mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G52490 |
| malus_domestica | MD11G1270700.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0166961 |
| rosa_laevigata | RLG00000021684 |
| rosa_multiflora | Rmu_sc0002735.1_g000024 Rmu_sc0005344.1_g000013 |
| rosa_rugosa | Rorug02G0526900 |
| rosa_samantha | Rh2AG593800 Rh2BG605300 Rh2CG576200 Rh2DG616800 |
| rosa_wichuraiana | Rw2G049440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 344 |
| AccB1I | GGYRCC | 3 cut(s) | 5, 614, 734 |
| AccI | GTMKAC | 1 cut(s) | 1128 |
| AclWI | GGATC | 5 cut(s) | 568, 688, 802, 1106, 1119 |
| AcoI | YGGCCR | 2 cut(s) | 829, 1027 |
| AluBI | AGCT | 9 cut(s) | 104, 293, 377, 401, 497, 521, 641, 761, 1097 |
| AluI | AGCT | 9 cut(s) | 104, 293, 377, 401, 497, 521, 641, 761, 1097 |
| Alw21I | GWGCWC | 1 cut(s) | 45 |
| AlwI | GGATC | 5 cut(s) | 568, 688, 802, 1106, 1119 |
| AoxI | GGCC | 3 cut(s) | 829, 949, 1027 |
| AsuHPI | GGTGA | 1 cut(s) | 95 |
| BalI | TGGCCA | 2 cut(s) | 831, 1029 |
| BamHI | GGATCC | 1 cut(s) | 1111 |
| BanI | GGYRCC | 3 cut(s) | 5, 614, 734 |
| BbsI | GAAGAC | 3 cut(s) | 18, 26, 46 |
| Bbv12I | GWGCWC | 1 cut(s) | 45 |
| BccI | CCATC | 1 cut(s) | 123 |
| BfaI | CTAG | 3 cut(s) | 105, 539, 659 |
| BfuAI | ACCTGC | 1 cut(s) | 344 |
| BisI | GCNGC | 3 cut(s) | 139, 505, 856 |
| BlsI | GCNGC | 3 cut(s) | 140, 506, 857 |
| BmiI | GGNNCC | 5 cut(s) | 7, 268, 616, 736, 1113 |
| BpiI | GAAGAC | 3 cut(s) | 18, 26, 46 |
| BpmI | CTGGAG | 4 cut(s) | 315, 399, 543, 705 |
| Bpu10I | CCTNAGC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 3 cut(s) | 832, 952, 1030 |
| BsaWI | WCCGGW | 1 cut(s) | 1114 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 288, 318, 372, 402, 966, 996 |
| Bse118I | RCCGGY | 2 cut(s) | 617, 737 |
| Bse1I | ACTGG | 1 cut(s) | 58 |
| BseDI | CCNNGG | 3 cut(s) | 832, 952, 1030 |
| BseGI | GGATG | 1 cut(s) | 134 |
| BseMII | CTCAG | 1 cut(s) | 92 |
| BseNI | ACTGG | 1 cut(s) | 58 |
| BseYI | CCCAGC | 1 cut(s) | 497 |
| BsgI | GTGCAG | 1 cut(s) | 912 |
| BshFI | GGCC | 3 cut(s) | 831, 951, 1029 |
| BshNI | GGYRCC | 3 cut(s) | 5, 614, 734 |
| BsiHKAI | GWGCWC | 1 cut(s) | 45 |
| BsiSI | CCGG | 4 cut(s) | 270, 618, 738, 1115 |
| BsnI | GGCC | 3 cut(s) | 831, 951, 1029 |
| Bsp1286I | GDGCHC | 1 cut(s) | 45 |
| Bsp143I | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| BspANI | GGCC | 3 cut(s) | 831, 951, 1029 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspLI | GGNNCC | 5 cut(s) | 7, 268, 616, 736, 1113 |
| BspMI | ACCTGC | 1 cut(s) | 344 |
