Rorug04G0404300

Abnormal spindle-like microcephaly-associated protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0006240
Physical Location & Seq
Forward (+)
56842819 .. 56844519
1701 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0404300.1

Sequence Viewer

Length: 1701 bp
ATGGTCCACACCCATCTCCTCAAAACCGGGTTCTTCTCCGACGTCTACTCAGCCACCGCTCTCACCGACGCTTACATGAAGCTCAATCTCATGGACGATGCGCTCAAGGTGTTCGACGAAATGCCTGACCGAAACTTGGCTTCGGTAAACGCTGTGATTTCCGGGCTGTTGCATAATGGACATCGCAGAGAGGCTTTAAAGGTGTTCAAGAGCGTTGGTTTTGGAGGGTTCGGGTTGAATTCGGTTACTATAGCCAGTGTGCTTTCGGCGTGTGACAATGCGAAGGAGGGGATGGGAATGCATTGCGCGGCGGTGAAGCTCGGGGTTGAGAGTGATGTTTATGTTGCTACATCAGCTGTGAGTATGTATTCGAGCTGTGGAGAGTTGGTTTCTGCTGCAAAGTTGTTTGAAGATATGCCTGTCAAGAATGTGGTGAGCCATAATGCTTTTATAACAGGGCTTATGCAGAATGGGGTTCCAAGGGTGGTGTTGGATGTGTTTACGAAAATGAGAGCATGTAGAGGTGAAAATCCGAATTCAGTGACATTGGTTTCGGTTCTCTCTGCTTGTGCTAGTGTTTTGTATCTCGGATTTGGCAGGCAGGTTCATGGTTTGATCGTGAAAATTGCGAGTGGGATTGATGCTATGACTAGAACAGCGCTTGTGGACATGTATTCCAAGTGTGGGTGTTGGCAGCTCGGGTACCAAATATTCGAAGATCTAGATGAAACAAGGACCTTGTTTATATGGAATGCCATGATTGCAGGAATGATGTTGAATGCGCAGTGGGAGATTGCTGTTGAGCTTTTCGAACAGCTAGAATCTGAAGGGTTTAAGCCTGATTCAGTGACTTGGAATTCAATGATCAGCGGGTTTTCACAACTAGGGATGGGAAACGAAGCTTTCAAGTATTTTAAGAGAATGCAATCGACTGGTGTAGCTCCGAGTTTGAAATCTGTCACTAGTCTTTTGCAAGCCTGTGCAGATTCATCTGTTCTGCAATGTGGACAAGAGGTTCATGGGCATGCAATTAGGACTGATATTAGCAGTGATCTGTTCTTTTCAACTGCTCTCATTGACATGTACATGAAATGTGGGCAGTCTTCTTGGGCAAGAAGAGTTTTTGATTCCTTTCATGTAAAACCTGACGATCCAGCATTTTGGAATGCAACAATATCTGGGTATGGAAGAGAAGGAGAGAATGAATCTGCATTTCGAATATTTGACCAGATGCTCGAAGAAAAAGTACAACCAAATGCAGCAACTTTTATAAGTCTTCTATCTATGTGTAGTCACAGTGGTTTAATTGACAAGGGATGGCAAATTTTTAGGATGATGGATAGAGATTTTGGAATAAAACCAGATCCGAAACATTATGGTTGTATGATTGACCTTTTAGGTAGATCAGGCAGGTTGGATGAAGCCCGGGAATTAACACACGAGTTATCAGAGCCTTCTGGATCAGTTTTTGCTTCTTTGCTAGGTGCTTGCGAGTCCCATTTAAATCTAGAACTGGGGAAAGAAATGGCCATAAAACTTTCAGAATTAGAGCCAGAGAACCCTACACCTTTCCTGATACTGTCCAAGATATATGCTGGGCTTGGGAGGTGGAAGGATGCAGAAATCATTAGGGGAATGATGGATGATCAAAAGTCAAGAAAGCTCCCTGGCTTTAGCTTATTACAATTGCATGAAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm CH IQ

Protein Analysis

566

Amino Acids

62.4

Weight (kDa)

5.64

Isoelectric Point (pI)

