Rorug04G0013600

F-box protein At5g07610-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0018022
Physical Location & Seq
Reverse (-)
2171035 .. 2174573
3539 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0013600.1

Sequence Viewer

Length: 3123 bp
ATGGCTTATCTGACCAATGAAGCAGCAGCCAGATCTTCATTTTCTTATCTCTCACTATCTTCTACTGATCACCAAAATCATTACACATACGAGGTCTTCCTGAGTTTTCGAGGCAAGGATACGAGGTATACGTTTACAGATCACTTGTACAATGCTTTGTGTCAGAGGGGAATTGAGACCTTTAGAGATGATAAGCTCAGAAGAGGAGAAGAAATATCACAAGAGCTCCTCAAAGCAATTGAGGATTCGAGACTTTCAATCATCGTCTTCTCTCAAAATTATGCTGCCTCAAGGTGGTGCTTAGATGAATTGGTCAAGATACTTGAATGCAGAAAATCCATAGGCCAGGAGGTTAGAGCTATTTTCTACAAGGTGGATCCTTCAGATGTTCGACATCAAAGTGGTGCTTTCGGTGACGCATTTGCTATGCTTGATCAATGCAAATACAAGGATAGCATGGGCAAATGGAAGGCAGCTCTTAAAGAAGCAACAGATTTGTCTGGATGGCCTTTGAAGGATGGCGAGTACGAGGGTAAATTTATCAACGACATTGTTGTGGAGTTGTCCACCCAAGTAGTAAACCCTTCATGTGAGTTGCAAGTAGCTGCACATCCAATTGGATTAGAGTCTTGTAGGCAGGATGTCAACAGACTTTTAGATGTCGAGGAAATTATTCCTCGCATGGTTGGCATATGGGGGCCTGGTGGGATAGGAAAGACCACAATTGCAAAAGATGTGTTTAATTCAATTCGCCATAAATTTGAAGGTAGCTGTTTCCTGGCAGATGTTAGATCAAAATCCAATTCAAATTCAAGTTCAATCGACTATCAAAACCTAACCCAACTACAAGAGACATTTTTATCTGACATTTTAAGAAACTCAATTTTAAAGGCGAGCAGTGTTGATCAAGGAGTCAGTTTTATAAGGAAAAGGATGCGACATAAAAAAGTTCTCTTAATCCTTGATGACGTAAGTCATTCCAGCCAATTACAATACTTAGCTCCATCCTCTGATTGTTTCGGGCCGGGCAGTAGAATTATCATAACAACAAGAGATAAACGTTGGCTAACTGCTCATCGAGTTGATTCAGTATACGAGGTCAACATGTTAGATGATCGACAGGCTTTGAACTTGTTTAGTTTGAATGCATTCAAAAGAAATGGGCCTCCAAGAGATTATCTGGAATTTGCACATTGCGTTGTACGCTATGCCCAGGGCCTTCCATTAGCATTGATAGTTTTAGGCTCTCATTTATTTCGTAAAAGCAAAGATGAGTGGAAAGCTACATTAGATAGTTGCAAAAGAGAAGATCCCCATAGAGAGATAAGAAACATTCTGAAAATAAGTTATGATTCTCTGGGACTAGATTTACAAGGATATTTTCTTGATATCGAATGTTTCTTTAAAGATCAGCAAGTAGACCGTGTGAAACCAATACTAGAAGCTTGTTACGACCTCAAATCAGTGACTGGTATTGCACAACTCCAAGAAAAGGCCTTAATAAGAATTGATAGAGTTGAGACTTGGTATGGAGAAAAAGATTATATTTGGATGCATGACTTGATAGAAGAAATGGCTAAAGAAATATTGTATCAAGAGTCACCTGGTGAGCCCGGGAAACGCAGCAGAATCTGGAGTAAAGATGATGTCAACCACGTTTTAACAAATAACACAGGAACAAATAAAGTTATAGGTATAGGTATCCGGGTCAAGCGGCGATCATCTACGATATCTTTGAATGCTAAAAGCTTTTCACTGATAAAGAATCTTAAATATATTCATATGGGCCAGAACCTGGAATACGAATGTTTTTCTGGAGAGATTGATTATCTTTCCAACCAGTTGAGGTGGCTTGATTGGCCTAAATGTCCGCTGCAATCTTTTCCATATGATTTTCATCCAGAAAAACTTGCAGGGTTAGATATTCTTGATAGCCGTGGAATCACACGACTATGGGAGGGACGTAAGAATAGGCTAACATGTATGAATTTAAGGGGTTGTGAATCCTTAACAGGACTCCCAAACTTCAGAGAAATCCCCAACTTGAGACAATTGGATCTATCAGGCACTTGCAAGAAAGAATTGCATTCGTCCATTACAATACTTAATGGGCTAGAACAGTTGACTCTAATGAATTGTAAAAATCTTACGACTCTCCTGTATAATATTTATAAGTTGCGCAATCTAGAGTTTCTTAATGTGAATGATTGCCCAAGACCGGTTACATTTCCAAAAATTCCAATAAAGATGGATTCTTTAAGAAGACTTTTTCTACAACGGAGTGACATCAGAGAATTAGATGAGTCAATTAGAAATCTCATTGGGCTTGAATGGTTGGATCTCAATCATTGCAAAAATCTCACAACTCTACCGTGCAGTTATGAGTTGCAAAATTTAGAGTTGCTTACTCTTGATGGCTGCTCGAAACTTGTCAGATTTCCAAGAAAAACCAAAATTTTGAATGTCGATGGTAGCTCACTATCGCTTCCCAAGCTAGGTTTGTTAAGTATCAGAGGATGCAGTTTATTATCAGATTGTGATTTCCTCAAGACTCTTGATTGCTGGGAAATATTAGAGTGGCTTATTCTGTCAAGAAACAATTTTGTTAGTCTTCCTGCTTGCTTCACCAAATTTGTCAACTTACGGCGGCTTGACTTGTCCCGTTGCAACAGACTCAGAGGAATTCCGGAGCTTCCACCAAACGTTGGTCTAGACATAAGTGGTTGTGAATCACTGATAGAGGCGGCGTCGCCTTCAGTTGAAGATGATTGGGAATCATCGGACATAGAGGGGCCGTTGTCGTCACTTGAAGAAGATTTTGAATCACCTGACATAGAGGGGGCGTTGTGGTCACTTGAAGAAGATTGTGAATCACCGGACATAGAGGGGGCGTCGCCGTCAATTGAAGATGATGATGAAGAAGAGCCAACTCCGTCACGGCTGTCTCTGTCTTCCGAACAAGCAACAGTGATTACTCCAGAACGACCCGGGCAAGCATCGATGGTGCACTTTGCTCATGAAATGGCTATCTCCCCAATCCCCATGTTTCATGACCTGCACAGCTCCCATGACTCAACTACTCCTCCACAGCTTCAACACCGAGAGAAACCAACTCGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

1040

Amino Acids

118.68

Weight (kDa)

5.71

Isoelectric Point (pI)

52.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 30 - 192 7.5e-52 TIR domain
TIR_2 PF13676 32 - 126 1.7e-13 TIR domain
NB-ARC PF00931 216 - 386 1.2e-18 NB-ARC domain
ATPase_2 PF01637 228 - 326 5e-06 ATPase domain predominantly from Archaea
WHD_ROQ1 PF23282 459 - 532 1.2e-08 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 726 - 900 1.9e-20 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018022)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g06960 FvH4_4g06960
rosa_chinensis RchiOBHm_Chr4g0399001
rosa_laevigata RLG00000009302
