Regulator of chromosome condensation (RCC1) repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60870 AT5G60870 AT5G60870 AT5G60870 |
| fragaria_vesca | FvH4_6g39230 FvH4_6g39230 |
| malus_domestica | MD09G1144200.v1.1 |
| prunus_persica | Prupe.3G183700_v2.0.a1 Prupe.3G183700_v2.0.a1 |
| pyrus_communis | pycom09g06360 pycom17g12330 |
| rosa_chinensis | RchiOBHm_Chr2g0153071 |
| rosa_laevigata | RLG00000020674 |
| rosa_multiflora | Rmu_sc0000218.1_g000027 Rmu_sc0037109.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00095220 Rroxscaffold_2G00095250 |
| rosa_rugosa | Rorug02G0437100 |
| rosa_samantha | Rh2AG499300 Rh2BG510600 Rh2CG485700 Rh2DG522300 |
| rosa_wichuraiana | Rw2G040980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 280 |
| Acc36I | ACCTGC | 1 cut(s) | 280 |
| AccB1I | GGYRCC | 1 cut(s) | 164 |
| AccBSI | CCGCTC | 1 cut(s) | 253 |
| AciI | CCGC | 2 cut(s) | 175, 253 |
| AclI | AACGTT | 2 cut(s) | 475, 1538 |
| AcsI | RAATTY | 1 cut(s) | 616 |
| AcuI | CTGAAG | 1 cut(s) | 142 |
| AfaI | GTAC | 3 cut(s) | 1107, 1221, 1477 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 949 |
| AflII | CTTAAG | 1 cut(s) | 506 |
| AflIII | ACRYGT | 2 cut(s) | 400, 1493 |
| AgeI | ACCGGT | 1 cut(s) | 1002 |
| AgsI | TTSAA | 7 cut(s) | 470, 481, 554, 564, 689, 1186, 1192 |
| AjiI | CACGTC | 1 cut(s) | 1034 |
| AjnI | CCWGG | 2 cut(s) | 566, 978 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 660, 692 |
| AluBI | AGCT | 8 cut(s) | 36, 156, 536, 865, 886, 1028, 1094, 1172 |
| AluI | AGCT | 8 cut(s) | 36, 156, 536, 865, 886, 1028, 1094, 1172 |
| Alw26I | GTCTC | 2 cut(s) | 47, 800 |
| Ama87I | CYCGRG | 2 cut(s) | 634, 711 |
| AoxI | GGCC | 1 cut(s) | 90 |
| ApeKI | GCWGC | 3 cut(s) | 533, 819, 1259 |
| ApoI | RAATTY | 1 cut(s) | 616 |
| AsiGI | ACCGGT | 1 cut(s) | 1002 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 585, 1404 |
| AspLEI | GCGC | 2 cut(s) | 1255, 1547 |
| AspS9I | GGNCC | 1 cut(s) | 852 |
| AsuHPI | GGTGA | 2 cut(s) | 581, 782 |
| AvaI | CYCGRG | 2 cut(s) | 634, 711 |
| AvaII | GGWCC | 1 cut(s) | 852 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 414, 447 |
| BanI | GGYRCC | 1 cut(s) | 164 |
| BbvI | GCAGC | 3 cut(s) | 545, 806, 1246 |
| BccI | CCATC | 4 cut(s) | 201, 339, 419, 644 |
| BceAI | ACGGC | 3 cut(s) | 951, 966, 1458 |
| BciT130I | CCWGG | 2 cut(s) | 568, 980 |
