Rorug03G0045900

RWP-RK domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0017685
Physical Location & Seq
Forward (+)
3536774 .. 3539955
3182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0045900.1

Sequence Viewer

Length: 2238 bp
ATGGAAGAGACAGCTCCGGTGACGGCGAAAGACTCGGACTTGAAGCGGCAGAGAAGCTTCGGCAAAGCGTACAAGACCTTCCAAACGCAGGCGACTTCGCTCGTCGGGTTGGCCCGGCAGTTCAAGGAGCTCCAGGCGCGGTGGGGGTCCACGGAGGACGAGCTCCGGACGCGGTTCCGGGAAGTCCGGGACCGGGAAAGGGAGGTCGTCGTGAGAGAGAAGCAGTTGGAGGAGAAAGAGGCGAAGTGGAAGCAGGTCGAGATGGAAGCGCAGAAGAAAGAGGTGGAATCGAGTAAGTACCACTTGCTTTTCCTGAGGCCATTGATCAGTAAACATGTTCAAGAGCTTGATGATTTGAAAGTGATGGTGAGTGAGAAGAAGAAAGAGCGTGATTTGATCGAAAAAAGGGGTTTAGAGTGGACTGAGAGATTGAATTCTGTTGAGAAATGTGTGGAGGAGAAGACGAAAGAGCTCGAGTCGAAGGAGGAGGAAGTGAGAGGGGTGGAAGGGAGGTTGAGGATTTCTAGGGAGGAGATTGAGTTGAAGGAGAGGGAGTTGAGTGGGATTTTGGAGACAATTGAGGAGTGCAAGAGAGAATGTGGTTTGAAAGAAGAGGAAATTGAAGCGAAACGAAGGTACATCGATGAATGGGAGAAGGAGATGGATTTGAAGAGAGAGGAACTTGTTGATCAGCTTGATGCTATGAAAATACTAGTTAGAGAGAAGGGGAAGGAGTGCGAGTTGATCGAAAATCAGGTTTTGGAGTCATCAACGAGATCGTATTATTTTGGGAAATGTGTAGAAGAGAAGAGGAAAGAGTTTGAGGCTAAGGAAAAGGAACTGAAAGAGGTTCAGGGGTGTATTGAGTTGAAGGAGAGGGAATTAGATGGGATTTTGAAGTCGATTCAGGAGCACACGAAAGAATGTGATTTGAAAGGAAAGCAAGTTAAGGCATTGGAGTGGTCCATTGAGAAATGTGAAAAAGAGATGGAATTGAAAAGGGAGGAGTGGTCTCGTAAGCTTGAGTTGAAGGAGATGGAACTAGAAAGGTTGTTTGAGAAGTTTGAGTTGAGAGGGCAACAACTTGAGCCGATAGTTGAAGAGCTTCGTGGTATTGATAAGAGGGTGGATGGATGCTTAAACGAGGGTCTGTGTAAAGAGAGGTACTTGCAGACATGTGAAAAATTGATACAAGAACGCGAAAGGTGTTTGGATTCAGTGTCCCATGAACTTAAGATGAAAGAGAGGCACATTGAAGAGGAGGCCAAAGAGCTTGAATTGAAAAAAATACAATTTTATTCTCAAGTGAAGACTCAGCAGTTGGAAAGAGAAAAGCATTTTGCTTCACTTAAAAAATGGTTAGAACAACAAGATCAGTCTTTATATGCACTCCAAAAGTCGATAGAAGAGGTCAAAAAGCTTTCAGAGAGGCGACTTGAACAGCAGGGTGGAGTGATTGAGTTGAAACAAAAACTATTTGATTCTCAGCTATTGGAAAGAGAAGAGCAACTTGGTTCAATTGGAAAGTCAATAGAAGAATGTGATAAGCAGTTCAACGGAGTTCAAAAGTTGGTTCGAGAGCAGAAAAAGCATTTGGATTCACTGTCCCATACACTCCATATAAGAGAGACGCAAGCTGAAAAGCAGGTCAAAGAGCTTGAGTTGAACTTAAAACATTCTGATTTTGAAGTGAGTACTAAGCAGTTGGAACTTACCCCTGCCGCTGATGATATGATTATTCCTCACTCTGTAAGTGATCAACCCAACATCAATAGGGATGATAGAAGCTTCGAGGTGATCCCTGGTATTATTCGGAATCTTATCGAAAGAAAGCAGCTGCTTAAGGCTGTTACATATATCTGCACCTTCAAGCAAATTGACAAGTTTCCCCCAGTACCACTCTTGAAAGAATTTGTGGAGGATGCAAAGAAGTCTTGCACTGAATTAATCTTCAGTAAAGAGATATCACATGATGTAAAGGAGAAGGTTGTAGATGACCTAATAGCTGATCTAAGAGCTGTGATTCAGTGCATTGAAGATCACAGCCTCGAGTCGCAGTACCCACCAACTGACTTTATGATGCTAATTCAAGGGCTTGGGGAACTAAAGGAGAATCCGAAGCTGGTGCTATCTCTTCCGTCCAATGTTGAAAAACAAGAGCAAAGAAAAGGAAGGAAACGAAGTTCCAGCAGTGCTCCCTCCACATCTCACACATATCAGCTGCGTAAAAGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RWP-RK