rosa_multiflora Rmu_sc0003033.1_g000018
rosa_roxburghii Rroxscaffold_5G00344060
rosa_rugosa Rorug04G0013600
rosa_samantha Rh4AG091400 Rh4BG089100 Rh4DG084200
rosa_wichuraiana Rw4G007570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 923, 2172
Acc16I TGCGCA 1 cut(s) 2180
Acc36I ACCTGC 1 cut(s) 3063
AccB7I CCANNNNNTGG 2 cut(s) 1795, 2705
AccI GTMKAC 3 cut(s) 128, 1092, 1419
AccIII TCCGGA 1 cut(s) 2686
AciI CCGC 4 cut(s) 1714, 1871, 2647, 2744
AclI AACGTT 2 cut(s) 1060, 2703
AclWI GGATC 5 cut(s) 371, 384, 1304, 2064, 2346
AcuI CTGAAG 3 cut(s) 366, 2011, 2739
AcyI GRCGYC 2 cut(s) 2747, 2891
AdeI CACNNNGTG 1 cut(s) 1607
AfaI GTAC 3 cut(s) 149, 527, 1203
AfiI CCNNNNNNNGG 6 cut(s) 294, 1492, 1795, 2218, 2495, 2705
AflIII ACRYGT 2 cut(s) 1104, 1979
AgeI ACCGGT 1 cut(s) 2218
AjnI CCWGG 6 cut(s) 345, 700, 777, 1212, 1603, 1794
Alw21I GWGCWC 2 cut(s) 228, 3009
Alw26I GTCTC 6 cut(s) 170, 244, 845, 1514, 2041, 2949
Alw44I GTGCAC 1 cut(s) 3005
AlwI GGATC 5 cut(s) 371, 384, 1304, 2064, 2346
AlwNI CAGNNNCTG 3 cut(s) 1469, 1632, 1795
Ama87I CYCGRG 2 cut(s) 1613, 2987
Aor13HI TCCGGA 1 cut(s) 2686
ApaLI GTGCAC 1 cut(s) 3005
ApeKI GCWGC 8 cut(s) 23, 26, 284, 473, 605, 1623, 1873, 2418
AsiGI ACCGGT 1 cut(s) 2218
Asp700I GAANNNNTTC 2 cut(s) 672, 1148
AspLEI GCGC 1 cut(s) 2181
AspS9I GGNCC 6 cut(s) 698, 1022, 1163, 1216, 1786, 2792
AsuC2I CCSGG 6 cut(s) 1026, 1614, 1615, 1706, 2988, 2989
AsuHPI GGTGA 7 cut(s) 62, 425, 1593, 1619, 2617, 2817, 2865
AvaI CYCGRG 2 cut(s) 1613, 2987
BaeGI GKGCMC 1 cut(s) 3009
BamHI GGATCC 1 cut(s) 376
BanII GRGCYC 2 cut(s) 228, 1614
BbsI GAAGAC 5 cut(s) 88, 259, 2269, 2603, 2943
Bbv12I GWGCWC 2 cut(s) 228, 3009
BbvI GCAGC 8 cut(s) 35, 38, 271, 485, 592, 1635, 1860, 2405
BccI CCATC 7 cut(s) 498, 512, 1012, 2242, 2408, 2462, 2995
BceAI ACGGC 5 cut(s) 1920, 2660, 2779, 2881, 2954
BciT130I CCWGG 6 cut(s) 347, 702, 779, 1214, 1605, 1796
BciVI GTATCC 2 cut(s) 112, 1712
BclI TGATCA 3 cut(s) 67, 433, 904
BcnI CCSGG 6 cut(s) 1026, 1614, 1615, 1706, 2988, 2989
BcoDI GTCTC 6 cut(s) 170, 244, 845, 1514, 2041, 2949
