Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0011633

Physical Location & Seq

Genomic Coordinates Forward (+)

13292131 .. 13294643

Gene Structure 2513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0160300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGATGTCCGGTGATGGCTATTCACTTATACCTTCTGCCATGGAAGGGTTCGATCATCAATTGAACCCAGCAAACCCTAGCCAGAAATCCAATCCTGTGGTCAAGAAGAAGCGGAATCTACCAGGAACGCCAGATCCAGATGCCGAGGTTATTGCCTTATCTCCCACCACACTTATGGCAACGAACAGATTCATCTGCGAGATATGCAACAAGGGTTTCCAAAGGGACCAGAACTTACAGCTTCATCGAAGAGGTCACAATCTTCCATGGAAGCTTAGGCAAAGAACGAACAAGGATGTGATCAAGAAGAAGGTCTACATTTGCCCCGAGAAGACCTGCGTCCACCACGATCCTTCGAGAGCTCTTGGAGACCTTACCGGAATCAAGAAGCATTTCAGCCGGAAACACGGCGAGAAGAAGTGGAAGTGCGAGAAGTGTTCGAAGAAATACGCAGTCCAATCGGATTGGAAAGCTCACTCCAAGACCTGCGGGACTAGGGAGTATAAGTGCGACTGTGGAACTCTATTTTCCAGGAAAGATAGCTTCATCACGCATAGAGCATTTTGTGATGCCCTAACTGAAGAGAGTGCTAGGCTCACTTCAGCTGCAGCAGCTGCTACAAATCTCAACTTTGGAAATGATCCTACAGTAAACAACACCATGATTAATTCTCAAGCTGTTCAAGATGTTTCTCAAATCTCTGATTTCGACAAGCCCAGCAGATTATCGTTTTGGCTGAATCAGCAGCCAAACAATCTCAATGTGATGGACATGGCAGCTGCAAATCCTAATAATCTGTATGAAATGGTGCAAATGGGATCTGCCACTAGTCTATTTGGCTCAAATTCTATGTCCAATTTCGGTGCCTCTACTTCAACAAGTTCTGCGAATCTCTCCTTATCATCACCGATAGGACTAAAAGATCAAGAAGTCAGAAATATTAAAGCCAACATTATAAGCAAGCCGCCAGCAGCGCCCATGTCCGCCACAGCGCTGCTGCAGAAAGCGGCCCAGTTGGGCTCTACTCGAAGCGGCAACCAACCGCTTTCGGGCAGCAGCGTAGGTGTAATGACCTCGCCTTCTTCCTCAAACACAATGAGCTTCAACAGCAGGTCAAATGAGCTTAACCAACTTTTTCAATCGAGCACTACTACTTCATCGAATCTGGTTAGCTCGTTAAGTTGTTCATCGAATAGTCTCGAACAGGTAATGAAATTCGGTGGCGCAAATTCGAATGCGATTGATCATCAGAATAGTCTAACTAGAGACTTTTTGGGCGTGGGAGATCGTCAAATTCATAATAGGCAGTTCTTGCCACATGAGCTAGCCAAGTTTGGTTCGATGAGTTCAGCTGCTATGGGATTGAGTCCATTCACTGGCAACCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

462

Amino Acids

50.38

Weight (kDa)

9.39

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	102 - 136	7.6e-22	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	140 - 164	1.2e-14	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	167 - 205	2.4e-23	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011633)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38910
