Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0016676

Physical Location & Seq

Genomic Coordinates Forward (+)

66657071 .. 66659757

Gene Structure 2687 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0536900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGTGGTACAACGCCGAAATTTCACCACCGGGGACGAGAAATACCTTGATTCCATCGGCGGTGGCTCAGCCCTGTCTTCCGTCACCGGCCGATCTTGAAGAGAAAGCCCGCAGATGGCAGCAGCTTTCCTCCCGCAAGTGGTCCAATCGCCACGGCGAACGGCGCGTCGTCGATTCACAAAAACAGGACATGCCTCCGGAGCATGTGAGGAAGATCGTGAAAGATCACGGCGACATGTCGTCGAAGAAGTACCGGCACGACAAGCGGGTCTACCTGGGAGCTCTCAAGTTCGTTCCTCACGCCGTGTACAAGCTCCTCGAGAATATGCCGATGCCGTGGGAGCAGCTGGAGCTTGATGCCGAAGAGGATGCCGCTGTGTATAAGTGGTTTTATGACCATAAACCTCTAATGAAGACAAAGCTGATCAACGGCCCGACCTACCGGAAGTGGCAGCTCTCGGTGCCGATTATGGAAGCCCTTTACCGGCTTTCAGGACAGGTAATTTCCGATTTGACTGATCGGAACTATTTTTATTTGTTTGATAAGGAGTCGTTTCTGACAGCCAAGGCATTGAATATGTGTATACCAGGTGGGCCGAAATTCGAGCCCTTGTTTAGGGATATGGAGCAAGGGGAGGAGGATTGGAATGAGTTTAATGACATAAACAAGCTCATTATTCGGTATCCGCTGAGATCAGAGTACAAAATTGCATTCCCTAATCTTTACAACAACAGGCCAAGGAAGGTAAAGCTCTCTGTTTATCACACACCAATGGTTATGCATATTAAAACTGAGGATCCTGATCTGCCTGCATTTTATTATGATCCATTGCTAAACCCAATACCCGGCACTAACAGGAATAGTTATGATAATTGTGAGGAAGATGGTGATTTTGTTTTGCCTGAAGGGGTGGAGCCTCTTTTGAGTCATACTCAGCTTTATACTGACACCACTGCTGCTGGGATTTTCCTGTATTTTGCCCCACGCCCTTTTCACTTGAGGTCTGGTCAGACTCGTCGCGCAGAGGATATACCTCTTGTGTCAGAGTGGTTTAAGGAGCATTGTCCTCGATCATATCCTGTTAAGGTTCGAGTCAGCTATCAGAAGTTGTTGAAATTGTTTGTGTTGAATGAGCTGCATCGTAGGCCTCCCAAGGCACAAAAGAAGAAGGACTTGTTTCGGTCTCTTCAGGCTACCAAGTTTTTCCAAACTACTGAGCTTGATTGGGTTGAAGCGGGTCTTCAACTCTGTAGGCAGGGTCATAACATGCTAAATCTGCTGATACATAGGAAAGGTCTGGACTATCTTCACCTTGATTATAATTTTAATCTCAAGCCTGTGAAAACCCTGACAACAAAAGAGCGTAAGAAATCTCGGTTTGGTAATTCTTTTCATCTGTTGCGTGAAATCTTGCGGTTAACAAAGCTTGTAGTTGATGCCCAGGTCCAGTTCCGTTTGGGTAATATTGATGCCTTTCAATTGGCTGATGGTCTGCAGTACATATTTTCTCATGTTGGTCAGTTAACTGGAATGTACCGTTACAAGTATAGGTTGATGCGGCAGATTAGAATGAACAAAGATTTGAAGCACTTGATTTACTACCGTTTCAATACTGGGCCGGTCGGGAAAGGGCCGGGATGTGGATTCTGGGCACCAATGTGGAGGGTGTGGTTGTCCTTCCTTCGTGGCATGGTCCCTCTTCTGGAACAATGGTTGGGAAATTTACTTGCTAGACAATTTGAAGGGCGCCATTCTGTGGCAAAGACAGTAACTAAGCAGCGTGTTGAAAGCAATTTCGACTTGGAGTTTCGAGCAGATATCTTGAAAGATATTCTGGATGCCATGCCAGTGGGCATGAAGCAAAATAAGGCGAAAACAATTATGCAGCATCTCAGTGAGGCATGGCGTTGTTGGAAAGCAAATATTCCTTGGAAGGTTCCTGGTATGCCTGCTCCGGTTGAGAATATAATTCTTCGTTATGTCAAGTCAAAGGCAGATTGGTGGACACATGGTGCTCATTATAACCGTGAACGTATTAGAAGAGGTGCTACAGTGGATAAGACAGTTTGTCGAAAGAATCTTGGAAGATTAACTCGCCTTTGGCTAAAGGGAGAGCAGGAGCGACAGCACAATTATCTCAAAGATGGTCCATATATTTCACCAGAAGAAGCAGTAGCAATTTACTCAACAACTGTGCATTGGTTGGAGTCAAGAAATTTCCAACATATTCCATTTCCCCCTTTGTCGTATAAGCATGATACCAAGCTACTTATCCTTGCTCTGGAGAGGTTGAAGGAATCTTATACTGCGGCAGTAAAATTGAACCAGCATCAAAGAGAGGAGTTGGGTCTCATTGAACAAGCCTATGATAACCCCCATGAGGCATTGATAAGGATAAAACGTCACTTGATCTCACAGCGTGCCTTCAAAGACGTGAGCATAGAGTTCATGGATCTGTACAGCCATCATATTCCAGTTTTTGAGATTGACCCTCTTGAGAAGATTACAGACAGCGTGCCTTCAAAGACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009914 GO:0009926 GO:0009966 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0022857 GO:0023051 GO:0032501 GO:0032502 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046907 GO:0048229 GO:0048583 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0060918 GO:0060919 GO:0065007 GO:0065008 GO:0071944 GO:0080161 GO:0080162

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

843

Amino Acids

99.17

Weight (kDa)

9.48

Isoelectric Point (pI)

46.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRO8NT	PF08082	61 - 116	2.6e-28	PRO8NT (NUC069), PrP8 N-terminal domain
PROCN	PF08083	316 - 719	3.6e-225	PROCN (NUC071) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15100
fragaria_vesca	FvH4_6g49240
malus_domestica	MD09G1047300.v1.1
prunus_persica	Prupe.3G271700_v2.0.a1
pyrus_communis	pycom111g03810
rosa_chinensis	RchiOBHm_Chr2g0169101
rosa_laevigata	RLG00000021834
rosa_roxburghii	Rroxscaffold_2G00082450
rosa_rugosa	Rorug02G0536900
rosa_samantha	Rh2AG608800 Rh2BG621700 Rh2CG590400 Rh2DG632300
rosa_wichuraiana	Rw2G050480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1320, 2022
AasI	GACNNNNNNGTC	1 cut(s)	266
AccB1I	GGYRCC	3 cut(s)	460, 1651, 1746
AccB7I	CCANNNNNTGG	1 cut(s)	1756
AccI	GTMKAC	2 cut(s)	270, 583
AccII	CGCG	2 cut(s)	165, 1020
AccIII	TCCGGA	1 cut(s)	196
AclWI	GGATC	4 cut(s)	791, 804, 818, 2460
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	4 cut(s)	18, 599, 1720, 2215
AcuI	CTGAAG	2 cut(s)	924, 1172