| BciVI | GTATCC | 1 cut(s) | 442 |
| BcoDI | GTCTC | 2 cut(s) | 47, 800 |
| BfaI | CTAG | 2 cut(s) | 23, 1077 |
| BfmI | CTRYAG | 2 cut(s) | 936, 1260 |
| BfrI | CTTAAG | 1 cut(s) | 506 |
| BfuAI | ACCTGC | 1 cut(s) | 280 |
| BfuI | GTATCC | 1 cut(s) | 442 |
| BisI | GCNGC | 3 cut(s) | 534, 820, 1260 |
| BlsI | GCNGC | 3 cut(s) | 535, 821, 1261 |
| BmcAI | AGTACT | 1 cut(s) | 1107 |
| Bme1390I | CCNGG | 2 cut(s) | 568, 980 |
| Bme18I | GGWCC | 1 cut(s) | 852 |
| BmeT110I | CYCGRG | 2 cut(s) | 634, 711 |
| BmgBI | CACGTC | 1 cut(s) | 1034 |
| BmgT120I | GGNCC | 1 cut(s) | 852 |
| BmiI | GGNNCC | 3 cut(s) | 166, 853, 854 |
| BmrFI | CCNGG | 2 cut(s) | 568, 980 |
| BmsI | GCATC | 4 cut(s) | 769, 802, 1275, 1547 |
| BpmI | CTGGAG | 1 cut(s) | 1116 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1051, 1273 |
| BpuEI | CTTGAG | 3 cut(s) | 269, 1169, 1402 |
| BsaBI | GATNNNNATC | 2 cut(s) | 243, 410 |
| BsaI | GGTCTC | 1 cut(s) | 47 |
| BsaJI | CCNNGG | 1 cut(s) | 567 |
| BsaWI | WCCGGW | 1 cut(s) | 1002 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1089, 1105, 1119, 1135 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 949 |
| Bse118I | RCCGGY | 1 cut(s) | 1002 |
| Bse1I | ACTGG | 3 cut(s) | 75, 378, 601 |
| Bse8I | GATNNNNATC | 2 cut(s) | 243, 410 |
| BseBI | CCWGG | 2 cut(s) | 568, 980 |
| BseDI | CCNNGG | 1 cut(s) | 567 |
| BseGI | GGATG | 6 cut(s) | 120, 217, 577, 1251, 1266, 1324 |
| BseJI | GATNNNNATC | 2 cut(s) | 243, 410 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 949 |
| BseMII | CTCAG | 7 cut(s) | 50, 166, 336, 489, 976, 1065, 1100 |
| BseNI | ACTGG | 3 cut(s) | 75, 378, 601 |
| BseRI | GAGGAG | 3 cut(s) | 85, 1126, 1131 |
| BseXI | GCAGC | 3 cut(s) | 545, 806, 1246 |
| BshFI | GGCC | 1 cut(s) | 92 |
| BshNI | GGYRCC | 1 cut(s) | 164 |
| BshTI | ACCGGT | 1 cut(s) | 1002 |
| BsiHKCI | CYCGRG | 2 cut(s) | 634, 711 |
| BsiSI | CCGG | 1 cut(s) | 1003 |
| BslFI | GGGAC | 2 cut(s) | 865, 920 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 949 |
| BsmAI | GTCTC | 2 cut(s) | 47, 800 |
| BsmBI | CGTCTC | 1 cut(s) | 800 |
| BsmFI | GGGAC | 2 cut(s) | 865, 920 |
| BsmI | GAATGC | 1 cut(s) | 1198 |
| BsnI | GGCC | 1 cut(s) | 92 |
| Bso31I | GGTCTC | 1 cut(s) | 47 |
| BsoBI | CYCGRG | 2 cut(s) | 634, 711 |
| Bsp1407I | TGTACA | 1 cut(s) | 1219 |
