Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0015488

Physical Location & Seq

Genomic Coordinates Forward (+)

37147750 .. 37149942

Gene Structure 2193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0214200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGAGGAAGTGATTGGGGGCTTTGCCCGTAAGCTTGCGTTGACAGAGGCGGACGCGGTGGAGGTGGTTTTACCACAAAAGCAACAGAAGTCTCAACCTAATCGCTTTTTCCTTGTTGGAGAGCTGCTGACAAAGAAACAGTTCCGTATGGAATCCTTGATTAGCACTTTGCGAGACCTTTGGATTCCAGATGCGAGCCCGGATGATCGGTCTCGGTTGACGGTGTGTCAAATTGAAGGGAGTAGAAGGTTACTCTTTTCTTTCCCTTCCGTTTCGGATCTGAATTGGGTTCTTACAAGGGCGCCTTGGTCGTTTAAGAATGCTTTATTCGCTATAGCGGTTACAGATGGCTTGACTGATCCCCTCAAAGTCTCCATACAAACACAATTCTTTTGGATTCGTATTAGAGGCATTCCACCCCTGTACATGGATGAGGGGACTGGTCAGGGGATCGGTGAGGCGGTGGGGAGTTATGTCAGAACTTGGAAAGATAAGCATAGCAGCTGCTTAGGAAGGTTCCTCCGTATTCGTGTGGGGATCGATATCCATAAGTCTTTGAGCAAAGGGGTGTCCATTCCTGGGGCGGCTTGGTCCGGGAAGAAACTTTTTGATCTGGAGTACGAGAGGTTGCCTCACTTTTGTCTATTCTGTGGTCTTATCTCTCATACAGGCGGGGATTGTCCCCTTAGAGCATCAGGTGAGATCCCTGAACCTACCTACGATGTACTGTTGAATGCCGAAAGAAAATCGGCTTGGTTGGTTAAGCAAGAGGCATTCAGGGAGATGGAAGCAGCTAACTCTGGAGGTGGGACTCGGTTTGGGCTTCATCCGGCAAGACGTACAGGTTGGAAAATGATTGCTCCGGAGTTTCCGACCATTGGGTTAATTAGATCTAGAGAGGAGTGGGTTACGGACTGTACCCAACCGGACTCTCAGTCAGAGGAAGCAATGGAGGTTGAAGATGGCGGTAGGGACTCAGGGAGCCCGGAAGAGTCAGCCTCCAAGCGGCGGTGCTTGGCAGACAGACGACGGACGGCGGGTACGGGGGATGAGGTTCAACTGACGGAGGTACCCATTGTGGAATACACGGATTTCGCGGCGGCCTTGAATTCGATGACCGCTGGCACGCCGGCAGTCTCTGTGTCAGCTATGAATGTTATCCCTGCTGCACGAGTGCAGCATTCAAATCCGACATTCTTGGGAGTCGTCAACAATGATGACAGCATAGGGGTGGCTTTGTCTGCTGAGGTTACAGCTGAAGTTAACTATAAGCAGGTTGGGCCCATTGCTGGGGTAATTACTTCAATGGTACCGACGCAGAAAGCAAAGGTAAAAAACCAAGTGGGGAGTCAGAAGCGGGCCGTTCTGAACTCCGGGCTGGATAGGCCTCATGAACTGGATTCGTCCATGCATGCAGAGGGGGTGTCTTCTGAGCATGGGTCGAGTTCAAAAATGGTAGGTGTTACGTACATGCATGGGGAGGGGTTGTCTTGTGAGCATCGGATGAGTTCATTAAAGATGGGTGATTCGTGCATGCATGGGGAGGGGTTGTCTTGTGAGCATCGGATGAGTTCATTAAAGATGGGTGATTCGTGCATGCATGGGGAGGGGTTGTCTTGTGAGCATCGGATGAGTTCATTAAAGATGGGTGATTCGTGCATGCATGGGGAGGGGTTGTCTTGGGAGCATGGGATGAGTTCATTAAAGATGAGTGATACGTGCATGCATGGGGAGGGGTTGCCTTGTGTGCATGGGATGAGTTCATTAAAGATGGGTGATACGTGCATGCATGGGGAGGGGTTGCCTTGTGAGCATGGGATGAGTTCAAAAAGAGTGAATGGCTCATGCATGCATGGGAAGGGCATGGCTAGTGCGTCTGGGAAAAGTTTAAAGGGGGGAGACACTTGCCTACATGGGGTGGGGCCGTCTAGTGAGCATGGGATAAATTTGATGATGCATGGGGAAGGGTTACCGCATGCGCATGGGAATAAATTAAGCAAAGTGGGGGACACTCACACAAGCTTGCATGGGGAGGGGCTGTCGCGTGCGCTACGGAACTCCTTTACAAAAAAAGGGTACGCAGTTGGTCGACAAATCAGCCTCGTGGTGGCTAAAGTTCCGAAACCAAGTTCCGGGCGTGCTCAAAAGCGTCCTACCGTGATGGGTCCGGTTTTGGCCCATCACGAACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004601 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008379 GO:0009269 GO:0009414 GO:0009415 GO:0009628 GO:0009636 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0016209 GO:0016491 GO:0016684 GO:0021700 GO:0022414 GO:0022611 GO:0032501 GO:0032502 GO:0032504 GO:0042221 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0051920 GO:0055114 GO:0061458 GO:0070887 GO:0071695 GO:0097237 GO:0097437 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

1-cysPrx_C AhpC-TSA

Protein Analysis

730

Amino Acids

79.05

Weight (kDa)

7.38

Isoelectric Point (pI)

53.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48130
fragaria_vesca	FvH4_4g21120 FvH4_4g21120
malus_domestica	MD13G1144500.v1.1
prunus_persica	Prupe.1G109000_v2.0.a1
pyrus_communis	pycom13g12500
rosa_chinensis	RchiOBHm_Chr4g0426681
rosa_laevigata	RLG00000007285
rosa_multiflora	Rmu_sc0001821.1_g000016
rosa_roxburghii	Rroxscaffold_5G00368670
rosa_rugosa	Rorug04G0214200
rosa_samantha	Rh4AG269300 Rh4BG275600 Rh4CG290100 Rh4DG272600
rosa_wichuraiana	Rw4G023360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1980
Acc36I	ACCTGC	1 cut(s)	1264
Acc65I	GGTACC	2 cut(s)	1069, 1309
AccB1I	GGYRCC	3 cut(s)	301, 1069, 1309
AccI	GTMKAC	1 cut(s)	2089
AccII	CGCG	3 cut(s)	56, 1097, 2044
AccIII	TCCGGA	1 cut(s)	862
AclWI	GGATC	5 cut(s)	285, 353, 458, 545, 697
AcsI	RAATTY	2 cut(s)	1108, 1945
AcuI	CTGAAG	1 cut(s)	1278
AcyI	GRCGYC	1 cut(s)	302
AgsI	TTSAA	9 cut(s)	236, 733, 959, 1058, 1108, 1185, 1305, 1449, 1827
AhdI	GACNNNNNGTC	2 cut(s)	225, 934
AjnI	CCWGG	1 cut(s)	577
AjuI	GAANNNNNNNTTGG	2 cut(s)	736, 768
AluBI	AGCT	7 cut(s)	34, 124, 504, 794, 1148, 1256, 2022
AluI	AGCT	7 cut(s)	34, 124, 504, 794, 1148, 1256, 2022
Alw21I	GWGCWC	1 cut(s)	2143
Alw26I	GTCTC	6 cut(s)	96, 168, 216, 376, 1141, 1893
AlwI	GGATC	5 cut(s)	285, 353, 458, 545, 697
AlwNI	CAGNNNCTG	1 cut(s)	1139
Aor13HI	TCCGGA	1 cut(s)	862
AoxI	GGCC	6 cut(s)	1101, 1280, 1359, 1385, 1922, 2175
ApaI	GGGCCC	1 cut(s)	1284
ApeKI	GCWGC	6 cut(s)	124, 501, 504, 791, 1166, 1177
ApoI	RAATTY	2 cut(s)	1108, 1945
Asp700I	GAANNNNTTC	1 cut(s)	140
Asp718I	GGTACC	2 cut(s)	1069, 1309
AspLEI	GCGC	3 cut(s)	304, 1981, 2050
AspS9I	GGNCC	7 cut(s)	591, 1280, 1281, 1359, 1922, 2165, 2176
AsuC2I	CCSGG	5 cut(s)	200, 595, 986, 1375, 2134
AsuHPI	GGTGA	6 cut(s)	467, 710, 1535, 1598, 1661, 1787
AvaII	GGWCC	2 cut(s)	591, 2165
BaeGI	GKGCMC	1 cut(s)	1284
BaeI	ACNNNNGTAYC	2 cut(s)	1053, 1086
BanI	GGYRCC	3 cut(s)	301, 1069, 1309
BanII	GRGCYC	3 cut(s)	200, 986, 1284
BauI	CACGAG	2 cut(s)	1170, 2102
BbsI	GAAGAC	1 cut(s)	1419
Bbv12I	GWGCWC	1 cut(s)	2143
BbvCI	CCTCAGC	1 cut(s)	1245
BbvI	GCAGC	6 cut(s)	111, 491, 513, 803, 1153, 1189