34.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 142 - 191 8.9e-06 PPR repeat family
PPR_2 PF13041 248 - 292 6.3e-11 PPR repeat family
PPR_long PF17177 263 - 376 6.4e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 269 - 329 2.8e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 277 - 308 8.2e-07 PPR repeat
PPR_2 PF13041 280 - 328 7.2e-12 PPR repeat family
PPR PF01535 283 - 312 6.4e-09 PPR repeat
PPR_2 PF13041 387 - 431 2.3e-10 PPR repeat family
E_motif PF20431 500 - 561 2e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 452, 1271
AatII GACGTC 1 cut(s) 45
Acc16I TGCGCA 1 cut(s) 783
Acc36I ACCTGC 2 cut(s) 592, 1401
Acc65I GGTACC 1 cut(s) 702
AccB1I GGYRCC 1 cut(s) 702
AccBSI CCGCTC 1 cut(s) 59
AccI GTMKAC 1 cut(s) 45
AccII CGCG 1 cut(s) 308
AciI CCGC 4 cut(s) 57, 308, 311, 870
AclWI GGATC 3 cut(s) 1145, 1358, 1468
AcoI YGGCCR 1 cut(s) 1527
AcsI RAATTY 4 cut(s) 238, 535, 856, 1323
AcuI CTGAAG 1 cut(s) 846
AcyI GRCGYC 1 cut(s) 42
AfaI GTAC 3 cut(s) 704, 1085, 1248
AfeI AGCGCT 1 cut(s) 660
AfiI CCNNNNNNNGG 2 cut(s) 136, 684
AflIII ACRYGT 2 cut(s) 669, 1080
AgsI TTSAA 8 cut(s) 208, 238, 410, 778, 861, 907, 952, 1065
AhlI ACTAGT 1 cut(s) 962
AjnI CCWGG 1 cut(s) 1666
AloI GAACNNNNNNTCC 2 cut(s) 999, 1031
AlwI GGATC 3 cut(s) 1145, 1358, 1468
Ama87I CYCGRG 3 cut(s) 320, 698, 1425
Aor51HI AGCGCT 1 cut(s) 660
AoxI GGCC 1 cut(s) 1527
ApeKI GCWGC 3 cut(s) 395, 694, 1259
ApoI RAATTY 4 cut(s) 238, 535, 856, 1323
ArsI GACNNNNNNTTYG 2 cut(s) 535, 567
Asp718I GGTACC 1 cut(s) 702
AspLEI GCGC 4 cut(s) 103, 308, 661, 784
AspS9I GGNCC 2 cut(s) 4, 735
AsuC2I CCSGG 4 cut(s) 28, 163, 1426, 1427
AsuHPI GGTGA 4 cut(s) 55, 325, 445, 536
AsuII TTCGAA 3 cut(s) 714, 810, 1216
AvaI CYCGRG 3 cut(s) 320, 698, 1425
AvaII GGWCC 2 cut(s) 4, 735
BalI TGGCCA 1 cut(s) 1529
BanI GGYRCC 1 cut(s) 702
BarI GAAGNNNNNNTAC 2 cut(s) 1230, 1262
BauI CACGAG 1 cut(s) 1439
BbsI GAAGAC 2 cut(s) 1095, 1268
BbvI GCAGC 3 cut(s) 382, 706, 1271
BccI CCATC 6 cut(s) 21, 286, 883, 1311, 1330, 1633
BciT130I CCWGG 1 cut(s) 1668
BclI TGATCA 2 cut(s) 864, 1645
BcnI CCSGG 4 cut(s) 28, 163, 1426, 1427
BcuI ACTAGT 1 cut(s) 962
BfaI CTAG 8 cut(s) 573, 651, 722, 818, 884, 963, 1481, 1508
BfmI CTRYAG 1 cut(s) 249
BfoI RGCGCY 1 cut(s) 662
BfuAI ACCTGC 2 cut(s) 592, 1401
BglII AGATCT 1 cut(s) 718
BisI GCNGC 4 cut(s) 309, 396, 695, 1260
BlsI GCNGC 4 cut(s) 310, 397, 696, 1261