Protein Analysis

745

Amino Acids

88.11

Weight (kDa)

5.73

Isoelectric Point (pI)

56.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 599 - 707 4.8e-22 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017685)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g10050
rosa_chinensis RchiOBHm_Chr3g0460751
rosa_laevigata RLG00000024984
rosa_roxburghii Rroxscaffold_6G00419250
rosa_rugosa Rorug03G0045800 Rorug03G0045900 Rorug03G0045900
rosa_samantha Rh3AG103200 Rh3BG106800 Rh3CG108700 Rh3DG108400
rosa_wichuraiana Rw3G008780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 244, 1636
AccII CGCG 3 cut(s) 139, 172, 1200
AccIII TCCGGA 1 cut(s) 165
AciI CCGC 4 cut(s) 46, 139, 172, 1722
AclWI GGATC 1 cut(s) 1792
AcsI RAATTY 2 cut(s) 433, 1910
AcuI CTGAAG 1 cut(s) 1936
AfaI GTAC 7 cut(s) 71, 299, 638, 1166, 1696, 1896, 2060
AfiI CCNNNNNNNGG 3 cut(s) 88, 193, 199
AflII CTTAAG 2 cut(s) 1232, 1841
AflIII ACRYGT 2 cut(s) 334, 1175
AhlI ACTAGT 1 cut(s) 712
AjnI CCWGG 2 cut(s) 132, 1801
AjuI GAANNNNNNNTTGG 4 cut(s) 1494, 1526, 1577, 1609
AloI GAACNNNNNNTCC 2 cut(s) 2167, 2199
Alw21I GWGCWC 5 cut(s) 132, 165, 474, 915, 2197
Alw26I GTCTC 4 cut(s) 2, 566, 1017, 1622
AlwI GGATC 1 cut(s) 1792
Ama87I CYCGRG 2 cut(s) 473, 2048
Aor13HI TCCGGA 1 cut(s) 165
AoxI GGCC 3 cut(s) 111, 317, 1263
ApeKI GCWGC 3 cut(s) 1834, 1837, 2221
ApoI RAATTY 2 cut(s) 433, 1910
AseI ATTAAT 1 cut(s) 1946
Asp700I GAANNNNTTC 1 cut(s) 1104
AspLEI GCGC 2 cut(s) 139, 271
AspS9I GGNCC 4 cut(s) 112, 147, 190, 963
AsuC2I CCSGG 4 cut(s) 115, 179, 188, 194
AsuHPI GGTGA 3 cut(s) 31, 379, 1807
AvaI CYCGRG 2 cut(s) 473, 2048
AvaII GGWCC 3 cut(s) 147, 190, 963
AxyI CCTNAGG 1 cut(s) 314
BanII GRGCYC 3 cut(s) 132, 165, 474
BarI GAAGNNNNNNTAC 2 cut(s) 62, 94
BbsI GAAGAC 2 cut(s) 467, 1316
Bbv12I GWGCWC 5 cut(s) 132, 165, 474, 915, 2197
BbvI GCAGC 3 cut(s) 1824, 1846, 2208
BccI CCATC 7 cut(s) 256, 358, 655, 881, 982, 1030, 1124
BceAI ACGGC 1 cut(s) 39
BcgI CGANNNNNNTGC 2 cut(s) 2107, 2141
BciT130I CCWGG 2 cut(s) 134, 1803
BclI TGATCA 3 cut(s) 324, 688, 1756
BcnI CCSGG 4 cut(s) 115, 179, 188, 194
BcoDI GTCTC 4 cut(s) 2, 566, 1017, 1622
BcuI ACTAGT 1 cut(s) 712
BfaI CTAG 3 cut(s) 525, 713, 1043
BfrI CTTAAG 2 cut(s) 1232, 1841
BfuAI ACCTGC 2 cut(s) 244, 1636
BisI GCNGC 5 cut(s) 47, 1722, 1835, 1838, 2222
BlsI GCNGC 5 cut(s) 48, 1723, 1836, 1839, 2223