BccI	CCATC	9 cut(s)	341, 778, 956, 1513, 1576, 1639, 1765, 2155, 2187
BceAI	ACGGC	3 cut(s)	1050, 1346, 1909
BciT130I	CCWGG	1 cut(s)	579
BcnI	CCSGG	5 cut(s)	200, 595, 986, 1375, 2134
BcoDI	GTCTC	6 cut(s)	96, 168, 216, 376, 1141, 1893
BfaI	CTAG	3 cut(s)	894, 1869, 1929
BfmI	CTRYAG	1 cut(s)	333
BfoI	RGCGCY	1 cut(s)	305
BfuAI	ACCTGC	1 cut(s)	1264
BglII	AGATCT	1 cut(s)	890
Bme1390I	CCNGG	6 cut(s)	200, 579, 595, 986, 1375, 2134
Bme18I	GGWCC	2 cut(s)	591, 2165
BmeRI	GACNNNNNGTC	2 cut(s)	225, 934
BmgT120I	GGNCC	7 cut(s)	591, 1280, 1281, 1359, 1922, 2165, 2176
BmiI	GGNNCC	8 cut(s)	303, 518, 983, 1071, 1282, 1311, 1923, 2166
BmrFI	CCNGG	6 cut(s)	200, 579, 595, 986, 1375, 2134
BmsI	GCATC	6 cut(s)	181, 701, 1507, 1570, 1633, 1944
BpiI	GAAGAC	1 cut(s)	1419
BplI	GAGNNNNNCTC	4 cut(s)	616, 648, 983, 1015
BpmI	CTGGAG	2 cut(s)	635, 822
Bpu10I	CCTNAGC	2 cut(s)	508, 1245
BpuMI	CCSGG	5 cut(s)	200, 595, 986, 1375, 2134
Bsa29I	ATCGAT	1 cut(s)	540
BsaAI	YACGTR	3 cut(s)	1467, 1719, 1782
BsaBI	GATNNNNATC	1 cut(s)	542
BsaHI	GRCGYC	1 cut(s)	302
BsaI	GGTCTC	2 cut(s)	168, 216
BsaJI	CCNNGG	2 cut(s)	305, 578
BsaWI	WCCGGW	3 cut(s)	862, 925, 2167
Bse118I	RCCGGY	1 cut(s)	1129
Bse1I	ACTGG	2 cut(s)	445, 1401
Bse3DI	GCAATG	2 cut(s)	954, 1284
Bse8I	GATNNNNATC	1 cut(s)	542
BseAI	TCCGGA	1 cut(s)	862
BseBI	CCWGG	1 cut(s)	579
BseCI	ATCGAT	1 cut(s)	540
BseDI	CCNNGG	2 cut(s)	305, 578
BseJI	GATNNNNATC	1 cut(s)	542
BseMI	GCAATG	2 cut(s)	954, 1284
BseMII	CTCAG	4 cut(s)	947, 990, 1236, 1422
BseNI	ACTGG	2 cut(s)	445, 1401
BseRI	GAGGAG	1 cut(s)	914
BseSI	GKGCMC	1 cut(s)	1284
BseXI	GCAGC	6 cut(s)	111, 491, 513, 803, 1153, 1189
BseYI	CCCAGC	1 cut(s)	1289
BsgI	GTGCAG	2 cut(s)	1152, 1196
Bsh1236I	CGCG	3 cut(s)	56, 1097, 2044
BshFI	GGCC	6 cut(s)	1103, 1282, 1361, 1387, 1924, 2177
BshNI	GGYRCC	3 cut(s)	301, 1069, 1309
BshVI	ATCGAT	1 cut(s)	540
BsiHKAI	GWGCWC	1 cut(s)	2143
BslFI	GGGAC	5 cut(s)	451, 666, 823, 986, 2021
BsmAI	GTCTC	6 cut(s)	96, 168, 216, 376, 1141, 1893
BsmFI	GGGAC	5 cut(s)	451, 666, 823, 986, 2021
BsmI	GAATGC	5 cut(s)	325, 411, 739, 773, 1180
BsnI	GGCC	6 cut(s)	1103, 1282, 1361, 1387, 1924, 2177
Bso31I	GGTCTC	2 cut(s)	168, 216
Bsp120I	GGGCCC	1 cut(s)	1280
Bsp1286I	GDGCHC	4 cut(s)	200, 986, 1284, 2143
Bsp13I	TCCGGA	1 cut(s)	862
