Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0005108

Physical Location & Seq

Genomic Coordinates Reverse (-)

3330648 .. 3332567

Gene Structure 1920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0023300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGTCCAAAGCTACCAGCCTGCATGCAAAATTTGGGAGCATTGAGTTGCTACTTGATGTTCCCAGAAGTTGTCTAGGCATAAGCAAAAGAAAATGGCATTCTGCTTTCCTCACCATATACTGCTCTAGAGCCTTCCTGTCTTCACCACCTTCTTCTCAACCCAAAGACACCAAAGCCACATTCTTATCGCGCACAGTCTCATACTCCATTGTTAGTGTTGAATCAGTTTCGGTGCCAGCCATTAATGGCTTCAAAGTTGATCAAAAAAACCTCACTACGCTAGTGAAGGAGAAAAATCTCAACCAGCTTCTGGAGCTGGGAGGGGTTGAAGAAGTGGCATCAGCTCTCAAAACTGATGCAGTGCACGGAATTAATCCTGATGATGCTGACGACATTGCCTCCAGGCATGAAGCATATGGTTTCAACACCTACAAGAAACCTCCAACGCAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACAATCCTAATCCTCTTGGGATGTGCTGCGCTTTCTCTTGGTTTCGGCATTAAAGAGCATGGATTGAAAGAAGGTTGGATTGACGGTGGAAGCATTTGTCTCGCGGTCATTCTGGTCATTTCTGTTTCAGCCATAAGCAACTACAGACAGAGCAGACAGTTTGACAAGCTGTCGAAAGTCAGCAACAATCTCCAGATTGAGGCTGTGAGAAATGGAAGGCGCCAACTGATTTCAATATTCGAAATTGTGGTGGGTGATGTCATCTGCTTGAAAATTGGAGATCAAGTTCCAGCTGATGGATTACTTCTAGAAGGCCACTCTTTATCAGTAGACGAATCAAGCATGACAGGGGAGAGCGACCATGTTGAGATTAGTGTCACTGAGAATCCTTTCTTGTTCTCTGGGACTAAAATAGCTGATGGTTATGGTCGCATGCTTGTCACATCGGTCGGGATGAACACAAATTGGGGTGAAATGATGAGCCAAATTAGCCAAGACACCGGTGAAAAGACACCCCTGCAAGCACGTCTAGACAAGCTAACTTCTTCGATAGGTAAAGTTGGTTTGGCAGTTGCTTTCTTTGTTCTTGTAGTCATGTTGGTCAGATACTTCACAGGAAACACCGAGGATGAGAATGGAAACAAAGAGTACAATGGCAGCAAGACCAAATCTGATGACATAATAAATGCTGTCATTGGGATTGTAGCAGCAGCAGTTACAATTGTTGTGGTAGCAATTCCAGAAGGTCTACCATTAGCTGTGACTCTCACTCTTGCATATTCAATGAAGAGAATGATGGTTGATAATGCAATGGTCCGGAAGCTCTCTGCTTGTGAGACCATGGGATCTGCTACAACAATTTGTACCGACAAAACAGGCACTCTGACCATGAACCAGATGAAGGTAACTAAGTTTTGGTTGGGGAAAGAATCTGTGGAAGAAGAAGCTTATTCATCTATTTCTCCTTACGTTCTCAACTTGATCCAAGAAGGGGTTTCTCTCAACACAACTGGTAGTGTGTACAGGCCTAGCTTGGATTCCGAAATTGAGATCTCTGGCAGTCCCACTGAAAAGGCTATTCTTTCATGGGCTGTACATGGGTCAAAGATGGATATGGAGAAAGTGGTGAAGAGTTGTAGCATTCTCTACGTTGAAGCCTTTAATTCGAAGAAGAAACATAGCGGAGTTCTGGTGAAGAGAAAGGCAGATAACTCAATCCATGTACACTGGAAAGGAGCAGCAGAGATGATACTAGCAATGTGCAAAAGCTACTACAACGCCACTGGAGTTGTTAAGGATATGGATGAGAATGAAAAAAGGAACTTTGAGCATATTATTCAAGGTATGGCAGCTAGCAGTCTCAGATGCATAGCATTTGCACACAAACAAGTTCCAGCAGAGGAGCAACTAAATGCAGACCAGAAAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

