Rorug03G0346600

Glycine-rich cell wall structural

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0017641
Physical Location & Seq
Forward (+)
42045550 .. 42047453
1904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0346600.1

Sequence Viewer

Length: 1638 bp
ATGGACCGGCTCATAAGCTTGGAGCCATCAAATTTCGTTGCAATACGGATCGAACCAGGTCAGAAATGTTACGGCCTACTCACTTTGCGCAACGTCATGTACACCATGCCTGTGGCCTTCAGGCTTCAAGCCCTGGTCAAGAATCGCTACACGGTGAGGCCTCAATCCGGGATCATATCTCCGCTCGAGAAGCTAACCATTGAGATCGTATATCACCTTCCACCGGGATCGGGCCTCCCGGACTCGTTCCCTTATTGCCATGACTCCTTCCTTTTGCATAGCGTGGTCGTGCCCGGAGCAGCCATCAAAAACTCTTCATCGACTTTCGATGCGGTCCCCAGTGACTGGTTCACAACAAAGAAGAAGCAAGTGTTCATAGACAGCGGTGTGAAGATTATGTTCATTGGTTCACCTGTTTTGGCACAACTTGTGTCCGATGGTTTGATGGACGATATCAGAGAAGTGCTCGAGAAGAGCGACCCTTCATGGAAAGCAGCCGACTCTGTGGATTCGGATGGTCAATCTTTACTTCACTTGGCTATTGCTCAAGGCCGACCCGACCTCGCCCAGCTGCTTCTCGAATTCGAGCCAGACGTGGAGGCTCAGAGCCGTTCGGGGTCGAGCCCACTTGAGGCCGCGGCTGCTTCGGGTGAGGCTTTGATAGTCGAGCTTCTGTTGGCTCGTCGTGCAAGCACTGAAAGATCAGAGTCCTCCACTTGGGGACCTATCCACCTGGCAGCCGGAGCTGGCCACGTCGAAGTTCTGAGGCTTCTTATAATTAAGGGGGCTAATGTTGATGCTCAAACAAAAGACGGAAACACCGCCTTACACCTAGCAGTGGAAGAGCGCAGAAGGGACTGTGCGAGGCTTTTGCTAGCGAGTGGTGCTAAGGCCGAAGTTCGTAATAGCAAGGAGGGTGACACCCCGCTGCACATAGCCGCAGGGTTGGGAGATGAGTACATGGTCAAGCTGTTGCTGCAAAAGGGTACTGCCAATAAAGATATCAGAAACTACGCCGGTCGAACGGCTTATGATGTTGCCGCAGAGAATGGTCACACCAAGCTCTTTGACTCCCTTCGGCTCGGAGATAGCTTGTGTATAGCGGCCAGGAAAGGAGAGGTGAGAACAATTCTGAGGGTGCTGGAGACAGGGGCCGCGATCAACGGAAGAGACCAACATGGGTGGACTGCTCTGCATAGGGCGTGCTTTAAAGGCAAAGTTGACGCCGTGCGAGCGCTGCTGGAGAAGGGTGTGGATGTGGGTGCTAAAGATGAGGACGGATACACGGCATTGCACTGCGCAGCGGAATCGGGGCATGCGGATGTGATAGATATGTTGGTGAAGAAAGGAGCTGATGCTGAAGCCAGGACTAATAAGGGTGTGACTGCGCTGCAGATTGCCGAGTCTTTGCACTATGCTGGGATTACAAGGATTCTTATGACACATGGAGGTGGTGCAATAAAAGATCAGAACATGGCACAGATTCTGTCTCACGCTTCAGTTCATTCGTTTGGGAAGAAATCCATGGGCGTTGAGGAAGAGATGATCAAGGGAGGGATGATGGTGAGGAAAAAATCGACTCGAGCTAGAGCTCTTCGTGGTAGCTTTGATCGTTCTGTGCCATTGGCTGTGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

545

Amino Acids

58.78

Weight (kDa)

7.71

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Motile_Sperm PF00635 5 - 107 1.4e-07 MSP (Major sperm protein) domain
Ank_2 PF12796 164 - 230 1.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 239 - 301 6.4e-13 Ankyrin repeats (3 copies)