Bsp1407I	TGTACA	1 cut(s)	423
Bsp143I	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
BspANI	GGCC	6 cut(s)	1103, 1282, 1361, 1387, 1924, 2177
BspCNI	CTCAG	4 cut(s)	946, 989, 1237, 1423
BspDI	ATCGAT	1 cut(s)	540
BspEI	TCCGGA	1 cut(s)	862
BspFNI	CGCG	3 cut(s)	56, 1097, 2044
BspHI	TCATGA	1 cut(s)	1390
BspLI	GGNNCC	8 cut(s)	303, 518, 983, 1071, 1282, 1311, 1923, 2166
BspMI	ACCTGC	1 cut(s)	1264
BspPI	GGATC	5 cut(s)	285, 353, 458, 545, 697
BspT107I	GGYRCC	3 cut(s)	301, 1069, 1309
BspTNI	GGTCTC	2 cut(s)	168, 216
BsrDI	GCAATG	2 cut(s)	954, 1284
BsrFI	RCCGGY	1 cut(s)	1129
BsrGI	TGTACA	1 cut(s)	423
BsrI	ACTGG	2 cut(s)	445, 1401
BssAI	RCCGGY	1 cut(s)	1129
BssECI	CCNNGG	2 cut(s)	305, 578
BssMI	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
BssNI	GRCGYC	1 cut(s)	302
BssSI	CACGAG	2 cut(s)	1170, 2102
BssT1I	CCWWGG	1 cut(s)	305
Bst2BI	CACGAG	2 cut(s)	1170, 2102
Bst2UI	CCWGG	1 cut(s)	579
Bst4CI	ACNGT	5 cut(s)	141, 223, 729, 917, 2158
Bst6I	CTCTTC	1 cut(s)	984
BstACI	GRCGYC	1 cut(s)	302
BstAUI	TGTACA	1 cut(s)	423
BstBAI	YACGTR	3 cut(s)	1467, 1719, 1782
BstDEI	CTNAG	6 cut(s)	508, 686, 933, 976, 1245, 1431
BstEII	GGTNACC	1 cut(s)	1968
BstFNI	CGCG	3 cut(s)	56, 1097, 2044
BstH2I	RGCGCY	1 cut(s)	305
BstHHI	GCGC	3 cut(s)	304, 1981, 2050
BstKTI	GATC	8 cut(s)	208, 280, 361, 453, 540, 613, 705, 893
BstMAI	GTCTC	6 cut(s)	96, 168, 216, 376, 1141, 1893
BstMBI	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
BstMWI	GCNNNNNNNGC	6 cut(s)	329, 1241, 1279, 1384, 1747, 1810
BstNI	CCWGG	1 cut(s)	579
BstNSI	RCATGY	9 cut(s)	1415, 1474, 1537, 1600, 1663, 1726, 1789, 1852, 1979
BstPI	GGTNACC	1 cut(s)	1968
BstSCI	CCNGG	6 cut(s)	198, 577, 593, 984, 1373, 2132
BstSFI	CTRYAG	1 cut(s)	333
BstSLI	GKGCMC	1 cut(s)	1284
BstSNI	TACGTA	1 cut(s)	1467
BstUI	CGCG	3 cut(s)	56, 1097, 2044
BstV1I	GCAGC	6 cut(s)	111, 491, 513, 803, 1153, 1189
BstV2I	GAAGAC	1 cut(s)	1419
BstX2I	RGATCY	3 cut(s)	277, 702, 890
BstYI	RGATCY	3 cut(s)	277, 702, 890
Bsu15I	ATCGAT	1 cut(s)	540
BsuRI	GGCC	6 cut(s)	1103, 1282, 1361, 1387, 1924, 2177
BsuTUI	ATCGAT	1 cut(s)	540
BveI	ACCTGC	1 cut(s)	1264
CaiI	CAGNNNCTG	1 cut(s)	1139
CciI	TCATGA	1 cut(s)	1390
CfoI	GCGC	3 cut(s)	304, 1981, 2050
Cfr10I	RCCGGY	1 cut(s)	1129