fragaria_vesca	FvH4_6g21020
malus_domestica	MD12G1046000.v1.1 MD14G1044700.v1.1
prunus_persica	Prupe.7G089600_v2.0.a1 Prupe.7G089600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0477401
rosa_laevigata	RLG00000023725
rosa_multiflora	Rmu_ssc0000341.1_g000023
rosa_roxburghii	Rroxscaffold_6G00404200 Rroxscaffold_6G00404680 Rroxscaffold_6G00404690
rosa_rugosa	Rorug03G0160200 Rorug03G0160300 Rorug03G0160400
rosa_samantha	Rh3AG210700 Rh3CG237800 Rh3DG237500
rosa_wichuraiana	Rw3G019090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	956
Acc36I	ACCTGC	3 cut(s)	344, 494, 1101
AccB1I	GGYRCC	1 cut(s)	863
AccB7I	CCANNNNNTGG	1 cut(s)	1376
AccI	GTMKAC	1 cut(s)	315
AciI	CCGC	7 cut(s)	112, 489, 965, 984, 1007, 1032, 1043
AclWI	GGATC	4 cut(s)	128, 344, 635, 826
AcsI	RAATTY	4 cut(s)	844, 1214, 1228, 1293
AcuI	CTGAAG	2 cut(s)	585, 600
AfeI	AGCGCT	1 cut(s)	993
AfiI	CCNNNNNNNGG	3 cut(s)	45, 1049, 1376
AgsI	TTSAA	5 cut(s)	64, 683, 876, 1105, 1139
AhlI	ACTAGT	1 cut(s)	827
AjnI	CCWGG	2 cut(s)	121, 530
AloI	GAACNNNNNNTCC	2 cut(s)	118, 150
Alw21I	GWGCWC	2 cut(s)	364, 1148
Alw26I	GTCTC	3 cut(s)	363, 1202, 1260
AlwI	GGATC	4 cut(s)	128, 344, 635, 826
AlwNI	CAGNNNCTG	1 cut(s)	614
Ama87I	CYCGRG	1 cut(s)	326
Aor51HI	AGCGCT	1 cut(s)	993
AoxI	GGCC	1 cut(s)	1008
ApoI	RAATTY	4 cut(s)	844, 1214, 1228, 1293
ArsI	GACNNNNNNTTYG	2 cut(s)	836, 868
AseI	ATTAAT	1 cut(s)	666
Asp700I	GAANNNNTTC	2 cut(s)	188, 392
AspLEI	GCGC	3 cut(s)	976, 994, 1226
AspS9I	GGNCC	2 cut(s)	226, 1009
AsuHPI	GGTGA	2 cut(s)	23, 897
AsuII	TTCGAA	2 cut(s)	440, 1232
AsuNHI	GCTAGC	1 cut(s)	1324
AvaI	CYCGRG	1 cut(s)	326
AvaII	GGWCC	1 cut(s)	226
BanI	GGYRCC	1 cut(s)	863
BanII	GRGCYC	2 cut(s)	364, 1022
BarI	GAAGNNNNNNTAC	2 cut(s)	299, 331
BbsI	GAAGAC	1 cut(s)	338
Bbv12I	GWGCWC	2 cut(s)	364, 1148
BccI	CCATC	2 cut(s)	8, 760
BceAI	ACGGC	1 cut(s)	424
BcgI	CGANNNNNNTGC	4 cut(s)	134, 168, 441, 475
BciT130I	CCWGG	2 cut(s)	123, 532
BclI	TGATCA	2 cut(s)	300, 1243
BcoDI	GTCTC	3 cut(s)	363, 1202, 1260
BcuI	ACTAGT	1 cut(s)	827
BfaI	CTAG	6 cut(s)	78, 495, 591, 828, 1263, 1325
BfmI	CTRYAG	3 cut(s)	606, 645, 998
BfoI	RGCGCY	2 cut(s)	977, 995
BfuAI	ACCTGC	3 cut(s)	344, 494, 1101