AcyI	GRCGYC	1 cut(s)	1747
AdeI	CACNNNGTG	3 cut(s)	304, 2012, 2420
AfaI	GTAC	7 cut(s)	8, 251, 308, 701, 1499, 1535, 2459
AflIII	ACRYGT	1 cut(s)	234
AhdI	GACNNNNNGTC	2 cut(s)	238, 2067
AjiI	CACGTC	2 cut(s)	2434, 2529
AjnI	CCWGG	4 cut(s)	273, 586, 1440, 1939
AleI	CACNNNNGTG	1 cut(s)	1657
Alw21I	GWGCWC	2 cut(s)	283, 2017
Alw26I	GTCTC	2 cut(s)	1188, 2354
AlwI	GGATC	4 cut(s)	791, 804, 818, 2460
Ama87I	CYCGRG	1 cut(s)	317
Aor13HI	TCCGGA	1 cut(s)	196
AoxI	GGCC	7 cut(s)	87, 430, 593, 734, 1145, 1616, 1631
ApeKI	GCWGC	8 cut(s)	118, 121, 343, 451, 956, 1135, 1777, 1885
ApoI	RAATTY	4 cut(s)	18, 599, 1720, 2215
ArsI	GACNNNNNNTTYG	2 cut(s)	150, 182
AspLEI	GCGC	3 cut(s)	165, 1022, 1749
AspS9I	GGNCC	8 cut(s)	141, 431, 593, 1444, 1616, 1631, 1693, 2147
AsuC2I	CCSGG	3 cut(s)	30, 846, 1635
AsuHPI	GGTGA	5 cut(s)	15, 75, 899, 1301, 2151
AvaI	CYCGRG	1 cut(s)	317
AvaII	GGWCC	4 cut(s)	141, 1444, 1693, 2147
BaeGI	GKGCMC	1 cut(s)	1654
BamHI	GGATCC	1 cut(s)	796
BanI	GGYRCC	3 cut(s)	460, 1651, 1746
BanII	GRGCYC	2 cut(s)	283, 609
BarI	GAAGNNNNNNTAC	2 cut(s)	2032, 2064
BbsI	GAAGAC	3 cut(s)	68, 419, 1232
Bbv12I	GWGCWC	2 cut(s)	283, 2017
BbvI	GCAGC	8 cut(s)	130, 133, 355, 463, 943, 1122, 1789, 1897
BccI	CCATC	6 cut(s)	61, 108, 878, 1481, 2138, 2472
BceAI	ACGGC	6 cut(s)	169, 176, 244, 287, 319, 445
BcgI	CGANNNNNNTGC	4 cut(s)	350, 384, 1049, 1083
BciT130I	CCWGG	4 cut(s)	275, 588, 1442, 1941
BciVI	GTATCC	1 cut(s)	693
BclI	TGATCA	1 cut(s)	423
BcnI	CCSGG	3 cut(s)	30, 846, 1635
BcoDI	GTCTC	2 cut(s)	1188, 2354
BfaI	CTAG	1 cut(s)	1731
BfmI	CTRYAG	3 cut(s)	1249, 1493, 2049
BfoI	RGCGCY	1 cut(s)	1750
BfuI	GTATCC	1 cut(s)	693
BlpI	GCTNAGC	1 cut(s)	66
Bme1390I	CCNGG	7 cut(s)	30, 275, 588, 846, 1442, 1635, 1941
Bme18I	GGWCC	4 cut(s)	141, 1444, 1693, 2147
BmeRI	GACNNNNNGTC	2 cut(s)	238, 2067
BmeT110I	CYCGRG	1 cut(s)	317
BmgBI	CACGTC	2 cut(s)	2434, 2529
BmgT120I	GGNCC	8 cut(s)	141, 431, 593, 1444, 1616, 1631, 1693, 2147
BmiI	GGNNCC	7 cut(s)	462, 798, 915, 1653, 1695, 1748, 1938
BmrFI	CCNGG	7 cut(s)	30, 275, 588, 846, 1442, 1635, 1941
BmrI	ACTGGG	1 cut(s)	1623
BmuI	ACTGGG	1 cut(s)	1623
BpiI	GAAGAC	3 cut(s)	68, 419, 1232
BplI	GAGNNNNNCTC	2 cut(s)	916, 948
BpmI	CTGGAG	2 cut(s)	368, 2303