639

Amino Acids

69.66

Weight (kDa)

6.42

Isoelectric Point (pI)

32.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	106 - 175	2.5e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	231 - 326	5.8e-21	P-type ATPase actuator domain
Cation_ATPase	PF13246	489 - 632	1.7e-21	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005108)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19090 AT4G30130 AT4G30130 AT4G30130 AT4G30130
fragaria_vesca	FvH4_4g07580 FvH4_4g07580 FvH4_4g07580 FvH4_4g07580 FvH4_4g07580
malus_domestica	MD00G1185400.v1.1 MD13G1245700.v1.1 MD13G1245800.v1.1
prunus_persica	Prupe.1G079100_v2.0.a1 Prupe.1G079100_v2.0.a1
pyrus_communis	pycom16g21390
rosa_chinensis	RchiOBHm_Chr4g0400181
rosa_laevigata	RLG00000009206
rosa_multiflora	Rmu_sc0000037.1_g000021 Rmu_sc0011138.1_g000003 Rmu_sc0035893.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345130
rosa_rugosa	Rorug04G0023200 Rorug04G0023300 Rorug04G0023400
rosa_samantha	Rh4AG098700 Rh4BG097000 Rh4CG108200 Rh4DG093700
rosa_wichuraiana	Rw4G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	232, 708
AccB7I	CCANNNNNTGG	2 cut(s)	310, 785
AccI	GTMKAC	2 cut(s)	819, 1237
AccII	CGCG	2 cut(s)	190, 593
AccIII	TCCGGA	1 cut(s)	1305
AciI	CCGC	2 cut(s)	593, 1671
AclWI	GGATC	2 cut(s)	1342, 1465
AcsI	RAATTY	1 cut(s)	29
AcyI	GRCGYC	1 cut(s)	709
AfaI	GTAC	5 cut(s)	1139, 1354, 1511, 1584, 1713
AfiI	CCNNNNNNNGG	6 cut(s)	310, 449, 688, 785, 1390, 1480
AgeI	ACCGGT	1 cut(s)	989
AhdI	GACNNNNNGTC	1 cut(s)	658
AjiI	CACGTC	1 cut(s)	1016
AjnI	CCWGG	1 cut(s)	401
AjuI	GAANNNNNNNTTGG	2 cut(s)	164, 196
AloI	GAACNNNNNNTCC	2 cut(s)	759, 791
Alw21I	GWGCWC	1 cut(s)	366
Alw26I	GTCTC	4 cut(s)	202, 593, 1319, 1853
Alw44I	GTGCAC	1 cut(s)	362
AlwI	GGATC	2 cut(s)	1342, 1465
AlwNI	CAGNNNCTG	1 cut(s)	310
Aor13HI	TCCGGA	1 cut(s)	1305
AoxI	GGCC	2 cut(s)	802, 1514
ApaLI	GTGCAC	1 cut(s)	362
ApeKI	GCWGC	6 cut(s)	515, 1146, 1196, 1199, 1727, 1838
ApoI	RAATTY	1 cut(s)	29
AseI	ATTAAT	2 cut(s)	243, 372
AsiGI	ACCGGT	1 cut(s)	989