Cfr13I	GGNCC	7 cut(s)	591, 1280, 1281, 1359, 1922, 2165, 2176
ClaI	ATCGAT	1 cut(s)	540
CseI	GACGC	4 cut(s)	62, 1324, 1863, 2138
DdeI	CTNAG	6 cut(s)	508, 686, 933, 976, 1245, 1431
DinI	GGCGCC	1 cut(s)	303
DpnI	GATC	8 cut(s)	207, 279, 360, 452, 539, 612, 704, 892
DpnII	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
DraI	TTTAAA	1 cut(s)	1890
DriI	GACNNNNNGTC	2 cut(s)	225, 934
Eam1104I	CTCTTC	1 cut(s)	984
Eam1105I	GACNNNNNGTC	2 cut(s)	225, 934
EarI	CTCTTC	1 cut(s)	984
EciI	GGCGGA	1 cut(s)	65
Eco105I	TACGTA	1 cut(s)	1467
Eco130I	CCWWGG	1 cut(s)	305
Eco147I	AGGCCT	1 cut(s)	1387
Eco24I	GRGCYC	3 cut(s)	200, 986, 1284
Eco31I	GGTCTC	2 cut(s)	168, 216
Eco32I	GATATC	1 cut(s)	544
Eco47I	GGWCC	2 cut(s)	591, 2165
Eco57I	CTGAAG	1 cut(s)	1278
Eco91I	GGTNACC	1 cut(s)	1968
EcoO65I	GGTNACC	1 cut(s)	1968
EcoRI	GAATTC	1 cut(s)	1108
EcoRII	CCWGG	1 cut(s)	577
EcoRV	GATATC	1 cut(s)	544
EcoT14I	CCWWGG	1 cut(s)	305
EcoT38I	GRGCYC	3 cut(s)	200, 986, 1284
EgeI	GGCGCC	1 cut(s)	303
EheI	GGCGCC	1 cut(s)	303
ErhI	CCWWGG	1 cut(s)	305
FalI	AAGNNNNNCTT	2 cut(s)	289, 321
FaqI	GGGAC	5 cut(s)	451, 666, 823, 986, 2021
FauI	CCCGC	3 cut(s)	665, 1030, 1350
FblI	GTMKAC	1 cut(s)	2089
FriOI	GRGCYC	3 cut(s)	200, 986, 1284
FspAI	RTGCGCAY	1 cut(s)	1980
FspBI	CTAG	3 cut(s)	894, 1869, 1929
FspI	TGCGCA	1 cut(s)	1980
GlaI	GCGC	3 cut(s)	303, 1980, 2049
GsaI	CCCAGC	1 cut(s)	1293
GsuI	CTGGAG	2 cut(s)	635, 822
HaeII	RGCGCY	1 cut(s)	305
HaeIII	GGCC	6 cut(s)	1103, 1282, 1361, 1387, 1924, 2177
HgaI	GACGC	4 cut(s)	62, 1324, 1863, 2138
HhaI	GCGC	3 cut(s)	304, 1981, 2050
Hin1I	GRCGYC	1 cut(s)	302
Hin6I	GCGC	3 cut(s)	302, 1979, 2048
HinP1I	GCGC	3 cut(s)	302, 1979, 2048
HincII	GTYRAC	5 cut(s)	42, 219, 1210, 1264, 2090
HindII	GTYRAC	5 cut(s)	42, 219, 1210, 1264, 2090
HindIII	AAGCTT	2 cut(s)	32, 2020
HpaI	GTTAAC	1 cut(s)	1264
HphI	GGTGA	6 cut(s)	467, 710, 1535, 1598, 1661, 1787
Hpy166II	GTNNAC	5 cut(s)	42, 219, 1210, 1264, 2090
Hpy188III	TCNNGA	7 cut(s)	188, 614, 801, 863, 894, 1391, 2183
Hpy8I	GTNNAC	5 cut(s)	42, 219, 1210, 1264, 2090
Hpy99I	CGWCG	2 cut(s)	1032, 1318
HpyAV	CCTTC	6 cut(s)	230, 240, 276, 507, 1852, 1958
HpyCH4III	ACNGT	5 cut(s)	141, 223, 729, 917, 2158
HpyCH4IV	ACGT	4 cut(s)	838, 1466, 1718, 1781