| BspPI | GGATC | 5 cut(s) | 568, 688, 802, 1106, 1119 |
| BspT107I | GGYRCC | 3 cut(s) | 5, 614, 734 |
| BsrFI | RCCGGY | 2 cut(s) | 617, 737 |
| BsrI | ACTGG | 1 cut(s) | 58 |
| BssAI | RCCGGY | 2 cut(s) | 617, 737 |
| BssECI | CCNNGG | 3 cut(s) | 832, 952, 1030 |
| BssMI | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| BssT1I | CCWWGG | 2 cut(s) | 832, 952 |
| BstC8I | GCNNGC | 5 cut(s) | 403, 619, 739, 853, 1099 |
| BstDEI | CTNAG | 1 cut(s) | 78 |
| BstDSI | CCRYGG | 1 cut(s) | 1030 |
| BstF5I | GGATG | 1 cut(s) | 134 |
| BstKTI | GATC | 4 cut(s) | 563, 683, 797, 1114 |
| BstMBI | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 74, 879 |
| BstV2I | GAAGAC | 3 cut(s) | 18, 26, 46 |
| BstX2I | RGATCY | 2 cut(s) | 680, 1111 |
| BstYI | RGATCY | 2 cut(s) | 680, 1111 |
| BsuRI | GGCC | 3 cut(s) | 831, 951, 1029 |
| BtgI | CCRYGG | 1 cut(s) | 1030 |
| BtsCI | GGATG | 1 cut(s) | 134 |
| BtsI | GCAGTG | 1 cut(s) | 1108 |
| BtsIMutI | CAGTG | 1 cut(s) | 1108 |
| BveI | ACCTGC | 1 cut(s) | 344 |
| Cac8I | GCNNGC | 5 cut(s) | 403, 619, 739, 853, 1099 |
| Cfr10I | RCCGGY | 2 cut(s) | 617, 737 |
| CviAII | CATG | 3 cut(s) | 257, 359, 719 |
| DdeI | CTNAG | 1 cut(s) | 78 |
| DpnI | GATC | 4 cut(s) | 562, 682, 796, 1113 |
| DpnII | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| EaeI | YGGCCR | 2 cut(s) | 829, 1027 |
| EciI | GGCGGA | 7 cut(s) | 264, 420, 690, 804, 873, 897, 972 |
| Eco130I | CCWWGG | 2 cut(s) | 832, 952 |
| EcoT14I | CCWWGG | 2 cut(s) | 832, 952 |
| ErhI | CCWWGG | 2 cut(s) | 832, 952 |
| FaeI | CATG | 3 cut(s) | 260, 362, 722 |
| FaiI | YATR | 4 cut(s) | 71, 258, 360, 720 |
| FatI | CATG | 3 cut(s) | 256, 358, 718 |
| FblI | GTMKAC | 1 cut(s) | 1128 |
| Fnu4HI | GCNGC | 3 cut(s) | 139, 505, 856 |
| FokI | GGATG | 1 cut(s) | 141 |
| Fsp4HI | GCNGC | 3 cut(s) | 139, 505, 856 |
| FspBI | CTAG | 3 cut(s) | 105, 539, 659 |
| GluI | GCNGC | 3 cut(s) | 139, 505, 856 |
| GsaI | CCCAGC | 1 cut(s) | 501 |
| GsuI | CTGGAG | 4 cut(s) | 315, 399, 543, 705 |
| HaeIII | GGCC | 3 cut(s) | 831, 951, 1029 |
| HapII | CCGG | 4 cut(s) | 270, 618, 738, 1115 |
| Hin1II | CATG | 3 cut(s) | 260, 362, 722 |
| HincII | GTYRAC | 1 cut(s) | 97 |
| HindII | GTYRAC | 1 cut(s) | 97 |
| HinfI | GANTC | 2 cut(s) | 31, 1041 |
| HpaII | CCGG | 4 cut(s) | 270, 618, 738, 1115 |
| HphI | GGTGA | 1 cut(s) | 95 |
| Hpy166II | GTNNAC | 2 cut(s) | 97, 1129 |
| Hpy188I | TCNGA | 2 cut(s) | 15, 1046 |
| Hpy188III | TCNNGA | 5 cut(s) | 113, 564, 684, 714, 798 |
| Hpy8I | GTNNAC | 2 cut(s) | 97, 1129 |
