Rorug04G0324200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0015491
Physical Location & Seq
Forward (+)
49928438 .. 49930529
2092 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0324200.1

Sequence Viewer

Length: 1653 bp
ATGGGAACATTAGTGCCGAGTTCAGCCCAAGATCTGCAGGAACATATATTCCGAAGCCAATTGCCCGCTGTCCAGGTGCCTGAAAACCTCACATTGCCAGAATTTGTGCTCAAAGATGCCGAGTTGTATGCTGACAATGTTGCCTTTGTGGAGGCTGTGACTGGAAAGAAAATCACTTACCGTGAGGTGGTTAGAGACACCGGTAGGTTTGCCAAGGCCTTAAGGTCTCTAGGCCTTAGAAAGGGGCATGTGGTCATTGTTGTTCTTCCCAATGTAGCTGAGTATGCCATTGTTGCTTTGGGAATAATGGCTGCTGGTGGTGTGTTTTCGGGTGCAAACCCTGCGGGGCATGCATCCGAAATCAAAAAACAGGTGGTTGCTGCTGATGCCAAGATAATTGTGACAAATGGCGCTAGCTATGAAAAGGTAAAAGCTTTCGGGGTACCAGTAATTGCAATCGGTGAGGAGAGTATTGAAGGTGCTATGAATTGGAACAACTTGCTTGAAGCAGCAGACCGTGCCGGAGCTAATATCTATCAGGAGAAAGTCCAACAGACTGATCTATGTGCTCTTCCCTTCTCGTCGGGCACAACAGGACTATCCAAAGGTGTAATGCTGACTCACCGCAATCTTGTAGCTAACCTCAGCTCCACACTCTTTGGAGTAACGCCAGAAATGATAGGAAAAGTCACTGTACTAGGCCTAATTCCCTTCTTCCACATCTATGGGATCACCGGAATATGTTGTGCTACGCTTAGAAACAAAGGGAAAGTTGTGGTAATGGGAAGATACGAACTTAGGACCTTTCTGAACGCACTGATCTCACAAGAGGTCACGTTTGCCCCCATTGTGCCACCGATCATTTTGAACTTAGTGAAGCATCCAATAGTGGATGAATTCGATCTAAGCAAGCTCAAACTCCAGGCTGTTATGACTGCAGCTGCTCCACTTGCGCCGGATCTCCTCAAAGCATTCGAAAGCAAGTTCCCTGGAGTCCAAGTCCAAGAGGCATATGGACTGACTGAGCATAGCTGCATTACTCTGACTCATGCCGGACAGGGTTTTAAGGCAAAGAAAAACTCAGTTGGGTTTATTCTCCCAAACATGGAAGTTAAATTCATCGATCCTGAAACTGGTAGATCACTCCCAAGAAACACCCCTGGTGAAATTTGTGTGTTGAGTCAATGCACCATGCAAGGTTACTACAACAATGAAGAGGAGACTATGAGGACCATCGACAAGAATGGTTGGCTTCACACTGGTGACATTGGCTACATTGATGATGATGACAACGTCTTCATTGTCGATCGCATCAAGGAATTGATCAAATTCAAAGGTTTCCAAGTAGCTCCTGCTGAACTTGAGGCCATCCTTCTGACTCATCCCTCAGTCGAAGACGTAGCAGTAGTCCCACTGCCAGATGAAGAAGCTGGGGAAATACCAGCAGCATGTGTTGTGAAGGCAGCCGGTGCAAAAGAGAGTGAAGAAGACATAATCAACTATGTGGCCTCAAATGTTGCACAATACAAGAAAGTGAGAGTGGTGCACTTTGTGGACACCATTCCGAAATCACCCTCTGGAAAAATCATGAGGAGGCTTGTGAAGGACACAATGATAGAAAAGATCAAGGCATCCAAGCTCAGCAGCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

550

Amino Acids

59.63

Weight (kDa)

6.18

Isoelectric Point (pI)

33.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 39 - 402 2.4e-78 AMP-binding enzyme
AMP-binding_C PF13193 453 - 528 2.9e-18 AMP-binding enzyme C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015491)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26920 AT1G69760
malus_domestica MD13G1074000.v1.1 MD16G1075200.v1.1
prunus_persica Prupe.1G272000_v2.0.a1