Bme1390I	CCNGG	2 cut(s)	123, 532
Bme18I	GGWCC	1 cut(s)	226
BmeT110I	CYCGRG	1 cut(s)	326
BmgT120I	GGNCC	2 cut(s)	226, 1009
BmiI	GGNNCC	2 cut(s)	227, 865
BmrFI	CCNGG	2 cut(s)	123, 532
BmrI	ACTGGG	1 cut(s)	1006
BmsI	GCATC	2 cut(s)	130, 559
BmtI	GCTAGC	1 cut(s)	1328
BmuI	ACTGGG	1 cut(s)	1006
BoxI	GACNNNNGTC	1 cut(s)	338
BpiI	GAAGAC	1 cut(s)	338
Bpu10I	CCTNAGC	1 cut(s)	275
Bpu14I	TTCGAA	2 cut(s)	440, 1232
BpuEI	CTTGAG	1 cut(s)	657
BsaI	GGTCTC	1 cut(s)	363
BsaJI	CCNNGG	3 cut(s)	39, 144, 266
BsaWI	WCCGGW	2 cut(s)	8, 377
BsaXI	ACNNNNNCTCC	2 cut(s)	491, 521
Bsc4I	CCNNNNNNNGG	3 cut(s)	45, 1049, 1376
Bse1I	ACTGG	2 cut(s)	1012, 1381
BseBI	CCWGG	2 cut(s)	123, 532
BseDI	CCNNGG	3 cut(s)	39, 144, 266
BseGI	GGATG	1 cut(s)	301
BseLI	CCNNNNNNNGG	3 cut(s)	45, 1049, 1376
BseNI	ACTGG	2 cut(s)	1012, 1381
BseYI	CCCAGC	2 cut(s)	67, 716
BshFI	GGCC	1 cut(s)	1010
BshNI	GGYRCC	1 cut(s)	863
BsiHKAI	GWGCWC	2 cut(s)	364, 1148
BsiHKCI	CYCGRG	1 cut(s)	326
BsiSI	CCGG	3 cut(s)	9, 378, 400
BslFI	GGGAC	2 cut(s)	239, 505
BslI	CCNNNNNNNGG	3 cut(s)	45, 1049, 1376
BsmAI	GTCTC	3 cut(s)	363, 1202, 1260
BsmFI	GGGAC	2 cut(s)	239, 505
BsmI	GAATGC	1 cut(s)	1240
BsnI	GGCC	1 cut(s)	1010
Bso31I	GGTCTC	1 cut(s)	363
BsoBI	CYCGRG	1 cut(s)	326
Bsp119I	TTCGAA	2 cut(s)	440, 1232
Bsp1286I	GDGCHC	3 cut(s)	364, 1022, 1148
Bsp143I	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
Bsp19I	CCATGG	2 cut(s)	39, 266
BspACI	CCGC	7 cut(s)	112, 489, 965, 984, 1007, 1032, 1043
BspANI	GGCC	1 cut(s)	1010
BspLI	GGNNCC	2 cut(s)	227, 865
BspMAI	CTGCAG	2 cut(s)	610, 1002
BspMI	ACCTGC	3 cut(s)	344, 494, 1101
BspOI	GCTAGC	1 cut(s)	1328
BspPI	GGATC	4 cut(s)	128, 344, 635, 826
BspT104I	TTCGAA	2 cut(s)	440, 1232
BspT107I	GGYRCC	1 cut(s)	863
BspTNI	GGTCTC	1 cut(s)	363
BsrI	ACTGG	2 cut(s)	1012, 1381
BssECI	CCNNGG	3 cut(s)	39, 144, 266
BssMI	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
BssT1I	CCWWGG	2 cut(s)	39, 266
Bst2UI	CCWGG	2 cut(s)	123, 532
Bst4CI	ACNGT	2 cut(s)	515, 649
Bst6I	CTCTTC	2 cut(s)	244, 576
BstAPI	GCANNNNNTGC	2 cut(s)	614, 1312
BstBI	TTCGAA	2 cut(s)	440, 1232
BstC8I	GCNNGC	3 cut(s)	962, 969, 1326
