Rorug04G0171700

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0010256
Physical Location & Seq
Reverse (-)
30192382 .. 30197082
4701 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0171700.1

Sequence Viewer

Length: 1449 bp
ATGGCGGGTAGAAAGCTTGTTCGAGATTTGTTCCTCCACAGAAAATCCCTTCTTCTTCAGTCTCGACAACAGGTTTCAGGCACGAGAATTCGATTGCTTTCGGAAAATGGGTATTGGGGGAATCGTCGATTCAGTGTCTTCAATGAGTTTTCGAAGCAGGTCAAGGAGGAAACCAATAAGAATCCACAATTTAAAAAGACGGTCAAGGAGCTGAAGGAGCAAGTGGAAGAGCTCAAGGGGGTGAAAGAAGATCTGAAAGTCAGAACGAAGCAGACAACGGAGCAGCTGTACAAGCAGGTGGATGGTGTTTGGACAGAGGCTGAAGAAGCAGCAAAGAAGGTCTCTGCAAATGTAAAAGAGAAGATCTCGGCTGCCACAGAAGAGGTTAAAGGATCTTTTGGAATTGGGAAAGAGCAGGCTTCAGGGCCTTCTGGTGCTTCAGCTGATCATGTTGCTGATGAAAAAGATGGAAGTAAGGCCTCGTCCTCGGAAGATAAACACCAGCACTCAGGGTCTAGTGATACTGCAGAAACATTATTTGGAAAATTTAGGTCAAGGGTGTCTTCATCGAATGTTTCCTCTGTCTTTCATAGATTCAGGGAAGCAAAGTTTGTTGACATGGCCAAAAAAGGATATGATATTGTAAAGGATGAGTTAAATGGTAGTCCAAGTAAGAAAAAGCATCTAGGGTTTGACCCTTCTTCCATCCCACGAGTTAAAAGAAGTGCAACAAGTGACATTGCTATTGTACCCACCAAACAATCTCGTTGGAGCAAAAAGTGGGAGGCTTTCAGAATGAAGATGCAAGGGAATCCTCTATTCAAGCGTATCAGTGGGATGAGTGAACCAGTTAAAATAAAAAGCGAGGAGATTATGGATGACATGAAGGAACGCTGGGAAACTACTGATAGCCCAATAGTTCACAAAATTCAGGATATCAATGAAGCTATTTTTCAAGAAACAAATGCTGCTGCATCAATCAAGGAGATCCATGCCCGAGATCCATCTTTCTCTTTACCAGATTTTGTGGTAGAAGTTCAGAATGCGGTCAAACCTGTGTTAAATGCTTACATGAAGGGAGATATTGAAACATTGAAGAAGTACTGTGCTAATGAGGTGATTGAGCGGTGTACAGCCGAGCGTCAGGCTTTTCAAAGCCATGGCATCTTTTTTGATAACAAGATTCTACATATATCTGAGGTGGAAGTAAGAGATACCAAACTGATGGGGGACTCTCCCATAATCATTGTAGCGTTCCAAACACAGCAAGTCTATTGTGTACGTGATAAAAATGGTGCAATAACAGAAGGCAGCCAGGATACAATCCAAACAGTGTATTACGCCTGGGCCATGCAACCTTGGGATCCCGAAGAACTTCCTGAAGGTGCTCTTTTCCCGATATGGAGAGTAAGAGAGATGCAACAATTTGGAATTCAATCCCTTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000209 GO:0000922 GO:0000930 GO:0001654 GO:0001754 GO:0003407 GO:0003674 GO:0003676 GO:0003677 GO:0003823 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005814 GO:0005815 GO:0005819 GO:0005856 GO:0005929 GO:0006139 GO:0006351 GO:0006464 GO:0006508 GO:0006511 GO:0006513 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0007423 GO:0008104 GO:0008150 GO:0008152 GO:0008219 GO:0008630 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009653 GO:0009887 GO:0009893 GO:0009987 GO:0010467 GO:0010498 GO:0010604 GO:0010842 GO:0010941 GO:0012501 GO:0015630 GO:0016043 GO:0016070 GO:0016567 GO:0016604 GO:0016605 GO:0016607 GO:0016740 GO:0016925 GO:0018130 GO:0018193 GO:0018205 GO:0019222 GO:0019438 