HpyF10VI	GCNNNNNNNGC	6 cut(s)	329, 1241, 1279, 1384, 1747, 1810
HpyF3I	CTNAG	6 cut(s)	508, 686, 933, 976, 1245, 1431
HpySE526I	ACGT	4 cut(s)	838, 1466, 1718, 1781
Hsp92I	GRCGYC	1 cut(s)	302
HspAI	GCGC	3 cut(s)	302, 1979, 2048
KasI	GGCGCC	1 cut(s)	301
Kpn2I	TCCGGA	1 cut(s)	862
KpnI	GGTACC	2 cut(s)	1073, 1313
KroI	GCCGGC	1 cut(s)	1129
KroNI	GCCGGC	1 cut(s)	1131
KspAI	GTTAAC	1 cut(s)	1264
Kzo9I	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
LmnI	GCTCC	3 cut(s)	865, 981, 1684
Lsp1109I	GCAGC	6 cut(s)	111, 491, 513, 803, 1153, 1189
LweI	GCATC	6 cut(s)	181, 701, 1507, 1570, 1633, 1944
MaeI	CTAG	3 cut(s)	894, 1869, 1929
MaeII	ACGT	4 cut(s)	838, 1466, 1718, 1781
MaeIII	GTNAC	6 cut(s)	249, 340, 907, 1249, 1462, 1968
MalI	GATC	8 cut(s)	207, 279, 360, 452, 539, 612, 704, 892
MboI	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
MboII	GAAGA	4 cut(s)	610, 971, 1001, 1419
MflI	RGATCY	3 cut(s)	277, 702, 890
MhlI	GDGCHC	4 cut(s)	200, 986, 1284, 2143
MluCI	AATT	8 cut(s)	231, 283, 386, 885, 1108, 1296, 1945, 1991
Mly113I	GGCGCC	1 cut(s)	302
MlyI	GAGTC	6 cut(s)	805, 923, 968, 1001, 1212, 1357
MmeI	TCCRAC	4 cut(s)	97, 827, 896, 1214
MroI	TCCGGA	1 cut(s)	862
MroNI	GCCGGC	1 cut(s)	1129
MroXI	GAANNNNTTC	1 cut(s)	140
MslI	CAYNNNNRTG	2 cut(s)	1229, 1980
MspA1I	CMGCKG	3 cut(s)	504, 1121, 1256
MspR9I	CCNGG	6 cut(s)	200, 579, 595, 986, 1375, 2134
Mva1269I	GAATGC	5 cut(s)	325, 411, 739, 773, 1180
MvaI	CCWGG	1 cut(s)	579
MvnI	CGCG	3 cut(s)	56, 1097, 2044
MwoI	GCNNNNNNNGC	6 cut(s)	329, 1241, 1279, 1384, 1747, 1810
NaeI	GCCGGC	1 cut(s)	1131
NarI	GGCGCC	1 cut(s)	302
NciI	CCSGG	5 cut(s)	200, 595, 986, 1375, 2134
NdeII	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
NgoMIV	GCCGGC	1 cut(s)	1129
NlaIV	GGNNCC	8 cut(s)	303, 518, 983, 1071, 1282, 1311, 1923, 2166
NsbI	TGCGCA	1 cut(s)	1980
NspI	RCATGY	9 cut(s)	1415, 1474, 1537, 1600, 1663, 1726, 1789, 1852, 1979
PaeI	GCATGC	8 cut(s)	1415, 1537, 1600, 1663, 1726, 1789, 1852, 1979
PagI	TCATGA	1 cut(s)	1390
PceI	AGGCCT	1 cut(s)	1387
PctI	GAATGC	5 cut(s)	325, 411, 739, 773, 1180
PdiI	GCCGGC	1 cut(s)	1131
PdmI	GAANNNNTTC	1 cut(s)	140
PfeI	GAWTC	7 cut(s)	152, 184, 397, 1400, 1526, 1589, 1652
PfoI	TCCNGGA	1 cut(s)	593
PleI	GAGTC	6 cut(s)	805, 923, 968, 1000, 1211, 1356