Bpu1102I	GCTNAGC	1 cut(s)	66
BpuEI	CTTGAG	4 cut(s)	269, 1018, 1316, 2516
BpuMI	CCSGG	3 cut(s)	30, 846, 1635
BsaBI	GATNNNNATC	1 cut(s)	801
BsaHI	GRCGYC	1 cut(s)	1747
BsaI	GGTCTC	2 cut(s)	1188, 2354
BsaJI	CCNNGG	9 cut(s)	29, 151, 274, 335, 564, 737, 1152, 1440, 1928
BsaWI	WCCGGW	3 cut(s)	196, 441, 1954
Bse118I	RCCGGY	4 cut(s)	85, 252, 483, 1618
Bse1I	ACTGG	5 cut(s)	1447, 1531, 1618, 1847, 2474
Bse3DI	GCAATG	1 cut(s)	827
Bse8I	GATNNNNATC	1 cut(s)	801
BseAI	TCCGGA	1 cut(s)	196
BseBI	CCWGG	4 cut(s)	275, 588, 1442, 1941
BseDI	CCNNGG	9 cut(s)	29, 151, 274, 335, 564, 737, 1152, 1440, 1928
BseGI	GGATG	3 cut(s)	373, 1643, 1843
BseJI	GATNNNNATC	1 cut(s)	801
BseMI	GCAATG	1 cut(s)	827
BseMII	CTCAG	6 cut(s)	80, 680, 783, 947, 1206, 1906
BseNI	ACTGG	5 cut(s)	1447, 1531, 1618, 1847, 2474
BseRI	GAGGAG	3 cut(s)	305, 650, 2354
BseSI	GKGCMC	1 cut(s)	1654
BseX3I	CGGCCG	1 cut(s)	87
BseXI	GCAGC	8 cut(s)	130, 133, 355, 463, 943, 1122, 1789, 1897
BseYI	CCCAGC	1 cut(s)	959
Bsh1236I	CGCG	2 cut(s)	165, 1020
Bsh1285I	CGRYCG	2 cut(s)	90, 1623
BshFI	GGCC	7 cut(s)	89, 432, 595, 736, 1147, 1618, 1633
BshNI	GGYRCC	3 cut(s)	460, 1651, 1746
BsiEI	CGRYCG	2 cut(s)	90, 1623
BsiHKAI	GWGCWC	2 cut(s)	283, 2017
BsiHKCI	CYCGRG	1 cut(s)	317
BslFI	GGGAC	2 cut(s)	46, 1679
BsmAI	GTCTC	2 cut(s)	1188, 2354
BsmFI	GGGAC	2 cut(s)	46, 1679
BsmI	GAATGC	1 cut(s)	710
BsnI	GGCC	7 cut(s)	89, 432, 595, 736, 1147, 1618, 1633
Bso31I	GGTCTC	2 cut(s)	1188, 2354
BsoBI	CYCGRG	1 cut(s)	317
Bsp1286I	GDGCHC	4 cut(s)	283, 609, 1654, 2017
Bsp13I	TCCGGA	1 cut(s)	196
Bsp1407I	TGTACA	2 cut(s)	306, 2457
Bsp1720I	GCTNAGC	1 cut(s)	66
BspANI	GGCC	7 cut(s)	89, 432, 595, 736, 1147, 1618, 1633
BspCNI	CTCAG	6 cut(s)	79, 681, 784, 946, 1207, 1905
BspEI	TCCGGA	1 cut(s)	196
BspFNI	CGCG	2 cut(s)	165, 1020
BspLI	GGNNCC	7 cut(s)	462, 798, 915, 1653, 1695, 1748, 1938
BspMAI	CTGCAG	1 cut(s)	1497
BspPI	GGATC	4 cut(s)	791, 804, 818, 2460
BspT107I	GGYRCC	3 cut(s)	460, 1651, 1746
BspTNI	GGTCTC	2 cut(s)	1188, 2354
BsrDI	GCAATG	1 cut(s)	827
BsrFI	RCCGGY	4 cut(s)	85, 252, 483, 1618
BsrGI	TGTACA	2 cut(s)	306, 2457
BsrI	ACTGG	5 cut(s)	1447, 1531, 1618, 1847, 2474
BssAI	RCCGGY	4 cut(s)	85, 252, 483, 1618