GO:0019538 GO:0019787 GO:0019789 GO:0019899 GO:0019941 GO:0022008 GO:0023052 GO:0030154 GO:0030163 GO:0030182 GO:0030496 GO:0031323 GO:0031325 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032391 GO:0032446 GO:0032501 GO:0032502 GO:0032507 GO:0032774 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0035556 GO:0035845 GO:0035869 GO:0036064 GO:0036211 GO:0042461 GO:0042462 GO:0042670 GO:0042981 GO:0042995 GO:0043005 GO:0043010 GO:0043066 GO:0043067 GO:0043069 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044450 GO:0044451 GO:0044463 GO:0044464 GO:0044547 GO:0045185 GO:0046483 GO:0046530 GO:0046548 GO:0046549 GO:0048468 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048592 GO:0048593 GO:0048646 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051235 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051438 GO:0051443 GO:0051457 GO:0051603 GO:0051641 GO:0051651 GO:0051716 GO:0060041 GO:0060042 GO:0060219 GO:0060255 GO:0060548 GO:0061630 GO:0061659 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070647 GO:0070727 GO:0070936 GO:0071704 GO:0071840 GO:0072595 GO:0080090 GO:0090304 GO:0090596 GO:0097159 GO:0097190 GO:0097193 GO:0097458 GO:0097659 GO:0097730 GO:0097731 GO:0097733 GO:0120025 GO:0120038 GO:0140096 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1902494 GO:1903320 GO:1903322 GO:1990234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWI zf-C3HC4 zf-C3HC4_3 zf-RING_2

Protein Analysis

482

Amino Acids

54.68

Weight (kDa)

8.85

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tim44 PF04280 324 - 475 3.3e-39 Tim44-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 286
Acc36I ACCTGC 2 cut(s) 148, 286
AccBSI CCGCTC 1 cut(s) 1126
AciI CCGC 3 cut(s) 5, 1046, 1126
AclWI GGATC 5 cut(s) 400, 982, 995, 1358, 1371
AcoI YGGCCR 1 cut(s) 621
AcsI RAATTY 4 cut(s) 87, 545, 927, 1431
AcuI CTGAAG 6 cut(s) 41, 233, 342, 405, 423, 1401
AfaI GTAC 5 cut(s) 290, 750, 1103, 1132, 1281
AgsI TTSAA 7 cut(s) 142, 823, 956, 1088, 1096, 1154, 1436
AjnI CCWGG 2 cut(s) 1314, 1343
AjuI GAANNNNNNNTTGG 2 cut(s) 522, 554
AluBI AGCT 6 cut(s) 16, 211, 232, 286, 443, 947
AluI AGCT 6 cut(s) 16, 211, 232, 286, 443, 947
Alw21I GWGCWC 2 cut(s) 234, 1390
Alw26I GTCTC 2 cut(s) 66, 346
AlwI GGATC 5 cut(s) 400, 982, 995, 1358, 1371
AlwNI CAGNNNCTG 1 cut(s) 320
Ama87I CYCGRG 1 cut(s) 996
AoxI GGCC 4 cut(s) 425, 477, 621, 1347
ApeKI GCWGC 6 cut(s) 283, 329, 371, 968, 971, 1311
