, 2330
HspAI GCGC 2 cut(s) 1687, 2761
Kpn2I TCCGGA 1 cut(s) 2352
KspAI GTTAAC 1 cut(s) 2034
Kzo9I GATC 2 cut(s) 1330, 2391
LmnI GCTCC 4 cut(s) 249, 892, 980, 2735
Lsp1109I GCAGC 6 cut(s) 1129, 1252, 2304, 2436, 2714, 2733
LweI GCATC 4 cut(s) 142, 1990, 2167, 2625
MaeI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1719, 2051, 2234
MaeII ACGT 3 cut(s) 1297, 2099, 2862
MaeIII GTNAC 9 cut(s) 287, 358, 380, 943, 989, 1268, 1371, 1447, 1599
MalI GATC 2 cut(s) 1332, 2393
MboI GATC 2 cut(s) 1330, 2391
MfeI CAATTG 1 cut(s) 507
MflI RGATCY 1 cut(s) 2391
MhlI GDGCHC 3 cut(s) 147, 254, 897
MlsI TGGCCA 1 cut(s) 354
MluNI TGGCCA 1 cut(s) 354
MlyI GAGTC 5 cut(s) 866, 1088, 2006, 2152, 2174
MmeI TCCRAC 2 cut(s) 79, 1276
Mox20I TGGCCA 1 cut(s) 354
Mph1103I ATGCAT 1 cut(s) 1515
MroI TCCGGA 1 cut(s) 2352
MroXI GAANNNNTTC 2 cut(s) 500, 2490
MscI TGGCCA 1 cut(s) 354
MseI TTAA 5 cut(s) 1344, 1575, 1631, 1976, 2033
MslI CAYNNNNRTG 5 cut(s) 389, 913, 1986, 2067, 2876
Msp20I TGGCCA 1 cut(s) 354
MspA1I CMGCKG 2 cut(s) 2365, 2727
MspI CCGG 3 cut(s) 2037, 2353, 2623
MunI CAATTG 1 cut(s) 507
Mva1269I GAATGC 1 cut(s) 1562
MvnI CGCG 3 cut(s) 149, 952, 1453
MwoI GCNNNNNNNGC 6 cut(s) 146, 189, 659, 958, 1174, 1183
NdeII GATC 2 cut(s) 1330, 2391
NlaIII CATG 8 cut(s) 62, 434, 1337, 1517, 1529, 1856, 2202, 2330
NlaIV GGNNCC 5 cut(s) 43, 894, 1650, 2288, 2460
NmuCI GTSAC 5 cut(s) 287, 358, 380, 989, 1371
NsbI TGCGCA 2 cut(s) 1688, 2762
NsiI ATGCAT 1 cut(s) 1515
NspI RCATGY 2 cut(s) 62, 2202
PagI TCATGA 1 cut(s) 430
PciI ACATGT 1 cut(s) 58
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 2434
PctI GAATGC 1 cut(s) 1562
PdmI GAANNNNTTC 2 cut(s) 500, 2490
PfeI GAWTC 5 cut(s) 427, 1481, 1706, 1786, 2486
Pfl23II CGTACG 1 cut(s) 219
PflMI CCANNNNNTGG 1 cut(s) 61
PinAI ACCGGT 1 cut(s) 2036
PkrI GCNGC 6 cut(s) 1144, 1242, 2319, 2451, 2729, 2748
PleI GAGTC 5 cut(s) 866, 1087, 2005, 2151, 2173
PpsI GAGTC 5 cut(s) 866, 1087, 2005, 2151, 2173
PscI ACATGT 1 cut(s) 58
PsiI TTATAA 1 cut(s) 450
Psp1406I AACGTT 1 cut(s) 1297
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 5 cut(s) 43, 894, 1650, 2288, 2460
PspPI GGNCC 4 cut(s) 1649, 2287, 2459, 2847
PsrI GAACNNNNNNTAC 2 cut(s) 714, 746
PsuI RGATCY 1 cut(s) 2391
PvuII CAGCTG 2 cut(s) 2365, 2727
RsaI GTAC 6 cut(s) 221, 303, 349, 732, 973, 2743
RsaNI GTAC 6 cut(s) 220, 302, 348, 731, 972, 2742
RseI CAYNNNNRTG 5 cut(s) 389, 913, 1986, 2067, 2876
SaqAI TTAA 5 cut(s) 1344, 1575, 1631, 1976, 2033
SatI GCNGC 6 cut(s) 1143, 1241, 2318, 2450, 2728, 2747
Sau3AI GATC 2 cut(s) 1330, 2391
Sau96I GGNCC 4 cut(s) 1649, 2287, 2459, 2847
SchI GAGTC 5 cut(s) 866, 1088, 2006, 2152, 2174
SduI GDGCHC 3 cut(s) 147, 254, 897
SfaNI GCATC 4 cut(s) 142, 1990, 2167, 2625
SfcI CTRYAG 1 cut(s) 2777
SinI GGWCC 2 cut(s) 1649, 2459
SmiMI CAYNNNNRTG 5 cut(s) 389, 913, 1986, 2067, 2876
SmlI CTYRAG 3 cut(s) 758, 1771, 2420
SmoI CTYRAG 3 cut(s) 758, 1771, 2420
SpeI ACTAGT 2 cut(s) 556, 986
SsiI CCGC 3 cut(s) 149, 1168, 1453
SspI AATATT 3 cut(s) 1495, 1541, 2686
SspMI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1719, 2051, 2234
StyI CCWWGG 3 cut(s) 283, 1548, 1644
TaaI ACNGT 5 cut(s) 742, 1257, 1420, 1676, 1877
TaiI ACGT 3 cut(s) 1300, 2102, 2865
TaqI TCGA 5 cut(s) 513, 1709, 1784, 1789, 2823
TaqII GACCGA 1 cut(s) 1023
TatI WGTACW 3 cut(s) 347, 730, 971
TfiI GAWTC 5 cut(s) 427, 1481, 1706, 1786, 2486
Tru1I TTAA 5 cut(s) 1344, 1575, 1631, 1976, 2033
Tru9I TTAA 5 cut(s) 1344, 1575, 1631, 1976, 2033
TscAI CASTG 3 cut(s) 259, 981, 1188
TseFI GTSAC 5 cut(s) 287, 358, 380, 989, 1371
TseI GCWGC 6 cut(s) 1142, 1240, 2317, 2449, 2727, 2746
Tsp45I GTSAC 5 cut(s) 287, 358, 380, 989, 1371
TspGWI ACGGA 3 cut(s) 326, 2367, 2426
TspRI CASTG 3 cut(s) 259, 981, 1188
Van91I CCANNNNNTGG 1 cut(s) 61
VpaK11BI GGWCC 2 cut(s) 1649, 2459
XapI RAATTY 7 cut(s) 443, 473, 784, 936, 1937, 2717, 2885
XbaI TCTAGA 1 cut(s) 2233
XceI RCATGY 2 cut(s) 62, 2202
XmnI GAANNNNTTC 2 cut(s) 500, 2490
XspI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1719, 2051, 2234
Zsp2I ATGCAT 1 cut(s) 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.