Bme1390I CCNGG 5 cut(s) 28, 163, 1426, 1427, 1668
Bme18I GGWCC 2 cut(s) 4, 735
BmeT110I CYCGRG 3 cut(s) 320, 698, 1425
BmgT120I GGNCC 2 cut(s) 4, 735
BmiI GGNNCC 2 cut(s) 477, 704
BmrFI CCNGG 5 cut(s) 28, 163, 1426, 1427, 1668
BmrI ACTGGG 1 cut(s) 1523
BmsI GCATC 4 cut(s) 88, 631, 1221, 1606
BmuI ACTGGG 1 cut(s) 1523
BpiI GAAGAC 2 cut(s) 1095, 1268
Bpu14I TTCGAA 3 cut(s) 714, 810, 1216
BpuEI CTTGAG 1 cut(s) 89
BpuMI CCSGG 4 cut(s) 28, 163, 1426, 1427
BsaHI GRCGYC 1 cut(s) 42
BsaJI CCNNGG 3 cut(s) 479, 1425, 1666
BsaXI ACNNNNNCTCC 2 cut(s) 372, 402
Bsc4I CCNNNNNNNGG 2 cut(s) 136, 684
Bse1I ACTGG 3 cut(s) 255, 937, 1518
Bse3DI GCAATG 2 cut(s) 301, 1007
BseBI CCWGG 1 cut(s) 1668
BseDI CCNNGG 3 cut(s) 479, 1425, 1666
BseGI GGATG 8 cut(s) 297, 499, 894, 1322, 1338, 1423, 1621, 1648
BseLI CCNNNNNNNGG 2 cut(s) 136, 684
BseMI GCAATG 2 cut(s) 301, 1007
BseMII CTCAG 1 cut(s) 63
BseNI ACTGG 3 cut(s) 255, 937, 1518
BseRI GAGGAG 1 cut(s) 8
BseXI GCAGC 3 cut(s) 382, 706, 1271
BseYI CCCAGC 1 cut(s) 1595
BsgI GTGCAG 1 cut(s) 1002
Bsh1236I CGCG 1 cut(s) 308
BshFI GGCC 1 cut(s) 1529
BshNI GGYRCC 1 cut(s) 702
BsiHKCI CYCGRG 3 cut(s) 320, 698, 1425
BsiSI CCGG 3 cut(s) 27, 162, 1426
BslFI GGGAC 1 cut(s) 1480
BslI CCNNNNNNNGG 2 cut(s) 136, 684
BsmFI GGGAC 1 cut(s) 1480
BsmI GAATGC 5 cut(s) 303, 757, 784, 927, 1171
BsnI GGCC 1 cut(s) 1529
BsoBI CYCGRG 3 cut(s) 320, 698, 1425
Bsp119I TTCGAA 3 cut(s) 714, 810, 1216
Bsp1407I TGTACA 1 cut(s) 1083
Bsp143I GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
BspACI CCGC 4 cut(s) 57, 308, 311, 870
BspANI GGCC 1 cut(s) 1529
BspCNI CTCAG 1 cut(s) 62
BspFNI CGCG 1 cut(s) 308
BspLI GGNNCC 2 cut(s) 477, 704
BspMI ACCTGC 2 cut(s) 592, 1401
BspPI GGATC 3 cut(s) 1145, 1358, 1468
BspT104I TTCGAA 3 cut(s) 714, 810, 1216
BspT107I GGYRCC 1 cut(s) 702
BsrBI CCGCTC 1 cut(s) 59
BsrDI GCAATG 2 cut(s) 301, 1007
BsrGI TGTACA 1 cut(s) 1083
BsrI ACTGG 3 cut(s) 255, 937, 1518
BssECI CCNNGG 3 cut(s) 479, 1425, 1666
BssMI GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
BssNI GRCGYC 1 cut(s) 42
BssSI CACGAG 1 cut(s) 1439
BssT1I CCWWGG 1 cut(s) 479
Bst2BI CACGAG 1 cut(s) 1439
Bst2UI CCWGG 1 cut(s) 1668
Bst4CI ACNGT 2 cut(s) 1298, 1581
Bst6I CTCTTC 2 cut(s) 1111, 1183
BstACI GRCGYC 1 cut(s) 42
BstAUI TGTACA 1 cut(s) 1083
BstBI TTCGAA 3 cut(s) 714, 810, 1216
BstC8I GCNNGC 4 cut(s) 599, 975, 1026, 1489
BstDEI CTNAG 1 cut(s) 49