PluTI	GGCGCC	1 cut(s)	305
PpsI	GAGTC	6 cut(s)	805, 923, 968, 1000, 1211, 1356
Ppu21I	YACGTR	3 cut(s)	1467, 1719, 1782
Psp6I	CCWGG	1 cut(s)	577
PspEI	GGTNACC	1 cut(s)	1968
PspFI	CCCAGC	1 cut(s)	1289
PspGI	CCWGG	1 cut(s)	577
PspN4I	GGNNCC	8 cut(s)	303, 518, 983, 1071, 1282, 1311, 1923, 2166
PspOMI	GGGCCC	1 cut(s)	1280
PspPI	GGNCC	7 cut(s)	591, 1280, 1281, 1359, 1922, 2165, 2176
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	3 cut(s)	277, 702, 890
PvuII	CAGCTG	2 cut(s)	504, 1256
RseI	CAYNNNNRTG	2 cut(s)	1229, 1980
SalI	GTCGAC	1 cut(s)	2088
Sau3AI	GATC	8 cut(s)	205, 277, 358, 450, 537, 610, 702, 890
Sau96I	GGNCC	7 cut(s)	591, 1280, 1281, 1359, 1922, 2165, 2176
SchI	GAGTC	6 cut(s)	805, 923, 968, 1001, 1212, 1357
ScrFI	CCNGG	6 cut(s)	200, 579, 595, 986, 1375, 2134
SduI	GDGCHC	4 cut(s)	200, 986, 1284, 2143
SfaNI	GCATC	6 cut(s)	181, 701, 1507, 1570, 1633, 1944
SfcI	CTRYAG	1 cut(s)	333
SfoI	GGCGCC	1 cut(s)	303
SinI	GGWCC	2 cut(s)	591, 2165
SmiMI	CAYNNNNRTG	2 cut(s)	1229, 1980
SnaBI	TACGTA	1 cut(s)	1467
SphI	GCATGC	8 cut(s)	1415, 1537, 1600, 1663, 1726, 1789, 1852, 1979
Sse9I	AATT	8 cut(s)	231, 283, 386, 885, 1108, 1296, 1945, 1991
SseBI	AGGCCT	1 cut(s)	1387
SspDI	GGCGCC	1 cut(s)	301
SspMI	CTAG	3 cut(s)	894, 1869, 1929
StuI	AGGCCT	1 cut(s)	1387
StyD4I	CCNGG	6 cut(s)	198, 577, 593, 984, 1373, 2132
StyI	CCWWGG	1 cut(s)	305
TaaI	ACNGT	5 cut(s)	141, 223, 729, 917, 2158
TaiI	ACGT	4 cut(s)	841, 1469, 1721, 1784
TaqI	TCGA	4 cut(s)	540, 1112, 1442, 2089
TaqII	GACCGA	1 cut(s)	198
TasI	AATT	8 cut(s)	231, 283, 386, 885, 1108, 1296, 1945, 1991
TatI	WGTACW	2 cut(s)	423, 724
TauI	GCSGC	4 cut(s)	587, 1009, 1100, 1103
TfiI	GAWTC	7 cut(s)	152, 184, 397, 1400, 1526, 1589, 1652
TseI	GCWGC	6 cut(s)	124, 501, 504, 791, 1166, 1177
TspDTI	ATGAA	8 cut(s)	815, 1166, 1407, 1500, 1563, 1626, 1689, 1752
TspGWI	ACGGA	8 cut(s)	134, 259, 512, 926, 1045, 1079, 1103, 2068
VpaK11BI	GGWCC	2 cut(s)	591, 2165
XapI	RAATTY	2 cut(s)	1108, 1945
XbaI	TCTAGA	1 cut(s)	893
XceI	RCATGY	9 cut(s)	1415, 1474, 1537, 1600, 1663, 1726, 1789, 1852, 1979
XmiI	GTMKAC	1 cut(s)	2089
XmnI	GAANNNNTTC	1 cut(s)	140
XspI	CTAG	3 cut(s)	894, 1869, 1929

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.