Rorug02G0469900

Ubiquitin fusion degradation protein UFD1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0011431
Physical Location & Seq
Forward (+)
60066412 .. 60087562
21151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0469900.1

Sequence Viewer

Length: 1815 bp
ATGATCATGGACTCCACTCCCAACCTACACCAGCTCTTTCTCCCCGTCGTAGAGGCTGAAGAAGAAGAAGAAGAAGAAGTTGATCCCCTTTGTCTTTCTCGGTCAATGGGGTCTATAGACGAGAAGATAGACCTTGAAGCTCATGAGGAGCTCACATTTAGCTCATCAGCAGCCACGGGTGCCCTGCATTTTGAGACGGTTCATTTGCACTCCCGAGCTGATGTGGCATACTCATGGATTTCGAAGAATGTTGGGAGGATAAGAACTCCGAGGAGTCTTTATGTTGTCCTTTTGAATGCAAAGATCACCATGTTGCTACCCTTTGGTCCCTTGGCAATTTGGCTACATATCGTTACTGAAAAGCAGGGATGGGTCCTCTTCTTCAGCTTATTGGGCATGGCACCATTAACAGAGCGTTTAGGATATGTGACTGGGCAACTCGCTTTGCACTCAGAACCGAGAGTTGGGGGACTTATAAATGTCACATTTGTAACTGTACCTGAGATCTTTTCATCACTCTTTGCATTAAGGAAAGGCATGATTAGAGTTGTTCAGAGATCTTTATTGGGGTCGATTTTATTGAATATACTCTTGGTGATTGGATGGGCCTTCTTCACTGGTGGGATCCATCCGTTGCAAGAAAGTTCAAGTTTTCAACGAGGTAGATTTTCATACTCCTGTCGAACTCAACATGCCCTCGTGAACGTTACATTGCCGCCAATGGCTTTAATGGGGATTATGCTTCCAGCTGTGCTTCACTTTACACACTCAGAGGCGCATTTTGGGAAGTCGGAGTTATCCCTTTCACGATTTAGTAGCTGTGTAATGCTAGAGGCATATGCAAGCTTCCTGTTCTTTAAGTTTACAAGTCATCATGATTGTCATAGTCCCATTCATGAGGATGAGGATGAGGAAGGAGTCCAGGATCAAGATTCTTCTCCGGAAATAACTGCTAATGAAGCAATTGGCTGGCTTTCTATCTTAGCTCTGTGGATGTACATTTTGTCTTCATACCTTGTGGAGGCTATACAGGGAGCATCCGACTCGCTCAATATTCCTGTAGCATTTATCAGTGCCATCCTGCTCCCAGTTGTAGGAAATATGTGGTCTATCCTGTTTTCCATGAGAGAAAAACTTGACCTCACGCTTGGAGTTGCTATTGGATTATCTACACAAACATCTATGTTTACAATCCCCTTTTGTGTAATTGTTGGGTGGATAATAGGAAATCCCATGGACTTGAATTTTCAACTCTTTGAGACTGTTATATTGGTTATGGCTGTGCTAGCAGTGGCATTTATGTTGCAGGAAGGGATGTCAAACTACTTCAAAGGATTGATGCTTATCCTGTGTTATCTCATAGTTGCAGCCAGTTTTTTTGTACATGTAGATCCTTCAAATGACTGTGAATTGGACCTCACAATCAAATTAATCCTGATGCTAACTAAACTAACAGTTGGAGTGGCGGCCGTGCATTTGACAATCTATACAGTATCTGCACGCAAAGAAAATCCATATGATCTGCCCGGTACCAAAAAGCTGGGAGATTTCACCCTTTATATAATCAAGTTTGATCCTCTTCAGCTATGGGCCTTCTTCACTGGTGGGATCATCGATTGCAAGAAAGTTCAAGTTTTCAACAAGCAACACGTCCTCGTGAACGTTACATTGCTGCCAATGGCTTTGATGGGGATTATGCTTCCAGCTGTGCTTCACTTTACACACTCAGAGGCGCATTTTGAGAAGTCGGAGTTATCCCTTTCAAGATTTAGTAGCAGTGTAATGCTAGTGGCATATGCAAGCTTCCTGTTATGA

Protein Analysis

604

Amino Acids

67.22

Weight (kDa)

5.51

Isoelectric Point (pI)