Asp700I	GAANNNNTTC	1 cut(s)	878
AspLEI	GCGC	3 cut(s)	192, 520, 711
AspS9I	GGNCC	1 cut(s)	1303
AsuHPI	GGTGA	7 cut(s)	103, 135, 755, 971, 1004, 1627, 1693
AsuII	TTCGAA	2 cut(s)	729, 1655
AsuNHI	GCTAGC	1 cut(s)	1841
AvaII	GGWCC	1 cut(s)	1303
BaeGI	GKGCMC	1 cut(s)	366
BanI	GGYRCC	2 cut(s)	232, 708
BbsI	GAAGAC	1 cut(s)	132
Bbv12I	GWGCWC	1 cut(s)	366
BbvI	GCAGC	6 cut(s)	502, 1158, 1208, 1211, 1739, 1850
BccI	CCATC	4 cut(s)	779, 902, 1279, 1591
BcgI	CGANNNNNNTGC	2 cut(s)	571, 605
BciT130I	CCWGG	1 cut(s)	403
BclI	TGATCA	1 cut(s)	259
BcoDI	GTCTC	4 cut(s)	202, 593, 1319, 1853
BfaI	CTAG	8 cut(s)	74, 126, 281, 797, 1019, 1518, 1742, 1842
BfmI	CTRYAG	1 cut(s)	631
BfoI	RGCGCY	1 cut(s)	712
BglII	AGATCT	1 cut(s)	1539
BisI	GCNGC	6 cut(s)	516, 1147, 1197, 1200, 1728, 1839
BlsI	GCNGC	6 cut(s)	517, 1148, 1198, 1201, 1729, 1840
Bme1390I	CCNGG	1 cut(s)	403
Bme18I	GGWCC	1 cut(s)	1303
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmgBI	CACGTC	1 cut(s)	1016
BmgT120I	GGNCC	1 cut(s)	1303
BmiI	GGNNCC	2 cut(s)	234, 710
BmrFI	CCNGG	1 cut(s)	403
BmsI	GCATC	4 cut(s)	346, 347, 373, 1844
BmtI	GCTAGC	1 cut(s)	1845
BpiI	GAAGAC	1 cut(s)	132
BpmI	CTGGAG	4 cut(s)	332, 385, 665, 1794
Bpu14I	TTCGAA	2 cut(s)	729, 1655
BsaHI	GRCGYC	1 cut(s)	709
BsaI	GGTCTC	1 cut(s)	1319
BsaJI	CCNNGG	2 cut(s)	1113, 1329
BsaWI	WCCGGW	2 cut(s)	989, 1305
BsaXI	ACNNNNNCTCC	6 cut(s)	383, 413, 759, 789, 1665, 1695
Bsc4I	CCNNNNNNNGG	6 cut(s)	310, 449, 688, 785, 1390, 1480
Bse118I	RCCGGY	1 cut(s)	989
Bse1I	ACTGG	3 cut(s)	1504, 1721, 1777
Bse3DI	GCAATG	3 cut(s)	393, 1305, 1752
BseAI	TCCGGA	1 cut(s)	1305
BseBI	CCWGG	1 cut(s)	403
BseDI	CCNNGG	2 cut(s)	1113, 1329
BseGI	GGATG	4 cut(s)	515, 948, 1123, 1798
BseLI	CCNNNNNNNGG	6 cut(s)	310, 449, 688, 785, 1390, 1480
BseMI	GCAATG	3 cut(s)	393, 1305, 1752
BseMII	CTCAG	2 cut(s)	861, 1864
BseNI	ACTGG	3 cut(s)	1504, 1721, 1777
BseRI	GAGGAG	1 cut(s)	1904
BseSI	GKGCMC	1 cut(s)	366
BseXI	GCAGC	6 cut(s)	502, 1158, 1208, 1211, 1739, 1850
BseYI	CCCAGC	1 cut(s)	316
Bsh1236I	CGCG	2 cut(s)	190, 593
Bsh1285I	CGRYCG	1 cut(s)	939
BshFI	GGCC	2 cut(s)	804, 1516
BshNI	GGYRCC	2 cut(s)	232, 708
BshTI	ACCGGT	1 cut(s)	989
BsiEI	CGRYCG	1 cut(s)	939
