Rorug04G0050700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0006771
Physical Location & Seq
Reverse (-)
7826741 .. 7830213
3473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0050700.1

Sequence Viewer

Length: 2043 bp
ATGAAACGTAGCAAGATGTCCCGCTGCAGCATGCGCATGCGGCGCAGCGTGCATTGGACATTGTTTCCTCAATGTTCTTTGATTCTTCTCCTTCTGTTTCATATTAACGTTGCCTCCTCAGCTGCACCCCCATCAGACCCCACAGACACCCTCCTCAAGTTCAAGGACTCACTCAAGATTAGTGGTAATGCGCTGAGTAATTGGGTGAAGACCACGCCTCCGTGCGATGGCAGAAAGGCGAATTGGGATGGCGTTCTTTGTGGCGAGGGGAAGATTTGGGGCTTGCAGCTTGAAAAGATGGGGTTAAGCGGCCACATTAATGTCACAGCACTCACGCAGCTTCCAGACTTGAGAACCATAAGCATGATGCAAAATAATTTTGAGGGTTCGTTGCCGGACTGGAGGAAACTTAGTGCGTTGAAAACGTTGTATATGTCTGAAAATAAATTCTCGGGGGACATTCCCTCCGACTTGTTCCAGGGAATGAAGCAATTGAAGAAGCTTCATTTGGCAAATAACCAATTTACGGGTCAGATTCCCAAGTCGTTGACAACCTTGGATAAGCTGGTGGAGCTGACCCTTCAAGGGAACAAATTTTCAGGCAAAATACCAGATTTTCCACAAGTTCGATGGACTGTCTTTAATGCGTCCAAAAACGACTTGGAGGGTGAGATCCCAGACAGCTTGAGAAAGTTGAGTGCAGACTTCTTTGCTGGGAATAAAGATCTATGTGGAGCTCCATTACATGCATGCTCAGCTCCCTCCTCACACGTTAATACAGAGAAGCCCACGGGTGTGAGCACCGCCCTAATTGTGATTATGATTGTGATAGCAGTCATATCCATCGGTGCGGCAATTTTCTTCATCATCGTCAGACGTCGCAACAAAAGATCCGAATACTTATCATCAAATATAGAGGCTCCACCGGCACCATCAGTCCATAACAGATCGGTATCACCAGTTCCAAAAGAACCAGACCAGGTTAGCCAAACCTCAGAGCACTCGAGTAAAGGAACGGGAGGAGGAGGAGGAAGCAGTGGAAAGAAGGCTGATAGCTTGAAGCTCTCGTTTGTCCGAGACGACAGGGAAAGGTTTGATATGCAAGACTTGCTAAAAGCCTCCGCCGAGGTGTTGGGCAGCGGCAGCTTTGGGTCTTCTTACAAGGCCGCGCTGCTGACTGGACCGGTGATGGTTGTGAAGAGGTATAAGCAGATGAACAATGTGGGAAGAGAGGAGTTCCAAGAGCATATGAGGAGAATAGGGAGACTGGGACACCCTAATTTGCTTCCACTTGTGGCTTATTACTATAAGAAAGAAGAGAAGCTCTTGATTACCGACCATGTTCCGAATGGCAGCTTGGCTGTTCGTCTTCATGGACACCAAAGCTTAGGTCAACCAAGCCTTGACTGGCCAACGCGTTTGAAGATTGTCAAAGGTGTAGCCCAAGGCTTAAAATACCTCTACAGTGAGCTGCCGAGCGTAATCACACCCCACGGCCACCTGAAATCCTCGAACGTTCTTCTCAGCAAATCCTTCGAACCCCTCATCACCGACTATGGCCTAATTCCTGTAGTTAACCAAGAGCATGCTCAGACCCTAATGGTGGCGTACAAGTCCCCTGAGTACGTTGCAACCAAGCGGATCACAAAGAAGACCGATGTATGGAGCCTCGGTGTGCTCATCTTGGAAATCCTAACAGGGAAGTTGCCAACCAACTTTTTGCAACATGGTAAGGGAAGCGAGGAGGATCTGGCGAGCTGGGTGAACTCGGTGCCTAGAGAGGAGTGGTTCACGCAGGTGTTCGATAGGGAAATGGGTGCAAACAAGAACTGCGAGGGGGAGATGCTGAAGCTCTTGAACATTGGGTTGGATTGTTGCGAAGGGGATGTGGAGAAGAGGTGGGATATGAAAGAGGCTGTGGAGAGGATTGAAGAGTTGAAAGAACAGGAAAATGGTGGTGGTGGTAGTGGTAGTGGTGGCGGTCTGAATGAGGATCTCATGCCTTCTTGCGCTAGTGAAGGTGACACCACGAAGATGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

680

Amino Acids

75.02

Weight (kDa)

8.89

