Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0014388

Physical Location & Seq

Genomic Coordinates Forward (+)

7677568 .. 7683555

Gene Structure 5988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0098000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGAAGGAAAAGATTGGATTTTTAGTGTTTGTTTGGTTTTTGCTATGTGGGTTTTGTGTGGGGAGGTTTGTGGTGGAGAAGAACAGCTTGAAAGTGACTTCCCCAAACTCATTGAAGGATGTTTATGAATGTGCAATTGGGAATTTTGGGGTTCCTCAGTATGGAGGAACCTTGGTTGGGACTGTGTATTATCCCAAGGCTAATCAAAAAGCATGCAAGAGTTTTGAAGATTTCGATATCTCATTCAAATCAAAGCCTGGTGGATTACCTACCTTTCTTCTTGCGGATCGAGGAGATTGTTACTTCACATTGAAGGCTTGGAATGCACAAAATGGTGGAGCGGCCGCTATTCTTGTTGCAGATGACAGAACTGAACCATTGATTACCATGGACACTCCTGAGGAAGAAAAGGAAGATGCTGATTATCTGCAGAAAATTGCAATTCCCTCGGCCCTTATCAGCAAATCTTTGGGGGATAGCATTAAAAAAGCTCTATCTGATGGGGAGATGGTCAACATTAATCTAGACTGGACAGAGGCTCTTCCACATCCTGACGAGCGAGTTGAGTATGAGTTCTGGACAAACAGCAATGATGAGTGTGGACCAAAGTGTGACAGCCAGATTGATTTTGTGAAGAACTTTAAAGGAGCTGCTCAGGTACTTGAGCGGAAGGGGTACACACAGTTTACTCCACACTATATCACTTGGTACTGCCCAGAAGCTTTTGTTTTGAGCAAACAGTGCAAGGCTCAGTGCATTAATCATGGGAGGTACTGTGCTCCAGATCCCGAACAGGATTTTAGTAAAGGTTATGATGGGAAAGATGTTGTGGTTCAAAATCTCCGTCAAGCTTGCTTCTATAAAGTGGCCAATGAAAGTGGAAGGCCATGGCTTTGGTGGGACTATGTGACTGACTTTGCGATTCGATGCCCAATGAAAGAGAAAAAGTACACTTCTGAGTGTGCAAATCAAGTTATTGAATCCTTGGGTGTTGATCTTAAGAAGATACAGAAATGTATTGGGGATCCTGAGGCAAATGAGGAGAATGCGGTTCTAAAGGCTGAACAGGATGCACAGATTGGCAAGGGCTCCCGTGGAGATGTTACCATATTGCCAACTCTTATTATAAACAACAGACAGTACAGAGGAAAACTGGCCAAAGGAGCTGTTCTCAAGGCCATCTGTGCTGGTTTTCAAGAAACTACTGAGCCTGCTGTGTGTTTGAGTGAAGAAGTGGAAACCAATGAATGCCTGGAAAACAATGGAGGTTGCTGGCAGGATAAAGCTTCTAACTTAACTGCATGCAGGGATACATTCCGGGGAAGAGTGTGTGAATGCCCTACTGTGCAAGGCGTGAAGTTTTTGGGTGATGGTTATACTCGCTGTGAAGCTTCCGGAGCGTTACGATGTGAAATCAACAATGGAGGTTGTTGGAGGGAAACTCAAAATGGCCACACTTACTCTGCATGTCGTGATGACCATACAAAAGGTTGCACGTGCCCGCCAGGATTCAAGGGTGATGGAGAGAAAACATGTGAAGATGTTGATGAGTGTAAGGAAAAAGTGGCTTGCCAATGTGCACAATGTAAATGCAAGAATACTTGGGGCAGTTACGAGTGCAGCTGTGGTGGTGATTTACTGTACATGCGAGAGCATGATGCATGTATAAGTCAAAATGCCAGGAATACAGAGTATAGCTGGAGCTTTGTCTGGGTTATCATTCTATGTTTGGGTGCTGTTGGAGTTGGAGGATATGCAGTTTACAAGTACAGAATCCGAAGATACATGGACTCGGAGATCCGGGCAATCATGGCACAGTACATGCCATTGGATAATCAAGGAGAAATTCCTAATCATGTCTCCCGTGGTGATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006629 GO:0006638 GO:0006639 GO:0006651 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008195 GO:0008610 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009507 GO:0009536 GO:0009856 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016462 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019538 GO:0022414 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0032501 GO:0032502 GO:0034645 GO:0036211 GO:0042175 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045017 GO:0046339 GO:0046460 GO:0046463 GO:0046486 GO:0047874 GO:0048856 GO:0048868 GO:0051704 GO:0070085 GO:0071704 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 map00510

