Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0009156

Physical Location & Seq

Genomic Coordinates Reverse (-)

15092721 .. 15095110

Gene Structure 2390 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0177600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGAGGGAAACAGTCAAGAGATGAGTGCTGATGAATATTTTCGCTCTCTTCCACCTGGTTATCGATTCAACCCTACTGATGGAGAGTTGATTCTAAATTATTTGAACCGAAGGATCTTGAATCAGCCACTTCCCCGTAACAGGATCCATGACATAAATATTTACCAATACCATCCCCAAGAGCTTTCAAAGATGTTCGACATAATTAGAGAAGATGGCTGGTATTTTTTCAGTAAAAGGGACCGAAAGTATCTAAATGGGACTCGGCCAAATCGTGCAGCTCGTGGTGGACGTTGGAAGGCAACTGGAAGTGAAGTAAATATCATTGACGAAAATGGTGAACTAATTGGACACAAAAAAGTTCTCGAATTTAAAAAAGGGAGACATAAACAAGATATAAAGACGGAATGGAAAATGCATGAATATAGAATTAAGGATGAGAAGGAAGACATTCCTCGTCCAAAGAGGAAAAAAGGTGAAGGAAATATGAAGTTGGATACTGTTTTGTGCAAAATCTATTTAAATACCAGAGCCAATGGTAATACGGATGAGAAAGATGCAGTCACTACAGAAACGTCTGATCAAGGAATTATGGTTACAGATGCTGGTACATCTCATGACAATGATATATCAGTACTTAAGCAGGGAGTTGGTCAAGTTCAACCTCTTGATTCATTATTAATGATGAGCAGCATGCAACCACAGGTCCATAATAATACTACCGGAGGATTCAACAATGTGGATCGCATATCCAATTCTTCCACAATACCCGATTGTTTTTATTCGTCGACTTCGATGAGTAACGGAATTATGGTTACAGACACTGTTACATCTCATGACAAAGATATATCAGTACTTGAGCACGGACCTGGTCAACTTCAACCTCTTGGTTCCTCACTAATGTGCAGCCTGCAACCACAGGTCCATACTACCGGAGGATTCAAGAATATGGATCACATATCCAATTCTTCCACAGTACCCAACATTTGTTTTTATTCATCAAATTCGATGAACGGAATTATGGTTACAGATACTGTTACATTTCATGATAAAGATATATCAGTACTTAAGCAGGGAGCTGGTCAAGTTCAACCCCTTGATTCCTCACTGATGTGCAGCAGCCTGCAACCGCAGGTCCATAATAATACTACCGGAGGATTCAACAATATGTATCACATATCCAATTCTTCCACAATACCCGACAATTGTTTTTATTCGTCAACTCCAATGAGCAACGGAGTATGTGACTCCACACAGTGTACACATCATGGTGGGTCTATGACAAATGGAGCTTCTGGCTCCGGGTATCGGTGGGGGTCCTTCACCCAGCTCCATCATCAAAACTATAAGAATTACAGCATGTCCTCGGAGCAGATGCCCTCATCTTCGACGTGGTATCCTTCTGAGCATCCCTTGCAATATCCAACAGAGATTTGGACACAATCGGAGCCTGAAAATCATGAGATGCCTCAGGTGGATGATCCAACTTCAGTATCGTTACCTGCCCGATACATAGAATATGAGTCTGTGCTTGTCAACAAGGAAGAAGCTGATATCATGCCTGTTCAGCATGCCAATAAGGACGAAGCTGATGATGATGGATTACAGTTTCTTAGCATTCCAGATGAAGTTCATGAAAATGATTCCAAATTGGCGTCATTTGATGACGAAATTAACAGTGGGCTTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006271 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0022616 GO:0030894 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0033554 GO:0034641 GO:0034645 GO:0042575 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0043625 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0061695 GO:0070013 GO:0071704 GO:0090304 GO:1901360 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 ko03410 ko03420 ko03430 ko03440 ko05166 map00230 map00240 map01100 map03030 map03410 map03420 map03430 map03440 map05166

Pfam Domains

Protein Families

DNA_pol_E_B

Protein Analysis

563

Amino Acids

63.23

Weight (kDa)