pyrus_communis pycom16g06530
rosa_chinensis RchiOBHm_Chr4g0440081
rosa_laevigata RLG00000006207
rosa_multiflora Rmu_sc0001685.1_g000006
rosa_roxburghii Rroxscaffold_5G00381020
rosa_rugosa Rorug04G0324200
rosa_samantha Rh4AG374900 Rh4BG387200 Rh4CG401700 Rh4DG381500
rosa_wichuraiana Rw4G032070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 442
AccB1I GGYRCC 2 cut(s) 76, 442
AciI CCGC 3 cut(s) 66, 344, 625
AclWI GGATC 3 cut(s) 737, 966, 1118
AcsI RAATTY 5 cut(s) 101, 896, 1115, 1167, 1328
AdeI CACNNNGTG 1 cut(s) 1552
AfaI GTAC 2 cut(s) 444, 696
AfiI CCNNNNNNNGG 4 cut(s) 187, 241, 1105, 1133
AflII CTTAAG 1 cut(s) 220
AgeI ACCGGT 1 cut(s) 200
AgsI TTSAA 4 cut(s) 476, 506, 868, 1333
AjnI CCWGG 4 cut(s) 72, 921, 988, 1159
AleI CACNNNNGTG 1 cut(s) 1260
AloI GAACNNNNNNTCC 2 cut(s) 33, 65
Alw21I GWGCWC 3 cut(s) 111, 571, 1548
Alw26I GTCTC 3 cut(s) 189, 231, 1214
Alw44I GTGCAC 1 cut(s) 1544
AlwI GGATC 3 cut(s) 737, 966, 1118
AoxI GGCC 5 cut(s) 216, 232, 700, 1365, 1506
ApaLI GTGCAC 1 cut(s) 1544
ApeKI GCWGC 9 cut(s) 311, 380, 509, 938, 941, 1032, 1445, 1463, 1644
ApoI RAATTY 5 cut(s) 101, 896, 1115, 1167, 1328
AsiGI ACCGGT 1 cut(s) 200
Asp718I GGTACC 1 cut(s) 442
AspLEI GCGC 2 cut(s) 413, 955
AspS9I GGNCC 2 cut(s) 801, 1230
AsuHPI GGTGA 6 cut(s) 473, 614, 724, 1175, 1274, 1563
AsuII TTCGAA 1 cut(s) 975
AsuNHI GCTAGC 1 cut(s) 413
AvaII GGWCC 2 cut(s) 801, 1230
BaeGI GKGCMC 2 cut(s) 590, 1548
BanI GGYRCC 2 cut(s) 76, 442
BbsI GAAGAC 3 cut(s) 1288, 1401, 1494
Bbv12I GWGCWC 3 cut(s) 111, 571, 1548
BbvCI CCTCAGC 1 cut(s) 644
BbvI GCAGC 8 cut(s) 298, 367, 521, 928, 950, 1019, 1457, 1475
BccI CCATC 2 cut(s) 1241, 1376
BcgI CGANNNNNNTGC 2 cut(s) 110, 144
BciT130I CCWGG 4 cut(s) 74, 923, 990, 1161
BclI TGATCA 1 cut(s) 1323
BcoDI GTCTC 3 cut(s) 189, 231, 1214
BfaI CTAG 3 cut(s) 230, 414, 698
BfmI CTRYAG 2 cut(s) 35, 936
BfoI RGCGCY 1 cut(s) 414
BfrI CTTAAG 1 cut(s) 220
BglII AGATCT 1 cut(s) 31
BisI GCNGC 9 cut(s) 312, 381, 510, 939, 942, 1033, 1446, 1464, 1645
BlpI GCTNAGC 1 cut(s) 1640
BlsI GCNGC 9 cut(s) 313, 382, 511, 940, 943, 1034, 1447, 1465, 1646
Bme1390I CCNGG 4 cut(s) 74, 923, 990, 1161
Bme18I GGWCC 2 cut(s) 801, 1230
BmgT120I GGNCC 2 cut(s) 801, 1230
BmiI GGNNCC 2 cut(s) 78, 444
BmrFI CCNGG 4 cut(s) 74, 923, 990, 1161
BmsI GCATC 6 cut(s) 106, 362, 376, 889, 1320, 1640
BmtI GCTAGC 1 cut(s) 417
BpiI GAAGAC 3 cut(s) 1288, 1401, 1494