41.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_Ca_ex PF01699 124 - 288 4.2e-15 Sodium/calcium exchanger protein
Na_Ca_ex PF01699 322 - 459 2.3e-12 Sodium/calcium exchanger protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15420 AT4G15420
fragaria_vesca FvH4_6g42660
malus_domestica MD09G1071000.v1.1 MD17G1101600.v1.1
prunus_persica Prupe.3G213300_v2.0.a1
pyrus_communis pycom09g03500 pycom17g09600
rosa_chinensis RchiOBHm_Chr2g0158561
rosa_laevigata RLG00000021095
rosa_multiflora Rmu_sc0017496.1_g000003 Rmu_sc0040507.1_g000001 Rmu_sc0040508.1_g000001
rosa_roxburghii Rroxscaffold_2G00091220
rosa_rugosa Rorug02G0469900
rosa_samantha Rh2AG536100 Rh2BG549200 Rh2CG519700 Rh2DG558900
rosa_wichuraiana Rw2G044380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 476
Acc65I GGTACC 1 cut(s) 1529
AccB1I GGYRCC 3 cut(s) 179, 400, 1529
AccIII TCCGGA 1 cut(s) 940
AciI CCGC 2 cut(s) 716, 1466
AclI AACGTT 2 cut(s) 705, 1662
AclWI GGATC 7 cut(s) 77, 619, 632, 933, 1385, 1568, 1616
AcoI YGGCCR 1 cut(s) 1467
AcsI RAATTY 1 cut(s) 1243
AcuI CTGAAG 3 cut(s) 78, 367, 1565
AfaI GTAC 4 cut(s) 498, 998, 1383, 1531
AfiI CCNNNNNNNGG 3 cut(s) 464, 1021, 1094
AflIII ACRYGT 2 cut(s) 1384, 1648
AjiI CACGTC 1 cut(s) 1651
AjnI CCWGG 1 cut(s) 921
AjuI GAANNNNNNNTTGG 4 cut(s) 447, 479, 575, 607
Alw21I GWGCWC 1 cut(s) 153
Alw26I GTCTC 2 cut(s) 188, 1253
AlwI GGATC 7 cut(s) 77, 619, 632, 933, 1385, 1568, 1616
AlwNI CAGNNNCTG 1 cut(s) 1496
Ama87I CYCGRG 1 cut(s) 213
Aor13HI TCCGGA 1 cut(s) 940
AoxI GGCC 3 cut(s) 606, 1467, 1590
ApeKI GCWGC 3 cut(s) 170, 1367, 1672
ApoI RAATTY 1 cut(s) 1243
ArsI GACNNNNNNTTYG 2 cut(s) 187, 219
AseI ATTAAT 1 cut(s) 1430
Asp718I GGTACC 1 cut(s) 1529
AspLEI GCGC 2 cut(s) 778, 1735
AspS9I GGNCC 5 cut(s) 326, 373, 606, 1414, 1590
AsuC2I CCSGG 1 cut(s) 1527
AsuHPI GGTGA 3 cut(s) 298, 607, 1543
AsuII TTCGAA 1 cut(s) 242
AsuNHI GCTAGC 1 cut(s) 1285
AvaI CYCGRG 1 cut(s) 213
AvaII GGWCC 3 cut(s) 326, 373, 1414
BaeGI GKGCMC 1 cut(s) 184
BamHI GGATCC 1 cut(s) 624
BanI GGYRCC 3 cut(s) 179, 400, 1529
BanII GRGCYC 1 cut(s) 153
BauI CACGAG 2 cut(s) 698, 1655
BbsI GAAGAC 1 cut(s) 999
Bbv12I GWGCWC 1 cut(s) 153
BbvI GCAGC 3 cut(s) 182, 1379, 1659
BccI CCATC 5 cut(s) 363, 597, 636, 1085, 1681
BceAI ACGGC 1 cut(s) 1454
BcgI CGANNNNNNTGC 2 cut(s) 1026, 1060
BciT130I CCWGG 1 cut(s) 923
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1527
BcoDI GTCTC 2 cut(s) 188, 1253
BfaI CTAG 3 cut(s) 830, 1286, 1787
