Belongs to the FPP GGPP synthase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1264500.v1.1 MD17G1260500.v1.1 |
| prunus_persica | Prupe.3G162100_v2.0.a1 |
| pyrus_communis | pycom09g17810 pycom17g26120 |
| rosa_chinensis | RchiOBHm_Chr3g0493061 |
| rosa_laevigata | RLG00000022731 |
| rosa_multiflora | Rmu_sc0003941.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00391880 |
| rosa_rugosa | Rorug03G0258800 |
| rosa_samantha | Rh3AG307900 Rh3BG343300 Rh3CG340700 Rh3DG343100 |
| rosa_wichuraiana | Rw3G027080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 165 |
| AccII | CGCG | 1 cut(s) | 140 |
| AciI | CCGC | 2 cut(s) | 143, 165 |
| AcyI | GRCGYC | 1 cut(s) | 153 |
| AfaI | GTAC | 1 cut(s) | 86 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 74 |
| AjnI | CCWGG | 1 cut(s) | 47 |
| AluBI | AGCT | 1 cut(s) | 185 |
| AluI | AGCT | 1 cut(s) | 185 |
| AoxI | GGCC | 1 cut(s) | 192 |
| ApeKI | GCWGC | 3 cut(s) | 44, 182, 198 |
| AspLEI | GCGC | 3 cut(s) | 142, 173, 203 |
| AsuHPI | GGTGA | 1 cut(s) | 122 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 18, 51 |
| BbvI | GCAGC | 3 cut(s) | 56, 194, 210 |
| BciT130I | CCWGG | 1 cut(s) | 49 |
| BciVI | GTATCC | 1 cut(s) | 19 |
| BfaI | CTAG | 1 cut(s) | 186 |
| BfoI | RGCGCY | 1 cut(s) | 204 |
| BfuI | GTATCC | 1 cut(s) | 19 |
| BisI | GCNGC | 4 cut(s) | 45, 143, 183, 199 |
| BlsI | GCNGC | 4 cut(s) | 46, 144, 184, 200 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BpuEI | CTTGAG | 1 cut(s) | 102 |
| BsaHI | GRCGYC | 1 cut(s) | 153 |
| BsaWI | WCCGGW | 1 cut(s) | 74 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 74 |
| BseBI | CCWGG | 1 cut(s) | 49 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 74 |
| BseRI | GAGGAG | 2 cut(s) | 100, 103 |
| BseXI | GCAGC | 3 cut(s) | 56, 194, 210 |
| Bsh1236I | CGCG | 1 cut(s) | 140 |
| BshFI | GGCC | 1 cut(s) | 194 |
| BsiSI | CCGG | 1 cut(s) | 75 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 74 |
| BsnI | GGCC | 1 cut(s) | 194 |
| Bsp143I | GATC | 1 cut(s) | 124 |
| BspACI | CCGC | 2 cut(s) | 143, 165 |
| BspANI | GGCC | 1 cut(s) | 194 |
| BspFNI | CGCG | 1 cut(s) | 140 |
| BsrBI | CCGCTC | 1 cut(s) | 165 |
| BssMI | GATC | 1 cut(s) | 124 |
| BssNI | GRCGYC | 1 cut(s) | 153 |
| Bst2UI | CCWGG | 1 cut(s) | 49 |
| Bst6I | CTCTTC | 1 cut(s) | 106 |
| BstACI | GRCGYC | 1 cut(s) | 153 |
| BstC8I | GCNNGC | 1 cut(s) | 196 |
| BstFNI | CGCG | 1 cut(s) | 140 |
| BstH2I | RGCGCY | 1 cut(s) | 204 |
| BstHHI | GCGC | 3 cut(s) | 142, 173, 203 |
| BstKTI | GATC | 1 cut(s) | 127 |
| BstMBI | GATC | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 179, 191, 200 |
| BstNI | CCWGG | 1 cut(s) | 49 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BstUI | CGCG | 1 cut(s) | 140 |
| BstV1I | GCAGC | 3 cut(s) | 56, 194, 210 |
| BsuI | GTATCC | 1 cut(s) | 19 |
| BsuRI | GGCC | 1 cut(s) | 194 |
| BtsI | GCAGTG | 1 cut(s) | 61 |
| BtsIMutI | CAGTG | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 1 cut(s) | 196 |
| CfoI | GCGC | 3 cut(s) | 142, 173, 203 |
| CseI | GACGC | 1 cut(s) | 161 |
| Csp6I | GTAC | 1 cut(s) | 85 |
| CviAII | CATG | 1 cut(s) | 157 |