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 48 - 87 2e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 139 - 199 7.7e-09 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 376 - 642 1.7e-30 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 376 - 641 7.9e-30 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1786
AatII GACGTC 1 cut(s) 880
Acc16I TGCGCA 1 cut(s) 35
Acc36I ACCTGC 1 cut(s) 1786
AccB1I GGYRCC 2 cut(s) 928, 1771
AccII CGCG 2 cut(s) 1169, 1417
AclI AACGTT 3 cut(s) 108, 425, 1515
AclWI GGATC 5 cut(s) 667, 885, 1649, 1755, 2001
AcoI YGGCCR 3 cut(s) 310, 1409, 1495
AcsI RAATTY 2 cut(s) 446, 593
AcuI CTGAAG 1 cut(s) 1868
AcyI GRCGYC 1 cut(s) 877
AfaI GTAC 2 cut(s) 1610, 1625
AfiI CCNNNNNNNGG 5 cut(s) 227, 526, 585, 1603, 1662
AflIII ACRYGT 2 cut(s) 769, 1415
AgeI ACCGGT 1 cut(s) 1183
AjnI CCWGG 2 cut(s) 477, 978
AjuI GAANNNNNNNTTGG 8 cut(s) 226, 258, 491, 523, 1340, 1372, 1850, 1882
AleI CACNNNNGTG 2 cut(s) 794, 1796
Alw21I GWGCWC 4 cut(s) 739, 803, 1002, 1680
Alw26I GTCTC 2 cut(s) 1071, 1258
AlwI GGATC 5 cut(s) 667, 885, 1649, 1755, 2001
Ama87I CYCGRG 2 cut(s) 451, 1003
AoxI GGCC 5 cut(s) 310, 1164, 1409, 1495, 1558
ApoI RAATTY 2 cut(s) 446, 593
ArsI GACNNNNNNTTYG 2 cut(s) 1375, 1407
AseI ATTAAT 1 cut(s) 318
AsiGI ACCGGT 1 cut(s) 1183
AspLEI GCGC 5 cut(s) 36, 45, 193, 1171, 2012
AspS9I GGNCC 1 cut(s) 1181
AsuHPI GGTGA 7 cut(s) 217, 680, 948, 1198, 1540, 1774, 2033
AsuII TTCGAA 1 cut(s) 1536
AvaI CYCGRG 2 cut(s) 451, 1003
AvaII GGWCC 1 cut(s) 1181
BalI TGGCCA 1 cut(s) 1411
BanI GGYRCC 2 cut(s) 928, 1771
BanII GRGCYC 1 cut(s) 739
BbsI GAAGAC 4 cut(s) 215, 1146, 1361, 1658
Bbv12I GWGCWC 4 cut(s) 739, 803, 1002, 1680
BbvCI CCTCAGC 1 cut(s) 118
BccI CCATC 9 cut(s) 139, 221, 242, 292, 624, 851, 940, 1183, 2029
BceAI ACGGC 1 cut(s) 1510
BcgI CGANNNNNNTGC 2 cut(s) 1516, 1550
BciT130I CCWGG 2 cut(s) 479, 980
BcoDI GTCTC 2 cut(s) 1071, 1258
BfaI CTAG 2 cut(s) 1776, 2013
BfmI CTRYAG 3 cut(s) 25, 1462, 1569
BfuAI ACCTGC 1 cut(s) 1786
BglII AGATCT 1 cut(s) 724
BlpI GCTNAGC 1 cut(s) 754
Bme1390I CCNGG 2 cut(s) 479, 980
Bme18I GGWCC 1 cut(s) 1181
BmeT110I CYCGRG 2 cut(s) 451, 1003
BmgT120I GGNCC 1 cut(s) 1181
BmiI GGNNCC 4 cut(s) 921, 930, 1667, 1773
BmrFI CCNGG 2 cut(s) 479, 980
BmrI ACTGGG 1 cut(s) 1277
BmsI GCATC 2 cut(s) 357, 1833
BmuI ACTGGG 1 cut(s) 1277
BpiI GAAGAC 4 cut(s) 215, 1146, 1361, 1658
BpmI CTGGAG 1 cut(s) 421
Bpu10I CCTNAGC 2 cut(s) 118, 1387