BfaI CTAG 6 cut(s) 1364, 1439, 2114, 2186, 2495, 2711
BfuAI ACCTGC 1 cut(s) 3063
BfuI GTATCC 2 cut(s) 112, 1712
BglII AGATCT 1 cut(s) 32
BmeT110I CYCGRG 2 cut(s) 1613, 2987
BmgT120I GGNCC 6 cut(s) 698, 1022, 1163, 1216, 1786, 2792
BmiI GGNNCC 3 cut(s) 378, 699, 2793
BmsI GCATC 4 cut(s) 924, 1542, 2507, 3005
BoxI GACNNNNGTC 1 cut(s) 972
BpiI GAAGAC 5 cut(s) 88, 259, 2269, 2603, 2943
BpmI CTGGAG 3 cut(s) 1654, 1836, 2961
BpuEI CTTGAG 3 cut(s) 274, 2065, 2531
BpuMI CCSGG 6 cut(s) 1026, 1614, 1615, 1706, 2988, 2989
Bsa29I ATCGAT 1 cut(s) 2999
BsaBI GATNNNNATC 3 cut(s) 796, 1896, 2343
BsaHI GRCGYC 2 cut(s) 2747, 2891
BsaI GGTCTC 1 cut(s) 170
BsaJI CCNNGG 5 cut(s) 1212, 1213, 1613, 1936, 2987
BsaWI WCCGGW 3 cut(s) 2218, 2686, 2875
BsaXI ACNNNNNCTCC 4 cut(s) 210, 240, 3067, 3097
Bsc4I CCNNNNNNNGG 6 cut(s) 294, 1492, 1795, 2218, 2495, 2705
Bse118I RCCGGY 1 cut(s) 2218
Bse1I ACTGG 2 cut(s) 1474, 1840
Bse3DI GCAATG 2 cut(s) 1192, 2347
Bse8I GATNNNNATC 3 cut(s) 796, 1896, 2343
BseAI TCCGGA 1 cut(s) 2686
BseBI CCWGG 6 cut(s) 347, 702, 779, 1214, 1605, 1796
BseCI ATCGAT 1 cut(s) 2999
BseDI CCNNGG 5 cut(s) 1212, 1213, 1613, 1936, 2987
BseGI GGATG 9 cut(s) 509, 523, 610, 646, 939, 1004, 1557, 1897, 2522
BseJI GATNNNNATC 3 cut(s) 796, 1896, 2343
BseLI CCNNNNNNNGG 6 cut(s) 294, 1492, 1795, 2218, 2495, 2705
BseMI GCAATG 2 cut(s) 1192, 2347
BseMII CTCAG 3 cut(s) 92, 211, 2689
BseNI ACTGG 2 cut(s) 1474, 1840
BseRI GAGGAG 3 cut(s) 218, 219, 3072
BseSI GKGCMC 1 cut(s) 3009
BseXI GCAGC 8 cut(s) 35, 38, 271, 485, 592, 1635, 1860, 2405
BseYI CCCAGC 1 cut(s) 2562
BsgI GTGCAG 3 cut(s) 591, 2395, 3041
BshTI ACCGGT 1 cut(s) 2218
BshVI ATCGAT 1 cut(s) 2999
BsiHKAI GWGCWC 2 cut(s) 228, 3009
BsiHKCI CYCGRG 2 cut(s) 1613, 2987
BsiSI CCGG 7 cut(s) 1025, 1614, 1705, 2219, 2687, 2876, 2988
BslFI GGGAC 3 cut(s) 1374, 1974, 2644
BslI CCNNNNNNNGG 6 cut(s) 294, 1492, 1795, 2218, 2495, 2705
BsmAI GTCTC 6 cut(s) 170, 244, 845, 1514, 2041, 2949
BsmFI GGGAC 3 cut(s) 1374, 1974, 2644
BsmI GAATGC 5 cut(s) 332, 1148, 1150, 1744, 2086