BstDEI	CTNAG	1 cut(s)	275
BstDSI	CCRYGG	2 cut(s)	39, 266
BstF5I	GGATG	1 cut(s)	301
BstH2I	RGCGCY	2 cut(s)	977, 995
BstHHI	GCGC	3 cut(s)	976, 994, 1226
BstKTI	GATC	9 cut(s)	55, 136, 303, 352, 643, 821, 925, 1246, 1288
BstMAI	GTCTC	3 cut(s)	363, 1202, 1260
BstMBI	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
BstMWI	GCNNNNNNNGC	8 cut(s)	204, 611, 614, 742, 973, 1107, 1312, 1321
BstNI	CCWGG	2 cut(s)	123, 532
BstPAI	GACNNNNGTC	1 cut(s)	338
BstSCI	CCNGG	2 cut(s)	121, 530
BstSFI	CTRYAG	3 cut(s)	606, 645, 998
BstV2I	GAAGAC	1 cut(s)	338
BstX2I	RGATCY	2 cut(s)	133, 818
BstXI	CCANNNNNNTGG	2 cut(s)	97, 175
BstYI	RGATCY	2 cut(s)	133, 818
BsuRI	GGCC	1 cut(s)	1010
BtgI	CCRYGG	2 cut(s)	39, 266
BtsCI	GGATG	1 cut(s)	301
BtsIMutI	CAGTG	2 cut(s)	1374, 1384
BveI	ACCTGC	3 cut(s)	344, 494, 1101
Cac8I	GCNNGC	3 cut(s)	962, 969, 1326
CaiI	CAGNNNCTG	1 cut(s)	614
CfoI	GCGC	3 cut(s)	976, 994, 1226
Cfr13I	GGNCC	2 cut(s)	226, 1009
CseI	GACGC	1 cut(s)	328
CviAII	CATG	6 cut(s)	40, 267, 661, 772, 979, 1319
DdeI	CTNAG	1 cut(s)	275
DpnI	GATC	9 cut(s)	54, 135, 302, 351, 642, 820, 924, 1245, 1287
DpnII	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
Eam1104I	CTCTTC	2 cut(s)	244, 576
EarI	CTCTTC	2 cut(s)	244, 576
EciI	GGCGGA	1 cut(s)	973
Ecl136II	GAGCTC	1 cut(s)	362
Eco130I	CCWWGG	2 cut(s)	39, 266
Eco24I	GRGCYC	2 cut(s)	364, 1022
Eco31I	GGTCTC	1 cut(s)	363
Eco47I	GGWCC	1 cut(s)	226
Eco47III	AGCGCT	1 cut(s)	993
Eco53kI	GAGCTC	1 cut(s)	362
Eco57I	CTGAAG	2 cut(s)	585, 600
Eco88I	CYCGRG	1 cut(s)	326
EcoICRI	GAGCTC	1 cut(s)	362
EcoRII	CCWGG	2 cut(s)	121, 530
EcoT14I	CCWWGG	2 cut(s)	39, 266
EcoT38I	GRGCYC	2 cut(s)	364, 1022
ErhI	CCWWGG	2 cut(s)	39, 266
FaeI	CATG	6 cut(s)	43, 270, 664, 775, 982, 1322
FaqI	GGGAC	2 cut(s)	239, 505
FatI	CATG	6 cut(s)	39, 266, 660, 771, 978, 1318
FauI	CCCGC	1 cut(s)	482
FbaI	TGATCA	2 cut(s)	300, 1243
FblI	GTMKAC	1 cut(s)	315
FokI	GGATG	1 cut(s)	308
FriOI	GRGCYC	2 cut(s)	364, 1022
FspBI	CTAG	6 cut(s)	78, 495, 591, 828, 1263, 1325
GlaI	GCGC	3 cut(s)	975, 993, 1225
GsaI	CCCAGC	2 cut(s)	71, 720
HaeII	RGCGCY	2 cut(s)	977, 995
HaeIII	GGCC	1 cut(s)	1010
HapII	CCGG	3 cut(s)	9, 378, 400