Bpu1102I GCTNAGC 1 cut(s) 754
Bpu14I TTCGAA 1 cut(s) 1536
BpuEI CTTGAG 4 cut(s) 140, 158, 370, 706
BsaBI GATNNNNATC 1 cut(s) 952
BsaHI GRCGYC 1 cut(s) 877
BsaJI CCNNGG 7 cut(s) 478, 555, 789, 1125, 1444, 1492, 1669
BsaWI WCCGGW 1 cut(s) 1183
Bsc4I CCNNNNNNNGG 5 cut(s) 227, 526, 585, 1603, 1662
Bse118I RCCGGY 2 cut(s) 925, 1183
Bse1I ACTGG 5 cut(s) 404, 959, 1183, 1272, 1412
Bse8I GATNNNNATC 1 cut(s) 952
BseBI CCWGG 2 cut(s) 479, 980
BseDI CCNNGG 7 cut(s) 478, 555, 789, 1125, 1444, 1492, 1669
BseGI GGATG 2 cut(s) 253, 1891
BseJI GATNNNNATC 1 cut(s) 952
BseLI CCNNNNNNNGG 5 cut(s) 227, 526, 585, 1603, 1662
BseMII CTCAG 7 cut(s) 132, 185, 768, 1008, 1537, 1604, 1611
BseNI ACTGG 5 cut(s) 404, 959, 1183, 1272, 1412
BseYI CCCAGC 2 cut(s) 713, 1758
BsgI GTGCAG 2 cut(s) 108, 720
Bsh1236I CGCG 2 cut(s) 1169, 1417
BshFI GGCC 5 cut(s) 312, 1166, 1411, 1497, 1560
BshNI GGYRCC 2 cut(s) 928, 1771
BshTI ACCGGT 1 cut(s) 1183
BsiHKAI GWGCWC 4 cut(s) 739, 803, 1002, 1680
BsiHKCI CYCGRG 2 cut(s) 451, 1003
BsiSI CCGG 3 cut(s) 395, 926, 1184
BslFI GGGAC 4 cut(s) 4, 470, 1284, 1600
BslI CCNNNNNNNGG 5 cut(s) 227, 526, 585, 1603, 1662
BsmAI GTCTC 2 cut(s) 1071, 1258
BsmBI CGTCTC 1 cut(s) 1071
BsmFI GGGAC 4 cut(s) 4, 470, 1284, 1600
BsnI GGCC 5 cut(s) 312, 1166, 1411, 1497, 1560
BsoBI CYCGRG 2 cut(s) 451, 1003
Bsp119I TTCGAA 1 cut(s) 1536
Bsp1286I GDGCHC 4 cut(s) 739, 803, 1002, 1680
Bsp143I GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
Bsp1720I GCTNAGC 1 cut(s) 754
BspANI GGCC 5 cut(s) 312, 1166, 1411, 1497, 1560
BspCNI CTCAG 7 cut(s) 131, 186, 767, 1007, 1536, 1603, 1612
BspFNI CGCG 2 cut(s) 1169, 1417
BspLI GGNNCC 4 cut(s) 921, 930, 1667, 1773
BspMAI CTGCAG 1 cut(s) 29
BspMI ACCTGC 1 cut(s) 1786
BspPI GGATC 5 cut(s) 667, 885, 1649, 1755, 2001
BspT104I TTCGAA 1 cut(s) 1536
BspT107I GGYRCC 2 cut(s) 928, 1771
BsrFI RCCGGY 2 cut(s) 925, 1183
BsrI ACTGG 5 cut(s) 404, 959, 1183, 1272, 1412
BssAI RCCGGY 2 cut(s) 925, 1183
BssECI CCNNGG 7 cut(s) 478, 555, 789, 1125, 1444, 1492, 1669
BssMI GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
BssNI GRCGYC 1 cut(s) 877
BssT1I CCWWGG 2 cut(s) 555, 1444
Bst2UI CCWGG 2 cut(s) 479, 980
Bst4CI ACNGT 2 cut(s) 637, 1466
Bst6I CTCTTC 5 cut(s) 1193, 1222, 1311, 1889, 1926
BstACI GRCGYC 1 cut(s) 877
BstAPI GCANNNNNTGC 1 cut(s) 1108
BstBI TTCGAA 1 cut(s) 1536
BstC8I GCNNGC 7 cut(s) 32, 38, 50, 284, 751, 1587, 1756
BstDEI CTNAG 9 cut(s) 118, 194, 410, 754, 994, 1387, 1523, 1590, 1620