ApoI RAATTY 4 cut(s) 87, 545, 927, 1431
Asp700I GAANNNNTTC 1 cut(s) 1374
AspS9I GGNCC 2 cut(s) 425, 1347
AsuHPI GGTGA 2 cut(s) 253, 1129
AsuII TTCGAA 1 cut(s) 152
AvaI CYCGRG 1 cut(s) 996
BalI TGGCCA 1 cut(s) 623
BamHI GGATCC 1 cut(s) 1363
BanII GRGCYC 1 cut(s) 234
BauI CACGAG 2 cut(s) 82, 711
BbsI GAAGAC 2 cut(s) 130, 555
Bbv12I GWGCWC 2 cut(s) 234, 1390
BbvI GCAGC 6 cut(s) 295, 341, 358, 955, 958, 1323
BccI CCATC 5 cut(s) 296, 461, 713, 1012, 1219
BciT130I CCWGG 2 cut(s) 1316, 1345
BciVI GTATCC 1 cut(s) 1312
BclI TGATCA 1 cut(s) 445
BcoDI GTCTC 2 cut(s) 66, 346
BfaI CTAG 2 cut(s) 516, 686
BfmI CTRYAG 1 cut(s) 525
BfuAI ACCTGC 2 cut(s) 148, 286
BfuI GTATCC 1 cut(s) 1312
BglII AGATCT 2 cut(s) 250, 363
BisI GCNGC 6 cut(s) 284, 330, 372, 969, 972, 1312
BlsI GCNGC 6 cut(s) 285, 331, 373, 970, 973, 1313
BmcAI AGTACT 1 cut(s) 1103
Bme1390I CCNGG 2 cut(s) 1316, 1345
BmeT110I CYCGRG 1 cut(s) 996
BmgT120I GGNCC 2 cut(s) 425, 1347
BmiI GGNNCC 1 cut(s) 1365
BmrFI CCNGG 2 cut(s) 1316, 1345
BmsI GCATC 5 cut(s) 691, 792, 983, 1173, 1407
BpiI GAAGAC 2 cut(s) 130, 555
BplI GAGNNNNNCTC 2 cut(s) 350, 382
Bpu14I TTCGAA 1 cut(s) 152
BpuEI CTTGAG 1 cut(s) 218
BsaAI YACGTR 1 cut(s) 1283
BsaI GGTCTC 1 cut(s) 346
BsaJI CCNNGG 4 cut(s) 486, 1159, 1344, 1358
BsaXI ACNNNNNCTCC 2 cut(s) 272, 302
Bse1I ACTGG 1 cut(s) 848
Bse3DI GCAATG 1 cut(s) 738
BseBI CCWGG 2 cut(s) 1316, 1345
BseDI CCNNGG 4 cut(s) 486, 1159, 1344, 1358
BseGI GGATG 5 cut(s) 307, 655, 705, 843, 883
BseMI GCAATG 1 cut(s) 738
BseMII CTCAG 2 cut(s) 522, 1188
BseNI ACTGG 1 cut(s) 848
BseRI GAGGAG 1 cut(s) 881
BseXI GCAGC 6 cut(s) 295, 341, 358, 955, 958, 1323
BseYI CCCAGC 1 cut(s) 894
BshFI GGCC 4 cut(s) 427, 479, 623, 1349
BsiHKAI GWGCWC 2 cut(s) 234, 1390
BsiHKCI CYCGRG 1 cut(s) 996
BslFI GGGAC 1 cut(s) 1244
BsmAI GTCTC 2 cut(s) 66, 346
BsmFI GGGAC 1 cut(s) 1244
BsmI GAATGC 1 cut(s) 1048
BsnI GGCC 4 cut(s) 427, 479, 623, 1349
Bso31I GGTCTC 1 cut(s) 346
BsoBI CYCGRG 1 cut(s) 996
Bsp119I TTCGAA 1 cut(s) 152
Bsp1286I GDGCHC 2 cut(s) 234, 1390
Bsp1407I TGTACA 2 cut(s) 288, 1130
Bsp143I GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
Bsp19I CCATGG 1 cut(s) 1159
BspACI CCGC 3 cut(s) 5, 1046, 1126
BspANI GGCC 4 cut(s) 427, 479, 623, 1349
BspCNI CTCAG 2 cut(s) 521, 1189
BspLI GGNNCC 1 cut(s) 1365
BspMAI CTGCAG 1 cut(s) 529
BspMI ACCTGC 2 cut(s) 148, 286
BspPI GGATC 5 cut(s) 400, 982, 995, 1358, 1371
BspQI GCTCTTC 1 cut(s) 222
BspT104I TTCGAA 1 cut(s) 152
BspTNI GGTCTC 1 cut(s) 346