BfmI CTRYAG 2 cut(s) 114, 1059
BglII AGATCT 2 cut(s) 504, 557
BisI GCNGC 5 cut(s) 171, 716, 1368, 1467, 1673
BlsI GCNGC 5 cut(s) 172, 717, 1369, 1468, 1674
Bme1390I CCNGG 2 cut(s) 923, 1527
Bme18I GGWCC 3 cut(s) 326, 373, 1414
BmeT110I CYCGRG 1 cut(s) 213
BmgBI CACGTC 1 cut(s) 1651
BmgT120I GGNCC 5 cut(s) 326, 373, 606, 1414, 1590
BmiI GGNNCC 6 cut(s) 181, 328, 374, 402, 626, 1531
BmrFI CCNGG 2 cut(s) 923, 1527
BmrI ACTGGG 2 cut(s) 441, 1082
BmsI GCATC 3 cut(s) 1046, 1329, 1428
BmtI GCTAGC 1 cut(s) 1289
BmuI ACTGGG 2 cut(s) 441, 1082
BpiI GAAGAC 1 cut(s) 999
Bpu14I TTCGAA 1 cut(s) 242
BpuMI CCSGG 1 cut(s) 1527
Bsa29I ATCGAT 1 cut(s) 1614
BsaBI GATNNNNATC 1 cut(s) 1343
BsaJI CCNNGG 4 cut(s) 174, 269, 330, 1233
BsaWI WCCGGW 1 cut(s) 940
Bsc4I CCNNNNNNNGG 3 cut(s) 464, 1021, 1094
Bse1I ACTGG 5 cut(s) 436, 622, 1088, 1371, 1606
Bse3DI GCAATG 2 cut(s) 710, 1667
Bse8I GATNNNNATC 1 cut(s) 1343
BseAI TCCGGA 1 cut(s) 940
BseBI CCWGG 1 cut(s) 923
BseCI ATCGAT 1 cut(s) 1614
BseDI CCNNGG 4 cut(s) 174, 269, 330, 1233
BseGI GGATG 9 cut(s) 374, 608, 628, 907, 913, 999, 1037, 1077, 1320
BseJI GATNNNNATC 1 cut(s) 1343
BseLI CCNNNNNNNGG 3 cut(s) 464, 1021, 1094
BseMI GCAATG 2 cut(s) 710, 1667
BseMII CTCAG 4 cut(s) 465, 492, 783, 1740
BseNI ACTGG 5 cut(s) 436, 622, 1088, 1371, 1606
BseRI GAGGAG 2 cut(s) 161, 286
BseSI GKGCMC 1 cut(s) 184
BseX3I CGGCCG 1 cut(s) 1467
BseXI GCAGC 3 cut(s) 182, 1379, 1659
BseYI CCCAGC 1 cut(s) 1540
BsgI GTGCAG 1 cut(s) 1482
Bsh1285I CGRYCG 1 cut(s) 1470
BshFI GGCC 3 cut(s) 608, 1469, 1592
BshNI GGYRCC 3 cut(s) 179, 400, 1529
BshVI ATCGAT 1 cut(s) 1614
BsiEI CGRYCG 1 cut(s) 1470
BsiHKAI GWGCWC 1 cut(s) 153
BsiHKCI CYCGRG 1 cut(s) 213
BsiSI CCGG 2 cut(s) 941, 1527
BslFI GGGAC 3 cut(s) 312, 483, 873
BslI CCNNNNNNNGG 3 cut(s) 464, 1021, 1094
BsmAI GTCTC 2 cut(s) 188, 1253
BsmBI CGTCTC 1 cut(s) 188
BsmFI GGGAC 3 cut(s) 312, 483, 873
BsmI GAATGC 1 cut(s) 301
BsnI GGCC 3 cut(s) 608, 1469, 1592
BsoBI CYCGRG 1 cut(s) 213
Bsp119I TTCGAA 1 cut(s) 242
Bsp1286I GDGCHC 2 cut(s) 153, 184
Bsp13I TCCGGA 1 cut(s) 940
Bsp1407I TGTACA 2 cut(s) 996, 1381
Bsp19I CCATGG 1 cut(s) 1233
BspACI CCGC 2 cut(s) 716, 1466
BspANI GGCC 3 cut(s) 608, 1469, 1592
BspCNI CTCAG 4 cut(s) 464, 493, 782, 1739
BspDI ATCGAT 1 cut(s) 1614
BspEI TCCGGA 1 cut(s) 940
BspHI TCATGA 3 cut(s) 142, 874, 895
BspLI GGNNCC 6 cut(s) 181, 328, 374, 402, 626, 1531
BspOI GCTAGC 1 cut(s) 1289
BspPI GGATC 7 cut(s) 77, 619, 632, 933, 1385, 1568, 1616