BmcAI AGTACT 1 cut(s) 1696
Bme1390I CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1803
Bme18I GGWCC 3 cut(s) 147, 190, 963
BmeT110I CYCGRG 2 cut(s) 473, 2048
BmgT120I GGNCC 4 cut(s) 112, 147, 190, 963
BmiI GGNNCC 3 cut(s) 148, 176, 191
BmrFI CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1803
BmrI ACTGGG 1 cut(s) 1886
BmsI GCATC 4 cut(s) 688, 1124, 1912, 2070
BmuI ACTGGG 1 cut(s) 1886
BpiI GAAGAC 2 cut(s) 467, 1316
BpmI CTGGAG 1 cut(s) 116
Bpu10I CCTNAGC 1 cut(s) 828
BpuEI CTTGAG 4 cut(s) 1043, 1106, 1287, 1679
BpuMI CCSGG 4 cut(s) 115, 179, 188, 194
Bsa29I ATCGAT 1 cut(s) 642
BsaI GGTCTC 1 cut(s) 1017
BsaJI CCNNGG 2 cut(s) 150, 1801
BsaWI WCCGGW 2 cut(s) 16, 165
BsaXI ACNNNNNCTCC 8 cut(s) 524, 539, 554, 569, 725, 755, 995, 1025
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 193, 199
Bse1I ACTGG 1 cut(s) 1892
Bse21I CCTNAGG 1 cut(s) 314
BseAI TCCGGA 1 cut(s) 165
BseBI CCWGG 2 cut(s) 134, 1803
BseCI ATCGAT 1 cut(s) 642
BseDI CCNNGG 2 cut(s) 150, 1801
BseGI GGATG 4 cut(s) 1135, 1139, 1783, 1927
BseLI CCNNNNNNNGG 3 cut(s) 88, 193, 199
BseMII CTCAG 4 cut(s) 305, 414, 1328, 1499
BseNI ACTGG 1 cut(s) 1892
BseRI GAGGAG 7 cut(s) 245, 470, 500, 545, 596, 1019, 1274
BseXI GCAGC 3 cut(s) 1824, 1846, 2208
BsgI GTGCAG 1 cut(s) 1846
Bsh1236I CGCG 3 cut(s) 139, 172, 1200
BshFI GGCC 3 cut(s) 113, 319, 1265
BshVI ATCGAT 1 cut(s) 642
BsiHKAI GWGCWC 5 cut(s) 132, 165, 474, 915, 2197
BsiHKCI CYCGRG 2 cut(s) 473, 2048
BsiSI CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
BslFI GGGAC 3 cut(s) 203, 1207, 1591
BslI CCNNNNNNNGG 3 cut(s) 88, 193, 199
BsmAI GTCTC 4 cut(s) 2, 566, 1017, 1622
BsmBI CGTCTC 1 cut(s) 1622
BsmFI GGGAC 3 cut(s) 203, 1207, 1591
BsnI GGCC 3 cut(s) 113, 319, 1265
Bso31I GGTCTC 1 cut(s) 1017
BsoBI CYCGRG 2 cut(s) 473, 2048
Bsp1286I GDGCHC 5 cut(s) 132, 165, 474, 915, 2197
Bsp13I TCCGGA 1 cut(s) 165
BspACI CCGC 4 cut(s) 46, 139, 172, 1722
BspANI GGCC 3 cut(s) 113, 319, 1265
BspCNI CTCAG 4 cut(s) 306, 415, 1327, 1498
BspDI ATCGAT 1 cut(s) 642
BspEI TCCGGA 1 cut(s) 165
BspFNI CGCG 3 cut(s) 139, 172, 1200
BspLI GGNNCC 3 cut(s) 148, 176, 191
BspMI ACCTGC 2 cut(s) 244, 1636
BspPI GGATC 1 cut(s) 1792
BspQI GCTCTTC 2 cut(s) 1095, 1497
BspTI CTTAAG 2 cut(s) 1232, 1841
BspTNI GGTCTC 1 cut(s) 1017
BsrI ACTGG 1 cut(s) 1892
BssECI CCNNGG 2 cut(s) 150, 1801
Bst2UI CCWGG 2 cut(s) 134, 1803
Bst4CI ACNGT 1 cut(s) 1605