Ank PF00023 242 - 270 3e-06 Ankyrin repeat
Ank_4 PF13637 243 - 292 2.6e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 263 - 313 3e-06 Ankyrin repeats (many copies)
Ank PF00023 271 - 302 7.6e-06 Ankyrin repeat
Ank_2 PF12796 297 - 359 5.2e-09 Ankyrin repeats (3 copies)
Ank PF00023 306 - 337 2.4e-07 Ankyrin repeat
Ank_2 PF12796 365 - 455 1.8e-19 Ankyrin repeats (3 copies)
Ank_5 PF13857 381 - 432 3.1e-08 Ankyrin repeats (many copies)
Ank PF00023 393 - 424 5.4e-07 Ankyrin repeat
Ank_4 PF13637 400 - 447 7.3e-12 Ankyrin repeats (many copies)
Ank_5 PF13857 413 - 467 7.5e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 418 - 483 4.2e-10 Ankyrin repeats (3 copies)
Ank PF00023 426 - 458 5.5e-08 Ankyrin repeat
Ank_3 PF13606 426 - 454 7.2e-06 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017641)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g05700
prunus_persica Prupe.1G060400_v2.0.a1
pyrus_communis pycom16g19810
rosa_laevigata RLG00000009494
rosa_multiflora Rmu_sc0000487.1_g000083
rosa_roxburghii Rroxscaffold_5G00341780
rosa_rugosa Rorug03G0346600
rosa_samantha Rh4AG073900 Rh4BG071200 Rh4CG079400 Rh4DG068700
rosa_wichuraiana Rw4G005990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 776
Acc16I TGCGCA 2 cut(s) 89, 1300
AccB7I CCANNNNNTGG 1 cut(s) 345
AccBSI CCGCTC 1 cut(s) 184
AccII CGCG 2 cut(s) 638, 1157
AclWI GGATC 3 cut(s) 56, 179, 235
AcoI YGGCCR 2 cut(s) 748, 1104
AcsI RAATTY 2 cut(s) 31, 581
AcuI CTGAAG 3 cut(s) 103, 1380, 1482
AcyI GRCGYC 1 cut(s) 1224
AfaI GTAC 3 cut(s) 101, 959, 988
AfeI AGCGCT 1 cut(s) 1236
AfiI CCNNNNNNNGG 7 cut(s) 167, 223, 230, 345, 631, 717, 838
AgsI TTSAA 1 cut(s) 128
AjiI CACGTC 2 cut(s) 595, 754
AjnI CCWGG 5 cut(s) 55, 132, 732, 1106, 1364
Alw21I GWGCWC 2 cut(s) 468, 1594
Alw26I GTCTC 3 cut(s) 1139, 1164, 1494
AlwI GGATC 3 cut(s) 56, 179, 235
AlwNI CAGNNNCTG 2 cut(s) 345, 1486
Ama87I CYCGRG 3 cut(s) 185, 467, 1581
Aor51HI AGCGCT 1 cut(s) 1236
ApoI RAATTY 2 cut(s) 31, 581
AspLEI GCGC 5 cut(s) 90, 849, 1237, 1301, 1390
AspS9I GGNCC 5 cut(s) 4, 232, 334, 722, 1152
AsuC2I CCSGG 4 cut(s) 169, 225, 239, 294
AsuHPI GGTGA 8 cut(s) 166, 206, 402, 662, 929, 1132, 1351, 1576
AsuNHI GCTAGC 1 cut(s) 874
AvaI CYCGRG 3 cut(s) 185, 467, 1581