BpmI CTGGAG 2 cut(s) 905, 1011
Bpu10I CCTNAGC 1 cut(s) 644
Bpu1102I GCTNAGC 1 cut(s) 1640
Bpu14I TTCGAA 1 cut(s) 975
BpuEI CTTGAG 1 cut(s) 1382
Bsa29I ATCGAT 1 cut(s) 1122
BsaI GGTCTC 1 cut(s) 231
BsaJI CCNNGG 3 cut(s) 213, 988, 1159
BsaWI WCCGGW 2 cut(s) 200, 734
BsaXI ACNNNNNCTCC 4 cut(s) 632, 662, 984, 1014
Bsc4I CCNNNNNNNGG 4 cut(s) 187, 241, 1105, 1133
Bse118I RCCGGY 2 cut(s) 200, 1466
Bse1I ACTGG 4 cut(s) 166, 446, 1138, 1264
Bse3DI GCAATG 1 cut(s) 92
BseBI CCWGG 4 cut(s) 74, 923, 990, 1161
BseCI ATCGAT 1 cut(s) 1122
BseDI CCNNGG 3 cut(s) 213, 988, 1159
BseGI GGATG 6 cut(s) 353, 880, 898, 1368, 1381, 1631
BseLI CCNNNNNNNGG 4 cut(s) 187, 241, 1105, 1133
BseMI GCAATG 1 cut(s) 92
BseMII CTCAG 5 cut(s) 270, 658, 1014, 1095, 1401
BseNI ACTGG 4 cut(s) 166, 446, 1138, 1264
BseRI GAGGAG 4 cut(s) 479, 953, 1232, 1606
BseSI GKGCMC 2 cut(s) 590, 1548
BseXI GCAGC 8 cut(s) 298, 367, 521, 928, 950, 1019, 1457, 1475
BseYI CCCAGC 1 cut(s) 1430
Bsh1285I CGRYCG 1 cut(s) 1309
BshFI GGCC 5 cut(s) 218, 234, 702, 1367, 1508
BshNI GGYRCC 2 cut(s) 76, 442
BshTI ACCGGT 1 cut(s) 200
BshVI ATCGAT 1 cut(s) 1122
BsiEI CGRYCG 1 cut(s) 1309
BsiHKAI GWGCWC 3 cut(s) 111, 571, 1548
BsiSI CCGG 6 cut(s) 201, 522, 735, 956, 1053, 1467
BslFI GGGAC 1 cut(s) 1394
BslI CCNNNNNNNGG 4 cut(s) 187, 241, 1105, 1133
BsmAI GTCTC 3 cut(s) 189, 231, 1214
BsmFI GGGAC 1 cut(s) 1394
BsmI GAATGC 1 cut(s) 971
BsnI GGCC 5 cut(s) 218, 234, 702, 1367, 1508
Bso31I GGTCTC 1 cut(s) 231
Bsp119I TTCGAA 1 cut(s) 975
Bsp1286I GDGCHC 4 cut(s) 111, 571, 590, 1548
Bsp1720I GCTNAGC 1 cut(s) 1640
BspACI CCGC 3 cut(s) 66, 344, 625
BspANI GGCC 5 cut(s) 218, 234, 702, 1367, 1508
BspCNI CTCAG 6 cut(s) 271, 657, 1015, 1094, 1400, 1653
BspDI ATCGAT 1 cut(s) 1122
BspHI TCATGA 1 cut(s) 1587
BspLI GGNNCC 2 cut(s) 78, 444
BspMAI CTGCAG 2 cut(s) 39, 940
BspOI GCTAGC 1 cut(s) 417
BspPI GGATC 3 cut(s) 737, 966, 1118
BspQI GCTCTTC 1 cut(s) 576
BspT104I TTCGAA 1 cut(s) 975
BspT107I GGYRCC 2 cut(s) 76, 442
BspTI CTTAAG 1 cut(s) 220
BspTNI GGTCTC 1 cut(s) 231
BsrDI GCAATG 1 cut(s) 92
BsrFI RCCGGY 2 cut(s) 200, 1466
BsrI ACTGG 4 cut(s) 166, 446, 1138, 1264
BssAI RCCGGY 2 cut(s) 200, 1466
BssECI CCNNGG 3 cut(s) 213, 988, 1159
BssT1I CCWWGG 1 cut(s) 213
Bst2UI CCWGG 4 cut(s) 74, 923, 990, 1161
Bst4CI ACNGT 3 cut(s) 182, 518, 694
Bst6I CTCTTC 2 cut(s) 576, 1209
BstAFI CTTAAG 1 cut(s) 220
BstAPI GCANNNNNTGC 3 cut(s) 341, 518, 1469