BstF5I GGATG 8 cut(s) 297, 499, 894, 1322, 1338, 1423, 1621, 1648
BstFNI CGCG 1 cut(s) 308
BstH2I RGCGCY 1 cut(s) 662
BstHHI GCGC 4 cut(s) 103, 308, 661, 784
BstKTI GATC 9 cut(s) 618, 721, 867, 1054, 1153, 1366, 1406, 1463, 1648
BstMBI GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
BstMWI GCNNNNNNNGC 2 cut(s) 353, 761
BstNI CCWGG 1 cut(s) 1668
BstNSI RCATGY 4 cut(s) 519, 673, 1028, 1084
BstSCI CCNGG 5 cut(s) 26, 161, 1424, 1425, 1666
BstSFI CTRYAG 1 cut(s) 249
BstUI CGCG 1 cut(s) 308
BstV1I GCAGC 3 cut(s) 382, 706, 1271
BstV2I GAAGAC 2 cut(s) 1095, 1268
BstX2I RGATCY 2 cut(s) 718, 1363
BstXI CCANNNNNNTGG 1 cut(s) 1161
BstYI RGATCY 2 cut(s) 718, 1363
BsuRI GGCC 1 cut(s) 1529
BtgZI GCGATG 1 cut(s) 167
BtsCI GGATG 8 cut(s) 297, 499, 894, 1322, 1338, 1423, 1621, 1648
BtsI GCAGTG 2 cut(s) 791, 1054
BtsIMutI CAGTG 6 cut(s) 262, 546, 791, 852, 1054, 1303
BveI ACCTGC 2 cut(s) 592, 1401
Cac8I GCNNGC 4 cut(s) 599, 975, 1026, 1489
CfoI GCGC 4 cut(s) 103, 308, 661, 784
Cfr13I GGNCC 2 cut(s) 4, 735
Cfr9I CCCGGG 1 cut(s) 1425
CseI GACGC 1 cut(s) 77
Csp6I GTAC 3 cut(s) 703, 1084, 1247
CviQI GTAC 3 cut(s) 703, 1084, 1247
DdeI CTNAG 1 cut(s) 49
DpnI GATC 9 cut(s) 617, 720, 866, 1053, 1152, 1365, 1405, 1462, 1647
DpnII GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
DraI TTTAAA 2 cut(s) 198, 1503
EaeI YGGCCR 1 cut(s) 1527
Eam1104I CTCTTC 2 cut(s) 1111, 1183
EarI CTCTTC 2 cut(s) 1111, 1183
Eco130I CCWWGG 1 cut(s) 479
Eco47I GGWCC 2 cut(s) 4, 735
Eco47III AGCGCT 1 cut(s) 660
Eco57I CTGAAG 1 cut(s) 846
Eco88I CYCGRG 3 cut(s) 320, 698, 1425
EcoO109I RGGNCCY 1 cut(s) 735
EcoRI GAATTC 3 cut(s) 238, 535, 856
EcoRII CCWGG 1 cut(s) 1666
EcoT14I CCWWGG 1 cut(s) 479
EcoT22I ATGCAT 1 cut(s) 303
ErhI CCWWGG 1 cut(s) 479
FaqI GGGAC 1 cut(s) 1480
FauI CCCGC 1 cut(s) 863
FbaI TGATCA 2 cut(s) 864, 1645
FblI GTMKAC 1 cut(s) 45
Fnu4HI GCNGC 4 cut(s) 309, 396, 695, 1260
FokI GGATG 8 cut(s) 304, 506, 901, 1329, 1345, 1430, 1628, 1655
Fsp4HI GCNGC 4 cut(s) 309, 396, 695, 1260
FspBI CTAG 8 cut(s) 573, 651, 722, 818, 884, 963, 1481, 1508
FspI TGCGCA 1 cut(s) 783
GlaI GCGC 4 cut(s) 102, 307, 660, 783
GluI GCNGC 4 cut(s) 309, 396, 695, 1260
GsaI CCCAGC 1 cut(s) 1599
HaeII RGCGCY 1 cut(s) 662
HaeIII GGCC 1 cut(s) 1529
HapII CCGG 3 cut(s) 27, 162, 1426
HgaI GACGC 1 cut(s) 77
HhaI GCGC 4 cut(s) 103, 308, 661, 784
Hin1I GRCGYC 1 cut(s) 42
Hin6I GCGC 4 cut(s) 101, 306, 659, 782