BsiHKAI	GWGCWC	1 cut(s)	366
BsiSI	CCGG	2 cut(s)	990, 1306
BslFI	GGGAC	2 cut(s)	907, 1536
BslI	CCNNNNNNNGG	6 cut(s)	310, 449, 688, 785, 1390, 1480
BsmAI	GTCTC	4 cut(s)	202, 593, 1319, 1853
BsmFI	GGGAC	2 cut(s)	907, 1536
BsmI	GAATGC	2 cut(s)	97, 1629
BsnI	GGCC	2 cut(s)	804, 1516
Bso31I	GGTCTC	1 cut(s)	1319
Bsp119I	TTCGAA	2 cut(s)	729, 1655
Bsp1286I	GDGCHC	1 cut(s)	366
Bsp13I	TCCGGA	1 cut(s)	1305
Bsp1407I	TGTACA	3 cut(s)	1509, 1582, 1711
Bsp143I	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
Bsp19I	CCATGG	1 cut(s)	1329
BspACI	CCGC	2 cut(s)	593, 1671
BspANI	GGCC	2 cut(s)	804, 1516
BspCNI	CTCAG	2 cut(s)	862, 1863
BspEI	TCCGGA	1 cut(s)	1305
BspFNI	CGCG	2 cut(s)	190, 593
BspLI	GGNNCC	2 cut(s)	234, 710
BspOI	GCTAGC	1 cut(s)	1845
BspPI	GGATC	2 cut(s)	1342, 1465
BspT104I	TTCGAA	2 cut(s)	729, 1655
BspT107I	GGYRCC	2 cut(s)	232, 708
BspTNI	GGTCTC	1 cut(s)	1319
BsrDI	GCAATG	3 cut(s)	393, 1305, 1752
BsrFI	RCCGGY	1 cut(s)	989
BsrGI	TGTACA	3 cut(s)	1509, 1582, 1711
BsrI	ACTGG	3 cut(s)	1504, 1721, 1777
BssAI	RCCGGY	1 cut(s)	989
BssECI	CCNNGG	2 cut(s)	1113, 1329
BssMI	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
BssNI	GRCGYC	1 cut(s)	709
BssT1I	CCWWGG	1 cut(s)	1329
Bst2UI	CCWGG	1 cut(s)	403
Bst4CI	ACNGT	3 cut(s)	196, 575, 648
Bst6I	CTCTTC	3 cut(s)	1271, 1613, 1679
BstACI	GRCGYC	1 cut(s)	709
BstAUI	TGTACA	3 cut(s)	1509, 1582, 1711
BstBI	TTCGAA	2 cut(s)	729, 1655
BstC8I	GCNNGC	6 cut(s)	20, 24, 237, 923, 1011, 1843
BstDEI	CTNAG	3 cut(s)	870, 1398, 1850
BstDSI	CCRYGG	1 cut(s)	1329
BstF5I	GGATG	4 cut(s)	515, 948, 1123, 1798
BstFNI	CGCG	2 cut(s)	190, 593
BstH2I	RGCGCY	1 cut(s)	712
BstHHI	GCGC	3 cut(s)	192, 520, 711
BstKTI	GATC	5 cut(s)	262, 772, 1337, 1473, 1542
BstMAI	GTCTC	4 cut(s)	202, 593, 1319, 1853
BstMBI	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
BstMCI	CGRYCG	1 cut(s)	939
BstMWI	GCNNNNNNNGC	2 cut(s)	313, 978
BstNI	CCWGG	1 cut(s)	403
BstNSI	RCATGY	2 cut(s)	26, 925
BstSCI	CCNGG	1 cut(s)	401
BstSFI	CTRYAG	1 cut(s)	631
BstSLI	GKGCMC	1 cut(s)	366
BstUI	CGCG	2 cut(s)	190, 593
BstV1I	GCAGC	6 cut(s)	502, 1158, 1208, 1211, 1739, 1850
BstV2I	GAAGAC	1 cut(s)	132