Bst6I CTCTTC 9 cut(s) 606, 665, 798, 803, 1095, 1251, 1401, 1497, 2139
BstAFI CTTAAG 2 cut(s) 1232, 1841
BstC8I GCNNGC 2 cut(s) 90, 1635
BstDEI CTNAG 7 cut(s) 314, 423, 828, 1314, 1485, 1698, 2012
BstDSI CCRYGG 1 cut(s) 150
BstF5I GGATG 4 cut(s) 1135, 1139, 1783, 1927
BstFNI CGCG 3 cut(s) 139, 172, 1200
BstHHI GCGC 2 cut(s) 139, 271
BstMAI GTCTC 4 cut(s) 2, 566, 1017, 1622
BstMWI GCNNNNNNNGC 3 cut(s) 136, 169, 1588
BstNI CCWGG 2 cut(s) 134, 1803
BstNSI RCATGY 2 cut(s) 338, 1179
BstSCI CCNGG 6 cut(s) 113, 132, 177, 186, 192, 1801
BstUI CGCG 3 cut(s) 139, 172, 1200
BstV1I GCAGC 3 cut(s) 1824, 1846, 2208
BstV2I GAAGAC 2 cut(s) 467, 1316
Bsu15I ATCGAT 1 cut(s) 642
Bsu36I CCTNAGG 1 cut(s) 314
BsuRI GGCC 3 cut(s) 113, 319, 1265
BsuTUI ATCGAT 1 cut(s) 642
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 4 cut(s) 1135, 1139, 1783, 1927
BtsI GCAGTG 1 cut(s) 2197
BtsIMutI CAGTG 5 cut(s) 1224, 1601, 1938, 2033, 2197
BveI ACCTGC 2 cut(s) 244, 1636
Cac8I GCNNGC 2 cut(s) 90, 1635
CfoI GCGC 2 cut(s) 139, 271
Cfr13I GGNCC 4 cut(s) 112, 147, 190, 963
ClaI ATCGAT 1 cut(s) 642
CseI GACGC 2 cut(s) 178, 1639
Csp6I GTAC 7 cut(s) 70, 298, 637, 1165, 1695, 1895, 2059
CviAII CATG 4 cut(s) 335, 1176, 1226, 1970
CviQI GTAC 7 cut(s) 70, 298, 637, 1165, 1695, 1895, 2059
DdeI CTNAG 7 cut(s) 314, 423, 828, 1314, 1485, 1698, 2012
Eam1104I CTCTTC 9 cut(s) 606, 665, 798, 803, 1095, 1251, 1401, 1497, 2139
EarI CTCTTC 9 cut(s) 606, 665, 798, 803, 1095, 1251, 1401, 1497, 2139
Ecl136II GAGCTC 3 cut(s) 130, 163, 472
Eco24I GRGCYC 3 cut(s) 132, 165, 474
Eco31I GGTCTC 1 cut(s) 1017
Eco32I GATATC 1 cut(s) 1965
Eco47I GGWCC 3 cut(s) 147, 190, 963
Eco53kI GAGCTC 3 cut(s) 130, 163, 472
Eco57I CTGAAG 1 cut(s) 1936
Eco81I CCTNAGG 1 cut(s) 314
Eco88I CYCGRG 2 cut(s) 473, 2048
EcoICRI GAGCTC 3 cut(s) 130, 163, 472
EcoRI GAATTC 1 cut(s) 433
EcoRII CCWGG 2 cut(s) 132, 1801
EcoRV GATATC 1 cut(s) 1965
EcoT38I GRGCYC 3 cut(s) 132, 165, 474
Esp3I CGTCTC 1 cut(s) 1622
FaeI CATG 4 cut(s) 338, 1179, 1229, 1973
FalI AAGNNNNNCTT 4 cut(s) 287, 319, 1494, 1526
FaqI GGGAC 3 cut(s) 203, 1207, 1591
FatI CATG 4 cut(s) 334, 1175, 1225, 1969
FbaI TGATCA 3 cut(s) 324, 688, 1756
Fnu4HI GCNGC 5 cut(s) 47, 1722, 1835, 1838, 2222
FokI GGATG 4 cut(s) 1142, 1146, 1790, 1934
FriOI GRGCYC 3 cut(s) 132, 165, 474
Fsp4HI GCNGC 5 cut(s) 47, 1722, 1835, 1838, 2222
FspBI CTAG 3 cut(s) 525, 713, 1043