BstBI TTCGAA 1 cut(s) 975
BstC8I GCNNGC 4 cut(s) 66, 351, 415, 911
BstENI CCTNNNNNAGG 1 cut(s) 239
BstF5I GGATG 6 cut(s) 353, 880, 898, 1368, 1381, 1631
BstH2I RGCGCY 1 cut(s) 414
BstHHI GCGC 2 cut(s) 413, 955
BstMAI GTCTC 3 cut(s) 189, 231, 1214
BstMCI CGRYCG 1 cut(s) 1309
BstMWI GCNNNNNNNGC 8 cut(s) 284, 293, 341, 350, 386, 518, 950, 1469
BstNI CCWGG 4 cut(s) 74, 923, 990, 1161
BstNSI RCATGY 3 cut(s) 251, 353, 1452
BstSCI CCNGG 4 cut(s) 72, 921, 988, 1159
BstSFI CTRYAG 2 cut(s) 35, 936
BstSLI GKGCMC 2 cut(s) 590, 1548
BstV1I GCAGC 8 cut(s) 298, 367, 521, 928, 950, 1019, 1457, 1475
BstV2I GAAGAC 3 cut(s) 1288, 1401, 1494
BstX2I RGATCY 2 cut(s) 31, 958
BstXI CCANNNNNNTGG 1 cut(s) 725
BstYI RGATCY 2 cut(s) 31, 958
Bsu15I ATCGAT 1 cut(s) 1122
BsuRI GGCC 5 cut(s) 218, 234, 702, 1367, 1508
BsuTUI ATCGAT 1 cut(s) 1122
BtsCI GGATG 6 cut(s) 353, 880, 898, 1368, 1381, 1631
BtsI GCAGTG 1 cut(s) 1412
BtsIMutI CAGTG 4 cut(s) 690, 815, 1257, 1412
Cac8I GCNNGC 4 cut(s) 66, 351, 415, 911
CciI TCATGA 1 cut(s) 1587
CfoI GCGC 2 cut(s) 413, 955
Cfr10I RCCGGY 2 cut(s) 200, 1466
Cfr13I GGNCC 2 cut(s) 801, 1230
ClaI ATCGAT 1 cut(s) 1122
Csp6I GTAC 2 cut(s) 443, 695
CspAI ACCGGT 1 cut(s) 200
CspCI CAANNNNNGTGG 2 cut(s) 640, 675
CviAII CATG 7 cut(s) 248, 350, 1049, 1105, 1192, 1449, 1588
CviQI GTAC 2 cut(s) 443, 695
DraIII CACNNNGTG 1 cut(s) 1552
Eam1104I CTCTTC 2 cut(s) 576, 1209
EarI CTCTTC 2 cut(s) 576, 1209
Eco130I CCWWGG 1 cut(s) 213
Eco147I AGGCCT 3 cut(s) 218, 234, 702
Eco31I GGTCTC 1 cut(s) 231
Eco47I GGWCC 2 cut(s) 801, 1230
EcoNI CCTNNNNNAGG 1 cut(s) 239
EcoO109I RGGNCCY 1 cut(s) 801
EcoRI GAATTC 1 cut(s) 896
EcoRII CCWGG 4 cut(s) 72, 921, 988, 1159
EcoT14I CCWWGG 1 cut(s) 213
EcoT22I ATGCAT 1 cut(s) 355
ErhI CCWWGG 1 cut(s) 213
FaeI CATG 7 cut(s) 251, 353, 1052, 1108, 1195, 1452, 1591
FaqI GGGAC 1 cut(s) 1394
FatI CATG 7 cut(s) 247, 349, 1048, 1104, 1191, 1448, 1587
FauI CCCGC 2 cut(s) 73, 337
FauNDI CATATG 1 cut(s) 1012
FbaI TGATCA 1 cut(s) 1323
Fnu4HI GCNGC 9 cut(s) 312, 381, 510, 939, 942, 1033, 1446, 1464, 1645
FokI GGATG 6 cut(s) 340, 867, 905, 1355, 1368, 1618
Fsp4HI GCNGC 9 cut(s) 312, 381, 510, 939, 942, 1033, 1446, 1464, 1645
FspBI CTAG 3 cut(s) 230, 414, 698
GlaI GCGC 2 cut(s) 412, 954
GluI GCNGC 9 cut(s) 312, 381, 510, 939, 942, 1033, 1446, 1464, 1645
GsaI CCCAGC 1 cut(s) 1434
GsuI CTGGAG 2 cut(s) 905, 1011
HaeII RGCGCY 1 cut(s) 414