BstDSI CCRYGG 2 cut(s) 789, 1492
BstF5I GGATG 2 cut(s) 253, 1891
BstFNI CGCG 2 cut(s) 1169, 1417
BstHHI GCGC 5 cut(s) 36, 45, 193, 1171, 2012
BstKTI GATC 7 cut(s) 675, 727, 893, 950, 1644, 1750, 1996
BstMAI GTCTC 2 cut(s) 1071, 1258
BstMBI GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
BstNI CCWGG 2 cut(s) 479, 980
BstNSI RCATGY 5 cut(s) 34, 40, 749, 753, 1589
BstSCI CCNGG 2 cut(s) 477, 978
BstSFI CTRYAG 3 cut(s) 25, 1462, 1569
BstUI CGCG 2 cut(s) 1169, 1417
BstV2I GAAGAC 4 cut(s) 215, 1146, 1361, 1658
BstX2I RGATCY 5 cut(s) 672, 724, 890, 1747, 1993
BstXI CCANNNNNNTGG 1 cut(s) 2035
BstYI RGATCY 5 cut(s) 672, 724, 890, 1747, 1993
BsuRI GGCC 5 cut(s) 312, 1166, 1411, 1497, 1560
BtgI CCRYGG 2 cut(s) 789, 1492
BtgZI GCGATG 1 cut(s) 240
BtsCI GGATG 2 cut(s) 253, 1891
BtsI GCAGTG 1 cut(s) 1042
BtsIMutI CAGTG 2 cut(s) 1042, 1471
BveI ACCTGC 1 cut(s) 1786
Cac8I GCNNGC 7 cut(s) 32, 38, 50, 284, 751, 1587, 1756
CfoI GCGC 5 cut(s) 36, 45, 193, 1171, 2012
Cfr10I RCCGGY 2 cut(s) 925, 1183
Cfr13I GGNCC 1 cut(s) 1181
CseI GACGC 1 cut(s) 636
CsiI ACCWGGT 1 cut(s) 978
Csp6I GTAC 2 cut(s) 1609, 1624
CspAI ACCGGT 1 cut(s) 1183
CspCI CAANNNNNGTGG 2 cut(s) 163, 198
CviQI GTAC 2 cut(s) 1609, 1624
DdeI CTNAG 9 cut(s) 118, 194, 410, 754, 994, 1387, 1523, 1590, 1620
DpnI GATC 7 cut(s) 674, 726, 892, 949, 1643, 1749, 1995
DpnII GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
EaeI YGGCCR 3 cut(s) 310, 1409, 1495
Eam1104I CTCTTC 5 cut(s) 1193, 1222, 1311, 1889, 1926
EarI CTCTTC 5 cut(s) 1193, 1222, 1311, 1889, 1926
EciI GGCGGA 1 cut(s) 1111
Ecl136II GAGCTC 1 cut(s) 737
Eco130I CCWWGG 2 cut(s) 555, 1444
Eco24I GRGCYC 1 cut(s) 739
Eco47I GGWCC 1 cut(s) 1181
Eco53kI GAGCTC 1 cut(s) 737
Eco57I CTGAAG 1 cut(s) 1868
Eco88I CYCGRG 2 cut(s) 451, 1003
EcoICRI GAGCTC 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 477, 978
EcoT14I CCWWGG 2 cut(s) 555, 1444
EcoT22I ATGCAT 1 cut(s) 751
EcoT38I GRGCYC 1 cut(s) 739
ErhI CCWWGG 2 cut(s) 555, 1444
Esp3I CGTCTC 1 cut(s) 1071
FaqI GGGAC 4 cut(s) 4, 470, 1284, 1600
FauI CCCGC 1 cut(s) 29
FauNDI CATATG 1 cut(s) 1248
FokI GGATG 2 cut(s) 260, 1898
FriOI GRGCYC 1 cut(s) 739
FspAI RTGCGCAY 1 cut(s) 35
FspBI CTAG 2 cut(s) 1776, 2013
FspI TGCGCA 1 cut(s) 35
GlaI GCGC 5 cut(s) 35, 44, 192, 1170, 2011
GsaI CCCAGC 2 cut(s) 717, 1762
GsuI CTGGAG 1 cut(s) 421
HaeIII GGCC 5 cut(s) 312, 1166, 1411, 1497, 1560