BspT104I TTCGAA 1 cut(s) 242
BspT107I GGYRCC 3 cut(s) 179, 400, 1529
BsrDI GCAATG 2 cut(s) 710, 1667
BsrGI TGTACA 2 cut(s) 996, 1381
BsrI ACTGG 5 cut(s) 436, 622, 1088, 1371, 1606
BssECI CCNNGG 4 cut(s) 174, 269, 330, 1233
BssSI CACGAG 2 cut(s) 698, 1655
BssT1I CCWWGG 2 cut(s) 330, 1233
Bst2BI CACGAG 2 cut(s) 698, 1655
Bst2UI CCWGG 1 cut(s) 923
Bst4CI ACNGT 6 cut(s) 199, 496, 1264, 1406, 1456, 1492
Bst6I CTCTTC 2 cut(s) 383, 1584
BstAUI TGTACA 2 cut(s) 996, 1381
BstBI TTCGAA 1 cut(s) 242
BstC8I GCNNGC 5 cut(s) 844, 971, 1287, 1501, 1801
BstDEI CTNAG 5 cut(s) 451, 501, 769, 982, 1726
BstDSI CCRYGG 2 cut(s) 174, 1233
BstENI CCTNNNNNAGG 1 cut(s) 1019
BstF5I GGATG 9 cut(s) 374, 608, 628, 907, 913, 999, 1037, 1077, 1320
BstHHI GCGC 2 cut(s) 778, 1735
BstMAI GTCTC 2 cut(s) 188, 1253
BstMCI CGRYCG 1 cut(s) 1470
BstMWI GCNNNNNNNGC 5 cut(s) 179, 224, 393, 959, 1286
BstNI CCWGG 1 cut(s) 923
BstNSI RCATGY 2 cut(s) 695, 1388
BstSCI CCNGG 2 cut(s) 921, 1525
BstSFI CTRYAG 2 cut(s) 114, 1059
BstSLI GKGCMC 1 cut(s) 184
BstV1I GCAGC 3 cut(s) 182, 1379, 1659
BstV2I GAAGAC 1 cut(s) 999
BstX2I RGATCY 4 cut(s) 504, 557, 624, 1390
BstXI CCANNNNNNTGG 1 cut(s) 1540
BstYI RGATCY 4 cut(s) 504, 557, 624, 1390
BstZI CGGCCG 1 cut(s) 1467
Bsu15I ATCGAT 1 cut(s) 1614
BsuRI GGCC 3 cut(s) 608, 1469, 1592
BsuTUI ATCGAT 1 cut(s) 1614
BtgI CCRYGG 2 cut(s) 174, 1233
BtrI CACGTC 1 cut(s) 1651
BtsCI GGATG 9 cut(s) 374, 608, 628, 907, 913, 999, 1037, 1077, 1320
BtsI GCAGTG 2 cut(s) 1296, 1783
BtsIMutI CAGTG 5 cut(s) 615, 1078, 1296, 1599, 1783
Cac8I GCNNGC 5 cut(s) 844, 971, 1287, 1501, 1801
CaiI CAGNNNCTG 1 cut(s) 1496
CciI TCATGA 3 cut(s) 142, 874, 895
CfoI GCGC 2 cut(s) 778, 1735
Cfr13I GGNCC 5 cut(s) 326, 373, 606, 1414, 1590
ClaI ATCGAT 1 cut(s) 1614
Csp6I GTAC 4 cut(s) 497, 997, 1382, 1530
CviQI GTAC 4 cut(s) 497, 997, 1382, 1530
DdeI CTNAG 5 cut(s) 451, 501, 769, 982, 1726
EaeI YGGCCR 1 cut(s) 1467
EagI CGGCCG 1 cut(s) 1467
Eam1104I CTCTTC 2 cut(s) 383, 1584
EarI CTCTTC 2 cut(s) 383, 1584
Ecl136II GAGCTC 1 cut(s) 151
EclXI CGGCCG 1 cut(s) 1467
Eco130I CCWWGG 2 cut(s) 330, 1233
Eco24I GRGCYC 1 cut(s) 153
Eco47I GGWCC 3 cut(s) 326, 373, 1414
Eco52I CGGCCG 1 cut(s) 1467
Eco53kI GAGCTC 1 cut(s) 151
Eco57I CTGAAG 3 cut(s) 78, 367, 1565
Eco88I CYCGRG 1 cut(s) 213
EcoICRI GAGCTC 1 cut(s) 151
EcoNI CCTNNNNNAGG 1 cut(s) 1019
EcoO109I RGGNCCY 1 cut(s) 373
EcoRII CCWGG 1 cut(s) 921
EcoT14I CCWWGG 2 cut(s) 330, 1233
EcoT38I GRGCYC 1 cut(s) 153