BstX2I	RGATCY	2 cut(s)	1334, 1539
BstYI	RGATCY	2 cut(s)	1334, 1539
BsuRI	GGCC	2 cut(s)	804, 1516
BtgI	CCRYGG	1 cut(s)	1329
BtrI	CACGTC	1 cut(s)	1016
BtsCI	GGATG	4 cut(s)	515, 948, 1123, 1798
BtsI	GCAGTG	1 cut(s)	366
BtsIMutI	CAGTG	5 cut(s)	366, 867, 1554, 1714, 1770
Cac8I	GCNNGC	6 cut(s)	20, 24, 237, 923, 1011, 1843
CaiI	CAGNNNCTG	1 cut(s)	310
CfoI	GCGC	3 cut(s)	192, 520, 711
Cfr10I	RCCGGY	1 cut(s)	989
Cfr13I	GGNCC	1 cut(s)	1303
Csp6I	GTAC	5 cut(s)	1138, 1353, 1510, 1583, 1712
CspAI	ACCGGT	1 cut(s)	989
CspCI	CAANNNNNGTGG	4 cut(s)	1197, 1232, 1759, 1794
CviQI	GTAC	5 cut(s)	1138, 1353, 1510, 1583, 1712
DdeI	CTNAG	3 cut(s)	870, 1398, 1850
DinI	GGCGCC	1 cut(s)	710
DpnI	GATC	5 cut(s)	261, 771, 1336, 1472, 1541
DpnII	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
DriI	GACNNNNNGTC	1 cut(s)	658
Eam1104I	CTCTTC	3 cut(s)	1271, 1613, 1679
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	3 cut(s)	1271, 1613, 1679
Eco130I	CCWWGG	1 cut(s)	1329
Eco147I	AGGCCT	1 cut(s)	1516
Eco31I	GGTCTC	1 cut(s)	1319
Eco47I	GGWCC	1 cut(s)	1303
EcoRII	CCWGG	1 cut(s)	401
EcoT14I	CCWWGG	1 cut(s)	1329
EcoT22I	ATGCAT	1 cut(s)	1859
EgeI	GGCGCC	1 cut(s)	710
EheI	GGCGCC	1 cut(s)	710
ErhI	CCWWGG	1 cut(s)	1329
FaqI	GGGAC	2 cut(s)	907, 1536
FauNDI	CATATG	1 cut(s)	415
FbaI	TGATCA	1 cut(s)	259
FblI	GTMKAC	2 cut(s)	819, 1237
Fnu4HI	GCNGC	6 cut(s)	516, 1147, 1197, 1200, 1728, 1839
FokI	GGATG	4 cut(s)	522, 955, 1130, 1805
Fsp4HI	GCNGC	6 cut(s)	516, 1147, 1197, 1200, 1728, 1839
FspBI	CTAG	8 cut(s)	74, 126, 281, 797, 1019, 1518, 1742, 1842
GlaI	GCGC	3 cut(s)	191, 519, 710
GluI	GCNGC	6 cut(s)	516, 1147, 1197, 1200, 1728, 1839
GsaI	CCCAGC	1 cut(s)	320
GsuI	CTGGAG	4 cut(s)	332, 385, 665, 1794
HaeII	RGCGCY	1 cut(s)	712
HaeIII	GGCC	2 cut(s)	804, 1516
HapII	CCGG	2 cut(s)	990, 1306
HhaI	GCGC	3 cut(s)	192, 520, 711
Hin1I	GRCGYC	1 cut(s)	709
Hin6I	GCGC	3 cut(s)	190, 518, 709
HinP1I	GCGC	3 cut(s)	190, 518, 709
HindIII	AAGCTT	1 cut(s)	1434
HinfI	GANTC	7 cut(s)	221, 453, 824, 874, 1252, 1418, 1526
HpaII	CCGG	2 cut(s)	990, 1306
HphI	GGTGA	7 cut(s)	103, 135, 755, 971, 1004, 1627, 1693
Hpy166II	GTNNAC	5 cut(s)	364, 820, 1238, 1510, 1714