Pfam Domains

Protein Families

PAP2

Protein Analysis

625

Amino Acids

69.77

Weight (kDa)

5.28

Isoelectric Point (pI)

34.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	60 - 161	9.3e-13	PA domain
VSR_TRX	PF25011	188 - 395	2.4e-105	Vacuolar sorting receptor thioredoxin-like domain
cEGF	PF12662	498 - 517	6.3e-07	Complement Clr-like EGF-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014388)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03080
fragaria_vesca	FvH4_6g15490 FvH4_6g15490 FvH4_6g15490
malus_domestica	MD04G1105500.v1.1 MD12G1123000.v1.1
prunus_persica	Prupe.6G240200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0468971
rosa_laevigata	RLG00000024394
rosa_multiflora	Rmu_sc0001639.1_g000006
rosa_roxburghii	Rroxscaffold_6G00412410
rosa_rugosa	Rorug03G0098000 Rorug03G0098100
rosa_samantha	Rh3AG147700 Rh3BG170300 Rh3DG204800
rosa_wichuraiana	Rw3G013900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1127
AccBSI	CCGCTC	2 cut(s)	341, 667
AccIII	TCCGGA	1 cut(s)	1394
AciI	CCGC	6 cut(s)	284, 341, 345, 667, 1049, 1502
AclWI	GGATC	5 cut(s)	294, 779, 1019, 1032, 1792
AcoI	YGGCCR	4 cut(s)	342, 867, 1155, 1450
AcsI	RAATTY	2 cut(s)	142, 1845
AcvI	CACGTG	1 cut(s)	1497
AfaI	GTAC	9 cut(s)	660, 677, 710, 773, 950, 1142, 1643, 1769, 1820
AfiI	CCNNNNNNNGG	2 cut(s)	161, 177
AflII	CTTAAG	1 cut(s)	998
AflIII	ACRYGT	1 cut(s)	1532
AgsI	TTSAA	9 cut(s)	91, 115, 227, 247, 313, 836, 980, 1196, 1513
AjnI	CCWGG	4 cut(s)	256, 1251, 1504, 1679
AjuI	GAANNNNNNNTTGG	2 cut(s)	120, 152
Alw21I	GWGCWC	2 cut(s)	781, 1582
Alw26I	GTCTC	1 cut(s)	1864
Alw44I	GTGCAC	1 cut(s)	1578
AlwI	GGATC	5 cut(s)	294, 779, 1019, 1032, 1792
Aor13HI	TCCGGA	1 cut(s)	1394
AoxI	GGCC	7 cut(s)	342, 450, 867, 884, 1155, 1176, 1450
ApaLI	GTGCAC	1 cut(s)	1578
ApeKI	GCWGC	2 cut(s)	650, 1620
ApoI	RAATTY	2 cut(s)	142, 1845
ArsI	GACNNNNNNTTYG	2 cut(s)	829, 861
AseI	ATTAAT	2 cut(s)	519, 759
AspS9I	GGNCC	2 cut(s)	451, 602
AsuC2I	CCSGG	2 cut(s)	1319, 1802
AsuHPI	GGTGA	3 cut(s)	1379, 1529, 1643
AvaII	GGWCC	1 cut(s)	602
AxyI	CCTNAGG	2 cut(s)	399, 1029
BaeGI	GKGCMC	2 cut(s)	1502, 1582
BalI	TGGCCA	3 cut(s)	869, 1157, 1452
BamHI	GGATCC	1 cut(s)	1024