HgaI	GACGC	1 cut(s)	328
HhaI	GCGC	3 cut(s)	976, 994, 1226
Hin1II	CATG	6 cut(s)	43, 270, 664, 775, 982, 1322
Hin6I	GCGC	3 cut(s)	974, 992, 1224
HinP1I	GCGC	3 cut(s)	974, 992, 1224
HindIII	AAGCTT	1 cut(s)	272
HinfI	GANTC	7 cut(s)	115, 189, 381, 739, 889, 1162, 1366
HpaII	CCGG	3 cut(s)	9, 378, 400
HphI	GGTGA	2 cut(s)	23, 897
Hpy166II	GTNNAC	3 cut(s)	316, 343, 652
Hpy188I	TCNGA	4 cut(s)	463, 703, 935, 1251
Hpy188III	TCNNGA	8 cut(s)	103, 137, 304, 357, 385, 683, 926, 1199
Hpy8I	GTNNAC	3 cut(s)	316, 343, 652
HpyAV	CCTTC	5 cut(s)	38, 42, 304, 363, 1089
HpyCH4III	ACNGT	2 cut(s)	515, 649
HpyCH4V	TGCA	5 cut(s)	207, 608, 782, 811, 1000
HpyF10VI	GCNNNNNNNGC	8 cut(s)	204, 611, 614, 742, 973, 1107, 1312, 1321
HpyF3I	CTNAG	1 cut(s)	275
Hsp92II	CATG	6 cut(s)	43, 270, 664, 775, 982, 1322
HspAI	GCGC	3 cut(s)	974, 992, 1224
Ksp22I	TGATCA	2 cut(s)	300, 1243
Kzo9I	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
LweI	GCATC	2 cut(s)	130, 559
MaeI	CTAG	6 cut(s)	78, 495, 591, 828, 1263, 1325
MaeIII	GTNAC	1 cut(s)	254
MalI	GATC	9 cut(s)	54, 135, 302, 351, 642, 820, 924, 1245, 1287
MboI	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
MboII	GAAGA	9 cut(s)	118, 254, 261, 319, 343, 427, 454, 593, 1074
MfeI	CAATTG	1 cut(s)	59
MflI	RGATCY	2 cut(s)	133, 818
MhlI	GDGCHC	3 cut(s)	364, 1022, 1148
MluCI	AATT	7 cut(s)	59, 667, 844, 856, 1214, 1228, 1293
MlyI	GAGTC	1 cut(s)	1375
MnlI	CCTC	5 cut(s)	139, 245, 877, 1084, 1096
MroXI	GAANNNNTTC	2 cut(s)	188, 392
MseI	TTAA	4 cut(s)	666, 942, 1125, 1178
MslI	CAYNNNNRTG	1 cut(s)	173
MspA1I	CMGCKG	4 cut(s)	605, 614, 779, 1352
MspI	CCGG	3 cut(s)	9, 378, 400
MspR9I	CCNGG	2 cut(s)	123, 532
MunI	CAATTG	1 cut(s)	59
Mva1269I	GAATGC	1 cut(s)	1240
MvaI	CCWGG	2 cut(s)	123, 532
MwoI	GCNNNNNNNGC	8 cut(s)	204, 611, 614, 742, 973, 1107, 1312, 1321
NcoI	CCATGG	2 cut(s)	39, 266
NdeII	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
NheI	GCTAGC	1 cut(s)	1324
NlaIII	CATG	6 cut(s)	43, 270, 664, 775, 982, 1322
NlaIV	GGNNCC	2 cut(s)	227, 865
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	1 cut(s)	254
NspV	TTCGAA	2 cut(s)	440, 1232
PctI	GAATGC	1 cut(s)	1240