GlaI GCGC 2 cut(s) 138, 270
GluI GCNGC 5 cut(s) 47, 1722, 1835, 1838, 2222
GsuI CTGGAG 1 cut(s) 116
HaeIII GGCC 3 cut(s) 113, 319, 1265
HapII CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
HgaI GACGC 2 cut(s) 178, 1639
HhaI GCGC 2 cut(s) 139, 271
Hin1II CATG 4 cut(s) 338, 1179, 1229, 1973
Hin6I GCGC 2 cut(s) 137, 269
HinP1I GCGC 2 cut(s) 137, 269
HindIII AAGCTT 4 cut(s) 55, 1019, 1418, 1786
HpaII CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
HphI GGTGA 3 cut(s) 31, 379, 1807
Hpy166II GTNNAC 3 cut(s) 150, 332, 420
Hpy188I TCNGA 5 cut(s) 37, 1426, 1681, 1815, 2118
Hpy188III TCNNGA 8 cut(s) 166, 211, 259, 313, 341, 908, 1577, 1903
Hpy8I GTNNAC 3 cut(s) 150, 332, 420
Hpy99I CGWCG 2 cut(s) 107, 212
HpyCH4III ACNGT 1 cut(s) 1605
HpyCH4V TGCA 7 cut(s) 588, 1171, 1388, 1863, 1925, 1938, 2031
HpyF10VI GCNNNNNNNGC 3 cut(s) 136, 169, 1588
HpyF3I CTNAG 7 cut(s) 314, 423, 828, 1314, 1485, 1698, 2012
Hsp92II CATG 4 cut(s) 338, 1179, 1229, 1973
HspAI GCGC 2 cut(s) 137, 269
Kpn2I TCCGGA 1 cut(s) 165
Ksp22I TGATCA 3 cut(s) 324, 688, 1756
LguI GCTCTTC 2 cut(s) 1095, 1497
LmnI GCTCC 6 cut(s) 19, 127, 135, 168, 910, 2200
Lsp1109I GCAGC 3 cut(s) 1824, 1846, 2208
LweI GCATC 4 cut(s) 688, 1124, 1912, 2070
MaeI CTAG 3 cut(s) 525, 713, 1043
MaeIII GTNAC 2 cut(s) 19, 1849
MfeI CAATTG 2 cut(s) 576, 1518
MhlI GDGCHC 5 cut(s) 132, 165, 474, 915, 2197
MlyI GAGTC 5 cut(s) 26, 485, 773, 1306, 2060
MmeI TCCRAC 3 cut(s) 207, 1302, 1686
MroI TCCGGA 1 cut(s) 165
MroXI GAANNNNTTC 1 cut(s) 1104
MseI TTAA 7 cut(s) 948, 1139, 1233, 1350, 1670, 1842, 1946
MslI CAYNNNNRTG 1 cut(s) 958
MspA1I CMGCKG 3 cut(s) 1724, 1837, 2221
MspCI CTTAAG 2 cut(s) 1232, 1841
MspI CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
MspR9I CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1803
MunI CAATTG 2 cut(s) 576, 1518
MvaI CCWGG 2 cut(s) 134, 1803
MvnI CGCG 3 cut(s) 139, 172, 1200
MwoI GCNNNNNNNGC 3 cut(s) 136, 169, 1588
NciI CCSGG 4 cut(s) 115, 179, 188, 194
NlaIII CATG 4 cut(s) 338, 1179, 1229, 1973
NlaIV GGNNCC 3 cut(s) 148, 176, 191
NmuCI GTSAC 1 cut(s) 19
NspI RCATGY 2 cut(s) 338, 1179
PaeR7I CTCGAG 2 cut(s) 473, 2048
PciI ACATGT 2 cut(s) 334, 1175
PciSI GCTCTTC 2 cut(s) 1095, 1497
PdmI GAANNNNTTC 1 cut(s) 1104
PfeI GAWTC 8 cut(s) 287, 904, 1214, 1481, 1598, 1816, 2023, 2113
PfoI TCCNGGA 2 cut(s) 177, 186
