Rorug02G0598000

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
71840176 .. 71840430
255 bp
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UTR
Exon/CDS
Intron
Rorug02G0598000.1

Sequence Viewer

Length: 255 bp
ATGGCCACTGATGATTCGAGGATGGGGAAAGAAATTGTGCCAACATCTGAAGAGAAAGAAGAACAACAGCCTCCAACCGAAGTGAACAAGAGAAAGAGGGCAGAGAAGAAAGTCAAGAAGCCAGTGCGGCCATTGAAACCAACCTCACGGAGTTGGGTCTGGAAGCACTTCGAGAAGTATGAGAATCCCCTGTACGAGACAGTAGATGGAAAGCAGAAGCAGGTTGGCCATGAATTACGTGAACTGCTGTGTTAA

Protein Analysis

84

Amino Acids

9.96

Weight (kDa)

9.27

Isoelectric Point (pI)

57.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 211
AciI CCGC 1 cut(s) 127
AcoI YGGCCR 3 cut(s) 3, 128, 226
AcuI CTGAAG 1 cut(s) 69
AfaI GTAC 1 cut(s) 194
AgsI TTSAA 1 cut(s) 136
Alw26I GTCTC 1 cut(s) 191
AoxI GGCC 3 cut(s) 3, 128, 226
Asp700I GAANNNNTTC 1 cut(s) 167
BalI TGGCCA 2 cut(s) 5, 228
BccI CCATC 2 cut(s) 16, 200
BcoDI GTCTC 1 cut(s) 191
BfuAI ACCTGC 1 cut(s) 211
BglI GCCNNNNNGGC 1 cut(s) 127
BisI GCNGC 1 cut(s) 128
BlsI GCNGC 1 cut(s) 129
BsaAI YACGTR 1 cut(s) 239
Bse1I ACTGG 1 cut(s) 122
BseGI GGATG 1 cut(s) 27
BseNI ACTGG 1 cut(s) 122
BshFI GGCC 3 cut(s) 5, 130, 228
BsmAI GTCTC 1 cut(s) 191
BsnI GGCC 3 cut(s) 5, 130, 228
BspACI CCGC 1 cut(s) 127
BspANI GGCC 3 cut(s) 5, 130, 228
BspMI ACCTGC 1 cut(s) 211
BsrI ACTGG 1 cut(s) 122
Bst4CI ACNGT 1 cut(s) 202
Bst6I CTCTTC 1 cut(s) 45
BstBAI YACGTR 1 cut(s) 239
BstF5I GGATG 1 cut(s) 27
BstMAI GTCTC 1 cut(s) 191
BstMWI GCNNNNNNNGC 1 cut(s) 127
BsuRI GGCC 3 cut(s) 5, 130, 228
BtsCI GGATG 1 cut(s) 27
BtsIMutI CAGTG 2 cut(s) 6, 129
BveI ACCTGC 1 cut(s) 211
Csp6I GTAC 1 cut(s) 193
CviAII CATG 1 cut(s) 230
CviJI RGCY 5 cut(s) 5, 70, 121, 130, 228
CviKI_1 RGCY 5 cut(s) 5, 70, 121, 130, 228
CviQI GTAC 1 cut(s) 193
EaeI YGGCCR 3 cut(s) 3, 128, 226
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
Eco57I CTGAAG 1 cut(s) 69
FaeI CATG 1 cut(s) 233
FaiI YATR 2 cut(s) 180, 231
FatI CATG 1 cut(s) 229
Fnu4HI GCNGC 1 cut(s) 128
FokI GGATG 1 cut(s) 34
Fsp4HI GCNGC 1 cut(s) 128
GluI GCNGC 1 cut(s) 128
HaeIII GGCC 3 cut(s) 5, 130, 228
Hin1II CATG 1 cut(s) 233
HinfI GANTC 2 cut(s) 14, 184
Hpy166II GTNNAC 2 cut(s) 85, 242
Hpy188I TCNGA 1 cut(s) 49
Hpy188III TCNNGA 3 cut(s) 115, 160, 172
Hpy8I GTNNAC 2 cut(s) 85, 242
HpyCH4III ACNGT 1 cut(s) 202
HpyCH4IV ACGT 1 cut(s) 238
HpyF10VI GCNNNNNNNGC 1 cut(s) 127
HpySE526I ACGT 1 cut(s) 238
Hsp92II CATG 1 cut(s) 233
LpnPI CCDG 4 cut(s) 135, 145, 203, 206
MaeII ACGT 1 cut(s) 238
MboII GAAGA 3 cut(s) 62, 71, 118
MlsI TGGCCA 2 cut(s) 5, 228
MluCI AATT 2 cut(s) 33, 233
MluNI TGGCCA 2 cut(s) 5, 228
MmeI TCCRAC 1 cut(s) 98
MnlI CCTC 4 cut(s) 12, 81, 90, 154
Mox20I TGGCCA 2 cut(s) 5, 228
MroXI GAANNNNTTC 1 cut(s) 167
MscI TGGCCA 2 cut(s) 5, 228
MseI TTAA 1 cut(s) 253
Msp20I TGGCCA 2 cut(s) 5, 228
MwoI GCNNNNNNNGC 1 cut(s) 127
NlaIII CATG 1 cut(s) 233
PdmI GAANNNNTTC 1 cut(s) 167
PfeI GAWTC 2 cut(s) 14, 184
PkrI GCNGC 1 cut(s) 129
Ppu21I YACGTR 1 cut(s) 239
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
SaqAI TTAA 1 cut(s) 253
SatI GCNGC 1 cut(s) 128
SetI ASST 3 cut(s) 146, 225, 241
Sse9I AATT 2 cut(s) 33, 233
SsiI CCGC 1 cut(s) 127
TaaI ACNGT 1 cut(s) 202
TaiI ACGT 1 cut(s) 241
TaqI TCGA 2 cut(s) 17, 171
TasI AATT 2 cut(s) 33, 233
TauI GCSGC 1 cut(s) 130
TfiI GAWTC 2 cut(s) 14, 184
Tru1I TTAA 1 cut(s) 253
Tru9I TTAA 1 cut(s) 253
TscAI CASTG 2 cut(s) 13, 129
TspDTI ATGAA 1 cut(s) 246
TspGWI ACGGA 1 cut(s) 163
TspRI CASTG 2 cut(s) 13, 129
XmnI GAANNNNTTC 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.