AvaII GGWCC 3 cut(s) 4, 334, 722
BaeGI GKGCMC 1 cut(s) 294
BalI TGGCCA 1 cut(s) 750
BanII GRGCYC 2 cut(s) 626, 1594
BarI GAAGNNNNNNTAC 2 cut(s) 201, 233
Bbv12I GWGCWC 2 cut(s) 468, 1594
BccI CCATC 6 cut(s) 34, 311, 431, 439, 509, 1555
BceAI ACGGC 5 cut(s) 88, 594, 1041, 1211, 1302
BcgI CGANNNNNNTGC 4 cut(s) 853, 887, 1290, 1324
BciT130I CCWGG 5 cut(s) 57, 134, 734, 1108, 1366
BciVI GTATCC 1 cut(s) 1274
BclI TGATCA 1 cut(s) 1545
BcnI CCSGG 4 cut(s) 169, 225, 239, 294
BcoDI GTCTC 3 cut(s) 1139, 1164, 1494
BfaI CTAG 3 cut(s) 833, 875, 1587
BfmI CTRYAG 1 cut(s) 1391
BfoI RGCGCY 1 cut(s) 1238
BfuI GTATCC 1 cut(s) 1274
Bme1390I CCNGG 9 cut(s) 57, 134, 169, 225, 239, 294, 734, 1108, 1366
Bme18I GGWCC 3 cut(s) 4, 334, 722
BmeT110I CYCGRG 3 cut(s) 185, 467, 1581
BmgBI CACGTC 2 cut(s) 595, 754
BmgT120I GGNCC 5 cut(s) 4, 232, 334, 722, 1152
BmiI GGNNCC 4 cut(s) 24, 336, 723, 1153
BmrFI CCNGG 9 cut(s) 57, 134, 169, 225, 239, 294, 734, 1108, 1366
BmrI ACTGGG 1 cut(s) 333
BmsI GCATC 3 cut(s) 319, 787, 1345
BmtI GCTAGC 1 cut(s) 878
BmuI ACTGGG 1 cut(s) 333
BplI GAGNNNNNCTC 2 cut(s) 450, 482
BpmI CTGGAG 2 cut(s) 1163, 1262
Bpu10I CCTNAGC 1 cut(s) 888
BpuEI CTTGAG 2 cut(s) 531, 650
BpuMI CCSGG 4 cut(s) 169, 225, 239, 294
BsaHI GRCGYC 1 cut(s) 1224
BsaI GGTCTC 1 cut(s) 1164
BsaJI CCNNGG 3 cut(s) 132, 636, 1524
Bsc4I CCNNNNNNNGG 7 cut(s) 167, 223, 230, 345, 631, 717, 838
Bse118I RCCGGY 2 cut(s) 6, 1016
Bse1I ACTGG 2 cut(s) 339, 350
Bse3DI GCAATG 1 cut(s) 1289
BseBI CCWGG 5 cut(s) 57, 134, 734, 1108, 1366
BseDI CCNNGG 3 cut(s) 132, 636, 1524
BseGI GGATG 4 cut(s) 520, 1261, 1327, 1563
BseLI CCNNNNNNNGG 7 cut(s) 167, 223, 230, 345, 631, 717, 838
BseMI GCAATG 1 cut(s) 1289
BseMII CTCAG 3 cut(s) 617, 755, 1124
BseNI ACTGG 2 cut(s) 339, 350
BseSI GKGCMC 1 cut(s) 294
BseYI CCCAGC 2 cut(s) 567, 1418
BsgI GTGCAG 1 cut(s) 914
Bsh1236I CGCG 2 cut(s) 638, 1157
Bsh1285I CGRYCG 1 cut(s) 1021
BsiEI CGRYCG 1 cut(s) 1021
BsiHKAI GWGCWC 2 cut(s) 468, 1594
BsiHKCI CYCGRG 3 cut(s) 185, 467, 1581
BsiSI CCGG 7 cut(s) 7, 168, 224, 239, 294, 741, 1017
BslFI GGGAC 3 cut(s) 320, 735, 869
BslI CCNNNNNNNGG 7 cut(s) 167, 223, 230, 345, 631, 717, 838
BsmAI GTCTC 3 cut(s) 1139, 1164, 1494
BsmFI GGGAC 3 cut(s) 320, 735, 869
Bso31I GGTCTC 1 cut(s) 1164