PkrI GCNGC 5 cut(s) 48, 1723, 1836, 1839, 2223
PleI GAGTC 5 cut(s) 26, 484, 772, 1306, 2059
PpsI GAGTC 5 cut(s) 26, 484, 772, 1306, 2059
PscI ACATGT 2 cut(s) 334, 1175
PshBI ATTAAT 1 cut(s) 1946
Psp124BI GAGCTC 3 cut(s) 132, 165, 474
Psp6I CCWGG 2 cut(s) 132, 1801
PspGI CCWGG 2 cut(s) 132, 1801
PspN4I GGNNCC 3 cut(s) 148, 176, 191
PspPI GGNCC 4 cut(s) 112, 147, 190, 963
PspXI VCTCGAGB 2 cut(s) 473, 2048
PvuII CAGCTG 2 cut(s) 1837, 2221
RsaI GTAC 7 cut(s) 71, 299, 638, 1166, 1696, 1896, 2060
RsaNI GTAC 7 cut(s) 70, 298, 637, 1165, 1695, 1895, 2059
RseI CAYNNNNRTG 1 cut(s) 958
SacI GAGCTC 3 cut(s) 132, 165, 474
SapI GCTCTTC 2 cut(s) 1095, 1497
SaqAI TTAA 7 cut(s) 948, 1139, 1233, 1350, 1670, 1842, 1946
SatI GCNGC 5 cut(s) 47, 1722, 1835, 1838, 2222
Sau96I GGNCC 4 cut(s) 112, 147, 190, 963
ScaI AGTACT 1 cut(s) 1696
SchI GAGTC 5 cut(s) 26, 485, 773, 1306, 2060
ScrFI CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1803
SduI GDGCHC 5 cut(s) 132, 165, 474, 915, 2197
SfaNI GCATC 4 cut(s) 688, 1124, 1912, 2070
Sfr274I CTCGAG 2 cut(s) 473, 2048
SinI GGWCC 3 cut(s) 147, 190, 963
SlaI CTCGAG 2 cut(s) 473, 2048
SmiMI CAYNNNNRTG 1 cut(s) 958
SmlI CTYRAG 8 cut(s) 473, 1022, 1085, 1232, 1302, 1658, 1841, 2048
SmoI CTYRAG 8 cut(s) 473, 1022, 1085, 1232, 1302, 1658, 1841, 2048
SpeI ACTAGT 1 cut(s) 712
SsiI CCGC 4 cut(s) 46, 139, 172, 1722
SspMI CTAG 3 cut(s) 525, 713, 1043
SstI GAGCTC 3 cut(s) 132, 165, 474
StyD4I CCNGG 6 cut(s) 113, 132, 177, 186, 192, 1801
TaaI ACNGT 1 cut(s) 1605
TatI WGTACW 1 cut(s) 1694
TauI GCSGC 2 cut(s) 49, 1724
TfiI GAWTC 8 cut(s) 287, 904, 1214, 1481, 1598, 1816, 2023, 2113
Tru1I TTAA 7 cut(s) 948, 1139, 1233, 1350, 1670, 1842, 1946
Tru9I TTAA 7 cut(s) 948, 1139, 1233, 1350, 1670, 1842, 1946
TscAI CASTG 5 cut(s) 1224, 1608, 1945, 2033, 2197
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 3 cut(s) 1834, 1837, 2221
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 4 cut(s) 660, 719, 1242, 1253
TspGWI ACGGA 3 cut(s) 167, 1572, 2127
TspRI CASTG 5 cut(s) 1224, 1608, 1945, 2033, 2197
Vha464I CTTAAG 2 cut(s) 1232, 1841
VpaK11BI GGWCC 3 cut(s) 147, 190, 963
VspI ATTAAT 1 cut(s) 1946
XapI RAATTY 2 cut(s) 433, 1910
XceI RCATGY 2 cut(s) 338, 1179
XhoI CTCGAG 2 cut(s) 473, 2048
XmnI GAANNNNTTC 1 cut(s) 1104
XspI CTAG 3 cut(s) 525, 713, 1043
ZrmI AGTACT 1 cut(s) 1696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.