HinP1I GCGC 4 cut(s) 101, 306, 659, 782
HindIII AAGCTT 1 cut(s) 900
HinfI GANTC 6 cut(s) 821, 842, 986, 1127, 1205, 1493
HpaII CCGG 3 cut(s) 27, 162, 1426
HphI GGTGA 4 cut(s) 55, 325, 445, 536
Hpy166II GTNNAC 6 cut(s) 7, 46, 148, 501, 667, 1007
Hpy188I TCNGA 8 cut(s) 40, 534, 590, 826, 945, 1368, 1450, 1543
Hpy188III TCNNGA 8 cut(s) 208, 424, 619, 722, 1458, 1508, 1573, 1656
Hpy8I GTNNAC 6 cut(s) 7, 46, 148, 501, 667, 1007
Hpy99I CGWCG 3 cut(s) 44, 71, 119
HpyAV CCTTC 5 cut(s) 277, 821, 1187, 1464, 1606
HpyCH4III ACNGT 2 cut(s) 1298, 1581
HpyCH4IV ACGT 1 cut(s) 42
HpyF10VI GCNNNNNNNGC 2 cut(s) 353, 761
HpyF3I CTNAG 1 cut(s) 49
HpySE526I ACGT 1 cut(s) 42
Hsp92I GRCGYC 1 cut(s) 42
HspAI GCGC 4 cut(s) 101, 306, 659, 782
KpnI GGTACC 1 cut(s) 706
Ksp22I TGATCA 2 cut(s) 864, 1645
Kzo9I GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
LmnI GCTCC 2 cut(s) 946, 1668
Lsp1109I GCAGC 3 cut(s) 382, 706, 1271
LweI GCATC 4 cut(s) 88, 631, 1221, 1606
MaeI CTAG 8 cut(s) 573, 651, 722, 818, 884, 963, 1481, 1508
MaeII ACGT 1 cut(s) 42
MaeIII GTNAC 6 cut(s) 244, 272, 541, 847, 958, 1292
MalI GATC 9 cut(s) 617, 720, 866, 1053, 1152, 1365, 1405, 1462, 1647
MbiI CCGCTC 1 cut(s) 59
MboI GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
MboII GAAGA 8 cut(s) 25, 422, 728, 1095, 1128, 1200, 1250, 1268
MfeI CAATTG 1 cut(s) 1685
MflI RGATCY 2 cut(s) 718, 1363
MlsI TGGCCA 1 cut(s) 1529
MluNI TGGCCA 1 cut(s) 1529
MlyI GAGTC 1 cut(s) 1502
MmeI TCCRAC 3 cut(s) 63, 471, 1395
MnlI CCTC 7 cut(s) 29, 184, 218, 280, 515, 1006, 1599
Mox20I TGGCCA 1 cut(s) 1529
Mph1103I ATGCAT 1 cut(s) 303
MscI TGGCCA 1 cut(s) 1529
MseI TTAA 6 cut(s) 197, 834, 915, 1304, 1433, 1502
MslI CAYNNNNRTG 3 cut(s) 1023, 1079, 1085
Msp20I TGGCCA 1 cut(s) 1529
MspA1I CMGCKG 2 cut(s) 356, 870
MspI CCGG 3 cut(s) 27, 162, 1426
MspR9I CCNGG 5 cut(s) 28, 163, 1426, 1427, 1668
MunI CAATTG 1 cut(s) 1685
Mva1269I GAATGC 5 cut(s) 303, 757, 784, 927, 1171
MvaI CCWGG 1 cut(s) 1668
MvnI CGCG 1 cut(s) 308
MwoI GCNNNNNNNGC 2 cut(s) 353, 761
NciI CCSGG 4 cut(s) 28, 163, 1426, 1427
NdeII GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
NlaIV GGNNCC 2 cut(s) 477, 704
NmuCI GTSAC 5 cut(s) 272, 541, 847, 958, 1292
NsbI TGCGCA 1 cut(s) 783
NsiI ATGCAT 1 cut(s) 303
NspI RCATGY 4 cut(s) 519, 673, 1028, 1084
NspV TTCGAA 3 cut(s) 714, 810, 1216
PaeI GCATGC 1 cut(s) 1028
PciI ACATGT 2 cut(s) 669, 1080