BsoBI CYCGRG 3 cut(s) 185, 467, 1581
Bsp1286I GDGCHC 4 cut(s) 294, 468, 626, 1594
Bsp1407I TGTACA 1 cut(s) 99
Bsp143I GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
Bsp19I CCATGG 1 cut(s) 1524
BspCNI CTCAG 3 cut(s) 616, 756, 1125
BspFNI CGCG 2 cut(s) 638, 1157
BspLI GGNNCC 4 cut(s) 24, 336, 723, 1153
BspMAI CTGCAG 1 cut(s) 1395
BspOI GCTAGC 1 cut(s) 878
BspPI GGATC 3 cut(s) 56, 179, 235
BspQI GCTCTTC 3 cut(s) 467, 837, 1599
BspTNI GGTCTC 1 cut(s) 1164
BsrBI CCGCTC 1 cut(s) 184
BsrDI GCAATG 1 cut(s) 1289
BsrFI RCCGGY 2 cut(s) 6, 1016
BsrGI TGTACA 1 cut(s) 99
BsrI ACTGG 2 cut(s) 339, 350
BssAI RCCGGY 2 cut(s) 6, 1016
BssECI CCNNGG 3 cut(s) 132, 636, 1524
BssMI GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
BssNI GRCGYC 1 cut(s) 1224
BssT1I CCWWGG 1 cut(s) 1524
Bst2UI CCWGG 5 cut(s) 57, 134, 734, 1108, 1366
Bst4CI ACNGT 2 cut(s) 154, 860
Bst6I CTCTTC 6 cut(s) 319, 467, 837, 1162, 1533, 1599
BstACI GRCGYC 1 cut(s) 1224
BstAUI TGTACA 1 cut(s) 99
BstC8I GCNNGC 6 cut(s) 691, 748, 876, 1204, 1233, 1317
BstDEI CTNAG 4 cut(s) 603, 764, 888, 1133
BstDSI CCRYGG 2 cut(s) 636, 1524
BstF5I GGATG 4 cut(s) 520, 1261, 1327, 1563
BstFNI CGCG 2 cut(s) 638, 1157
BstH2I RGCGCY 1 cut(s) 1238
BstHHI GCGC 5 cut(s) 90, 849, 1237, 1301, 1390
BstKTI GATC 9 cut(s) 51, 174, 207, 230, 704, 1161, 1468, 1548, 1612
BstMAI GTCTC 3 cut(s) 1139, 1164, 1494
BstMBI GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
BstMCI CGRYCG 1 cut(s) 1021
BstMWI GCNNNNNNNGC 9 cut(s) 190, 641, 686, 743, 884, 976, 1212, 1232, 1237
BstNI CCWGG 5 cut(s) 57, 134, 734, 1108, 1366
BstNSI RCATGY 1 cut(s) 1319
BstSCI CCNGG 9 cut(s) 55, 132, 167, 223, 237, 292, 732, 1106, 1364
BstSFI CTRYAG 1 cut(s) 1391
BstSLI GKGCMC 1 cut(s) 294
BstUI CGCG 2 cut(s) 638, 1157
BstXI CCANNNNNNTGG 1 cut(s) 112
BsuI GTATCC 1 cut(s) 1274
BtgI CCRYGG 2 cut(s) 636, 1524
BtrI CACGTC 2 cut(s) 595, 754
BtsCI GGATG 4 cut(s) 520, 1261, 1327, 1563
BtsI GCAGTG 2 cut(s) 843, 1294
BtsIMutI CAGTG 4 cut(s) 346, 693, 843, 1294
Cac8I GCNNGC 6 cut(s) 691, 748, 876, 1204, 1233, 1317
CaiI CAGNNNCTG 2 cut(s) 345, 1486
CfoI GCGC 5 cut(s) 90, 849, 1237, 1301, 1390
Cfr10I RCCGGY 2 cut(s) 6, 1016
Cfr13I GGNCC 5 cut(s) 4, 232, 334, 722, 1152
Cfr42I CCGCGG 1 cut(s) 639
CseI GACGC 1 cut(s) 1232