BssECI	CCNNGG	9 cut(s)	29, 151, 274, 335, 564, 737, 1152, 1440, 1928
BssNAI	GTATAC	1 cut(s)	584
BssNI	GRCGYC	1 cut(s)	1747
BssT1I	CCWWGG	4 cut(s)	564, 737, 1152, 1928
Bst1107I	GTATAC	1 cut(s)	584
Bst2UI	CCWGG	4 cut(s)	275, 588, 1442, 1941
Bst4CI	ACNGT	7 cut(s)	1538, 1604, 1768, 2027, 2053, 2065, 2194
Bst6I	CTCTTC	5 cut(s)	93, 357, 1191, 1704, 2035
BstACI	GRCGYC	1 cut(s)	1747
BstAUI	TGTACA	2 cut(s)	306, 2457
BstC8I	GCNNGC	5 cut(s)	109, 810, 1950, 2421, 2516
BstDEI	CTNAG	7 cut(s)	66, 689, 792, 933, 1215, 1773, 1892
BstDSI	CCRYGG	2 cut(s)	151, 335
BstENI	CCTNNNNNAGG	1 cut(s)	613
BstF5I	GGATG	3 cut(s)	373, 1643, 1843
BstFNI	CGCG	2 cut(s)	165, 1020
BstH2I	RGCGCY	1 cut(s)	1750
BstHHI	GCGC	3 cut(s)	165, 1022, 1749
BstMAI	GTCTC	2 cut(s)	1188, 2354
BstMCI	CGRYCG	2 cut(s)	90, 1623
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 199, 262, 340, 349, 460, 1144, 1276
BstNI	CCWGG	4 cut(s)	275, 588, 1442, 1941
BstNSI	RCATGY	4 cut(s)	193, 206, 238, 1270
BstSCI	CCNGG	7 cut(s)	28, 273, 586, 844, 1440, 1633, 1939
BstSFI	CTRYAG	3 cut(s)	1249, 1493, 2049
BstSLI	GKGCMC	1 cut(s)	1654
BstUI	CGCG	2 cut(s)	165, 1020
BstV1I	GCAGC	8 cut(s)	130, 133, 355, 463, 943, 1122, 1789, 1897
BstV2I	GAAGAC	3 cut(s)	68, 419, 1232
BstX2I	RGATCY	2 cut(s)	796, 2452
BstXI	CCANNNNNNTGG	1 cut(s)	1849
BstYI	RGATCY	2 cut(s)	796, 2452
BstZ17I	GTATAC	1 cut(s)	584
BstZI	CGGCCG	1 cut(s)	87
BsuI	GTATCC	1 cut(s)	693
BsuRI	GGCC	7 cut(s)	89, 432, 595, 736, 1147, 1618, 1633
BtgI	CCRYGG	2 cut(s)	151, 335
BtrI	CACGTC	2 cut(s)	2434, 2529
BtsCI	GGATG	3 cut(s)	373, 1643, 1843
BtsI	GCAGTG	1 cut(s)	951
BtsIMutI	CAGTG	4 cut(s)	951, 1854, 1900, 2058
Cac8I	GCNNGC	5 cut(s)	109, 810, 1950, 2421, 2516
CfoI	GCGC	3 cut(s)	165, 1022, 1749
Cfr10I	RCCGGY	4 cut(s)	85, 252, 483, 1618
Cfr13I	GGNCC	8 cut(s)	141, 431, 593, 1444, 1616, 1631, 1693, 2147
CseI	GACGC	1 cut(s)	154
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	7 cut(s)	7, 250, 307, 700, 1498, 1534, 2458
CviQI	GTAC	7 cut(s)	7, 250, 307, 700, 1498, 1534, 2458
DdeI	CTNAG	7 cut(s)	66, 689, 792, 933, 1215, 1773, 1892
DinI	GGCGCC	1 cut(s)	1748
DraIII	CACNNNGTG	3 cut(s)	304, 2012, 2420
DrdI	GACNNNNNNGTC	1 cut(s)	266
DriI	GACNNNNNGTC	2 cut(s)	238, 2067