5.28

Isoelectric Point (pI)

46.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	18 - 144	2.4e-38	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42120 AT2G42120
fragaria_vesca	FvH4_6g22330 FvH4_6g22330
malus_domestica	MD12G1057200.v1.1 MD14G1057800.v1.1
prunus_persica	Prupe.7G076900_v2.0.a1 Prupe.7G076900_v2.0.a1 Prupe.7G076900_v2.0.a1
pyrus_communis	pycom14g04690
rosa_chinensis	RchiOBHm_Chr3g0479691
rosa_multiflora	Rmu_sc0003755.1_g000006 Rmu_sc0031395.1_g000006
rosa_roxburghii	Rroxscaffold_6G00402060
rosa_rugosa	Rorug03G0177400 Rorug03G0177500 Rorug03G0177600
rosa_samantha	Rh3AG228200 Rh3BG261400 Rh3CG258500 Rh3DG254700
rosa_wichuraiana	Rw3G020420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1123, 1510
AccI	GTMKAC	1 cut(s)	788
AciI	CCGC	1 cut(s)	1130
AclWI	GGATC	6 cut(s)	122, 139, 152, 750, 960, 1475
AcoI	YGGCCR	1 cut(s)	266
AcsI	RAATTY	2 cut(s)	368, 1003
AcuI	CTGAAG	1 cut(s)	1473
AcyI	GRCGYC	1 cut(s)	1655
AdeI	CACNNNGTG	1 cut(s)	1257
AfaI	GTAC	6 cut(s)	610, 636, 855, 978, 1065, 1261
AfiI	CCNNNNNNNGG	3 cut(s)	80, 141, 1308
AflII	CTTAAG	2 cut(s)	638, 1067
AjiI	CACGTC	1 cut(s)	1392
AjnI	CCWGG	2 cut(s)	55, 868
AleI	CACNNNNGTG	2 cut(s)	901, 1111
AluBI	AGCT	7 cut(s)	184, 281, 1079, 1292, 1330, 1550, 1589
AluI	AGCT	7 cut(s)	184, 281, 1079, 1292, 1330, 1550, 1589
Alw21I	GWGCWC	1 cut(s)	864
Alw26I	GTCTC	1 cut(s)	376
AlwI	GGATC	6 cut(s)	122, 139, 152, 750, 960, 1475
AlwNI	CAGNNNCTG	3 cut(s)	605, 824, 1034
AoxI	GGCC	1 cut(s)	266
ApeKI	GCWGC	5 cut(s)	278, 690, 906, 1116, 1119
ApoI	RAATTY	2 cut(s)	368, 1003
AseI	ATTAAT	1 cut(s)	680
Asp700I	GAANNNNTTC	2 cut(s)	39, 450
AspS9I	GGNCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
AsuC2I	CCSGG	1 cut(s)	1303
AsuHPI	GGTGA	3 cut(s)	350, 488, 1315
AvaII	GGWCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
AxyI	CCTNAGG	1 cut(s)	1470
BaeI	ACNNNNGTAYC	2 cut(s)	1476, 1509
BamHI	GGATCC	1 cut(s)	144
BauI	CACGAG	1 cut(s)	282
BbsI	GAAGAC	1 cut(s)	453
Bbv12I	GWGCWC	1 cut(s)	864
BbvI	GCAGC	5 cut(s)	290, 702, 918, 1128, 1131
BccI	CCATC	5 cut(s)	74, 180, 209, 1341, 1592
BciT130I	CCWGG	2 cut(s)	57, 870
BciVI	GTATCC	2 cut(s)	490, 1407
BclI	TGATCA	1 cut(s)	580
BcnI	CCSGG	1 cut(s)	1303
BcoDI	GTCTC	1 cut(s)	376
BfmI	CTRYAG	1 cut(s)	567
BfrI	CTTAAG	2 cut(s)	638, 1067
BfuAI	ACCTGC	2 cut(s)	1123, 1510
BfuI	GTATCC	2 cut(s)	490, 1407
BisI	GCNGC	5 cut(s)	279, 691, 907, 1117, 1120