CsiI ACCWGGT 1 cut(s) 55
Csp6I GTAC 3 cut(s) 100, 958, 987
CspCI CAANNNNNGTGG 2 cut(s) 1163, 1198
CviQI GTAC 3 cut(s) 100, 958, 987
DdeI CTNAG 4 cut(s) 603, 764, 888, 1133
DpnI GATC 9 cut(s) 50, 173, 206, 229, 703, 1160, 1467, 1547, 1611
DpnII GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
DraI TTTAAA 1 cut(s) 1210
EaeI YGGCCR 2 cut(s) 748, 1104
Eam1104I CTCTTC 6 cut(s) 319, 467, 837, 1162, 1533, 1599
EarI CTCTTC 6 cut(s) 319, 467, 837, 1162, 1533, 1599
Ecl136II GAGCTC 1 cut(s) 1592
Eco130I CCWWGG 1 cut(s) 1524
Eco147I AGGCCT 1 cut(s) 160
Eco24I GRGCYC 2 cut(s) 626, 1594
Eco31I GGTCTC 1 cut(s) 1164
Eco32I GATATC 2 cut(s) 454, 1003
Eco47I GGWCC 3 cut(s) 4, 334, 722
Eco47III AGCGCT 1 cut(s) 1236
Eco53kI GAGCTC 1 cut(s) 1592
Eco57I CTGAAG 3 cut(s) 103, 1380, 1482
Eco88I CYCGRG 3 cut(s) 185, 467, 1581
EcoICRI GAGCTC 1 cut(s) 1592
EcoO109I RGGNCCY 1 cut(s) 722
EcoRI GAATTC 1 cut(s) 581
EcoRII CCWGG 5 cut(s) 55, 132, 732, 1106, 1364
EcoRV GATATC 2 cut(s) 454, 1003
EcoT14I CCWWGG 1 cut(s) 1524
EcoT38I GRGCYC 2 cut(s) 626, 1594
ErhI CCWWGG 1 cut(s) 1524
FaqI GGGAC 3 cut(s) 320, 735, 869
FauI CCCGC 1 cut(s) 933
FbaI TGATCA 1 cut(s) 1545
FokI GGATG 4 cut(s) 527, 1268, 1334, 1570
FriOI GRGCYC 2 cut(s) 626, 1594
FspBI CTAG 3 cut(s) 833, 875, 1587
FspI TGCGCA 2 cut(s) 89, 1300
GlaI GCGC 5 cut(s) 89, 848, 1236, 1300, 1389
GsaI CCCAGC 2 cut(s) 571, 1422
GsuI CTGGAG 2 cut(s) 1163, 1262
HaeII RGCGCY 1 cut(s) 1238
HapII CCGG 7 cut(s) 7, 168, 224, 239, 294, 741, 1017
HgaI GACGC 1 cut(s) 1232
HhaI GCGC 5 cut(s) 90, 849, 1237, 1301, 1390
Hin1I GRCGYC 1 cut(s) 1224
Hin6I GCGC 5 cut(s) 88, 847, 1235, 1299, 1388
HinP1I GCGC 5 cut(s) 88, 847, 1235, 1299, 1388
HincII GTYRAC 1 cut(s) 1222
HindII GTYRAC 1 cut(s) 1222
HindIII AAGCTT 1 cut(s) 16
HpaII CCGG 7 cut(s) 7, 168, 224, 239, 294, 741, 1017
HphI GGTGA 8 cut(s) 166, 206, 402, 662, 929, 1132, 1351, 1576
Hpy166II GTNNAC 5 cut(s) 102, 351, 410, 1185, 1222
Hpy188III TCNNGA 4 cut(s) 139, 187, 469, 578
Hpy8I GTNNAC 5 cut(s) 102, 351, 410, 1185, 1222
Hpy99I CGWCG 2 cut(s) 687, 758
HpyAV CCTTC 7 cut(s) 127, 227, 277, 492, 846, 1085, 1240
HpyCH4III ACNGT 2 cut(s) 154, 860
HpyCH4IV ACGT 3 cut(s) 93, 594, 753
HpyF10VI GCNNNNNNNGC 9 cut(s) 190, 641, 686, 743, 884, 976, 1212, 1232, 1237