ErhI CCWWGG 2 cut(s) 330, 1233
Esp3I CGTCTC 1 cut(s) 188
FaqI GGGAC 3 cut(s) 312, 483, 873
FauNDI CATATG 3 cut(s) 838, 1516, 1795
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 5 cut(s) 171, 716, 1368, 1467, 1673
FokI GGATG 9 cut(s) 381, 615, 615, 914, 920, 1006, 1024, 1064, 1327
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 5 cut(s) 171, 716, 1368, 1467, 1673
FspBI CTAG 3 cut(s) 830, 1286, 1787
GlaI GCGC 2 cut(s) 777, 1734
GluI GCNGC 5 cut(s) 171, 716, 1368, 1467, 1673
GsaI CCCAGC 1 cut(s) 1544
HaeIII GGCC 3 cut(s) 608, 1469, 1592
HapII CCGG 2 cut(s) 941, 1527
HhaI GCGC 2 cut(s) 778, 1735
Hin6I GCGC 2 cut(s) 776, 1733
HinP1I GCGC 2 cut(s) 776, 1733
HindIII AAGCTT 2 cut(s) 844, 1801
HinfI GANTC 5 cut(s) 11, 274, 918, 932, 1043
HpaII CCGG 2 cut(s) 941, 1527
HphI GGTGA 3 cut(s) 298, 607, 1543
Hpy166II GTNNAC 4 cut(s) 703, 864, 1188, 1660
Hpy188I TCNGA 8 cut(s) 270, 454, 555, 772, 793, 1042, 1729, 1750
Hpy8I GTNNAC 4 cut(s) 703, 864, 1188, 1660
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 5 cut(s) 619, 908, 1304, 1404, 1603
HpyCH4III ACNGT 6 cut(s) 199, 496, 1264, 1406, 1456, 1492
HpyCH4IV ACGT 3 cut(s) 705, 1650, 1662
HpyF10VI GCNNNNNNNGC 5 cut(s) 179, 224, 393, 959, 1286
HpyF3I CTNAG 5 cut(s) 451, 501, 769, 982, 1726
HpySE526I ACGT 3 cut(s) 705, 1650, 1662
HspAI GCGC 2 cut(s) 776, 1733
Kpn2I TCCGGA 1 cut(s) 940
KpnI GGTACC 1 cut(s) 1533
Ksp22I TGATCA 1 cut(s) 3
LmnI GCTCC 3 cut(s) 148, 1034, 1089
Lsp1109I GCAGC 3 cut(s) 182, 1379, 1659
LweI GCATC 3 cut(s) 1046, 1329, 1428
MaeI CTAG 3 cut(s) 830, 1286, 1787
MaeII ACGT 3 cut(s) 705, 1650, 1662
MaeIII GTNAC 6 cut(s) 352, 427, 481, 490, 706, 1663
MfeI CAATTG 1 cut(s) 963
MflI RGATCY 4 cut(s) 504, 557, 624, 1390
MhlI GDGCHC 2 cut(s) 153, 184
MluCI AATT 6 cut(s) 336, 963, 1206, 1243, 1409, 1427
MlyI GAGTC 4 cut(s) 5, 283, 927, 1037
MmeI TCCRAC 4 cut(s) 771, 1065, 1438, 1728
MroI TCCGGA 1 cut(s) 940
MseI TTAA 5 cut(s) 407, 527, 728, 858, 1430
MslI CAYNNNNRTG 2 cut(s) 232, 900
MspA1I CMGCKG 2 cut(s) 749, 1706
MspI CCGG 2 cut(s) 941, 1527
MspR9I CCNGG 2 cut(s) 923, 1527
MunI CAATTG 1 cut(s) 963
Mva1269I GAATGC 1 cut(s) 301
MvaI CCWGG 1 cut(s) 923
MwoI GCNNNNNNNGC 5 cut(s) 179, 224, 393, 959, 1286
NciI CCSGG 1 cut(s) 1527
NcoI CCATGG 1 cut(s) 1233
NdeI CATATG 3 cut(s) 838, 1516, 1795
NheI GCTAGC 1 cut(s) 1285
NlaIV GGNNCC 6 cut(s) 181, 328, 374, 402, 626, 1531
NmuCI GTSAC 2 cut(s) 427, 481
NspI RCATGY 2 cut(s) 695, 1388
NspV TTCGAA 1 cut(s) 242