HaeIII GGCC 5 cut(s) 218, 234, 702, 1367, 1508
HapII CCGG 6 cut(s) 201, 522, 735, 956, 1053, 1467
HhaI GCGC 2 cut(s) 413, 955
Hin1II CATG 7 cut(s) 251, 353, 1052, 1108, 1195, 1452, 1591
Hin6I GCGC 2 cut(s) 411, 953
HinP1I GCGC 2 cut(s) 411, 953
HindIII AAGCTT 1 cut(s) 432
HinfI GANTC 5 cut(s) 619, 993, 1045, 1180, 1378
HpaII CCGG 6 cut(s) 201, 522, 735, 956, 1053, 1467
HphI GGTGA 6 cut(s) 473, 614, 724, 1175, 1274, 1563
Hpy166II GTNNAC 2 cut(s) 1546, 1555
Hpy188I TCNGA 6 cut(s) 53, 358, 810, 1044, 1377, 1566
Hpy188III TCNNGA 4 cut(s) 539, 1127, 1578, 1588
Hpy8I GTNNAC 2 cut(s) 1546, 1555
Hpy99I CGWCG 1 cut(s) 586
HpyAV CCTTC 6 cut(s) 470, 586, 721, 1382, 1453, 1597
HpyCH4III ACNGT 3 cut(s) 182, 518, 694
HpyCH4IV ACGT 3 cut(s) 836, 1293, 1398
HpyF10VI GCNNNNNNNGC 8 cut(s) 284, 293, 341, 350, 386, 518, 950, 1469
HpySE526I ACGT 3 cut(s) 836, 1293, 1398
Hsp92II CATG 7 cut(s) 251, 353, 1052, 1108, 1195, 1452, 1591
HspAI GCGC 2 cut(s) 411, 953
KpnI GGTACC 1 cut(s) 446
Ksp22I TGATCA 1 cut(s) 1323
LguI GCTCTTC 1 cut(s) 576
LmnI GCTCC 4 cut(s) 524, 653, 949, 1354
Lsp1109I GCAGC 8 cut(s) 298, 367, 521, 928, 950, 1019, 1457, 1475
LweI GCATC 6 cut(s) 106, 362, 376, 889, 1320, 1640
MaeI CTAG 3 cut(s) 230, 414, 698
MaeII ACGT 3 cut(s) 836, 1293, 1398
MaeIII GTNAC 7 cut(s) 157, 400, 664, 688, 832, 1199, 1262
MfeI CAATTG 1 cut(s) 59
MflI RGATCY 2 cut(s) 31, 958
MhlI GDGCHC 4 cut(s) 111, 571, 590, 1548
MlyI GAGTC 5 cut(s) 613, 1002, 1039, 1189, 1372
MmeI TCCRAC 1 cut(s) 574
Mph1103I ATGCAT 1 cut(s) 355
MseI TTAA 4 cut(s) 221, 1065, 1113, 1651
MslI CAYNNNNRTG 2 cut(s) 723, 1260
MspA1I CMGCKG 2 cut(s) 68, 941
MspCI CTTAAG 1 cut(s) 220
MspI CCGG 6 cut(s) 201, 522, 735, 956, 1053, 1467
MspR9I CCNGG 4 cut(s) 74, 923, 990, 1161
MunI CAATTG 1 cut(s) 59
Mva1269I GAATGC 1 cut(s) 971
MvaI CCWGG 4 cut(s) 74, 923, 990, 1161
MwoI GCNNNNNNNGC 8 cut(s) 284, 293, 341, 350, 386, 518, 950, 1469
NdeI CATATG 1 cut(s) 1012
NheI GCTAGC 1 cut(s) 413
NlaIII CATG 7 cut(s) 251, 353, 1052, 1108, 1195, 1452, 1591
NlaIV GGNNCC 2 cut(s) 78, 444
NmeAIII GCCGAG 2 cut(s) 42, 145
NmuCI GTSAC 5 cut(s) 157, 400, 688, 832, 1262
NsiI ATGCAT 1 cut(s) 355
NspI RCATGY 3 cut(s) 251, 353, 1452
NspV TTCGAA 1 cut(s) 975
OliI CACNNNNGTG 1 cut(s) 1260
PaeI GCATGC 1 cut(s) 353
PagI TCATGA 1 cut(s) 1587
PceI AGGCCT 3 cut(s) 218, 234, 702
PciSI GCTCTTC 1 cut(s) 576
PctI GAATGC 1 cut(s) 971
PflFI GACNNNGTC 1 cut(s) 1292