HpyF3I CTNAG 4 cut(s) 603, 764, 888, 1133
HpySE526I ACGT 3 cut(s) 93, 594, 753
Hsp92I GRCGYC 1 cut(s) 1224
HspAI GCGC 5 cut(s) 88, 847, 1235, 1299, 1388
Ksp22I TGATCA 1 cut(s) 1545
KspI CCGCGG 1 cut(s) 639
Kzo9I GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
LguI GCTCTTC 3 cut(s) 467, 837, 1599
LmnI GCTCC 4 cut(s) 22, 296, 743, 1349
LweI GCATC 3 cut(s) 319, 787, 1345
MabI ACCWGGT 1 cut(s) 55
MaeI CTAG 3 cut(s) 833, 875, 1587
MaeII ACGT 3 cut(s) 93, 594, 753
MaeIII GTNAC 5 cut(s) 68, 341, 917, 1052, 1381
MalI GATC 9 cut(s) 50, 173, 206, 229, 703, 1160, 1467, 1547, 1611
MbiI CCGCTC 1 cut(s) 184
MboI GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
MhlI GDGCHC 4 cut(s) 294, 468, 626, 1594
MlsI TGGCCA 1 cut(s) 750
MluCI AATT 4 cut(s) 31, 581, 777, 1128
MluNI TGGCCA 1 cut(s) 750
MlyI GAGTC 7 cut(s) 236, 257, 494, 716, 1064, 1412, 1573
Mox20I TGGCCA 1 cut(s) 750
MscI TGGCCA 1 cut(s) 750
MseI TTAA 3 cut(s) 780, 1209, 1636
MslI CAYNNNNRTG 3 cut(s) 110, 1320, 1449
Msp20I TGGCCA 1 cut(s) 750
MspA1I CMGCKG 5 cut(s) 384, 571, 638, 928, 1304
MspI CCGG 7 cut(s) 7, 168, 224, 239, 294, 741, 1017
MspR9I CCNGG 9 cut(s) 57, 134, 169, 225, 239, 294, 734, 1108, 1366
MvaI CCWGG 5 cut(s) 57, 134, 734, 1108, 1366
MvnI CGCG 2 cut(s) 638, 1157
MwoI GCNNNNNNNGC 9 cut(s) 190, 641, 686, 743, 884, 976, 1212, 1232, 1237
NciI CCSGG 4 cut(s) 169, 225, 239, 294
NcoI CCATGG 1 cut(s) 1524
NdeII GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
NheI GCTAGC 1 cut(s) 874
NlaIV GGNNCC 4 cut(s) 24, 336, 723, 1153
NmeAIII GCCGAG 1 cut(s) 1426
NmuCI GTSAC 4 cut(s) 341, 917, 1052, 1381
NsbI TGCGCA 2 cut(s) 89, 1300
NspI RCATGY 1 cut(s) 1319
PaeI GCATGC 1 cut(s) 1319
PaeR7I CTCGAG 3 cut(s) 185, 467, 1581
PceI AGGCCT 1 cut(s) 160
PciSI GCTCTTC 3 cut(s) 467, 837, 1599
PcsI WCGNNNNNNNCGW 2 cut(s) 474, 591
PfeI GAWTC 5 cut(s) 142, 509, 1307, 1432, 1483
PflMI CCANNNNNTGG 1 cut(s) 345
PfoI TCCNGGA 2 cut(s) 167, 237
PleI GAGTC 7 cut(s) 236, 257, 494, 715, 1064, 1411, 1573
PpsI GAGTC 7 cut(s) 236, 257, 494, 715, 1064, 1411, 1573
PpuMI RGGWCCY 1 cut(s) 722
PsiI TTATAA 1 cut(s) 776
Psp124BI GAGCTC 1 cut(s) 1594
Psp5II RGGWCCY 1 cut(s) 722
Psp6I CCWGG 5 cut(s) 55, 132, 732, 1106, 1364
PspFI CCCAGC 2 cut(s) 567, 1418