| CviJI | RGCY | 3 cut(s) | 47, 185, 194 |
| CviKI_1 | RGCY | 3 cut(s) | 47, 185, 194 |
| CviQI | GTAC | 1 cut(s) | 85 |
| DpnI | GATC | 1 cut(s) | 126 |
| DpnII | GATC | 1 cut(s) | 124 |
| Eam1104I | CTCTTC | 1 cut(s) | 106 |
| EarI | CTCTTC | 1 cut(s) | 106 |
| EcoRII | CCWGG | 1 cut(s) | 47 |
| FaeI | CATG | 1 cut(s) | 160 |
| FaiI | YATR | 3 cut(s) | 158, 221, 223 |
| FatI | CATG | 1 cut(s) | 156 |
| Fnu4HI | GCNGC | 4 cut(s) | 45, 143, 183, 199 |
| Fsp4HI | GCNGC | 4 cut(s) | 45, 143, 183, 199 |
| FspBI | CTAG | 1 cut(s) | 186 |
| GlaI | GCGC | 3 cut(s) | 141, 172, 202 |
| GluI | GCNGC | 4 cut(s) | 45, 143, 183, 199 |
| HaeII | RGCGCY | 1 cut(s) | 204 |
| HaeIII | GGCC | 1 cut(s) | 194 |
| HapII | CCGG | 1 cut(s) | 75 |
| HgaI | GACGC | 1 cut(s) | 161 |
| HhaI | GCGC | 3 cut(s) | 142, 173, 203 |
| Hin1I | GRCGYC | 1 cut(s) | 153 |
| Hin1II | CATG | 1 cut(s) | 160 |
| Hin6I | GCGC | 3 cut(s) | 140, 171, 201 |
| HinP1I | GCGC | 3 cut(s) | 140, 171, 201 |
| HpaII | CCGG | 1 cut(s) | 75 |
| HphI | GGTGA | 1 cut(s) | 122 |
| Hpy188I | TCNGA | 1 cut(s) | 38 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| Hpy99I | CGWCG | 1 cut(s) | 155 |
| HpyCH4IV | ACGT | 2 cut(s) | 79, 225 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 179, 191, 200 |
| HpySE526I | ACGT | 2 cut(s) | 79, 225 |
| Hsp92I | GRCGYC | 1 cut(s) | 153 |
| Hsp92II | CATG | 1 cut(s) | 160 |
| HspAI | GCGC | 3 cut(s) | 140, 171, 201 |
| Kzo9I | GATC | 1 cut(s) | 124 |
| LpnPI | CCDG | 5 cut(s) | 15, 34, 61, 88, 208 |
| Lsp1109I | GCAGC | 3 cut(s) | 56, 194, 210 |
| MaeI | CTAG | 1 cut(s) | 186 |
| MaeII | ACGT | 2 cut(s) | 79, 225 |
| MalI | GATC | 1 cut(s) | 126 |
| MbiI | CCGCTC | 1 cut(s) | 165 |
| MboI | GATC | 1 cut(s) | 124 |
| MboII | GAAGA | 1 cut(s) | 93 |
| MluCI | AATT | 1 cut(s) | 17 |
| MmeI | TCCRAC | 1 cut(s) | 129 |
| MnlI | CCTC | 5 cut(s) | 105, 109, 121, 124, 184 |
| MspI | CCGG | 1 cut(s) | 75 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| MvaI | CCWGG | 1 cut(s) | 49 |
| MvnI | CGCG | 1 cut(s) | 140 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 179, 191, 200 |
| NdeII | GATC | 1 cut(s) | 124 |
| NlaIII | CATG | 1 cut(s) | 160 |
| PkrI | GCNGC | 4 cut(s) | 46, 144, 184, 200 |
| Psp6I | CCWGG | 1 cut(s) | 47 |
| PspGI | CCWGG | 1 cut(s) | 47 |
| RsaI | GTAC | 1 cut(s) | 86 |
| RsaNI | GTAC | 1 cut(s) | 85 |
| SatI | GCNGC | 4 cut(s) | 45, 143, 183, 199 |
| Sau3AI | GATC | 1 cut(s) | 124 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SetI | ASST | 4 cut(s) | 53, 82, 187, 228 |
| SmlI | CTYRAG | 1 cut(s) | 117 |
| SmoI | CTYRAG | 1 cut(s) | 117 |
| Sse9I | AATT | 1 cut(s) | 17 |
| SsiI | CCGC | 2 cut(s) | 143, 165 |
| SspMI | CTAG | 1 cut(s) | 186 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TaiI | ACGT | 2 cut(s) | 82, 228 |
| TaqI | TCGA | 1 cut(s) | 150 |
| TasI | AATT | 1 cut(s) | 17 |
| TatI | WGTACW | 1 cut(s) | 84 |
| TauI | GCSGC | 1 cut(s) | 145 |
| TscAI | CASTG | 1 cut(s) | 68 |
| TseI | GCWGC | 3 cut(s) | 44, 182, 198 |
| TspDTI | ATGAA | 2 cut(s) | 44, 208 |
| TspRI | CASTG | 1 cut(s) | 68 |
| XspI | CTAG | 1 cut(s) | 186 |