BsrBI CCGCTC 1 cut(s) 1126
BsrDI GCAATG 1 cut(s) 738
BsrGI TGTACA 2 cut(s) 288, 1130
BsrI ACTGG 1 cut(s) 848
BssECI CCNNGG 4 cut(s) 486, 1159, 1344, 1358
BssMI GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
BssSI CACGAG 2 cut(s) 82, 711
BssT1I CCWWGG 2 cut(s) 1159, 1358
Bst2BI CACGAG 2 cut(s) 82, 711
Bst2UI CCWGG 2 cut(s) 1316, 1345
Bst4CI ACNGT 3 cut(s) 202, 1106, 1333
Bst6I CTCTTC 2 cut(s) 222, 375
BstAUI TGTACA 2 cut(s) 288, 1130
BstBAI YACGTR 1 cut(s) 1283
BstBI TTCGAA 1 cut(s) 152
BstC8I GCNNGC 1 cut(s) 417
BstDEI CTNAG 2 cut(s) 508, 1197
BstDSI CCRYGG 1 cut(s) 1159
BstF5I GGATG 5 cut(s) 307, 655, 705, 843, 883
BstKTI GATC 7 cut(s) 253, 366, 395, 448, 990, 1003, 1366
BstMAI GTCTC 2 cut(s) 66, 346
BstMBI GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
BstMWI GCNNNNNNNGC 3 cut(s) 217, 292, 326
BstNI CCWGG 2 cut(s) 1316, 1345
BstSCI CCNGG 2 cut(s) 1314, 1343
BstSFI CTRYAG 1 cut(s) 525
BstV1I GCAGC 6 cut(s) 295, 341, 358, 955, 958, 1323
BstV2I GAAGAC 2 cut(s) 130, 555
BstX2I RGATCY 6 cut(s) 250, 363, 392, 987, 1000, 1363
BstXI CCANNNNNNTGG 1 cut(s) 1225
BstYI RGATCY 6 cut(s) 250, 363, 392, 987, 1000, 1363
BsuI GTATCC 1 cut(s) 1312
BsuRI GGCC 4 cut(s) 427, 479, 623, 1349
BtgI CCRYGG 1 cut(s) 1159
BtsCI GGATG 5 cut(s) 307, 655, 705, 843, 883
BtsIMutI CAGTG 3 cut(s) 139, 838, 1338
BveI ACCTGC 2 cut(s) 148, 286
Cac8I GCNNGC 1 cut(s) 417
CaiI CAGNNNCTG 1 cut(s) 320
Cfr13I GGNCC 2 cut(s) 425, 1347
CseI GACGC 1 cut(s) 1130
Csp6I GTAC 5 cut(s) 289, 749, 1102, 1131, 1280
CviAII CATG 7 cut(s) 449, 619, 883, 992, 1072, 1160, 1351
CviQI GTAC 5 cut(s) 289, 749, 1102, 1131, 1280
DdeI CTNAG 2 cut(s) 508, 1197
DpnI GATC 7 cut(s) 252, 365, 394, 447, 989, 1002, 1365
DpnII GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
DraI TTTAAA 1 cut(s) 193
EaeI YGGCCR 1 cut(s) 621
Eam1104I CTCTTC 2 cut(s) 222, 375
EarI CTCTTC 2 cut(s) 222, 375
Ecl136II GAGCTC 1 cut(s) 232
Eco130I CCWWGG 2 cut(s) 1159, 1358
Eco147I AGGCCT 1 cut(s) 479
Eco24I GRGCYC 1 cut(s) 234
Eco31I GGTCTC 1 cut(s) 346
Eco32I GATATC 1 cut(s) 937
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 6 cut(s) 41, 233, 342, 405, 423, 1401
Eco88I CYCGRG 1 cut(s) 996
EcoICRI GAGCTC 1 cut(s) 232
EcoO109I RGGNCCY 1 cut(s) 425
EcoRI GAATTC 2 cut(s) 87, 1431
EcoRII CCWGG 2 cut(s) 1314, 1343
EcoRV GATATC 1 cut(s) 937
EcoT14I CCWWGG 2 cut(s) 1159, 1358
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 2 cut(s) 1159, 1358