DseDI	GACNNNNNNGTC	1 cut(s)	266
EaeI	YGGCCR	1 cut(s)	87
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	5 cut(s)	93, 357, 1191, 1704, 2035
Eam1105I	GACNNNNNGTC	2 cut(s)	238, 2067
EarI	CTCTTC	5 cut(s)	93, 357, 1191, 1704, 2035
Ecl136II	GAGCTC	1 cut(s)	281
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	4 cut(s)	564, 737, 1152, 1928
Eco147I	AGGCCT	1 cut(s)	1147
Eco24I	GRGCYC	2 cut(s)	283, 609
Eco31I	GGTCTC	2 cut(s)	1188, 2354
Eco32I	GATATC	1 cut(s)	1819
Eco47I	GGWCC	4 cut(s)	141, 1444, 1693, 2147
Eco52I	CGGCCG	1 cut(s)	87
Eco53kI	GAGCTC	1 cut(s)	281
Eco57I	CTGAAG	2 cut(s)	924, 1172
Eco88I	CYCGRG	1 cut(s)	317
EcoICRI	GAGCTC	1 cut(s)	281
EcoNI	CCTNNNNNAGG	1 cut(s)	613
EcoRII	CCWGG	4 cut(s)	273, 586, 1440, 1939
EcoRV	GATATC	1 cut(s)	1819
EcoT14I	CCWWGG	4 cut(s)	564, 737, 1152, 1928
EcoT22I	ATGCAT	1 cut(s)	783
EcoT38I	GRGCYC	2 cut(s)	283, 609
EgeI	GGCGCC	1 cut(s)	1748
EheI	GGCGCC	1 cut(s)	1748
ErhI	CCWWGG	4 cut(s)	564, 737, 1152, 1928
FalI	AAGNNNNNCTT	4 cut(s)	1157, 1189, 1224, 1256
FaqI	GGGAC	2 cut(s)	46, 1679
FauI	CCCGC	4 cut(s)	116, 140, 258, 1228
FbaI	TGATCA	1 cut(s)	423
FblI	GTMKAC	2 cut(s)	270, 583
FokI	GGATG	3 cut(s)	380, 1650, 1850
FriOI	GRGCYC	2 cut(s)	283, 609
FspBI	CTAG	1 cut(s)	1731
GlaI	GCGC	3 cut(s)	164, 1021, 1748
GsaI	CCCAGC	1 cut(s)	963
GsuI	CTGGAG	2 cut(s)	368, 2303
HaeII	RGCGCY	1 cut(s)	1750
HaeIII	GGCC	7 cut(s)	89, 432, 595, 736, 1147, 1618, 1633
HgaI	GACGC	1 cut(s)	154
HhaI	GCGC	3 cut(s)	165, 1022, 1749
Hin1I	GRCGYC	1 cut(s)	1747
Hin6I	GCGC	3 cut(s)	163, 1020, 1747
HinP1I	GCGC	3 cut(s)	163, 1020, 1747
HincII	GTYRAC	2 cut(s)	1419, 1524
HindII	GTYRAC	2 cut(s)	1419, 1524
HindIII	AAGCTT	1 cut(s)	1424
HpaI	GTTAAC	2 cut(s)	1419, 1524
HphI	GGTGA	5 cut(s)	15, 75, 899, 1301, 2151
Hpy166II	GTNNAC	7 cut(s)	271, 307, 584, 1419, 1524, 2004, 2030
Hpy188I	TCNGA	7 cut(s)	508, 522, 558, 697, 1011, 1045, 1104
Hpy8I	GTNNAC	7 cut(s)	271, 307, 584, 1419, 1524, 2004, 2030
Hpy99I	CGWCG	4 cut(s)	170, 173, 244, 1020
HpyCH4III	ACNGT	7 cut(s)	1538, 1604, 1768, 2027, 2053, 2065, 2194
HpyCH4IV	ACGT	4 cut(s)	2032, 2401, 2433, 2528
HpyCH4V	TGCA	7 cut(s)	710, 781, 812, 1138, 1495, 1885, 2197