| Bsp143I | GATC | 3 cut(s) | 296, 312, 718 |
| BspACI | CCGC | 2 cut(s) | 175, 253 |
| BspANI | GGCC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 7 cut(s) | 51, 165, 335, 490, 975, 1064, 1101 |
| BspLI | GGNNCC | 3 cut(s) | 166, 853, 854 |
| BspMAI | CTGCAG | 1 cut(s) | 1264 |
| BspMI | ACCTGC | 1 cut(s) | 280 |
| BspT107I | GGYRCC | 1 cut(s) | 164 |
| BspTI | CTTAAG | 1 cut(s) | 506 |
| BspTNI | GGTCTC | 1 cut(s) | 47 |
| BsrBI | CCGCTC | 1 cut(s) | 253 |
| BsrFI | RCCGGY | 1 cut(s) | 1002 |
| BsrGI | TGTACA | 1 cut(s) | 1219 |
| BsrI | ACTGG | 3 cut(s) | 75, 378, 601 |
| BssAI | RCCGGY | 1 cut(s) | 1002 |
| BssECI | CCNNGG | 1 cut(s) | 567 |
| BssMI | GATC | 3 cut(s) | 296, 312, 718 |
| Bst2UI | CCWGG | 2 cut(s) | 568, 980 |
| Bst4CI | ACNGT | 5 cut(s) | 427, 495, 794, 944, 1127 |
| Bst6I | CTCTTC | 2 cut(s) | 103, 805 |
| BstAFI | CTTAAG | 1 cut(s) | 506 |
| BstAUI | TGTACA | 1 cut(s) | 1219 |
| BstC8I | GCNNGC | 3 cut(s) | 817, 1257, 1264 |
| BstDEI | CTNAG | 8 cut(s) | 59, 152, 322, 498, 962, 1051, 1109, 1273 |
| BstEII | GGTNACC | 1 cut(s) | 1121 |
| BstF5I | GGATG | 6 cut(s) | 120, 217, 577, 1251, 1266, 1324 |
| BstHHI | GCGC | 2 cut(s) | 1255, 1547 |
| BstKTI | GATC | 3 cut(s) | 299, 315, 721 |
| BstMAI | GTCTC | 2 cut(s) | 47, 800 |
| BstMBI | GATC | 3 cut(s) | 296, 312, 718 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 162, 883, 1259 |
| BstNI | CCWGG | 2 cut(s) | 568, 980 |
| BstNSI | RCATGY | 5 cut(s) | 404, 1259, 1422, 1497, 1551 |
| BstPI | GGTNACC | 1 cut(s) | 1121 |
| BstSCI | CCNGG | 2 cut(s) | 566, 978 |
| BstSFI | CTRYAG | 2 cut(s) | 936, 1260 |
| BstV1I | GCAGC | 3 cut(s) | 545, 806, 1246 |
| BsuI | GTATCC | 1 cut(s) | 442 |
| BsuRI | GGCC | 1 cut(s) | 92 |
| BtgZI | GCGATG | 1 cut(s) | 1399 |
| BtrI | CACGTC | 1 cut(s) | 1034 |
| BtsCI | GGATG | 6 cut(s) | 120, 217, 577, 1251, 1266, 1324 |
| BtsI | GCAGTG | 1 cut(s) | 960 |
| BtsIMutI | CAGTG | 1 cut(s) | 960 |
| BveI | ACCTGC | 1 cut(s) | 280 |
| Cac8I | GCNNGC | 3 cut(s) | 817, 1257, 1264 |
| CfoI | GCGC | 2 cut(s) | 1255, 1547 |
| Cfr10I | RCCGGY | 1 cut(s) | 1002 |
| Cfr13I | GGNCC | 1 cut(s) | 852 |
| CseI | GACGC | 1 cut(s) | 491 |
| Csp6I | GTAC | 3 cut(s) | 1106, 1220, 1476 |
| CspAI | ACCGGT | 1 cut(s) | 1002 |
| CviAII | CATG | 7 cut(s) | 53, 401, 1256, 1314, 1419, 1494, 1548 |
| CviQI | GTAC | 3 cut(s) | 1106, 1220, 1476 |