BlsI	GCNGC	5 cut(s)	280, 692, 908, 1118, 1121
BmcAI	AGTACT	3 cut(s)	636, 855, 1065
Bme1390I	CCNGG	3 cut(s)	57, 870, 1303
Bme18I	GGWCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
BmgBI	CACGTC	1 cut(s)	1392
BmgT120I	GGNCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
BmiI	GGNNCC	6 cut(s)	146, 242, 892, 1300, 1318, 1449
BmrFI	CCNGG	3 cut(s)	57, 870, 1303
BmsI	GCATC	5 cut(s)	547, 592, 1365, 1417, 1455
BpiI	GAAGAC	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	878
BpuMI	CCSGG	1 cut(s)	1303
Bsa29I	ATCGAT	1 cut(s)	64
BsaHI	GRCGYC	1 cut(s)	1655
BsaJI	CCNNGG	1 cut(s)	1365
BsaWI	WCCGGW	3 cut(s)	722, 932, 1151
Bsc4I	CCNNNNNNNGG	3 cut(s)	80, 141, 1308
Bse1I	ACTGG	1 cut(s)	310
Bse21I	CCTNAGG	1 cut(s)	1470
BseBI	CCWGG	2 cut(s)	57, 870
BseCI	ATCGAT	1 cut(s)	64
BseDI	CCNNGG	1 cut(s)	1365
BseGI	GGATG	5 cut(s)	172, 442, 553, 1408, 1483
BseLI	CCNNNNNNNGG	3 cut(s)	80, 141, 1308
BseMII	CTCAG	2 cut(s)	1395, 1484
BseNI	ACTGG	1 cut(s)	310
BseXI	GCAGC	5 cut(s)	290, 702, 918, 1128, 1131
BseYI	CCCAGC	1 cut(s)	1326
BsgI	GTGCAG	3 cut(s)	297, 925, 1135
BshFI	GGCC	1 cut(s)	268
BshVI	ATCGAT	1 cut(s)	64
BsiHKAI	GWGCWC	1 cut(s)	864
BsiSI	CCGG	4 cut(s)	723, 933, 1152, 1302
BslFI	GGGAC	2 cut(s)	254, 274
BslI	CCNNNNNNNGG	3 cut(s)	80, 141, 1308
BsmAI	GTCTC	1 cut(s)	376
BsmFI	GGGAC	2 cut(s)	254, 274
BsmI	GAATGC	1 cut(s)	1617
BsnI	GGCC	1 cut(s)	268
Bsp1286I	GDGCHC	1 cut(s)	864
Bsp1407I	TGTACA	1 cut(s)	1259
Bsp143I	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
BspACI	CCGC	1 cut(s)	1130
BspANI	GGCC	1 cut(s)	268
BspCNI	CTCAG	2 cut(s)	1396, 1483
BspDI	ATCGAT	1 cut(s)	64
BspHI	TCATGA	5 cut(s)	616, 835, 1045, 1459, 1633
BspLI	GGNNCC	6 cut(s)	146, 242, 892, 1300, 1318, 1449
BspMI	ACCTGC	2 cut(s)	1123, 1510
BspPI	GGATC	6 cut(s)	122, 139, 152, 750, 960, 1475
BspTI	CTTAAG	2 cut(s)	638, 1067
BsrGI	TGTACA	1 cut(s)	1259
BsrI	ACTGG	1 cut(s)	310
BssECI	CCNNGG	1 cut(s)	1365
BssMI	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
BssNI	GRCGYC	1 cut(s)	1655
BssSI	CACGAG	1 cut(s)	282
Bst2BI	CACGAG	1 cut(s)	282
Bst2UI	CCWGG	2 cut(s)	57, 870
Bst4CI	ACNGT	8 cut(s)	14, 502, 826, 976, 1036, 1257, 1608, 1679
Bst6I	CTCTTC	1 cut(s)	54
BstACI	GRCGYC	1 cut(s)	1655
BstAFI	CTTAAG	2 cut(s)	638, 1067
BstAPI	GCANNNNNTGC	1 cut(s)	1414
BstAUI	TGTACA	1 cut(s)	1259
BstC8I	GCNNGC	4 cut(s)	695, 911, 1124, 1572
BstDEI	CTNAG	3 cut(s)	1404, 1470, 1613