Bso31I GGTCTC 1 cut(s) 170
BsoBI CYCGRG 2 cut(s) 1613, 2987
Bsp1286I GDGCHC 3 cut(s) 228, 1614, 3009
Bsp13I TCCGGA 1 cut(s) 2686
Bsp1407I TGTACA 1 cut(s) 147
BspACI CCGC 4 cut(s) 1714, 1871, 2647, 2744
BspCNI CTCAG 3 cut(s) 93, 210, 2688
BspDI ATCGAT 1 cut(s) 2999
BspEI TCCGGA 1 cut(s) 2686
BspHI TCATGA 3 cut(s) 3016, 3049, 3119
BspLI GGNNCC 3 cut(s) 378, 699, 2793
BspMI ACCTGC 1 cut(s) 3063
BspPI GGATC 5 cut(s) 371, 384, 1304, 2064, 2346
BspQI GCTCTTC 1 cut(s) 2916
BspTNI GGTCTC 1 cut(s) 170
BsrDI GCAATG 2 cut(s) 1192, 2347
BsrFI RCCGGY 1 cut(s) 2218
BsrGI TGTACA 1 cut(s) 147
BsrI ACTGG 2 cut(s) 1474, 1840
BssAI RCCGGY 1 cut(s) 2218
BssECI CCNNGG 5 cut(s) 1212, 1213, 1613, 1936, 2987
BssNAI GTATAC 2 cut(s) 129, 1093
BssNI GRCGYC 2 cut(s) 2747, 2891
Bst1107I GTATAC 2 cut(s) 129, 1093
Bst2UI CCWGG 6 cut(s) 347, 702, 779, 1214, 1605, 1796
Bst4CI ACNGT 4 cut(s) 1424, 2121, 2373, 2968
Bst6I CTCTTC 2 cut(s) 196, 2916
BstACI GRCGYC 2 cut(s) 2747, 2891
BstAUI TGTACA 1 cut(s) 147
BstC8I GCNNGC 3 cut(s) 895, 2620, 2994
BstDEI CTNAG 5 cut(s) 101, 197, 301, 997, 2675
BstDSI CCRYGG 1 cut(s) 1936
BstF5I GGATG 9 cut(s) 509, 523, 610, 646, 939, 1004, 1557, 1897, 2522
BstHHI GCGC 1 cut(s) 2181
BstMAI GTCTC 6 cut(s) 170, 244, 845, 1514, 2041, 2949
BstMWI GCNNNNNNNGC 4 cut(s) 687, 1203, 1858, 2491
BstNI CCWGG 6 cut(s) 347, 702, 779, 1214, 1605, 1796
BstNSI RCATGY 2 cut(s) 1108, 1983
BstPAI GACNNNNGTC 1 cut(s) 972
BstSLI GKGCMC 1 cut(s) 3009
BstV1I GCAGC 8 cut(s) 35, 38, 271, 485, 592, 1635, 1860, 2405
BstV2I GAAGAC 5 cut(s) 88, 259, 2269, 2603, 2943
BstX2I RGATCY 5 cut(s) 32, 376, 1309, 2056, 2338
BstYI RGATCY 5 cut(s) 32, 376, 1309, 2056, 2338
BstZ17I GTATAC 2 cut(s) 129, 1093
Bsu15I ATCGAT 1 cut(s) 2999
BsuI GTATCC 2 cut(s) 112, 1712
BsuTUI ATCGAT 1 cut(s) 2999
BtgI CCRYGG 1 cut(s) 1936
BtsCI GGATG 9 cut(s) 509, 523, 610, 646, 939, 1004, 1557, 1897, 2522
BtsI GCAGTG 1 cut(s) 904
BtsIMutI CAGTG 5 cut(s) 904, 1470, 1754, 2732, 2973
BveI ACCTGC 1 cut(s) 3063
Cac8I GCNNGC 3 cut(s) 895, 2620, 2994