HapII CCGG 3 cut(s) 395, 926, 1184
HgaI GACGC 1 cut(s) 636
HhaI GCGC 5 cut(s) 36, 45, 193, 1171, 2012
Hin1I GRCGYC 1 cut(s) 877
Hin6I GCGC 5 cut(s) 34, 43, 191, 1169, 2010
HinP1I GCGC 5 cut(s) 34, 43, 191, 1169, 2010
HincII GTYRAC 3 cut(s) 549, 1394, 1576
HindII GTYRAC 3 cut(s) 549, 1394, 1576
HindIII AAGCTT 2 cut(s) 500, 1384
HinfI GANTC 3 cut(s) 82, 167, 535
HpaI GTTAAC 1 cut(s) 1576
HpaII CCGG 3 cut(s) 395, 926, 1184
HphI GGTGA 7 cut(s) 217, 680, 948, 1198, 1540, 1774, 2033
Hpy166II GTNNAC 5 cut(s) 549, 1394, 1576, 1765, 1791
Hpy188III TCNNGA 4 cut(s) 175, 344, 1327, 1855
Hpy8I GTNNAC 5 cut(s) 549, 1394, 1576, 1765, 1791
Hpy99I CGWCG 1 cut(s) 882
HpyAV CCTTC 7 cut(s) 101, 590, 1039, 1543, 1874, 2012, 2013
HpyCH4III ACNGT 2 cut(s) 637, 1466
HpyCH4IV ACGT 7 cut(s) 7, 108, 425, 771, 877, 1515, 1626
HpyF3I CTNAG 9 cut(s) 118, 194, 410, 754, 994, 1387, 1523, 1590, 1620
HpySE526I ACGT 7 cut(s) 7, 108, 425, 771, 877, 1515, 1626
Hsp92I GRCGYC 1 cut(s) 877
HspAI GCGC 5 cut(s) 34, 43, 191, 1169, 2010
KspAI GTTAAC 1 cut(s) 1576
Kzo9I GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
LmnI GCTCC 6 cut(s) 571, 734, 742, 763, 925, 1665
LweI GCATC 2 cut(s) 357, 1833
MabI ACCWGGT 1 cut(s) 978
MaeI CTAG 2 cut(s) 1776, 2013
MaeII ACGT 7 cut(s) 7, 108, 425, 771, 877, 1515, 1626
MaeIII GTNAC 2 cut(s) 322, 2021
MalI GATC 7 cut(s) 674, 726, 892, 949, 1643, 1749, 1995
MboI GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
MfeI CAATTG 1 cut(s) 491
MflI RGATCY 5 cut(s) 672, 724, 890, 1747, 1993
MhlI GDGCHC 4 cut(s) 739, 803, 1002, 1680
MlsI TGGCCA 1 cut(s) 1411
MluI ACGCGT 1 cut(s) 1415
MluNI TGGCCA 1 cut(s) 1411
MlyI GAGTC 1 cut(s) 161
MmeI TCCRAC 2 cut(s) 492, 1848
Mox20I TGGCCA 1 cut(s) 1411
Mph1103I ATGCAT 1 cut(s) 751
MscI TGGCCA 1 cut(s) 1411
MseI TTAA 7 cut(s) 105, 305, 318, 642, 774, 1451, 1575
MslI CAYNNNNRTG 6 cut(s) 35, 318, 362, 794, 1796, 2033
Msp20I TGGCCA 1 cut(s) 1411
MspA1I CMGCKG 3 cut(s) 24, 122, 1140
MspI CCGG 3 cut(s) 395, 926, 1184
MspR9I CCNGG 2 cut(s) 479, 980
MunI CAATTG 1 cut(s) 491
MvaI CCWGG 2 cut(s) 479, 980
MvnI CGCG 2 cut(s) 1169, 1417
NdeI CATATG 1 cut(s) 1248
NdeII GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
NlaIV GGNNCC 4 cut(s) 921, 930, 1667, 1773
NmeAIII GCCGAG 2 cut(s) 1150, 1500
NmuCI GTSAC 2 cut(s) 322, 2021
NsbI TGCGCA 1 cut(s) 35
NsiI ATGCAT 1 cut(s) 751
NspI RCATGY 5 cut(s) 34, 40, 749, 753, 1589
NspV TTCGAA 1 cut(s) 1536