| DdeI | CTNAG | 8 cut(s) | 59, 152, 322, 498, 962, 1051, 1109, 1273 |
| DpnI | GATC | 3 cut(s) | 298, 314, 720 |
| DpnII | GATC | 3 cut(s) | 296, 312, 718 |
| Eam1104I | CTCTTC | 2 cut(s) | 103, 805 |
| EarI | CTCTTC | 2 cut(s) | 103, 805 |
| Eco31I | GGTCTC | 1 cut(s) | 47 |
| Eco32I | GATATC | 1 cut(s) | 922 |
| Eco47I | GGWCC | 1 cut(s) | 852 |
| Eco57I | CTGAAG | 1 cut(s) | 142 |
| Eco88I | CYCGRG | 2 cut(s) | 634, 711 |
| Eco91I | GGTNACC | 1 cut(s) | 1121 |
| EcoO109I | RGGNCCY | 1 cut(s) | 852 |
| EcoO65I | GGTNACC | 1 cut(s) | 1121 |
| EcoRII | CCWGG | 2 cut(s) | 566, 978 |
| EcoRV | GATATC | 1 cut(s) | 922 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| Esp3I | CGTCTC | 1 cut(s) | 800 |
| FaeI | CATG | 7 cut(s) | 56, 404, 1259, 1317, 1422, 1497, 1551 |
| FaqI | GGGAC | 2 cut(s) | 865, 920 |
| FatI | CATG | 7 cut(s) | 52, 400, 1255, 1313, 1418, 1493, 1547 |
| FauI | CCCGC | 2 cut(s) | 182, 246 |
| Fnu4HI | GCNGC | 3 cut(s) | 534, 820, 1260 |
| FokI | GGATG | 6 cut(s) | 107, 224, 584, 1253, 1258, 1331 |
| Fsp4HI | GCNGC | 3 cut(s) | 534, 820, 1260 |
| FspBI | CTAG | 2 cut(s) | 23, 1077 |
| GlaI | GCGC | 2 cut(s) | 1254, 1546 |
| GluI | GCNGC | 3 cut(s) | 534, 820, 1260 |
| GsuI | CTGGAG | 1 cut(s) | 1116 |
| HaeIII | GGCC | 1 cut(s) | 92 |
| HapII | CCGG | 1 cut(s) | 1003 |
| HgaI | GACGC | 1 cut(s) | 491 |
| HhaI | GCGC | 2 cut(s) | 1255, 1547 |
| Hin1II | CATG | 7 cut(s) | 56, 404, 1259, 1317, 1422, 1497, 1551 |
| Hin6I | GCGC | 2 cut(s) | 1253, 1545 |
| HinP1I | GCGC | 2 cut(s) | 1253, 1545 |
| HincII | GTYRAC | 1 cut(s) | 1000 |
| HindII | GTYRAC | 1 cut(s) | 1000 |
| HindIII | AAGCTT | 2 cut(s) | 34, 884 |
| HinfI | GANTC | 7 cut(s) | 554, 575, 586, 629, 689, 1062, 1564 |
| HpaII | CCGG | 1 cut(s) | 1003 |
| HphI | GGTGA | 2 cut(s) | 581, 782 |
| Hpy166II | GTNNAC | 2 cut(s) | 1000, 1478 |
| Hpy188I | TCNGA | 9 cut(s) | 16, 60, 118, 161, 325, 436, 499, 580, 1201 |
| Hpy8I | GTNNAC | 2 cut(s) | 1000, 1478 |
| HpyAV | CCTTC | 5 cut(s) | 287, 508, 836, 1196, 1390 |
| HpyCH4III | ACNGT | 5 cut(s) | 427, 495, 794, 944, 1127 |
| HpyCH4IV | ACGT | 4 cut(s) | 475, 1033, 1516, 1538 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 367, 381, 830, 1262, 1509 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 162, 883, 1259 |
| HpyF3I | CTNAG | 8 cut(s) | 59, 152, 322, 498, 962, 1051, 1109, 1273 |