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 199, 262, 340, 349, 460, 1144, 1276
HpyF3I	CTNAG	7 cut(s)	66, 689, 792, 933, 1215, 1773, 1892
HpySE526I	ACGT	4 cut(s)	2032, 2401, 2433, 2528
Hsp92I	GRCGYC	1 cut(s)	1747
HspAI	GCGC	3 cut(s)	163, 1020, 1747
KasI	GGCGCC	1 cut(s)	1746
Kpn2I	TCCGGA	1 cut(s)	196
Ksp22I	TGATCA	1 cut(s)	423
KspAI	GTTAAC	2 cut(s)	1419, 1524
Lsp1109I	GCAGC	8 cut(s)	130, 133, 355, 463, 943, 1122, 1789, 1897
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	1 cut(s)	1731
MaeII	ACGT	4 cut(s)	2032, 2401, 2433, 2528
MaeIII	GTNAC	4 cut(s)	81, 1538, 1768, 2402
MfeI	CAATTG	1 cut(s)	1478
MflI	RGATCY	2 cut(s)	796, 2452
MhlI	GDGCHC	4 cut(s)	283, 609, 1654, 2017
Mly113I	GGCGCC	1 cut(s)	1747
MlyI	GAGTC	5 cut(s)	557, 934, 1006, 1101, 2216
MmeI	TCCRAC	3 cut(s)	1892, 2184, 2245
Mph1103I	ATGCAT	1 cut(s)	783
MroI	TCCGGA	1 cut(s)	196
MseI	TTAA	8 cut(s)	654, 786, 1053, 1083, 1326, 1418, 1523, 2090
MslI	CAYNNNNRTG	4 cut(s)	770, 1657, 1847, 1893
MspA1I	CMGCKG	3 cut(s)	346, 374, 688
MspR9I	CCNGG	7 cut(s)	30, 275, 588, 846, 1442, 1635, 1941
MunI	CAATTG	1 cut(s)	1478
Mva1269I	GAATGC	1 cut(s)	710
MvaI	CCWGG	4 cut(s)	275, 588, 1442, 1941
MvnI	CGCG	2 cut(s)	165, 1020
MwoI	GCNNNNNNNGC	8 cut(s)	162, 199, 262, 340, 349, 460, 1144, 1276
NarI	GGCGCC	1 cut(s)	1747
NciI	CCSGG	3 cut(s)	30, 846, 1635
NlaIV	GGNNCC	7 cut(s)	462, 798, 915, 1653, 1695, 1748, 1938
NmuCI	GTSAC	2 cut(s)	81, 2402
NsiI	ATGCAT	1 cut(s)	783
NspI	RCATGY	4 cut(s)	193, 206, 238, 1270
OliI	CACNNNNGTG	1 cut(s)	1657
PaeR7I	CTCGAG	1 cut(s)	317
PceI	AGGCCT	1 cut(s)	1147
PciI	ACATGT	1 cut(s)	234
PctI	GAATGC	1 cut(s)	710
PfeI	GAWTC	5 cut(s)	49, 173, 1644, 2077, 2297
PflMI	CCANNNNNTGG	1 cut(s)	1756
PleI	GAGTC	5 cut(s)	556, 933, 1006, 1100, 2215
PluTI	GGCGCC	1 cut(s)	1750
PpsI	GAGTC	5 cut(s)	556, 933, 1006, 1100, 2215
PscI	ACATGT	1 cut(s)	234
PsiI	TTATAA	2 cut(s)	1320, 2022
Psp124BI	GAGCTC	1 cut(s)	283
Psp6I	CCWGG	4 cut(s)	273, 586, 1440, 1939
PspFI	CCCAGC	1 cut(s)	959
PspGI	CCWGG	4 cut(s)	273, 586, 1440, 1939
PspN4I	GGNNCC	7 cut(s)	462, 798, 915, 1653, 1695, 1748, 1938
PspPI	GGNCC	8 cut(s)	141, 431, 593, 1444, 1616, 1631, 1693, 2147
PstI	CTGCAG	1 cut(s)	1497
PsuI	RGATCY	2 cut(s)	796, 2452