OliI CACNNNNGTG 2 cut(s) 794, 1796
PaeI GCATGC 4 cut(s) 34, 40, 753, 1589
PaeR7I CTCGAG 1 cut(s) 1003
PaqCI CACCTGC 1 cut(s) 1786
PfeI GAWTC 2 cut(s) 82, 535
PinAI ACCGGT 1 cut(s) 1183
PleI GAGTC 1 cut(s) 161
PpsI GAGTC 1 cut(s) 161
PshBI ATTAAT 1 cut(s) 318
Psp124BI GAGCTC 1 cut(s) 739
Psp1406I AACGTT 3 cut(s) 108, 425, 1515
Psp6I CCWGG 2 cut(s) 477, 978
PspFI CCCAGC 2 cut(s) 713, 1758
PspGI CCWGG 2 cut(s) 477, 978
PspN4I GGNNCC 4 cut(s) 921, 930, 1667, 1773
PspPI GGNCC 1 cut(s) 1181
PspXI VCTCGAGB 1 cut(s) 1003
PsrI GAACNNNNNNTAC 2 cut(s) 945, 977
PstI CTGCAG 1 cut(s) 29
PsuI RGATCY 5 cut(s) 672, 724, 890, 1747, 1993
PvuII CAGCTG 1 cut(s) 122
RsaI GTAC 2 cut(s) 1610, 1625
RsaNI GTAC 2 cut(s) 1609, 1624
RseI CAYNNNNRTG 6 cut(s) 35, 318, 362, 794, 1796, 2033
SacI GAGCTC 1 cut(s) 739
SaqAI TTAA 7 cut(s) 105, 305, 318, 642, 774, 1451, 1575
Sau3AI GATC 7 cut(s) 672, 724, 890, 947, 1641, 1747, 1993
Sau96I GGNCC 1 cut(s) 1181
SchI GAGTC 1 cut(s) 161
ScrFI CCNGG 2 cut(s) 479, 980
SduI GDGCHC 4 cut(s) 739, 803, 1002, 1680
SexAI ACCWGGT 1 cut(s) 978
SfaNI GCATC 2 cut(s) 357, 1833
SfcI CTRYAG 3 cut(s) 25, 1462, 1569
Sfr274I CTCGAG 1 cut(s) 1003
SfuI TTCGAA 1 cut(s) 1536
SinI GGWCC 1 cut(s) 1181
SlaI CTCGAG 1 cut(s) 1003
SmiMI CAYNNNNRTG 6 cut(s) 35, 318, 362, 794, 1796, 2033
SmlI CTYRAG 5 cut(s) 155, 173, 349, 685, 1003
SmoI CTYRAG 5 cut(s) 155, 173, 349, 685, 1003
SphI GCATGC 4 cut(s) 34, 40, 753, 1589
SspMI CTAG 2 cut(s) 1776, 2013
SstI GAGCTC 1 cut(s) 739
StyD4I CCNGG 2 cut(s) 477, 978
StyI CCWWGG 2 cut(s) 555, 1444
TaaI ACNGT 2 cut(s) 637, 1466
TaiI ACGT 7 cut(s) 10, 111, 428, 774, 880, 1518, 1629
TaqI TCGA 5 cut(s) 628, 1004, 1511, 1536, 1803
TaqII GACCGA 1 cut(s) 1670
TauI GCSGC 5 cut(s) 43, 312, 854, 1143, 1169
TfiI GAWTC 2 cut(s) 82, 535
Tru1I TTAA 7 cut(s) 105, 305, 318, 642, 774, 1451, 1575
Tru9I TTAA 7 cut(s) 105, 305, 318, 642, 774, 1451, 1575
TscAI CASTG 2 cut(s) 1042, 1471
TseFI GTSAC 2 cut(s) 322, 2021
Tsp45I GTSAC 2 cut(s) 322, 2021
TspDTI ATGAA 8 cut(s) 17, 89, 494, 500, 853, 1229, 1361, 1922
TspGWI ACGGA 1 cut(s) 210
TspRI CASTG 2 cut(s) 1042, 1471
VpaK11BI GGWCC 1 cut(s) 1181
VspI ATTAAT 1 cut(s) 318
XapI RAATTY 2 cut(s) 446, 593
XceI RCATGY 5 cut(s) 34, 40, 749, 753, 1589
XcmI CCANNNNNNNNNTGG 4 cut(s) 627, 658, 1346, 1404
XhoI CTCGAG 1 cut(s) 1003
XspI CTAG 2 cut(s) 1776, 2013
ZraI GACGTC 1 cut(s) 878
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.