CaiI CAGNNNCTG 3 cut(s) 1469, 1632, 1795
CciI TCATGA 3 cut(s) 3016, 3049, 3119
CfoI GCGC 1 cut(s) 2181
Cfr10I RCCGGY 1 cut(s) 2218
Cfr13I GGNCC 6 cut(s) 698, 1022, 1163, 1216, 1786, 2792
Cfr9I CCCGGG 2 cut(s) 1613, 2987
ClaI ATCGAT 1 cut(s) 2999
CseI GACGC 3 cut(s) 425, 2736, 2880
CsiI ACCWGGT 1 cut(s) 1603
Csp6I GTAC 3 cut(s) 148, 526, 1202
CspAI ACCGGT 1 cut(s) 2218
CviQI GTAC 3 cut(s) 148, 526, 1202
DdeI CTNAG 5 cut(s) 101, 197, 301, 997, 2675
DraI TTTAAA 2 cut(s) 888, 1405
DraIII CACNNNGTG 1 cut(s) 1607
Eam1104I CTCTTC 2 cut(s) 196, 2916
EarI CTCTTC 2 cut(s) 196, 2916
Ecl136II GAGCTC 1 cut(s) 226
Eco147I AGGCCT 1 cut(s) 1496
Eco24I GRGCYC 2 cut(s) 228, 1614
Eco31I GGTCTC 1 cut(s) 170
Eco32I GATATC 2 cut(s) 1390, 1731
Eco53kI GAGCTC 1 cut(s) 226
Eco57I CTGAAG 3 cut(s) 366, 2011, 2739
Eco88I CYCGRG 2 cut(s) 1613, 2987
EcoICRI GAGCTC 1 cut(s) 226
EcoO109I RGGNCCY 2 cut(s) 698, 1216
EcoRI GAATTC 1 cut(s) 2682
EcoRII CCWGG 6 cut(s) 345, 700, 777, 1212, 1603, 1794
EcoRV GATATC 2 cut(s) 1390, 1731
EcoT22I ATGCAT 2 cut(s) 1150, 1557
EcoT38I GRGCYC 2 cut(s) 228, 1614
FalI AAGNNNNNCTT 2 cut(s) 391, 423
FaqI GGGAC 3 cut(s) 1374, 1974, 2644
FauNDI CATATG 3 cut(s) 692, 1782, 1888
FbaI TGATCA 3 cut(s) 67, 433, 904
FblI GTMKAC 3 cut(s) 128, 1092, 1419
FokI GGATG 9 cut(s) 516, 530, 597, 653, 946, 991, 1564, 1884, 2529
FriOI GRGCYC 2 cut(s) 228, 1614
FspBI CTAG 6 cut(s) 1364, 1439, 2114, 2186, 2495, 2711
FspI TGCGCA 1 cut(s) 2180
GlaI GCGC 1 cut(s) 2180
GsaI CCCAGC 1 cut(s) 2566
GsuI CTGGAG 3 cut(s) 1654, 1836, 2961
HapII CCGG 7 cut(s) 1025, 1614, 1705, 2219, 2687, 2876, 2988
HgaI GACGC 3 cut(s) 425, 2736, 2880
HhaI GCGC 1 cut(s) 2181
Hin1I GRCGYC 2 cut(s) 2747, 2891
Hin6I GCGC 1 cut(s) 2179
HinP1I GCGC 1 cut(s) 2179
HincII GTYRAC 5 cut(s) 646, 1102, 1651, 2124, 2638
HindII GTYRAC 5 cut(s) 646, 1102, 1651, 2124, 2638
HindIII AAGCTT 2 cut(s) 1443, 1747
HpaII CCGG 7 cut(s) 1025, 1614, 1705, 2219, 2687, 2876, 2988
HphI GGTGA 7 cut(s) 62, 425, 1593, 1619, 2617, 2817, 2865
Hpy99I CGWCG 2 cut(s) 2752, 2896
HpyAV CCTTC 7 cut(s) 390, 463, 508, 594, 758, 1229, 2763