PagI TCATGA 3 cut(s) 142, 874, 895
PciI ACATGT 1 cut(s) 1384
PctI GAATGC 1 cut(s) 301
PfeI GAWTC 1 cut(s) 932
PfoI TCCNGGA 1 cut(s) 921
PkrI GCNGC 5 cut(s) 172, 717, 1369, 1468, 1674
PleI GAGTC 4 cut(s) 5, 282, 926, 1037
PpsI GAGTC 4 cut(s) 5, 282, 926, 1037
PpuMI RGGWCCY 1 cut(s) 373
PscI ACATGT 1 cut(s) 1384
PshBI ATTAAT 1 cut(s) 1430
PsiI TTATAA 1 cut(s) 476
Psp124BI GAGCTC 1 cut(s) 153
Psp1406I AACGTT 2 cut(s) 705, 1662
Psp5II RGGWCCY 1 cut(s) 373
Psp6I CCWGG 1 cut(s) 921
PspFI CCCAGC 1 cut(s) 1540
PspGI CCWGG 1 cut(s) 921
PspN4I GGNNCC 6 cut(s) 181, 328, 374, 402, 626, 1531
PspPI GGNCC 5 cut(s) 326, 373, 606, 1414, 1590
PspPPI RGGWCCY 1 cut(s) 373
PstNI CAGNNNCTG 1 cut(s) 1496
PsuI RGATCY 4 cut(s) 504, 557, 624, 1390
PvuII CAGCTG 2 cut(s) 749, 1706
RsaI GTAC 4 cut(s) 498, 998, 1383, 1531
RsaNI GTAC 4 cut(s) 497, 997, 1382, 1530
RseI CAYNNNNRTG 2 cut(s) 232, 900
SacI GAGCTC 1 cut(s) 153
SaqAI TTAA 5 cut(s) 407, 527, 728, 858, 1430
SatI GCNGC 5 cut(s) 171, 716, 1368, 1467, 1673
Sau96I GGNCC 5 cut(s) 326, 373, 606, 1414, 1590
SchI GAGTC 4 cut(s) 5, 283, 927, 1037
ScrFI CCNGG 2 cut(s) 923, 1527
SduI GDGCHC 2 cut(s) 153, 184
SfaNI GCATC 3 cut(s) 1046, 1329, 1428
SfcI CTRYAG 2 cut(s) 114, 1059
SfuI TTCGAA 1 cut(s) 242
SinI GGWCC 3 cut(s) 326, 373, 1414
SmiMI CAYNNNNRTG 2 cut(s) 232, 900
Sse9I AATT 6 cut(s) 336, 963, 1206, 1243, 1409, 1427
SsiI CCGC 2 cut(s) 716, 1466
SspI AATATT 1 cut(s) 1054
SspMI CTAG 3 cut(s) 830, 1286, 1787
SstI GAGCTC 1 cut(s) 153
StyD4I CCNGG 2 cut(s) 921, 1525
StyI CCWWGG 2 cut(s) 330, 1233
TaaI ACNGT 6 cut(s) 199, 496, 1264, 1406, 1456, 1492
TaiI ACGT 3 cut(s) 708, 1653, 1665
TaqI TCGA 4 cut(s) 242, 572, 682, 1614
TaqII GACCGA 1 cut(s) 90
TasI AATT 6 cut(s) 336, 963, 1206, 1243, 1409, 1427
TatI WGTACW 2 cut(s) 996, 1381
TauI GCSGC 2 cut(s) 718, 1469
TfiI GAWTC 1 cut(s) 932
Tru1I TTAA 5 cut(s) 407, 527, 728, 858, 1430
Tru9I TTAA 5 cut(s) 407, 527, 728, 858, 1430
TscAI CASTG 5 cut(s) 622, 1078, 1296, 1606, 1783
TseFI GTSAC 2 cut(s) 427, 481
TseI GCWGC 3 cut(s) 170, 1367, 1672
Tsp45I GTSAC 2 cut(s) 427, 481
TspDTI ATGAA 6 cut(s) 191, 501, 660, 884, 972, 999
TspGWI ACGGA 1 cut(s) 621
TspRI CASTG 5 cut(s) 622, 1078, 1296, 1606, 1783
VpaK11BI GGWCC 3 cut(s) 326, 373, 1414
VspI ATTAAT 1 cut(s) 1430
XagI CCTNNNNNAGG 1 cut(s) 1019
XapI RAATTY 1 cut(s) 1243
XceI RCATGY 2 cut(s) 695, 1388
XspI CTAG 3 cut(s) 830, 1286, 1787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.