| HpyAV | CCTTC | 1 cut(s) | 1101 |
| HpyCH4V | TGCA | 2 cut(s) | 48, 893 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 74, 879 |
| HpyF3I | CTNAG | 1 cut(s) | 78 |
| Hsp92II | CATG | 3 cut(s) | 260, 362, 722 |
| KroI | GCCGGC | 2 cut(s) | 617, 737 |
| KroNI | GCCGGC | 2 cut(s) | 619, 739 |
| Kzo9I | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| MaeI | CTAG | 3 cut(s) | 105, 539, 659 |
| MalI | GATC | 4 cut(s) | 562, 682, 796, 1113 |
| MboI | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| MboII | GAAGA | 3 cut(s) | 18, 26, 46 |
| MflI | RGATCY | 2 cut(s) | 680, 1111 |
| MhlI | GDGCHC | 1 cut(s) | 45 |
| MlsI | TGGCCA | 2 cut(s) | 831, 1029 |
| MluCI | AATT | 2 cut(s) | 1047, 1053 |
| MluNI | TGGCCA | 2 cut(s) | 831, 1029 |
| MlyI | GAGTC | 1 cut(s) | 40 |
| MmeI | TCCRAC | 2 cut(s) | 208, 946 |
| Mox20I | TGGCCA | 2 cut(s) | 831, 1029 |
| MroNI | GCCGGC | 2 cut(s) | 617, 737 |
| MscI | TGGCCA | 2 cut(s) | 831, 1029 |
| MseI | TTAA | 1 cut(s) | 1134 |
| Msp20I | TGGCCA | 2 cut(s) | 831, 1029 |
| MspA1I | CMGCKG | 1 cut(s) | 141 |
| MspI | CCGG | 4 cut(s) | 270, 618, 738, 1115 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 74, 879 |
| NaeI | GCCGGC | 2 cut(s) | 619, 739 |
| NdeII | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| NgoMIV | GCCGGC | 2 cut(s) | 617, 737 |
| NlaIII | CATG | 3 cut(s) | 260, 362, 722 |
| NlaIV | GGNNCC | 5 cut(s) | 7, 268, 616, 736, 1113 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 157 |
| PdiI | GCCGGC | 2 cut(s) | 619, 739 |
| PfeI | GAWTC | 1 cut(s) | 1041 |
| PkrI | GCNGC | 3 cut(s) | 140, 506, 857 |
| PleI | GAGTC | 1 cut(s) | 39 |
| PpsI | GAGTC | 1 cut(s) | 39 |
| PspFI | CCCAGC | 1 cut(s) | 497 |
| PspN4I | GGNNCC | 5 cut(s) | 7, 268, 616, 736, 1113 |
| PsuI | RGATCY | 2 cut(s) | 680, 1111 |
| SaqAI | TTAA | 1 cut(s) | 1134 |
| SatI | GCNGC | 3 cut(s) | 139, 505, 856 |
| Sau3AI | GATC | 4 cut(s) | 560, 680, 794, 1111 |
| SchI | GAGTC | 1 cut(s) | 40 |
| SduI | GDGCHC | 1 cut(s) | 45 |
| Sse9I | AATT | 2 cut(s) | 1047, 1053 |
| SspMI | CTAG | 3 cut(s) | 105, 539, 659 |
| StyI | CCWWGG | 2 cut(s) | 832, 952 |
| TaqI | TCGA | 1 cut(s) | 29 |
| TasI | AATT | 2 cut(s) | 1047, 1053 |
| TauI | GCSGC | 3 cut(s) | 141, 507, 858 |
| TfiI | GAWTC | 1 cut(s) | 1041 |
| Tru1I | TTAA | 1 cut(s) | 1134 |
| Tru9I | TTAA | 1 cut(s) | 1134 |
| TscAI | CASTG | 1 cut(s) | 1108 |
| TspGWI | ACGGA | 1 cut(s) | 1047 |
| TspRI | CASTG | 1 cut(s) | 1108 |
| XmiI | GTMKAC | 1 cut(s) | 1128 |
| XspI | CTAG | 3 cut(s) | 105, 539, 659 |