HpyCH4III ACNGT 4 cut(s) 1424, 2121, 2373, 2968
HpyCH4IV ACGT 6 cut(s) 131, 969, 1060, 1656, 1963, 2703
HpyF10VI GCNNNNNNNGC 4 cut(s) 687, 1203, 1858, 2491
HpyF3I CTNAG 5 cut(s) 101, 197, 301, 997, 2675
HpySE526I ACGT 6 cut(s) 131, 969, 1060, 1656, 1963, 2703
Hsp92I GRCGYC 2 cut(s) 2747, 2891
HspAI GCGC 1 cut(s) 2179
Kpn2I TCCGGA 1 cut(s) 2686
Ksp22I TGATCA 3 cut(s) 67, 433, 904
LguI GCTCTTC 1 cut(s) 2916
LmnI GCTCC 4 cut(s) 231, 1006, 2689, 3068
Lsp1109I GCAGC 8 cut(s) 35, 38, 271, 485, 592, 1635, 1860, 2405
LweI GCATC 4 cut(s) 924, 1542, 2507, 3005
MabI ACCWGGT 1 cut(s) 1603
MaeI CTAG 6 cut(s) 1364, 1439, 2114, 2186, 2495, 2711
MaeII ACGT 6 cut(s) 131, 969, 1060, 1656, 1963, 2703
MaeIII GTNAC 9 cut(s) 413, 1448, 1465, 1599, 2221, 2282, 2802, 2850, 2934
MfeI CAATTG 5 cut(s) 237, 615, 723, 2051, 2901
MflI RGATCY 5 cut(s) 32, 376, 1309, 2056, 2338
MhlI GDGCHC 3 cut(s) 228, 1614, 3009
MmeI TCCRAC 2 cut(s) 1860, 2316
Mph1103I ATGCAT 2 cut(s) 1150, 1557
MroI TCCGGA 1 cut(s) 2686
MroXI GAANNNNTTC 2 cut(s) 672, 1148
MslI CAYNNNNRTG 3 cut(s) 399, 554, 1951
MspA1I CMGCKG 1 cut(s) 1873
MspI CCGG 7 cut(s) 1025, 1614, 1705, 2219, 2687, 2876, 2988
MunI CAATTG 5 cut(s) 237, 615, 723, 2051, 2901
Mva1269I GAATGC 5 cut(s) 332, 1148, 1150, 1744, 2086
MvaI CCWGG 6 cut(s) 347, 702, 779, 1214, 1605, 1796
MwoI GCNNNNNNNGC 4 cut(s) 687, 1203, 1858, 2491
NciI CCSGG 6 cut(s) 1026, 1614, 1615, 1706, 2988, 2989
NdeI CATATG 3 cut(s) 692, 1782, 1888
NlaIV GGNNCC 3 cut(s) 378, 699, 2793
NmuCI GTSAC 7 cut(s) 413, 1465, 1599, 2282, 2802, 2850, 2934
NsbI TGCGCA 1 cut(s) 2180
NsiI ATGCAT 2 cut(s) 1150, 1557
NspI RCATGY 2 cut(s) 1108, 1983
PagI TCATGA 3 cut(s) 3016, 3049, 3119
PasI CCCWGGG 1 cut(s) 1213
PceI AGGCCT 1 cut(s) 1496
PciI ACATGT 2 cut(s) 1104, 1979
PciSI GCTCTTC 1 cut(s) 2916
PcsI WCGNNNNNNNCGW 1 cut(s) 128
PctI GAATGC 5 cut(s) 332, 1148, 1150, 1744, 2086
PdmI GAANNNNTTC 2 cut(s) 672, 1148
PflMI CCANNNNNTGG 2 cut(s) 1795, 2705
PinAI ACCGGT 1 cut(s) 2218
PscI ACATGT 2 cut(s) 1104, 1979