FaeI CATG 7 cut(s) 452, 622, 886, 995, 1075, 1163, 1354
FalI AAGNNNNNCTT 4 cut(s) 547, 579, 1374, 1406
FaqI GGGAC 1 cut(s) 1244
FatI CATG 7 cut(s) 448, 618, 882, 991, 1071, 1159, 1350
FbaI TGATCA 1 cut(s) 445
Fnu4HI GCNGC 6 cut(s) 284, 330, 372, 969, 972, 1312
FokI GGATG 5 cut(s) 314, 662, 692, 850, 890
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 6 cut(s) 284, 330, 372, 969, 972, 1312
FspBI CTAG 2 cut(s) 516, 686
GluI GCNGC 6 cut(s) 284, 330, 372, 969, 972, 1312
GsaI CCCAGC 1 cut(s) 898
HaeIII GGCC 4 cut(s) 427, 479, 623, 1349
HgaI GACGC 1 cut(s) 1130
Hin1II CATG 7 cut(s) 452, 622, 886, 995, 1075, 1163, 1354
HincII GTYRAC 1 cut(s) 616
HindII GTYRAC 1 cut(s) 616
HindIII AAGCTT 1 cut(s) 14
HinfI GANTC 7 cut(s) 121, 129, 181, 594, 811, 1183, 1232
HphI GGTGA 2 cut(s) 253, 1129
Hpy166II GTNNAC 5 cut(s) 616, 845, 922, 1131, 1280
Hpy188I TCNGA 7 cut(s) 103, 255, 263, 490, 794, 1041, 1198
Hpy188III TCNNGA 7 cut(s) 23, 63, 932, 956, 1367, 1379, 1396
Hpy8I GTNNAC 5 cut(s) 616, 845, 922, 1131, 1280
Hpy99I CGWCG 1 cut(s) 129
HpyAV CCTTC 9 cut(s) 59, 208, 331, 438, 708, 880, 1069, 1301, 1376
HpyCH4III ACNGT 3 cut(s) 202, 1106, 1333
HpyCH4IV ACGT 1 cut(s) 1282
HpyCH4V TGCA 8 cut(s) 347, 527, 728, 805, 974, 1298, 1354, 1420
HpyF10VI GCNNNNNNNGC 3 cut(s) 217, 292, 326
HpyF3I CTNAG 2 cut(s) 508, 1197
HpySE526I ACGT 1 cut(s) 1282
Hsp92II CATG 7 cut(s) 452, 622, 886, 995, 1075, 1163, 1354
Ksp22I TGATCA 1 cut(s) 445
Kzo9I GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 4 cut(s) 208, 217, 280, 771
Lsp1109I GCAGC 6 cut(s) 295, 341, 358, 955, 958, 1323
LweI GCATC 5 cut(s) 691, 792, 983, 1173, 1407
MaeI CTAG 2 cut(s) 516, 686
MaeII ACGT 1 cut(s) 1282
MaeIII GTNAC 1 cut(s) 734
MalI GATC 7 cut(s) 252, 365, 394, 447, 989, 1002, 1365
MbiI CCGCTC 1 cut(s) 1126
MboI GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
MflI RGATCY 6 cut(s) 250, 363, 392, 987, 1000, 1363
MhlI GDGCHC 2 cut(s) 234, 1390
MlsI TGGCCA 1 cut(s) 623
MluCI AATT 7 cut(s) 87, 188, 402, 545, 927, 1424, 1431
MluNI TGGCCA 1 cut(s) 623
MlyI GAGTC 1 cut(s) 1226
MmeI TCCRAC 1 cut(s) 749
Mox20I TGGCCA 1 cut(s) 623
MroXI GAANNNNTTC 1 cut(s) 1374
MscI TGGCCA 1 cut(s) 623
MseI TTAA 6 cut(s) 192, 387, 656, 717, 852, 1061
Msp20I TGGCCA 1 cut(s) 623
MspA1I CMGCKG 2 cut(s) 286, 443
MspR9I CCNGG 2 cut(s) 1316, 1345
Mva1269I GAATGC 1 cut(s) 1048
MvaI CCWGG 2 cut(s) 1316, 1345
MwoI GCNNNNNNNGC 3 cut(s) 217, 292, 326
NcoI CCATGG 1 cut(s) 1159
NdeII GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