| HpySE526I | ACGT | 4 cut(s) | 475, 1033, 1516, 1538 |
| Hsp92II | CATG | 7 cut(s) | 56, 404, 1259, 1317, 1422, 1497, 1551 |
| HspAI | GCGC | 2 cut(s) | 1253, 1545 |
| KflI | GGGWCCC | 1 cut(s) | 852 |
| Kzo9I | GATC | 3 cut(s) | 296, 312, 718 |
| LmnI | GCTCC | 2 cut(s) | 734, 1353 |
| Lsp1109I | GCAGC | 3 cut(s) | 545, 806, 1246 |
| LweI | GCATC | 4 cut(s) | 769, 802, 1275, 1547 |
| MaeI | CTAG | 2 cut(s) | 23, 1077 |
| MaeII | ACGT | 4 cut(s) | 475, 1033, 1516, 1538 |
| MaeIII | GTNAC | 2 cut(s) | 1039, 1121 |
| MalI | GATC | 3 cut(s) | 298, 314, 720 |
| MbiI | CCGCTC | 1 cut(s) | 253 |
| MboI | GATC | 3 cut(s) | 296, 312, 718 |
| MboII | GAAGA | 9 cut(s) | 90, 99, 102, 232, 272, 330, 792, 881, 1174 |
| MluCI | AATT | 9 cut(s) | 581, 616, 644, 806, 896, 1013, 1154, 1444, 1510 |
| MlyI | GAGTC | 1 cut(s) | 638 |
| MmeI | TCCRAC | 2 cut(s) | 640, 646 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 2 cut(s) | 585, 1404 |
| MseI | TTAA | 6 cut(s) | 507, 1157, 1238, 1281, 1499, 1570 |
| MslI | CAYNNNNRTG | 1 cut(s) | 697 |
| MspCI | CTTAAG | 1 cut(s) | 506 |
| MspI | CCGG | 1 cut(s) | 1003 |
| MspR9I | CCNGG | 2 cut(s) | 568, 980 |
| Mva1269I | GAATGC | 1 cut(s) | 1198 |
| MvaI | CCWGG | 2 cut(s) | 568, 980 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 162, 883, 1259 |
| NdeII | GATC | 3 cut(s) | 296, 312, 718 |
| NlaIII | CATG | 7 cut(s) | 56, 404, 1259, 1317, 1422, 1497, 1551 |
| NlaIV | GGNNCC | 3 cut(s) | 166, 853, 854 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 5 cut(s) | 404, 1259, 1422, 1497, 1551 |
| PaeI | GCATGC | 1 cut(s) | 1259 |
| PaeR7I | CTCGAG | 2 cut(s) | 634, 711 |
| PaqCI | CACCTGC | 1 cut(s) | 280 |
| PciI | ACATGT | 2 cut(s) | 400, 1493 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 718 |
| PctI | GAATGC | 1 cut(s) | 1198 |
| PdmI | GAANNNNTTC | 2 cut(s) | 585, 1404 |
| PfeI | GAWTC | 5 cut(s) | 554, 575, 586, 689, 1062 |
| PinAI | ACCGGT | 1 cut(s) | 1002 |
| PkrI | GCNGC | 3 cut(s) | 535, 821, 1261 |
| PleI | GAGTC | 1 cut(s) | 637 |
| PpsI | GAGTC | 1 cut(s) | 637 |
| PpuMI | RGGWCCY | 1 cut(s) | 852 |
| PscI | ACATGT | 2 cut(s) | 400, 1493 |
| Psp1406I | AACGTT | 2 cut(s) | 475, 1538 |
| Psp5II | RGGWCCY | 1 cut(s) | 852 |
| Psp6I | CCWGG | 2 cut(s) | 566, 978 |
| PspEI | GGTNACC | 1 cut(s) | 1121 |
| PspGI | CCWGG | 2 cut(s) | 566, 978 |