PshAI GACNNNNGTC 1 cut(s) 972
PsiI TTATAA 2 cut(s) 923, 2172
Psp124BI GAGCTC 1 cut(s) 228
Psp1406I AACGTT 2 cut(s) 1060, 2703
Psp6I CCWGG 6 cut(s) 345, 700, 777, 1212, 1603, 1794
PspFI CCCAGC 1 cut(s) 2562
PspGI CCWGG 6 cut(s) 345, 700, 777, 1212, 1603, 1794
PspN4I GGNNCC 3 cut(s) 378, 699, 2793
PspPI GGNCC 6 cut(s) 698, 1022, 1163, 1216, 1786, 2792
PsrI GAACNNNNNNTAC 2 cut(s) 1784, 1816
PstNI CAGNNNCTG 3 cut(s) 1469, 1632, 1795
PsuI RGATCY 5 cut(s) 32, 376, 1309, 2056, 2338
RsaI GTAC 3 cut(s) 149, 527, 1203
RsaNI GTAC 3 cut(s) 148, 526, 1202
RseI CAYNNNNRTG 3 cut(s) 399, 554, 1951
SacI GAGCTC 1 cut(s) 228
SapI GCTCTTC 1 cut(s) 2916
Sau96I GGNCC 6 cut(s) 698, 1022, 1163, 1216, 1786, 2792
SduI GDGCHC 3 cut(s) 228, 1614, 3009
SexAI ACCWGGT 1 cut(s) 1603
SfaNI GCATC 4 cut(s) 924, 1542, 2507, 3005
SmaI CCCGGG 2 cut(s) 1615, 2989
SmiMI CAYNNNNRTG 3 cut(s) 399, 554, 1951
SmlI CTYRAG 3 cut(s) 289, 2044, 2546
SmoI CTYRAG 3 cut(s) 289, 2044, 2546
SseBI AGGCCT 1 cut(s) 1496
SsiI CCGC 4 cut(s) 1714, 1871, 2647, 2744
SspI AATATT 3 cut(s) 1587, 2167, 2571
SspMI CTAG 6 cut(s) 1364, 1439, 2114, 2186, 2495, 2711
SstI GAGCTC 1 cut(s) 228
StuI AGGCCT 1 cut(s) 1496
TaaI ACNGT 4 cut(s) 1424, 2121, 2373, 2968
TaiI ACGT 6 cut(s) 134, 972, 1063, 1659, 1966, 2706
TatI WGTACW 1 cut(s) 147
TauI GCSGC 3 cut(s) 1717, 2650, 2747
TscAI CASTG 5 cut(s) 904, 1470, 1761, 2739, 2973
TseFI GTSAC 7 cut(s) 413, 1465, 1599, 2282, 2802, 2850, 2934
TseI GCWGC 8 cut(s) 23, 26, 284, 473, 605, 1623, 1873, 2418
Tsp45I GTSAC 7 cut(s) 413, 1465, 1599, 2282, 2802, 2850, 2934
TspGWI ACGGA 2 cut(s) 2293, 2922
TspMI CCCGGG 2 cut(s) 1613, 2987
TspRI CASTG 5 cut(s) 904, 1470, 1761, 2739, 2973
Van91I CCANNNNNTGG 2 cut(s) 1795, 2705
VneI GTGCAC 1 cut(s) 3005
XbaI TCTAGA 2 cut(s) 2185, 2710
XceI RCATGY 2 cut(s) 1108, 1983
XmaI CCCGGG 2 cut(s) 1613, 2987
XmiI GTMKAC 3 cut(s) 128, 1092, 1419
XmnI GAANNNNTTC 2 cut(s) 672, 1148
XspI CTAG 6 cut(s) 1364, 1439, 2114, 2186, 2495, 2711
Zsp2I ATGCAT 2 cut(s) 1150, 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.