Hpy188I	TCNGA	5 cut(s)	1094, 1162, 1374, 1531, 1853
Hpy188III	TCNNGA	9 cut(s)	126, 311, 377, 682, 797, 940, 1019, 1229, 1306
Hpy8I	GTNNAC	5 cut(s)	364, 820, 1238, 1510, 1714
HpyCH4III	ACNGT	3 cut(s)	196, 575, 648
HpyCH4IV	ACGT	3 cut(s)	1015, 1458, 1638
HpyF10VI	GCNNNNNNNGC	2 cut(s)	313, 978
HpyF3I	CTNAG	3 cut(s)	870, 1398, 1850
HpySE526I	ACGT	3 cut(s)	1015, 1458, 1638
Hsp92I	GRCGYC	1 cut(s)	709
HspAI	GCGC	3 cut(s)	190, 518, 709
KasI	GGCGCC	1 cut(s)	708
Kpn2I	TCCGGA	1 cut(s)	1305
Ksp22I	TGATCA	1 cut(s)	259
Kzo9I	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
LmnI	GCTCC	4 cut(s)	36, 313, 1724, 1891
Lsp1109I	GCAGC	6 cut(s)	502, 1158, 1208, 1211, 1739, 1850
LweI	GCATC	4 cut(s)	346, 347, 373, 1844
MaeI	CTAG	8 cut(s)	74, 126, 281, 797, 1019, 1518, 1742, 1842
MaeII	ACGT	3 cut(s)	1015, 1458, 1638
MaeIII	GTNAC	5 cut(s)	865, 928, 1204, 1249, 1393
MalI	GATC	5 cut(s)	261, 771, 1336, 1472, 1541
MboI	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
MfeI	CAATTG	1 cut(s)	1209
MflI	RGATCY	2 cut(s)	1334, 1539
MhlI	GDGCHC	1 cut(s)	366
Mly113I	GGCGCC	1 cut(s)	709
MlyI	GAGTC	1 cut(s)	1246
MmeI	TCCRAC	2 cut(s)	467, 545
Mph1103I	ATGCAT	1 cut(s)	1859
MroI	TCCGGA	1 cut(s)	1305
MroXI	GAANNNNTTC	1 cut(s)	878
MseI	TTAA	5 cut(s)	243, 372, 540, 1650, 1782
MspA1I	CMGCKG	1 cut(s)	782
MspI	CCGG	2 cut(s)	990, 1306
MspR9I	CCNGG	1 cut(s)	403
MunI	CAATTG	1 cut(s)	1209
Mva1269I	GAATGC	2 cut(s)	97, 1629
MvaI	CCWGG	1 cut(s)	403
MvnI	CGCG	2 cut(s)	190, 593
MwoI	GCNNNNNNNGC	2 cut(s)	313, 978
NarI	GGCGCC	1 cut(s)	709
NcoI	CCATGG	1 cut(s)	1329
NdeI	CATATG	1 cut(s)	415
NdeII	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
NheI	GCTAGC	1 cut(s)	1841
NlaIV	GGNNCC	2 cut(s)	234, 710
NmuCI	GTSAC	3 cut(s)	865, 928, 1249
NsiI	ATGCAT	1 cut(s)	1859
NspI	RCATGY	2 cut(s)	26, 925
NspV	TTCGAA	2 cut(s)	729, 1655
PaeI	GCATGC	2 cut(s)	26, 925
PceI	AGGCCT	1 cut(s)	1516
PctI	GAATGC	2 cut(s)	97, 1629
PdmI	GAANNNNTTC	1 cut(s)	878
PfeI	GAWTC	6 cut(s)	221, 453, 824, 874, 1418, 1526
PflMI	CCANNNNNTGG	2 cut(s)	310, 785
PinAI	ACCGGT	1 cut(s)	989
PkrI	GCNGC	6 cut(s)	517, 1148, 1198, 1201, 1729, 1840
PleI	GAGTC	1 cut(s)	1246
PluTI	GGCGCC	1 cut(s)	712
PpsI	GAGTC	1 cut(s)	1246
PshBI	ATTAAT	2 cut(s)	243, 372
Psp6I	CCWGG	1 cut(s)	401
PspFI	CCCAGC	1 cut(s)	316
PspGI	CCWGG	1 cut(s)	401
PspN4I	GGNNCC	2 cut(s)	234, 710
PspPI	GGNCC	1 cut(s)	1303
PstNI	CAGNNNCTG	1 cut(s)	310
PsuI	RGATCY	2 cut(s)	1334, 1539
PvuII	CAGCTG	1 cut(s)	782
RsaI	GTAC	5 cut(s)	1139, 1354, 1511, 1584, 1713
RsaNI	GTAC	5 cut(s)	1138, 1353, 1510, 1583, 1712
SaqAI	TTAA	5 cut(s)	243, 372, 540, 1650, 1782
SatI	GCNGC	6 cut(s)	516, 1147, 1197, 1200, 1728, 1839
Sau3AI	GATC	5 cut(s)	259, 769, 1334, 1470, 1539
Sau96I	GGNCC	1 cut(s)	1303
SchI	GAGTC	1 cut(s)	1246
ScrFI	CCNGG	1 cut(s)	403
SduI	GDGCHC	1 cut(s)	366
SfaNI	GCATC	4 cut(s)	346, 347, 373, 1844
SfcI	CTRYAG	1 cut(s)	631
SfoI	GGCGCC	1 cut(s)	710
SfuI	TTCGAA	2 cut(s)	729, 1655
SgrAI	CRCCGGYG	1 cut(s)	989
SinI	GGWCC	1 cut(s)	1303
SphI	GCATGC	2 cut(s)	26, 925
SseBI	AGGCCT	1 cut(s)	1516
SsiI	CCGC	2 cut(s)	593, 1671
SspDI	GGCGCC	1 cut(s)	708
SspI	AATATT	1 cut(s)	726
SspMI	CTAG	8 cut(s)	74, 126, 281, 797, 1019, 1518, 1742, 1842
StuI	AGGCCT	1 cut(s)	1516
StyD4I	CCNGG	1 cut(s)	401
StyI	CCWWGG	1 cut(s)	1329
TaaI	ACNGT	3 cut(s)	196, 575, 648
TaiI	ACGT	3 cut(s)	1018, 1461, 1641
TaqI	TCGA	4 cut(s)	662, 729, 1037, 1655
TaqII	GACCGA	1 cut(s)	925
TatI	WGTACW	4 cut(s)	1137, 1509, 1582, 1711
TfiI	GAWTC	6 cut(s)	221, 453, 824, 874, 1418, 1526
Tru1I	TTAA	5 cut(s)	243, 372, 540, 1650, 1782
Tru9I	TTAA	5 cut(s)	243, 372, 540, 1650, 1782
TscAI	CASTG	5 cut(s)	366, 874, 1561, 1721, 1777
TseFI	GTSAC	3 cut(s)	865, 928, 1249
TseI	GCWGC	6 cut(s)	515, 1146, 1196, 1199, 1727, 1838
Tsp45I	GTSAC	3 cut(s)	865, 928, 1249
TspDTI	ATGAA	8 cut(s)	423, 959, 1289, 1394, 1403, 1431, 1563, 1815
TspGWI	ACGGA	1 cut(s)	381
TspRI	CASTG	5 cut(s)	366, 874, 1561, 1721, 1777
Van91I	CCANNNNNTGG	2 cut(s)	310, 785
VneI	GTGCAC	1 cut(s)	362
VpaK11BI	GGWCC	1 cut(s)	1303
VspI	ATTAAT	2 cut(s)	243, 372
XapI	RAATTY	1 cut(s)	29
XbaI	TCTAGA	3 cut(s)	125, 796, 1018
XceI	RCATGY	2 cut(s)	26, 925
XmiI	GTMKAC	2 cut(s)	819, 1237
XmnI	GAANNNNTTC	1 cut(s)	878
XspI	CTAG	8 cut(s)	74, 126, 281, 797, 1019, 1518, 1742, 1842
Zsp2I	ATGCAT	1 cut(s)	1859

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.