| PspN4I | GGNNCC | 3 cut(s) | 166, 853, 854 |
| PspPI | GGNCC | 1 cut(s) | 852 |
| PspPPI | RGGWCCY | 1 cut(s) | 852 |
| PspXI | VCTCGAGB | 1 cut(s) | 634 |
| PstI | CTGCAG | 1 cut(s) | 1264 |
| RsaI | GTAC | 3 cut(s) | 1107, 1221, 1477 |
| RsaNI | GTAC | 3 cut(s) | 1106, 1220, 1476 |
| RseI | CAYNNNNRTG | 1 cut(s) | 697 |
| SaqAI | TTAA | 6 cut(s) | 507, 1157, 1238, 1281, 1499, 1570 |
| SatI | GCNGC | 3 cut(s) | 534, 820, 1260 |
| Sau3AI | GATC | 3 cut(s) | 296, 312, 718 |
| Sau96I | GGNCC | 1 cut(s) | 852 |
| ScaI | AGTACT | 1 cut(s) | 1107 |
| SchI | GAGTC | 1 cut(s) | 638 |
| ScrFI | CCNGG | 2 cut(s) | 568, 980 |
| SfaNI | GCATC | 4 cut(s) | 769, 802, 1275, 1547 |
| SfcI | CTRYAG | 2 cut(s) | 936, 1260 |
| Sfr274I | CTCGAG | 2 cut(s) | 634, 711 |
| SinI | GGWCC | 1 cut(s) | 852 |
| SlaI | CTCGAG | 2 cut(s) | 634, 711 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 697 |
| SmlI | CTYRAG | 6 cut(s) | 248, 506, 634, 711, 1148, 1381 |
| SmoI | CTYRAG | 6 cut(s) | 248, 506, 634, 711, 1148, 1381 |
| SphI | GCATGC | 1 cut(s) | 1259 |
| Sse9I | AATT | 9 cut(s) | 581, 616, 644, 806, 896, 1013, 1154, 1444, 1510 |
| SsiI | CCGC | 2 cut(s) | 175, 253 |
| SspI | AATATT | 2 cut(s) | 1404, 1469 |
| SspMI | CTAG | 2 cut(s) | 23, 1077 |
| StyD4I | CCNGG | 2 cut(s) | 566, 978 |
| TaaI | ACNGT | 5 cut(s) | 427, 495, 794, 944, 1127 |
| TaiI | ACGT | 4 cut(s) | 478, 1036, 1519, 1541 |
| TaqI | TCGA | 5 cut(s) | 291, 343, 635, 712, 810 |
| TasI | AATT | 9 cut(s) | 581, 616, 644, 806, 896, 1013, 1154, 1444, 1510 |
| TatI | WGTACW | 2 cut(s) | 1105, 1219 |
| TfiI | GAWTC | 5 cut(s) | 554, 575, 586, 689, 1062 |
| Tru1I | TTAA | 6 cut(s) | 507, 1157, 1238, 1281, 1499, 1570 |
| Tru9I | TTAA | 6 cut(s) | 507, 1157, 1238, 1281, 1499, 1570 |
| TscAI | CASTG | 1 cut(s) | 960 |
| TseI | GCWGC | 3 cut(s) | 533, 819, 1259 |
| TspDTI | ATGAA | 4 cut(s) | 477, 657, 1182, 1302 |
| TspGWI | ACGGA | 2 cut(s) | 298, 721 |
| TspRI | CASTG | 1 cut(s) | 960 |
| Vha464I | CTTAAG | 1 cut(s) | 506 |
| VpaK11BI | GGWCC | 1 cut(s) | 852 |
| XapI | RAATTY | 1 cut(s) | 616 |
| XceI | RCATGY | 5 cut(s) | 404, 1259, 1422, 1497, 1551 |
| XhoI | CTCGAG | 2 cut(s) | 634, 711 |
| XmnI | GAANNNNTTC | 2 cut(s) | 585, 1404 |
| XspI | CTAG | 2 cut(s) | 23, 1077 |
| ZrmI | AGTACT | 1 cut(s) | 1107 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |