Rh4DG093700

Protein of unknown function (DUF630)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
14089104 .. 14094233
5130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG093700.1

Sequence Viewer

Length: 2037 bp
ATGGGATGTTCTACATCTAAGCTAGATGATGAAGAAGCAGTTCAACTTTGTAAAGATCGAAGGAGATTTATTAAACAGGCTCTCGAACAAAGAGCACGATTTGCATCTGGACACTTGGCCTATATACAGTCCCTGAAAAGAGTTTCAGCTGCTCTTCGTGACTATATTGAAGTGGATGAGCCTCATGTGTTCTCATTAGAGTCCTTCATAACCCCACCATTCACACCAATAAAGAAAACAAGTCCTGGTTTTATCTGTGACAGTACACCTAAGATCAGGAGGATTTCATCAAAATCCTTCTCACCTGCACAAACCCAATCCGAACCCCATTCATCTGTGAAGGTACATTACCTAAGATCAGGAGGAAATCCGGCAGTGTCAGTGGAAGAGAGACCACCTCAATCATCGGAGACAGTCAGTGGAAGTCCTGGTTTTATCTGTGACAGTACACCTAAGATCAGGAGGATTTCATCAAAATCCTTCTCACCTGCACAAACCCAATCCGAACCCCATTCATCTGTGAAGGTACATTGCCTAAGATCAGGAGGAAATCCGGCAGTGTCAGTGGAAGAGAGACCACCTCAATCATCGGAGACAGTCAGTGGAAGTCCTGGTTTTATCTGTGACAGTACACCTAAGATCAGGAGGATTTCATCAAAATCCTTCTCACCTGCACAAACCCAATCCGAACCCCATTCATCTGTGAAGGTACATTGCCTAAGATCAGGAGGAAATCCGGCAGTGTCAGTGGAAGAGAGACCCCCTCAATCACCAGAGACGGTCAGAGTAGAAACTTACTCTCCAGTACACCAGTTTGGAATGGATGGTTTCTTTGCAATGCAATCTTCGCCAATGAATTCTTCTTCATTCTTCTCCTATTCCCCTAACAACAGGCCCAATATCCCTCCACCTTCACCTCAAAACTCTCAATGGGATTTTTTCTGGAACCCATTTTCATCATTAGATTACTATGGTTATCCCACTCCATCTAGTATTGATCAGACAGTCATGGATGATGAGAATAGAGGACTAAGGCAGGTCAGAGAAGAAGAAGGGATCCCTGACTTGGAAGAAATTGAAACTGAGCAAGAGGATTGCTATGATGAGGCAAATGTAAGACAAGAAAGGGATAAAATGGATCTAAACTACAACAGAGAAGAAGTTATTGTTGAAGATGTTGATGATGAGGAGGATGAGGATGAGGAGACGGTCAGCGGAAACGAAACTGAGCATGAAGCAGAAATACCCTCCCATGATCATATTACTATAGAGGTGCGAGCTCAGACTGCAAGACAAGTTGAAACTAGTAATCAAGGAACGGCAGTTGTTGATCGAGAGGCCAAGGAAGAAACACCAGGATTTACTGTTTATGTAAACCGAAGGCCAACGAGTATGGCAGAAGTTATCAAGGATTTAGAAGCTCAGTTTGTGATCGTTTGCAATGCAGCCAATCAGGTCTCGGCGTTGTTAGAGGCCAACAGAGAGCAGTACTCATCAACCTCCAATGAACTCTCAGCCATGAAAATGCTGAACCCAGTAGCTTTATTTCGCTCAGCATCCTCGTCTCGCTCAGCCTCATCCAGATTTTTAGTGACTTCTTCCTGCTCCAAAGATGAAGGTTATGAAAGCAGCAGTGACTTCTCAGAGGAGCCCTGCATGTTTTCAGGTAGTCACCAATCAACATTGGACAGATTGTATGCTTGGGAGAAGAAACTCTATGAGGAAGTCAAGTCTGGAGAAAAGGTTCGGATGACATATGACAAGAAATTAAAGCAACTCCGGAACCAAGATGTAAAAGGCGATGACCAATCTGCTCTAGAAAAAACAAGGGTATCCATTAGAGATCTGCATACGCAGATGAAGGTTTCGATACACTCAGTTGAAGCTATTTCAAAGAGAATTGAATCCTTAAGGGATGAAGAACTGCAGCCTCAACTTTCAGAATTGGTGCAAGGGTACAACACATTAACACAATATCACTTGGCTTTAGCACTCATTAACAACACATATAACACACAATGTGCAACGCAAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

678

Amino Acids

76.01

Weight (kDa)

5.14

Isoelectric Point (pI)

69.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 58 1.7e-26 Protein of unknown function (DUF630)
DUF632 PF04782 465 - 653 8.3e-63 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 313, 496, 679
Acc36I ACCTGC 4 cut(s) 313, 496, 679, 1027
AccIII TCCGGA 1 cut(s) 1779
AciI CCGC 1 cut(s) 1215
AclWI GGATC 3 cut(s) 1051, 1064, 1146
AcsI RAATTY 1 cut(s) 856
AdeI CACNNNGTG 1 cut(s) 2021
AfaI GTAC 9 cut(s) 265, 345, 448, 528, 631, 711, 807, 1490, 1958
AfiI CCNNNNNNNGG 1 cut(s) 1066
AflII CTTAAG 1 cut(s) 1909
AgsI TTSAA 8 cut(s) 44, 170, 1079, 1172, 1301, 1883, 1893, 1904
AhlI ACTAGT 1 cut(s) 1304
AjnI CCWGG 4 cut(s) 244, 427, 610, 1354
AjuI GAANNNNNNNTTGG 2 cut(s) 844, 876
AloI GAACNNNNNNTCC 2 cut(s) 1728, 1760
AluBI AGCT 6 cut(s) 22, 149, 1280, 1421, 1541, 1886
AluI AGCT 6 cut(s) 22, 149, 1280, 1421, 1541, 1886
Alw21I GWGCWC 2 cut(s) 97, 1282
Alw26I GTCTC 9 cut(s) 385, 404, 568, 587, 751, 770, 1199, 1462, 1569
AlwI GGATC 3 cut(s) 1051, 1064, 1146
AlwNI CAGNNNCTG 1 cut(s) 133
Aor13HI TCCGGA 1 cut(s) 1779
AoxI GGCC 5 cut(s) 117, 893, 1338, 1382, 1473
ApeKI GCWGC 4 cut(s) 149, 1445, 1629, 1927
ApoI RAATTY 1 cut(s) 856
Asp700I GAANNNNTTC 2 cut(s) 39, 1743
AspS9I GGNCC 1 cut(s) 894
AsuHPI GGTGA 6 cut(s) 294, 477, 660, 762, 906, 1664
BaeI ACNNNNGTAYC 2 cut(s) 1815, 1848
BamHI GGATCC 1 cut(s) 1056
BanII GRGCYC 2 cut(s) 1282, 1653
BarI GAAGNNNNNNTAC 4 cut(s) 332, 364, 1227, 1259
Bbv12I GWGCWC 2 cut(s) 97, 1282
BbvI GCAGC 4 cut(s) 136, 1457, 1641, 1939
BccI CCATC 2 cut(s) 818, 994
BceAI ACGGC 1 cut(s) 1335
BciT130I CCWGG 4 cut(s) 246, 429, 612, 1356
BciVI GTATCC 1 cut(s) 1843
BclI TGATCA 2 cut(s) 997, 1255
BcoDI GTCTC 9 cut(s) 385, 404, 568, 587, 751, 770, 1199, 1462, 1569
BcuI ACTAGT 1 cut(s) 1304
BfaI CTAG 4 cut(s) 23, 990, 1305, 1817
BfmI CTRYAG 2 cut(s) 1266, 1925
BfrI CTTAAG 1 cut(s) 1909
BfuAI ACCTGC 4 cut(s) 313, 496, 679, 1027
BfuI GTATCC 1 cut(s) 1843
BglII AGATCT 1 cut(s) 1843
BisI GCNGC 4 cut(s) 150, 1446, 1630, 1928
BlpI GCTNAGC 2 cut(s) 1552, 1570
BlsI GCNGC 4 cut(s) 151, 1447, 1631, 1929
BmcAI AGTACT 1 cut(s) 1490
Bme1390I CCNGG 4 cut(s) 246, 429, 612, 1356
BmgT120I GGNCC 1 cut(s) 894
BmiI GGNNCC 4 cut(s) 947, 1058, 1650, 1784
BmrFI CCNGG 4 cut(s) 246, 429, 612, 1356
BmrI ACTGGG 1 cut(s) 1529
BmsI GCATC 2 cut(s) 113, 1565
BmuI ACTGGG 1 cut(s) 1529
BplI GAGNNNNNCTC 8 cut(s) 382, 414, 565, 597, 748, 780, 1475, 1507
BpmI CTGGAG 2 cut(s) 786, 1755
Bpu1102I GCTNAGC 2 cut(s) 1552, 1570
BsaBI GATNNNNATC 1 cut(s) 103
BsaI GGTCTC 4 cut(s) 385, 568, 751, 1462
BsaJI CCNNGG 1 cut(s) 1341
BsaWI WCCGGW 1 cut(s) 1779
BsaXI ACNNNNNCTCC 4 cut(s) 784, 814, 1728, 1758
Bsc4I CCNNNNNNNGG 1 cut(s) 1066
Bse1I ACTGG 3 cut(s) 803, 811, 1535
Bse3DI GCAATG 4 cut(s) 529, 712, 843, 1447
Bse8I GATNNNNATC 1 cut(s) 103
BseAI TCCGGA 1 cut(s) 1779
BseBI CCWGG 4 cut(s) 246, 429, 612, 1356
BseDI CCNNGG 1 cut(s) 1341
BseJI GATNNNNATC 1 cut(s) 103
BseLI CCNNNNNNNGG 1 cut(s) 1066
BseMI GCAATG 4 cut(s) 529, 712, 843, 1447
BseMII CTCAG 9 cut(s) 1074, 1218, 1295, 1436, 1527, 1566, 1584, 1656, 1890
BseNI ACTGG 3 cut(s) 803, 811, 1535
BseRI GAGGAG 3 cut(s) 1202, 1217, 1661
BseXI GCAGC 4 cut(s) 136, 1457, 1641, 1939
BsgI GTGCAG 3 cut(s) 291, 474, 657
BshFI GGCC 5 cut(s) 119, 895, 1340, 1384, 1475
BsiHKAI GWGCWC 2 cut(s) 97, 1282
BsiSI CCGG 4 cut(s) 371, 554, 737, 1780
BslFI GGGAC 1 cut(s) 115
BslI CCNNNNNNNGG 1 cut(s) 1066
BsmAI GTCTC 9 cut(s) 385, 404, 568, 587, 751, 770, 1199, 1462, 1569
BsmBI CGTCTC 3 cut(s) 770, 1199, 1569
BsmFI GGGAC 1 cut(s) 115
BsnI GGCC 5 cut(s) 119, 895, 1340, 1384, 1475
Bso31I GGTCTC 4 cut(s) 385, 568, 751, 1462
Bsp1286I GDGCHC 3 cut(s) 97, 1282, 1653
Bsp13I TCCGGA 1 cut(s) 1779
Bsp1720I GCTNAGC 2 cut(s) 1552, 1570
BspACI CCGC 1 cut(s) 1215
BspANI GGCC 5 cut(s) 119, 895, 1340, 1384, 1475
BspCNI CTCAG 9 cut(s) 1075, 1219, 1294, 1435, 1526, 1565, 1583, 1655, 1889
BspEI TCCGGA 1 cut(s) 1779
BspLI GGNNCC 4 cut(s) 947, 1058, 1650, 1784
BspMAI CTGCAG 1 cut(s) 1929
BspMI ACCTGC 4 cut(s) 313, 496, 679, 1027
BspPI GGATC 3 cut(s) 1051, 1064, 1146
BspQI GCTCTTC 1 cut(s) 159
BspTI CTTAAG 1 cut(s) 1909
BspTNI GGTCTC 4 cut(s) 385, 568, 751, 1462
BsrDI GCAATG 4 cut(s) 529, 712, 843, 1447
BsrI ACTGG 3 cut(s) 803, 811, 1535
BssECI CCNNGG 1 cut(s) 1341
BssT1I CCWWGG 1 cut(s) 1341
Bst2UI CCWGG 4 cut(s) 246, 429, 612, 1356
Bst6I CTCTTC 4 cut(s) 159, 381, 564, 747
BstAFI CTTAAG 1 cut(s) 1909
BstAPI GCANNNNNTGC 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 1278
BstMAI GTCTC 9 cut(s) 385, 404, 568, 587, 751, 770, 1199, 1462, 1569
BstMWI GCNNNNNNNGC 3 cut(s) 101, 847, 1286
BstNI CCWGG 4 cut(s) 246, 429, 612, 1356
BstNSI RCATGY 1 cut(s) 1660
BstSCI CCNGG 4 cut(s) 244, 427, 610, 1354
BstSFI CTRYAG 2 cut(s) 1266, 1925
BstV1I GCAGC 4 cut(s) 136, 1457, 1641, 1939
BstX2I RGATCY 3 cut(s) 1056, 1138, 1843
BstYI RGATCY 3 cut(s) 1056, 1138, 1843
BsuI GTATCC 1 cut(s) 1843
BsuRI GGCC 5 cut(s) 119, 895, 1340, 1384, 1475
BtgZI GCGATG 1 cut(s) 1815
BtsI GCAGTG 4 cut(s) 381, 564, 747, 1639
BtsIMutI CAGTG 9 cut(s) 381, 387, 424, 564, 570, 607, 747, 753, 1639
BveI ACCTGC 4 cut(s) 313, 496, 679, 1027
Cac8I GCNNGC 1 cut(s) 1278
CaiI CAGNNNCTG 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 894
Csp6I GTAC 9 cut(s) 264, 344, 447, 527, 630, 710, 806, 1489, 1957
CviAII CATG 6 cut(s) 185, 1009, 1232, 1253, 1519, 1657
CviQI GTAC 9 cut(s) 264, 344, 447, 527, 630, 710, 806, 1489, 1957
DraIII CACNNNGTG 1 cut(s) 2021
Eam1104I CTCTTC 4 cut(s) 159, 381, 564, 747
EarI CTCTTC 4 cut(s) 159, 381, 564, 747
Ecl136II GAGCTC 1 cut(s) 1280
Eco130I CCWWGG 1 cut(s) 1341
Eco24I GRGCYC 2 cut(s) 1282, 1653
Eco31I GGTCTC 4 cut(s) 385, 568, 751, 1462
Eco53kI GAGCTC 1 cut(s) 1280
EcoICRI GAGCTC 1 cut(s) 1280
EcoRI GAATTC 1 cut(s) 856
EcoRII CCWGG 4 cut(s) 244, 427, 610, 1354
EcoT14I CCWWGG 1 cut(s) 1341
EcoT38I GRGCYC 2 cut(s) 1282, 1653
ErhI CCWWGG 1 cut(s) 1341
Esp3I CGTCTC 3 cut(s) 770, 1199, 1569
FaeI CATG 6 cut(s) 188, 1012, 1235, 1256, 1522, 1660
FaqI GGGAC 1 cut(s) 115
FatI CATG 6 cut(s) 184, 1008, 1231, 1252, 1518, 1656
FauNDI CATATG 1 cut(s) 1756
FbaI TGATCA 2 cut(s) 997, 1255
Fnu4HI GCNGC 4 cut(s) 150, 1446, 1630, 1928
FriOI GRGCYC 2 cut(s) 1282, 1653
Fsp4HI GCNGC 4 cut(s) 150, 1446, 1630, 1928
FspBI CTAG 4 cut(s) 23, 990, 1305, 1817
GluI GCNGC 4 cut(s) 150, 1446, 1630, 1928
GsuI CTGGAG 2 cut(s) 786, 1755
HaeIII GGCC 5 cut(s) 119, 895, 1340, 1384, 1475
HapII CCGG 4 cut(s) 371, 554, 737, 1780
Hin1II CATG 6 cut(s) 188, 1012, 1235, 1256, 1522, 1660
HinfI GANTC 2 cut(s) 200, 1904
HpaII CCGG 4 cut(s) 371, 554, 737, 1780
HphI GGTGA 6 cut(s) 294, 477, 660, 762, 906, 1664
Hpy166II GTNNAC 5 cut(s) 266, 449, 632, 808, 1375
Hpy8I GTNNAC 5 cut(s) 266, 449, 632, 808, 1375
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 847, 1286
Hsp92II CATG 6 cut(s) 188, 1012, 1235, 1256, 1522, 1660
Kpn2I TCCGGA 1 cut(s) 1779
Ksp22I TGATCA 2 cut(s) 997, 1255
LguI GCTCTTC 1 cut(s) 159
LmnI GCTCC 2 cut(s) 1610, 1648
Lsp1109I GCAGC 4 cut(s) 136, 1457, 1641, 1939
LweI GCATC 2 cut(s) 113, 1565
MaeI CTAG 4 cut(s) 23, 990, 1305, 1817
MaeIII GTNAC 7 cut(s) 158, 257, 440, 623, 1591, 1634, 1670
MflI RGATCY 3 cut(s) 1056, 1138, 1843
MhlI GDGCHC 3 cut(s) 97, 1282, 1653
MluCI AATT 5 cut(s) 856, 1074, 1766, 1899, 1943
MlyI GAGTC 1 cut(s) 209
MroI TCCGGA 1 cut(s) 1779
MroXI GAANNNNTTC 2 cut(s) 39, 1743
MseI TTAA 5 cut(s) 72, 1769, 1910, 1967, 1998
MslI CAYNNNNRTG 1 cut(s) 1523
MspA1I CMGCKG 2 cut(s) 149, 1215
MspCI CTTAAG 1 cut(s) 1909
MspI CCGG 4 cut(s) 371, 554, 737, 1780
MspR9I CCNGG 4 cut(s) 246, 429, 612, 1356
MvaI CCWGG 4 cut(s) 246, 429, 612, 1356
MwoI GCNNNNNNNGC 3 cut(s) 101, 847, 1286
NdeI CATATG 1 cut(s) 1756
NlaIII CATG 6 cut(s) 188, 1012, 1235, 1256, 1522, 1660
NlaIV GGNNCC 4 cut(s) 947, 1058, 1650, 1784
NmeAIII GCCGAG 1 cut(s) 1439
NmuCI GTSAC 7 cut(s) 158, 257, 440, 623, 1591, 1634, 1670
NspI RCATGY 1 cut(s) 1660
PaqCI CACCTGC 3 cut(s) 313, 496, 679
PciSI GCTCTTC 1 cut(s) 159
PdmI GAANNNNTTC 2 cut(s) 39, 1743
PfeI GAWTC 1 cut(s) 1904
PkrI GCNGC 4 cut(s) 151, 1447, 1631, 1929
PleI GAGTC 1 cut(s) 208
PpsI GAGTC 1 cut(s) 208
Psp124BI GAGCTC 1 cut(s) 1282
Psp6I CCWGG 4 cut(s) 244, 427, 610, 1354
PspGI CCWGG 4 cut(s) 244, 427, 610, 1354
PspN4I GGNNCC 4 cut(s) 947, 1058, 1650, 1784
PspPI GGNCC 1 cut(s) 894
PstI CTGCAG 1 cut(s) 1929
PstNI CAGNNNCTG 1 cut(s) 133
PsuI RGATCY 3 cut(s) 1056, 1138, 1843
PvuII CAGCTG 1 cut(s) 149
RsaI GTAC 9 cut(s) 265, 345, 448, 528, 631, 711, 807, 1490, 1958
RsaNI GTAC 9 cut(s) 264, 344, 447, 527, 630, 710, 806, 1489, 1957
RseI CAYNNNNRTG 1 cut(s) 1523
SacI GAGCTC 1 cut(s) 1282
SapI GCTCTTC 1 cut(s) 159
SaqAI TTAA 5 cut(s) 72, 1769, 1910, 1967, 1998
SatI GCNGC 4 cut(s) 150, 1446, 1630, 1928
Sau96I GGNCC 1 cut(s) 894
ScaI AGTACT 1 cut(s) 1490
SchI GAGTC 1 cut(s) 209
ScrFI CCNGG 4 cut(s) 246, 429, 612, 1356
SduI GDGCHC 3 cut(s) 97, 1282, 1653
SfaNI GCATC 2 cut(s) 113, 1565
SfcI CTRYAG 2 cut(s) 1266, 1925
SmiMI CAYNNNNRTG 1 cut(s) 1523
SmlI CTYRAG 1 cut(s) 1909
SmoI CTYRAG 1 cut(s) 1909
SpeI ACTAGT 1 cut(s) 1304
Sse9I AATT 5 cut(s) 856, 1074, 1766, 1899, 1943
SsiI CCGC 1 cut(s) 1215
SspMI CTAG 4 cut(s) 23, 990, 1305, 1817
SstI GAGCTC 1 cut(s) 1282
StyD4I CCNGG 4 cut(s) 244, 427, 610, 1354
StyI CCWWGG 1 cut(s) 1341
TaqI TCGA 4 cut(s) 58, 84, 1333, 1868
TasI AATT 5 cut(s) 856, 1074, 1766, 1899, 1943
TatI WGTACW 5 cut(s) 263, 446, 629, 805, 1488
TfiI GAWTC 1 cut(s) 1904
Tru1I TTAA 5 cut(s) 72, 1769, 1910, 1967, 1998
Tru9I TTAA 5 cut(s) 72, 1769, 1910, 1967, 1998
TscAI CASTG 9 cut(s) 381, 387, 424, 564, 570, 607, 747, 753, 1639
TseFI GTSAC 7 cut(s) 158, 257, 440, 623, 1591, 1634, 1670
TseI GCWGC 4 cut(s) 149, 1445, 1629, 1927
Tsp45I GTSAC 7 cut(s) 158, 257, 440, 623, 1591, 1634, 1670
TspRI CASTG 9 cut(s) 381, 387, 424, 564, 570, 607, 747, 753, 1639
Vha464I CTTAAG 1 cut(s) 1909
XapI RAATTY 1 cut(s) 856
XbaI TCTAGA 1 cut(s) 1816
XceI RCATGY 1 cut(s) 1660
XmnI GAANNNNTTC 2 cut(s) 39, 1743
XspI CTAG 4 cut(s) 23, 990, 1305, 1817
ZrmI AGTACT 1 cut(s) 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.