BanII	GRGCYC	1 cut(s)	1091
BbrPI	CACGTG	1 cut(s)	1497
Bbv12I	GWGCWC	2 cut(s)	781, 1582
BbvI	GCAGC	2 cut(s)	637, 1632
BccI	CCATC	6 cut(s)	494, 502, 809, 1187, 1364, 1514
BcgI	CGANNNNNNTGC	2 cut(s)	429, 463
BciT130I	CCWGG	4 cut(s)	258, 1253, 1506, 1681
BciVI	GTATCC	1 cut(s)	1303
BcnI	CCSGG	2 cut(s)	1319, 1802
BcoDI	GTCTC	1 cut(s)	1864
BfaI	CTAG	1 cut(s)	524
BfmI	CTRYAG	1 cut(s)	428
BfrI	CTTAAG	1 cut(s)	998
BfuI	GTATCC	1 cut(s)	1303
BisI	GCNGC	4 cut(s)	342, 345, 651, 1621
BlsI	GCNGC	4 cut(s)	343, 346, 652, 1622
Bme1390I	CCNGG	6 cut(s)	258, 1253, 1319, 1506, 1681, 1802
Bme18I	GGWCC	1 cut(s)	602
BmgT120I	GGNCC	2 cut(s)	451, 602
BmiI	GGNNCC	4 cut(s)	153, 169, 1026, 1090
BmrFI	CCNGG	6 cut(s)	258, 1253, 1319, 1506, 1681, 1802
BmsI	GCATC	4 cut(s)	406, 917, 1060, 1648
BplI	GAGNNNNNCTC	4 cut(s)	1155, 1187, 1426, 1458
BpmI	CTGGAG	2 cut(s)	765, 1720
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	2 cut(s)	683, 1157
BpuMI	CCSGG	2 cut(s)	1319, 1802
BsaAI	YACGTR	1 cut(s)	1497
BsaJI	CCNNGG	9 cut(s)	171, 195, 387, 447, 887, 984, 1093, 1318, 1864
BsaWI	WCCGGW	1 cut(s)	1394
BsaXI	ACNNNNNCTCC	2 cut(s)	760, 790
Bsc4I	CCNNNNNNNGG	2 cut(s)	161, 177
Bse1I	ACTGG	2 cut(s)	533, 1158
Bse21I	CCTNAGG	2 cut(s)	399, 1029
Bse3DI	GCAATG	1 cut(s)	595
BseAI	TCCGGA	1 cut(s)	1394
BseBI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
BseDI	CCNNGG	9 cut(s)	171, 195, 387, 447, 887, 984, 1093, 1318, 1864
BseGI	GGATG	3 cut(s)	124, 547, 1075
BseLI	CCNNNNNNNGG	2 cut(s)	161, 177
BseMI	GCAATG	1 cut(s)	595
BseMII	CTCAG	7 cut(s)	170, 390, 668, 764, 948, 1020, 1197
BseNI	ACTGG	2 cut(s)	533, 1158
BseRI	GAGGAG	2 cut(s)	306, 1055
BseSI	GKGCMC	2 cut(s)	1502, 1582
BseX3I	CGGCCG	1 cut(s)	342
BseXI	GCAGC	2 cut(s)	637, 1632
BsgI	GTGCAG	1 cut(s)	1639
Bsh1285I	CGRYCG	1 cut(s)	345
BshFI	GGCC	7 cut(s)	344, 452, 869, 886, 1157, 1178, 1452
BsiEI	CGRYCG	1 cut(s)	345
BsiHKAI	GWGCWC	2 cut(s)	781, 1582
BsiSI	CCGG	3 cut(s)	1318, 1395, 1801
BslFI	GGGAC	2 cut(s)	193, 914
BslI	CCNNNNNNNGG	2 cut(s)	161, 177
BsmAI	GTCTC	1 cut(s)	1864
BsmFI	GGGAC	2 cut(s)	193, 914
BsmI	GAATGC	4 cut(s)	328, 1051, 1253, 1340
BsnI	GGCC	7 cut(s)	344, 452, 869, 886, 1157, 1178, 1452
Bsp1286I	GDGCHC	4 cut(s)	781, 1091, 1502, 1582
Bsp13I	TCCGGA	1 cut(s)	1394
Bsp1407I	TGTACA	1 cut(s)	1641
Bsp143I	GATC	5 cut(s)	286, 784, 994, 1024, 1797
Bsp19I	CCATGG	2 cut(s)	387, 887
BspACI	CCGC	6 cut(s)	284, 341, 345, 667, 1049, 1502
BspANI	GGCC	7 cut(s)	344, 452, 869, 886, 1157, 1178, 1452
BspCNI	CTCAG	7 cut(s)	169, 391, 667, 763, 949, 1021, 1198
BspEI	TCCGGA	1 cut(s)	1394
BspLI	GGNNCC	4 cut(s)	153, 169, 1026, 1090
BspMAI	CTGCAG	1 cut(s)	432
BspPI	GGATC	5 cut(s)	294, 779, 1019, 1032, 1792
BspQI	GCTCTTC	1 cut(s)	546
BspTI	CTTAAG	1 cut(s)	998
BsrBI	CCGCTC	2 cut(s)	341, 667
BsrDI	GCAATG	1 cut(s)	595
BsrGI	TGTACA	1 cut(s)	1641
BsrI	ACTGG	2 cut(s)	533, 1158
BssECI	CCNNGG	9 cut(s)	171, 195, 387, 447, 887, 984, 1093, 1318, 1864
BssMI	GATC	5 cut(s)	286, 784, 994, 1024, 1797
BssT1I	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
Bst2UI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
Bst4CI	ACNGT	8 cut(s)	184, 684, 741, 776, 1140, 1345, 1641, 1818
Bst6I	CTCTTC	2 cut(s)	546, 1318
BstAFI	CTTAAG	1 cut(s)	998
BstAPI	GCANNNNNTGC	1 cut(s)	741
BstAUI	TGTACA	1 cut(s)	1641
BstBAI	YACGTR	1 cut(s)	1497
BstC8I	GCNNGC	7 cut(s)	214, 853, 1212, 1274, 1303, 1502, 1570
BstDEI	CTNAG	7 cut(s)	156, 399, 654, 750, 957, 1029, 1206
BstDSI	CCRYGG	4 cut(s)	387, 887, 1093, 1864
BstF5I	GGATG	3 cut(s)	124, 547, 1075
BstKTI	GATC	5 cut(s)	289, 787, 997, 1027, 1800
BstMAI	GTCTC	1 cut(s)	1864
BstMBI	GATC	5 cut(s)	286, 784, 994, 1024, 1797
BstMCI	CGRYCG	1 cut(s)	345
BstMWI	GCNNNNNNNGC	6 cut(s)	323, 741, 1163, 1184, 1397, 1811
BstNI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
BstNSI	RCATGY	7 cut(s)	216, 1305, 1470, 1536, 1648, 1665, 1825
BstSCI	CCNGG	6 cut(s)	256, 1251, 1317, 1504, 1679, 1800
BstSFI	CTRYAG	1 cut(s)	428
BstSLI	GKGCMC	2 cut(s)	1502, 1582
BstV1I	GCAGC	2 cut(s)	637, 1632
BstX2I	RGATCY	3 cut(s)	784, 1024, 1797
BstXI	CCANNNNNNTGG	1 cut(s)	894
BstYI	RGATCY	3 cut(s)	784, 1024, 1797
BstZI	CGGCCG	1 cut(s)	342
Bsu36I	CCTNAGG	2 cut(s)	399, 1029
BsuI	GTATCC	1 cut(s)	1303
BsuRI	GGCC	7 cut(s)	344, 452, 869, 886, 1157, 1178, 1452
BtgI	CCRYGG	4 cut(s)	387, 887, 1093, 1864
BtsCI	GGATG	3 cut(s)	124, 547, 1075
BtsIMutI	CAGTG	2 cut(s)	746, 758
Cac8I	GCNNGC	7 cut(s)	214, 853, 1212, 1274, 1303, 1502, 1570
CciNI	GCGGCCGC	1 cut(s)	342
Cfr13I	GGNCC	2 cut(s)	451, 602
Csp6I	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1642, 1768, 1819
CspCI	CAANNNNNGTGG	2 cut(s)	859, 894
CviQI	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1642, 1768, 1819
DdeI	CTNAG	7 cut(s)	156, 399, 654, 750, 957, 1029, 1206
DpnI	GATC	5 cut(s)	288, 786, 996, 1026, 1799
DpnII	GATC	5 cut(s)	286, 784, 994, 1024, 1797
DraI	TTTAAA	1 cut(s)	643
EaeI	YGGCCR	4 cut(s)	342, 867, 1155, 1450
EagI	CGGCCG	1 cut(s)	342
Eam1104I	CTCTTC	2 cut(s)	546, 1318
EarI	CTCTTC	2 cut(s)	546, 1318
EclXI	CGGCCG	1 cut(s)	342
Eco130I	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
Eco24I	GRGCYC	1 cut(s)	1091
Eco32I	GATATC	2 cut(s)	238, 1873
Eco47I	GGWCC	1 cut(s)	602
Eco52I	CGGCCG	1 cut(s)	342
Eco72I	CACGTG	1 cut(s)	1497
Eco81I	CCTNAGG	2 cut(s)	399, 1029
EcoRII	CCWGG	4 cut(s)	256, 1251, 1504, 1679
EcoRV	GATATC	2 cut(s)	238, 1873
EcoT14I	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
EcoT22I	ATGCAT	1 cut(s)	1663
EcoT38I	GRGCYC	1 cut(s)	1091
ErhI	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
FalI	AAGNNNNNCTT	2 cut(s)	71, 103
FaqI	GGGAC	2 cut(s)	193, 914
FauI	CCCGC	1 cut(s)	1509
Fnu4HI	GCNGC	4 cut(s)	342, 345, 651, 1621
FokI	GGATG	3 cut(s)	131, 534, 1082
FriOI	GRGCYC	1 cut(s)	1091
Fsp4HI	GCNGC	4 cut(s)	342, 345, 651, 1621
FspBI	CTAG	1 cut(s)	524
GluI	GCNGC	4 cut(s)	342, 345, 651, 1621
GsuI	CTGGAG	2 cut(s)	765, 1720
HaeIII	GGCC	7 cut(s)	344, 452, 869, 886, 1157, 1178, 1452
HapII	CCGG	3 cut(s)	1318, 1395, 1801
HincII	GTYRAC	1 cut(s)	514
HindII	GTYRAC	1 cut(s)	514
HindIII	AAGCTT	4 cut(s)	720, 849, 1284, 1389
HinfI	GANTC	5 cut(s)	922, 980, 1509, 1773, 1790
HpaII	CCGG	3 cut(s)	1318, 1395, 1801
HphI	GGTGA	3 cut(s)	1379, 1529, 1643
Hpy166II	GTNNAC	7 cut(s)	514, 602, 678, 687, 951, 1580, 1762
Hpy188I	TCNGA	5 cut(s)	499, 958, 1778, 1795, 1877
Hpy8I	GTNNAC	7 cut(s)	514, 602, 678, 687, 951, 1580, 1762
HpyAV	CCTTC	4 cut(s)	109, 307, 664, 876
HpyCH4III	ACNGT	8 cut(s)	184, 684, 741, 776, 1140, 1345, 1641, 1818
HpyCH4IV	ACGT	1 cut(s)	1496
HpyF10VI	GCNNNNNNNGC	6 cut(s)	323, 741, 1163, 1184, 1397, 1811