BstF5I	GGATG	5 cut(s)	172, 442, 553, 1408, 1483
BstKTI	GATC	6 cut(s)	117, 147, 583, 745, 955, 1483
BstMAI	GTCTC	1 cut(s)	376
BstMBI	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
BstMWI	GCNNNNNNNGC	2 cut(s)	1414, 1567
BstNI	CCWGG	2 cut(s)	57, 870
BstNSI	RCATGY	3 cut(s)	697, 1363, 1574
BstSCI	CCNGG	3 cut(s)	55, 868, 1301
BstSFI	CTRYAG	1 cut(s)	567
BstV1I	GCAGC	5 cut(s)	290, 702, 918, 1128, 1131
BstV2I	GAAGAC	1 cut(s)	453
BstX2I	RGATCY	2 cut(s)	114, 144
BstYI	RGATCY	2 cut(s)	114, 144
Bsu15I	ATCGAT	1 cut(s)	64
Bsu36I	CCTNAGG	1 cut(s)	1470
BsuI	GTATCC	2 cut(s)	490, 1407
BsuRI	GGCC	1 cut(s)	268
BsuTUI	ATCGAT	1 cut(s)	64
BtrI	CACGTC	1 cut(s)	1392
BtsCI	GGATG	5 cut(s)	172, 442, 553, 1408, 1483
BtsIMutI	CAGTG	4 cut(s)	822, 1106, 1262, 1684
BveI	ACCTGC	2 cut(s)	1123, 1510
Cac8I	GCNNGC	4 cut(s)	695, 911, 1124, 1572
CaiI	CAGNNNCTG	3 cut(s)	605, 824, 1034
CciI	TCATGA	5 cut(s)	616, 835, 1045, 1459, 1633
Cfr13I	GGNCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
ClaI	ATCGAT	1 cut(s)	64
CseI	GACGC	1 cut(s)	1644
CsiI	ACCWGGT	2 cut(s)	55, 868
Csp6I	GTAC	6 cut(s)	609, 635, 854, 977, 1064, 1260
CviQI	GTAC	6 cut(s)	609, 635, 854, 977, 1064, 1260
DdeI	CTNAG	3 cut(s)	1404, 1470, 1613
DpnI	GATC	6 cut(s)	116, 146, 582, 744, 954, 1482
DpnII	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
DraI	TTTAAA	2 cut(s)	373, 522
DraIII	CACNNNGTG	1 cut(s)	1257
EaeI	YGGCCR	1 cut(s)	266
Eam1104I	CTCTTC	1 cut(s)	54
EarI	CTCTTC	1 cut(s)	54
Eco32I	GATATC	1 cut(s)	1555
Eco47I	GGWCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
Eco57I	CTGAAG	1 cut(s)	1473
Eco81I	CCTNAGG	1 cut(s)	1470
EcoO109I	RGGNCCY	1 cut(s)	1317
EcoRII	CCWGG	2 cut(s)	55, 868
EcoRV	GATATC	1 cut(s)	1555
EcoT22I	ATGCAT	1 cut(s)	420
FaqI	GGGAC	2 cut(s)	254, 274
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	788
Fnu4HI	GCNGC	5 cut(s)	279, 691, 907, 1117, 1120
FokI	GGATG	5 cut(s)	159, 449, 560, 1395, 1490
Fsp4HI	GCNGC	5 cut(s)	279, 691, 907, 1117, 1120
GluI	GCNGC	5 cut(s)	279, 691, 907, 1117, 1120
GsaI	CCCAGC	1 cut(s)	1330
HaeIII	GGCC	1 cut(s)	268
HapII	CCGG	4 cut(s)	723, 933, 1152, 1302
HgaI	GACGC	1 cut(s)	1644
Hin1I	GRCGYC	1 cut(s)	1655
HincII	GTYRAC	4 cut(s)	789, 875, 1221, 1537
HindII	GTYRAC	4 cut(s)	789, 875, 1221, 1537
HpaII	CCGG	4 cut(s)	723, 933, 1152, 1302
HphI	GGTGA	3 cut(s)	350, 488, 1315
Hpy166II	GTNNAC	8 cut(s)	290, 341, 789, 875, 1221, 1260, 1262, 1537