PdmI	GAANNNNTTC	2 cut(s)	188, 392
PfeI	GAWTC	6 cut(s)	115, 189, 381, 739, 889, 1162
PflMI	CCANNNNNTGG	1 cut(s)	1376
PfoI	TCCNGGA	1 cut(s)	530
PleI	GAGTC	1 cut(s)	1374
PpsI	GAGTC	1 cut(s)	1374
PshAI	GACNNNNGTC	1 cut(s)	338
PshBI	ATTAAT	1 cut(s)	666
PsiI	TTATAA	1 cut(s)	956
Psp124BI	GAGCTC	1 cut(s)	364
Psp6I	CCWGG	2 cut(s)	121, 530
PspFI	CCCAGC	2 cut(s)	67, 716
PspGI	CCWGG	2 cut(s)	121, 530
PspN4I	GGNNCC	2 cut(s)	227, 865
PspPI	GGNCC	2 cut(s)	226, 1009
PstI	CTGCAG	2 cut(s)	610, 1002
PstNI	CAGNNNCTG	1 cut(s)	614
PsuI	RGATCY	2 cut(s)	133, 818
PvuII	CAGCTG	4 cut(s)	605, 614, 779, 1352
RseI	CAYNNNNRTG	1 cut(s)	173
SacI	GAGCTC	1 cut(s)	364
SaqAI	TTAA	4 cut(s)	666, 942, 1125, 1178
Sau3AI	GATC	9 cut(s)	52, 133, 300, 349, 640, 818, 922, 1243, 1285
Sau96I	GGNCC	2 cut(s)	226, 1009
SchI	GAGTC	1 cut(s)	1375
ScrFI	CCNGG	2 cut(s)	123, 532
SduI	GDGCHC	3 cut(s)	364, 1022, 1148
SfaNI	GCATC	2 cut(s)	130, 559
SfcI	CTRYAG	3 cut(s)	606, 645, 998
SfuI	TTCGAA	2 cut(s)	440, 1232
SinI	GGWCC	1 cut(s)	226
SmiMI	CAYNNNNRTG	1 cut(s)	173
SmlI	CTYRAG	1 cut(s)	672
SmoI	CTYRAG	1 cut(s)	672
SpeI	ACTAGT	1 cut(s)	827
Sse9I	AATT	7 cut(s)	59, 667, 844, 856, 1214, 1228, 1293
SsiI	CCGC	7 cut(s)	112, 489, 965, 984, 1007, 1032, 1043
SspI	AATATT	1 cut(s)	940
SspMI	CTAG	6 cut(s)	78, 495, 591, 828, 1263, 1325
SstI	GAGCTC	1 cut(s)	364
StyD4I	CCNGG	2 cut(s)	121, 530
StyI	CCWWGG	2 cut(s)	39, 266
TaaI	ACNGT	2 cut(s)	515, 649
TasI	AATT	7 cut(s)	59, 667, 844, 856, 1214, 1228, 1293
TauI	GCSGC	3 cut(s)	967, 1010, 1035
TfiI	GAWTC	6 cut(s)	115, 189, 381, 739, 889, 1162
Tru1I	TTAA	4 cut(s)	666, 942, 1125, 1178
Tru9I	TTAA	4 cut(s)	666, 942, 1125, 1178
TscAI	CASTG	1 cut(s)	1381
TseFI	GTSAC	1 cut(s)	254
Tsp45I	GTSAC	1 cut(s)	254
TspDTI	ATGAA	8 cut(s)	181, 233, 535, 816, 1146, 1176, 1226, 1286
TspRI	CASTG	1 cut(s)	1381
Van91I	CCANNNNNTGG	1 cut(s)	1376
VpaK11BI	GGWCC	1 cut(s)	226
VspI	ATTAAT	1 cut(s)	666
XapI	RAATTY	4 cut(s)	844, 1214, 1228, 1293
XcmI	CCANNNNNNNNNTGG	1 cut(s)	172
XmiI	GTMKAC	1 cut(s)	315
XmnI	GAANNNNTTC	2 cut(s)	188, 392
XspI	CTAG	6 cut(s)	78, 495, 591, 828, 1263, 1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.