HpyF3I	CTNAG	7 cut(s)	156, 399, 654, 750, 957, 1029, 1206
HpySE526I	ACGT	1 cut(s)	1496
Kpn2I	TCCGGA	1 cut(s)	1394
Kzo9I	GATC	5 cut(s)	286, 784, 994, 1024, 1797
LguI	GCTCTTC	1 cut(s)	546
LmnI	GCTCC	7 cut(s)	338, 647, 784, 1094, 1163, 1397, 1701
Lsp1109I	GCAGC	2 cut(s)	637, 1632
LweI	GCATC	4 cut(s)	406, 917, 1060, 1648
MaeI	CTAG	1 cut(s)	524
MaeII	ACGT	1 cut(s)	1496
MaeIII	GTNAC	7 cut(s)	94, 299, 611, 907, 1102, 1401, 1610
MalI	GATC	5 cut(s)	288, 786, 996, 1026, 1799
MbiI	CCGCTC	2 cut(s)	341, 667
MboI	GATC	5 cut(s)	286, 784, 994, 1024, 1797
MfeI	CAATTG	1 cut(s)	135
MflI	RGATCY	3 cut(s)	784, 1024, 1797
MhlI	GDGCHC	4 cut(s)	781, 1091, 1502, 1582
MlsI	TGGCCA	3 cut(s)	869, 1157, 1452
MluCI	AATT	5 cut(s)	135, 142, 435, 441, 1845
MluNI	TGGCCA	3 cut(s)	869, 1157, 1452
MlyI	GAGTC	1 cut(s)	1784
MmeI	TCCRAC	3 cut(s)	1412, 1720, 1726
Mox20I	TGGCCA	3 cut(s)	869, 1157, 1452
Mph1103I	ATGCAT	1 cut(s)	1663
MroI	TCCGGA	1 cut(s)	1394
MscI	TGGCCA	3 cut(s)	869, 1157, 1452
MseI	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
Msp20I	TGGCCA	3 cut(s)	869, 1157, 1452
MspA1I	CMGCKG	1 cut(s)	1623
MspCI	CTTAAG	1 cut(s)	998
MspI	CCGG	3 cut(s)	1318, 1395, 1801
MspR9I	CCNGG	6 cut(s)	258, 1253, 1319, 1506, 1681, 1802
MunI	CAATTG	1 cut(s)	135
Mva1269I	GAATGC	4 cut(s)	328, 1051, 1253, 1340
MvaI	CCWGG	4 cut(s)	258, 1253, 1506, 1681
MwoI	GCNNNNNNNGC	6 cut(s)	323, 741, 1163, 1184, 1397, 1811
NciI	CCSGG	2 cut(s)	1319, 1802
NcoI	CCATGG	2 cut(s)	387, 887
NdeII	GATC	5 cut(s)	286, 784, 994, 1024, 1797
NlaIV	GGNNCC	4 cut(s)	153, 169, 1026, 1090
NmeAIII	GCCGAG	1 cut(s)	428
NmuCI	GTSAC	3 cut(s)	94, 611, 907
NotI	GCGGCCGC	1 cut(s)	342
NsiI	ATGCAT	1 cut(s)	1663
NspI	RCATGY	7 cut(s)	216, 1305, 1470, 1536, 1648, 1665, 1825
PaeI	GCATGC	2 cut(s)	216, 1305
PciI	ACATGT	1 cut(s)	1532
PciSI	GCTCTTC	1 cut(s)	546
PctI	GAATGC	4 cut(s)	328, 1051, 1253, 1340
PfeI	GAWTC	4 cut(s)	922, 980, 1509, 1773
PkrI	GCNGC	4 cut(s)	343, 346, 652, 1622
PleI	GAGTC	1 cut(s)	1784
PmaCI	CACGTG	1 cut(s)	1497
PmlI	CACGTG	1 cut(s)	1497
PpsI	GAGTC	1 cut(s)	1784
Ppu21I	YACGTR	1 cut(s)	1497
PscI	ACATGT	1 cut(s)	1532
PshBI	ATTAAT	2 cut(s)	519, 759
PsiI	TTATAA	1 cut(s)	1127