Hpy188I	TCNGA	4 cut(s)	580, 1369, 1405, 1447
Hpy8I	GTNNAC	8 cut(s)	290, 341, 789, 875, 1221, 1260, 1262, 1537
Hpy99I	CGWCG	2 cut(s)	790, 1393
HpyAV	CCTTC	6 cut(s)	105, 292, 436, 473, 1330, 1410
HpyCH4III	ACNGT	8 cut(s)	14, 502, 826, 976, 1036, 1257, 1608, 1679
HpyCH4IV	ACGT	3 cut(s)	292, 575, 1391
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1414, 1567
HpyF3I	CTNAG	3 cut(s)	1404, 1470, 1613
HpySE526I	ACGT	3 cut(s)	292, 575, 1391
Hsp92I	GRCGYC	1 cut(s)	1655
Ksp22I	TGATCA	1 cut(s)	580
Kzo9I	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
LmnI	GCTCC	6 cut(s)	1076, 1289, 1304, 1335, 1369, 1447
Lsp1109I	GCAGC	5 cut(s)	290, 702, 918, 1128, 1131
LweI	GCATC	5 cut(s)	547, 592, 1365, 1417, 1455
MabI	ACCWGGT	2 cut(s)	55, 868
MaeII	ACGT	3 cut(s)	292, 575, 1391
MalI	GATC	6 cut(s)	116, 146, 582, 744, 954, 1482
MboI	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
MboII	GAAGA	8 cut(s)	41, 224, 458, 750, 960, 1179, 1377, 1556
MfeI	CAATTG	1 cut(s)	1204
MflI	RGATCY	2 cut(s)	114, 144
MhlI	GDGCHC	1 cut(s)	864
MlyI	GAGTC	3 cut(s)	256, 1241, 1532
MmeI	TCCRAC	4 cut(s)	275, 474, 1448, 1508
Mph1103I	ATGCAT	1 cut(s)	420
MroXI	GAANNNNTTC	2 cut(s)	39, 450
MseI	TTAA	7 cut(s)	372, 432, 521, 639, 680, 1068, 1674
MslI	CAYNNNNRTG	5 cut(s)	621, 901, 1111, 1269, 1638
MspCI	CTTAAG	2 cut(s)	638, 1067
MspI	CCGG	4 cut(s)	723, 933, 1152, 1302
MspR9I	CCNGG	3 cut(s)	57, 870, 1303
MunI	CAATTG	1 cut(s)	1204
Mva1269I	GAATGC	1 cut(s)	1617
MvaI	CCWGG	2 cut(s)	57, 870
MwoI	GCNNNNNNNGC	2 cut(s)	1414, 1567
NciI	CCSGG	1 cut(s)	1303
NdeII	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
NlaIV	GGNNCC	6 cut(s)	146, 242, 892, 1300, 1318, 1449
NmeAIII	GCCGAG	1 cut(s)	244
NmuCI	GTSAC	2 cut(s)	562, 1244
NsiI	ATGCAT	1 cut(s)	420
NspI	RCATGY	3 cut(s)	697, 1363, 1574
OliI	CACNNNNGTG	2 cut(s)	901, 1111
PaeI	GCATGC	2 cut(s)	697, 1574
PagI	TCATGA	5 cut(s)	616, 835, 1045, 1459, 1633
PcsI	WCGNNNNNNNCGW	4 cut(s)	271, 280, 289, 791
PctI	GAATGC	1 cut(s)	1617
PdmI	GAANNNNTTC	2 cut(s)	39, 450
PfeI	GAWTC	9 cut(s)	66, 91, 121, 671, 729, 939, 1100, 1158, 1643
PflFI	GACNNNGTC	1 cut(s)	870
PkrI	GCNGC	5 cut(s)	280, 692, 908, 1118, 1121
PleI	GAGTC	3 cut(s)	256, 1241, 1531
PpsI	GAGTC	3 cut(s)	256, 1241, 1531
PpuMI	RGGWCCY	1 cut(s)	1317
PshBI	ATTAAT	1 cut(s)	680
Psp5II	RGGWCCY	1 cut(s)	1317
Psp6I	CCWGG	2 cut(s)	55, 868
PspFI	CCCAGC	1 cut(s)	1326