PspGI CCWGG 5 cut(s) 55, 132, 732, 1106, 1364
PspN4I GGNNCC 4 cut(s) 24, 336, 723, 1153
PspPI GGNCC 5 cut(s) 4, 232, 334, 722, 1152
PspPPI RGGWCCY 1 cut(s) 722
PspXI VCTCGAGB 1 cut(s) 1581
PstI CTGCAG 1 cut(s) 1395
PstNI CAGNNNCTG 2 cut(s) 345, 1486
PvuII CAGCTG 1 cut(s) 571
RsaI GTAC 3 cut(s) 101, 959, 988
RsaNI GTAC 3 cut(s) 100, 958, 987
RseI CAYNNNNRTG 3 cut(s) 110, 1320, 1449
SacI GAGCTC 1 cut(s) 1594
SacII CCGCGG 1 cut(s) 639
SapI GCTCTTC 3 cut(s) 467, 837, 1599
SaqAI TTAA 3 cut(s) 780, 1209, 1636
Sau3AI GATC 9 cut(s) 48, 171, 204, 227, 701, 1158, 1465, 1545, 1609
Sau96I GGNCC 5 cut(s) 4, 232, 334, 722, 1152
SchI GAGTC 7 cut(s) 236, 257, 494, 716, 1064, 1412, 1573
ScrFI CCNGG 9 cut(s) 57, 134, 169, 225, 239, 294, 734, 1108, 1366
SduI GDGCHC 4 cut(s) 294, 468, 626, 1594
SexAI ACCWGGT 1 cut(s) 55
SfaNI GCATC 3 cut(s) 319, 787, 1345
SfcI CTRYAG 1 cut(s) 1391
Sfr274I CTCGAG 3 cut(s) 185, 467, 1581
Sfr303I CCGCGG 1 cut(s) 639
SgrBI CCGCGG 1 cut(s) 639
SinI GGWCC 3 cut(s) 4, 334, 722
SlaI CTCGAG 3 cut(s) 185, 467, 1581
SmiMI CAYNNNNRTG 3 cut(s) 110, 1320, 1449
SmlI CTYRAG 5 cut(s) 185, 467, 546, 629, 1581
SmoI CTYRAG 5 cut(s) 185, 467, 546, 629, 1581
SphI GCATGC 1 cut(s) 1319
Sse9I AATT 4 cut(s) 31, 581, 777, 1128
SseBI AGGCCT 1 cut(s) 160
SspMI CTAG 3 cut(s) 833, 875, 1587
SstI GAGCTC 1 cut(s) 1594
StuI AGGCCT 1 cut(s) 160
StyD4I CCNGG 9 cut(s) 55, 132, 167, 223, 237, 292, 732, 1106, 1364
StyI CCWWGG 1 cut(s) 1524
TaaI ACNGT 2 cut(s) 154, 860
TaiI ACGT 3 cut(s) 96, 597, 756
TasI AATT 4 cut(s) 31, 581, 777, 1128
TatI WGTACW 2 cut(s) 99, 957
TauI GCSGC 6 cut(s) 638, 641, 941, 1043, 1106, 1157
TfiI GAWTC 5 cut(s) 142, 509, 1307, 1432, 1483
Tru1I TTAA 3 cut(s) 780, 1209, 1636
Tru9I TTAA 3 cut(s) 780, 1209, 1636
TscAI CASTG 4 cut(s) 346, 700, 843, 1301
TseFI GTSAC 4 cut(s) 341, 917, 1052, 1381
Tsp45I GTSAC 4 cut(s) 341, 917, 1052, 1381
TspDTI ATGAA 5 cut(s) 306, 364, 391, 474, 1493
TspGWI ACGGA 4 cut(s) 61, 828, 1179, 1293
TspRI CASTG 4 cut(s) 346, 700, 843, 1301
Van91I CCANNNNNTGG 1 cut(s) 345
VpaK11BI GGWCC 3 cut(s) 4, 334, 722
XapI RAATTY 2 cut(s) 31, 581
XceI RCATGY 1 cut(s) 1319
XhoI CTCGAG 3 cut(s) 185, 467, 1581
XspI CTAG 3 cut(s) 833, 875, 1587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.