PinAI ACCGGT 1 cut(s) 200
PkrI GCNGC 9 cut(s) 313, 382, 511, 940, 943, 1034, 1447, 1465, 1646
Ple19I CGATCG 1 cut(s) 1309
PleI GAGTC 5 cut(s) 613, 1001, 1039, 1188, 1372
PpsI GAGTC 5 cut(s) 613, 1001, 1039, 1188, 1372
PpuMI RGGWCCY 1 cut(s) 801
Psp5II RGGWCCY 1 cut(s) 801
Psp6I CCWGG 4 cut(s) 72, 921, 988, 1159
PspFI CCCAGC 1 cut(s) 1430
PspGI CCWGG 4 cut(s) 72, 921, 988, 1159
PspN4I GGNNCC 2 cut(s) 78, 444
PspPI GGNCC 2 cut(s) 801, 1230
PspPPI RGGWCCY 1 cut(s) 801
PstI CTGCAG 2 cut(s) 39, 940
PsuI RGATCY 2 cut(s) 31, 958
PsyI GACNNNGTC 1 cut(s) 1292
PvuI CGATCG 1 cut(s) 1309
PvuII CAGCTG 1 cut(s) 941
RsaI GTAC 2 cut(s) 444, 696
RsaNI GTAC 2 cut(s) 443, 695
RseI CAYNNNNRTG 2 cut(s) 723, 1260
SapI GCTCTTC 1 cut(s) 576
SaqAI TTAA 4 cut(s) 221, 1065, 1113, 1651
SatI GCNGC 9 cut(s) 312, 381, 510, 939, 942, 1033, 1446, 1464, 1645
Sau96I GGNCC 2 cut(s) 801, 1230
SchI GAGTC 5 cut(s) 613, 1002, 1039, 1189, 1372
ScrFI CCNGG 4 cut(s) 74, 923, 990, 1161
SduI GDGCHC 4 cut(s) 111, 571, 590, 1548
SfaNI GCATC 6 cut(s) 106, 362, 376, 889, 1320, 1640
SfcI CTRYAG 2 cut(s) 35, 936
SfuI TTCGAA 1 cut(s) 975
SinI GGWCC 2 cut(s) 801, 1230
SmiMI CAYNNNNRTG 2 cut(s) 723, 1260
SmlI CTYRAG 2 cut(s) 220, 1361
SmoI CTYRAG 2 cut(s) 220, 1361
SphI GCATGC 1 cut(s) 353
SseBI AGGCCT 3 cut(s) 218, 234, 702
SsiI CCGC 3 cut(s) 66, 344, 625
SspMI CTAG 3 cut(s) 230, 414, 698
StuI AGGCCT 3 cut(s) 218, 234, 702
StyD4I CCNGG 4 cut(s) 72, 921, 988, 1159
StyI CCWWGG 1 cut(s) 213
TaaI ACNGT 3 cut(s) 182, 518, 694
TaiI ACGT 3 cut(s) 839, 1296, 1401
TaqI TCGA 6 cut(s) 900, 975, 1122, 1236, 1305, 1392
TatI WGTACW 1 cut(s) 694
Tru1I TTAA 4 cut(s) 221, 1065, 1113, 1651
Tru9I TTAA 4 cut(s) 221, 1065, 1113, 1651
TscAI CASTG 4 cut(s) 697, 822, 1264, 1419
TseFI GTSAC 5 cut(s) 157, 400, 688, 832, 1262
TseI GCWGC 9 cut(s) 311, 380, 509, 938, 941, 1032, 1445, 1463, 1644
Tsp45I GTSAC 5 cut(s) 157, 400, 688, 832, 1262
TspDTI ATGAA 7 cut(s) 435, 500, 909, 1108, 1227, 1288, 1437
TspRI CASTG 4 cut(s) 697, 822, 1264, 1419
Tth111I GACNNNGTC 1 cut(s) 1292
Vha464I CTTAAG 1 cut(s) 220
VneI GTGCAC 1 cut(s) 1544
VpaK11BI GGWCC 2 cut(s) 801, 1230
XagI CCTNNNNNAGG 1 cut(s) 239
XapI RAATTY 5 cut(s) 101, 896, 1115, 1167, 1328
XceI RCATGY 3 cut(s) 251, 353, 1452
XcmI CCANNNNNNNNNTGG 2 cut(s) 295, 1010
XspI CTAG 3 cut(s) 230, 414, 698
Zsp2I ATGCAT 1 cut(s) 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.