Psp6I	CCWGG	4 cut(s)	256, 1251, 1504, 1679
PspCI	CACGTG	1 cut(s)	1497
PspGI	CCWGG	4 cut(s)	256, 1251, 1504, 1679
PspN4I	GGNNCC	4 cut(s)	153, 169, 1026, 1090
PspPI	GGNCC	2 cut(s)	451, 602
PstI	CTGCAG	1 cut(s)	432
PsuI	RGATCY	3 cut(s)	784, 1024, 1797
PvuII	CAGCTG	1 cut(s)	1623
RsaI	GTAC	9 cut(s)	660, 677, 710, 773, 950, 1142, 1643, 1769, 1820
RsaNI	GTAC	9 cut(s)	659, 676, 709, 772, 949, 1141, 1642, 1768, 1819
SapI	GCTCTTC	1 cut(s)	546
SaqAI	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
SatI	GCNGC	4 cut(s)	342, 345, 651, 1621
Sau3AI	GATC	5 cut(s)	286, 784, 994, 1024, 1797
Sau96I	GGNCC	2 cut(s)	451, 602
SchI	GAGTC	1 cut(s)	1784
ScrFI	CCNGG	6 cut(s)	258, 1253, 1319, 1506, 1681, 1802
SduI	GDGCHC	4 cut(s)	781, 1091, 1502, 1582
SfaNI	GCATC	4 cut(s)	406, 917, 1060, 1648
SfcI	CTRYAG	1 cut(s)	428
SinI	GGWCC	1 cut(s)	602
SmlI	CTYRAG	3 cut(s)	662, 998, 1172
SmoI	CTYRAG	3 cut(s)	662, 998, 1172
SphI	GCATGC	2 cut(s)	216, 1305
Sse9I	AATT	5 cut(s)	135, 142, 435, 441, 1845
SsiI	CCGC	6 cut(s)	284, 341, 345, 667, 1049, 1502
SspMI	CTAG	1 cut(s)	524
StyD4I	CCNGG	6 cut(s)	256, 1251, 1317, 1504, 1679, 1800
StyI	CCWWGG	5 cut(s)	171, 195, 387, 887, 984
TaaI	ACNGT	8 cut(s)	184, 684, 741, 776, 1140, 1345, 1641, 1818
TaiI	ACGT	1 cut(s)	1499
TaqI	TCGA	3 cut(s)	234, 289, 925
TasI	AATT	5 cut(s)	135, 142, 435, 441, 1845
TatI	WGTACW	5 cut(s)	948, 1140, 1641, 1767, 1818
TauI	GCSGC	2 cut(s)	344, 347
TfiI	GAWTC	4 cut(s)	922, 980, 1509, 1773
Tru1I	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
Tru9I	TTAA	6 cut(s)	483, 519, 642, 759, 999, 1295
TscAI	CASTG	2 cut(s)	746, 758
TseFI	GTSAC	3 cut(s)	94, 611, 907
TseI	GCWGC	2 cut(s)	650, 1620
Tsp45I	GTSAC	3 cut(s)	94, 611, 907
TspDTI	ATGAA	5 cut(s)	17, 141, 888, 950, 1260
TspGWI	ACGGA	1 cut(s)	833
TspRI	CASTG	2 cut(s)	746, 758
Vha464I	CTTAAG	1 cut(s)	998
VneI	GTGCAC	1 cut(s)	1578
VpaK11BI	GGWCC	1 cut(s)	602
VspI	ATTAAT	2 cut(s)	519, 759
XapI	RAATTY	2 cut(s)	142, 1845
XbaI	TCTAGA	1 cut(s)	523
XceI	RCATGY	7 cut(s)	216, 1305, 1470, 1536, 1648, 1665, 1825
XcmI	CCANNNNNNNNNTGG	2 cut(s)	894, 1249
XspI	CTAG	1 cut(s)	524
Zsp2I	ATGCAT	1 cut(s)	1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.