PvuII	CAGCTG	1 cut(s)	346
RsaI	GTAC	7 cut(s)	8, 251, 308, 701, 1499, 1535, 2459
RsaNI	GTAC	7 cut(s)	7, 250, 307, 700, 1498, 1534, 2458
RseI	CAYNNNNRTG	4 cut(s)	770, 1657, 1847, 1893
SacI	GAGCTC	1 cut(s)	283
SaqAI	TTAA	8 cut(s)	654, 786, 1053, 1083, 1326, 1418, 1523, 2090
Sau96I	GGNCC	8 cut(s)	141, 431, 593, 1444, 1616, 1631, 1693, 2147
SchI	GAGTC	5 cut(s)	557, 934, 1006, 1101, 2216
ScrFI	CCNGG	7 cut(s)	30, 275, 588, 846, 1442, 1635, 1941
SduI	GDGCHC	4 cut(s)	283, 609, 1654, 2017
SexAI	ACCWGGT	1 cut(s)	586
SfcI	CTRYAG	3 cut(s)	1249, 1493, 2049
SfoI	GGCGCC	1 cut(s)	1748
Sfr274I	CTCGAG	1 cut(s)	317
SinI	GGWCC	4 cut(s)	141, 1444, 1693, 2147
SlaI	CTCGAG	1 cut(s)	317
SmiMI	CAYNNNNRTG	4 cut(s)	770, 1657, 1847, 1893
SmlI	CTYRAG	5 cut(s)	284, 317, 997, 1331, 2495
SmoI	CTYRAG	5 cut(s)	284, 317, 997, 1331, 2495
SseBI	AGGCCT	1 cut(s)	1147
SspDI	GGCGCC	1 cut(s)	1746
SspI	AATATT	2 cut(s)	1465, 1924
SspMI	CTAG	1 cut(s)	1731
SstI	GAGCTC	1 cut(s)	283
StuI	AGGCCT	1 cut(s)	1147
StyD4I	CCNGG	7 cut(s)	28, 273, 586, 844, 1440, 1633, 1939
StyI	CCWWGG	4 cut(s)	564, 737, 1152, 1928
TaaI	ACNGT	7 cut(s)	1538, 1604, 1768, 2027, 2053, 2065, 2194
TaiI	ACGT	4 cut(s)	2035, 2404, 2436, 2531
TaqI	TCGA	9 cut(s)	171, 242, 318, 603, 1069, 1090, 1797, 1810, 2071
TaqII	GACCGA	1 cut(s)	1170
TatI	WGTACW	4 cut(s)	306, 699, 1497, 2457
TauI	GCSGC	3 cut(s)	374, 1561, 2312
TfiI	GAWTC	5 cut(s)	49, 173, 1644, 2077, 2297
Tru1I	TTAA	8 cut(s)	654, 786, 1053, 1083, 1326, 1418, 1523, 2090
Tru9I	TTAA	8 cut(s)	654, 786, 1053, 1083, 1326, 1418, 1523, 2090
TscAI	CASTG	4 cut(s)	958, 1854, 1900, 2058
TseFI	GTSAC	2 cut(s)	81, 2402
TseI	GCWGC	8 cut(s)	118, 121, 343, 451, 956, 1135, 1777, 1885
Tsp45I	GTSAC	2 cut(s)	81, 2402
TspDTI	ATGAA	5 cut(s)	425, 1382, 1586, 1871, 2437
TspGWI	ACGGA	2 cut(s)	69, 1442
TspRI	CASTG	4 cut(s)	958, 1854, 1900, 2058
Van91I	CCANNNNNTGG	1 cut(s)	1756
VpaK11BI	GGWCC	4 cut(s)	141, 1444, 1693, 2147
XagI	CCTNNNNNAGG	1 cut(s)	613
XapI	RAATTY	4 cut(s)	18, 599, 1720, 2215
XceI	RCATGY	4 cut(s)	193, 206, 238, 1270
XhoI	CTCGAG	1 cut(s)	317
XmiI	GTMKAC	2 cut(s)	270, 583
XspI	CTAG	1 cut(s)	1731
Zsp2I	ATGCAT	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.