PspGI	CCWGG	2 cut(s)	55, 868
PspN4I	GGNNCC	6 cut(s)	146, 242, 892, 1300, 1318, 1449
PspPI	GGNCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
PspPPI	RGGWCCY	1 cut(s)	1317
PstNI	CAGNNNCTG	3 cut(s)	605, 824, 1034
PsuI	RGATCY	2 cut(s)	114, 144
PsyI	GACNNNGTC	1 cut(s)	870
RsaI	GTAC	6 cut(s)	610, 636, 855, 978, 1065, 1261
RsaNI	GTAC	6 cut(s)	609, 635, 854, 977, 1064, 1260
RseI	CAYNNNNRTG	5 cut(s)	621, 901, 1111, 1269, 1638
SalI	GTCGAC	1 cut(s)	787
SaqAI	TTAA	7 cut(s)	372, 432, 521, 639, 680, 1068, 1674
SatI	GCNGC	5 cut(s)	279, 691, 907, 1117, 1120
Sau3AI	GATC	6 cut(s)	114, 144, 580, 742, 952, 1480
Sau96I	GGNCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
ScaI	AGTACT	3 cut(s)	636, 855, 1065
SchI	GAGTC	3 cut(s)	256, 1241, 1532
ScrFI	CCNGG	3 cut(s)	57, 870, 1303
SduI	GDGCHC	1 cut(s)	864
SexAI	ACCWGGT	2 cut(s)	55, 868
SfaNI	GCATC	5 cut(s)	547, 592, 1365, 1417, 1455
SfcI	CTRYAG	1 cut(s)	567
SinI	GGWCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
SmiI	ATTTAAAT	1 cut(s)	522
SmiMI	CAYNNNNRTG	5 cut(s)	621, 901, 1111, 1269, 1638
SmlI	CTYRAG	3 cut(s)	638, 857, 1067
SmoI	CTYRAG	3 cut(s)	638, 857, 1067
SphI	GCATGC	2 cut(s)	697, 1574
SsiI	CCGC	1 cut(s)	1130
SspI	AATATT	2 cut(s)	38, 160
StyD4I	CCNGG	3 cut(s)	55, 868, 1301
SwaI	ATTTAAAT	1 cut(s)	522
TaaI	ACNGT	8 cut(s)	14, 502, 826, 976, 1036, 1257, 1608, 1679
TaiI	ACGT	3 cut(s)	295, 578, 1394
TaqI	TCGA	7 cut(s)	64, 198, 366, 788, 794, 1007, 1388
TaqII	GACCGA	1 cut(s)	258
TatI	WGTACW	4 cut(s)	634, 853, 1063, 1259
TfiI	GAWTC	9 cut(s)	66, 91, 121, 671, 729, 939, 1100, 1158, 1643
Tru1I	TTAA	7 cut(s)	372, 432, 521, 639, 680, 1068, 1674
Tru9I	TTAA	7 cut(s)	372, 432, 521, 639, 680, 1068, 1674
TscAI	CASTG	4 cut(s)	829, 1113, 1262, 1684
TseFI	GTSAC	2 cut(s)	562, 1244
TseI	GCWGC	5 cut(s)	278, 690, 906, 1116, 1119
Tsp45I	GTSAC	2 cut(s)	562, 1244
TspGWI	ACGGA	6 cut(s)	419, 560, 819, 879, 1029, 1251
TspRI	CASTG	4 cut(s)	829, 1113, 1262, 1684
Tth111I	GACNNNGTC	1 cut(s)	870
Vha464I	CTTAAG	2 cut(s)	638, 1067
VpaK11BI	GGWCC	6 cut(s)	241, 706, 866, 922, 1135, 1317
VspI	ATTAAT	1 cut(s)	680
XapI	RAATTY	2 cut(s)	368, 1003
XceI	RCATGY	3 cut(s)	697, 1363, 1574
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1431
XmiI	GTMKAC	1 cut(s)	788
XmnI	GAANNNNTTC	2 cut(s)	39, 450
ZrmI	AGTACT	3 cut(s)	636, 855, 1065
Zsp2I	ATGCAT	1 cut(s)	420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.