NlaIII CATG 7 cut(s) 452, 622, 886, 995, 1075, 1163, 1354
NlaIV GGNNCC 1 cut(s) 1365
NmeAIII GCCGAG 2 cut(s) 347, 1162
NmuCI GTSAC 1 cut(s) 734
NspV TTCGAA 1 cut(s) 152
PaqCI CACCTGC 1 cut(s) 286
PceI AGGCCT 1 cut(s) 479
PciSI GCTCTTC 1 cut(s) 222
PctI GAATGC 1 cut(s) 1048
PdmI GAANNNNTTC 1 cut(s) 1374
PfeI GAWTC 6 cut(s) 121, 129, 181, 594, 811, 1183
PkrI GCNGC 6 cut(s) 285, 331, 373, 970, 973, 1313
PleI GAGTC 1 cut(s) 1226
PpsI GAGTC 1 cut(s) 1226
Ppu21I YACGTR 1 cut(s) 1283
Psp124BI GAGCTC 1 cut(s) 234
Psp6I CCWGG 2 cut(s) 1314, 1343
PspFI CCCAGC 1 cut(s) 894
PspGI CCWGG 2 cut(s) 1314, 1343
PspN4I GGNNCC 1 cut(s) 1365
PspPI GGNCC 2 cut(s) 425, 1347
PstI CTGCAG 1 cut(s) 529
PstNI CAGNNNCTG 1 cut(s) 320
PsuI RGATCY 6 cut(s) 250, 363, 392, 987, 1000, 1363
PvuII CAGCTG 2 cut(s) 286, 443
RsaI GTAC 5 cut(s) 290, 750, 1103, 1132, 1281
RsaNI GTAC 5 cut(s) 289, 749, 1102, 1131, 1280
SacI GAGCTC 1 cut(s) 234
SapI GCTCTTC 1 cut(s) 222
SaqAI TTAA 6 cut(s) 192, 387, 656, 717, 852, 1061
SatI GCNGC 6 cut(s) 284, 330, 372, 969, 972, 1312
Sau3AI GATC 7 cut(s) 250, 363, 392, 445, 987, 1000, 1363
Sau96I GGNCC 2 cut(s) 425, 1347
ScaI AGTACT 1 cut(s) 1103
SchI GAGTC 1 cut(s) 1226
ScrFI CCNGG 2 cut(s) 1316, 1345
SduI GDGCHC 2 cut(s) 234, 1390
SfaNI GCATC 5 cut(s) 691, 792, 983, 1173, 1407
SfcI CTRYAG 1 cut(s) 525
SfuI TTCGAA 1 cut(s) 152
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 7 cut(s) 87, 188, 402, 545, 927, 1424, 1431
SseBI AGGCCT 1 cut(s) 479
SsiI CCGC 3 cut(s) 5, 1046, 1126
SspMI CTAG 2 cut(s) 516, 686
SstI GAGCTC 1 cut(s) 234
StuI AGGCCT 1 cut(s) 479
StyD4I CCNGG 2 cut(s) 1314, 1343
StyI CCWWGG 2 cut(s) 1159, 1358
TaaI ACNGT 3 cut(s) 202, 1106, 1333
TaiI ACGT 1 cut(s) 1285
TaqI TCGA 6 cut(s) 22, 64, 91, 127, 152, 569
TasI AATT 7 cut(s) 87, 188, 402, 545, 927, 1424, 1431
TatI WGTACW 3 cut(s) 288, 1101, 1130
TfiI GAWTC 6 cut(s) 121, 129, 181, 594, 811, 1183
Tru1I TTAA 6 cut(s) 192, 387, 656, 717, 852, 1061
Tru9I TTAA 6 cut(s) 192, 387, 656, 717, 852, 1061
TscAI CASTG 3 cut(s) 139, 838, 1338
TseFI GTSAC 1 cut(s) 734
TseI GCWGC 6 cut(s) 283, 329, 371, 968, 971, 1311
Tsp45I GTSAC 1 cut(s) 734
TspDTI ATGAA 7 cut(s) 474, 555, 578, 812, 899, 957, 1088
TspGWI ACGGA 1 cut(s) 293
TspRI CASTG 3 cut(s) 139, 838, 1338
XapI RAATTY 4 cut(s) 87, 545, 927, 1431
XmnI GAANNNNTTC 1 cut(s) 1374
XspI CTAG 2 cut(s) 516, 686
ZrmI AGTACT 1 cut(s) 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.