PctI GAATGC 5 cut(s) 303, 757, 784, 927, 1171
PfeI GAWTC 5 cut(s) 821, 842, 986, 1127, 1205
PkrI GCNGC 4 cut(s) 310, 397, 696, 1261
PleI GAGTC 1 cut(s) 1501
PpsI GAGTC 1 cut(s) 1501
PpuMI RGGWCCY 1 cut(s) 735
PscI ACATGT 2 cut(s) 669, 1080
PsiI TTATAA 2 cut(s) 452, 1271
Psp5II RGGWCCY 1 cut(s) 735
Psp6I CCWGG 1 cut(s) 1666
PspFI CCCAGC 1 cut(s) 1595
PspGI CCWGG 1 cut(s) 1666
PspN4I GGNNCC 2 cut(s) 477, 704
PspPI GGNCC 2 cut(s) 4, 735
PspPPI RGGWCCY 1 cut(s) 735
PsuI RGATCY 2 cut(s) 718, 1363
PvuII CAGCTG 1 cut(s) 356
RsaI GTAC 3 cut(s) 704, 1085, 1248
RsaNI GTAC 3 cut(s) 703, 1084, 1247
RseI CAYNNNNRTG 3 cut(s) 1023, 1079, 1085
SaqAI TTAA 6 cut(s) 197, 834, 915, 1304, 1433, 1502
SatI GCNGC 4 cut(s) 309, 396, 695, 1260
Sau3AI GATC 9 cut(s) 615, 718, 864, 1051, 1150, 1363, 1403, 1460, 1645
Sau96I GGNCC 2 cut(s) 4, 735
SchI GAGTC 1 cut(s) 1502
ScrFI CCNGG 5 cut(s) 28, 163, 1426, 1427, 1668
SfaNI GCATC 4 cut(s) 88, 631, 1221, 1606
SfcI CTRYAG 1 cut(s) 249
SfuI TTCGAA 3 cut(s) 714, 810, 1216
SinI GGWCC 2 cut(s) 4, 735
SmaI CCCGGG 1 cut(s) 1427
SmiI ATTTAAAT 1 cut(s) 1503
SmiMI CAYNNNNRTG 3 cut(s) 1023, 1079, 1085
SmlI CTYRAG 1 cut(s) 104
SmoI CTYRAG 1 cut(s) 104
SpeI ACTAGT 1 cut(s) 962
SphI GCATGC 1 cut(s) 1028
SsiI CCGC 4 cut(s) 57, 308, 311, 870
SspI AATATT 2 cut(s) 711, 1221
SspMI CTAG 8 cut(s) 573, 651, 722, 818, 884, 963, 1481, 1508
StyD4I CCNGG 5 cut(s) 26, 161, 1424, 1425, 1666
StyI CCWWGG 1 cut(s) 479
SwaI ATTTAAAT 1 cut(s) 1503
TaaI ACNGT 2 cut(s) 1298, 1581
TaiI ACGT 1 cut(s) 45
TaqI TCGA 7 cut(s) 114, 371, 714, 810, 929, 1216, 1236
TaqII GACCGA 1 cut(s) 144
TatI WGTACW 2 cut(s) 1083, 1246
TauI GCSGC 1 cut(s) 311
TfiI GAWTC 5 cut(s) 821, 842, 986, 1127, 1205
Tru1I TTAA 6 cut(s) 197, 834, 915, 1304, 1433, 1502
Tru9I TTAA 6 cut(s) 197, 834, 915, 1304, 1433, 1502
TscAI CASTG 6 cut(s) 262, 546, 791, 852, 1054, 1303
TseFI GTSAC 5 cut(s) 272, 541, 847, 958, 1292
TseI GCWGC 3 cut(s) 395, 694, 1259
Tsp45I GTSAC 5 cut(s) 272, 541, 847, 958, 1292
TspDTI ATGAA 9 cut(s) 92, 596, 741, 978, 1007, 1103, 1124, 1218, 1434
TspMI CCCGGG 1 cut(s) 1425
TspRI CASTG 6 cut(s) 262, 546, 791, 852, 1054, 1303
VpaK11BI GGWCC 2 cut(s) 4, 735
XapI RAATTY 4 cut(s) 238, 535, 856, 1323
XbaI TCTAGA 2 cut(s) 721, 1507
XceI RCATGY 4 cut(s) 519, 673, 1028, 1084
XmaI CCCGGG 1 cut(s) 1425
XmiI GTMKAC 1 cut(s) 45
XspI CTAG 8 cut(s) 573, 651, 722, 818, 884, 963, 1481, 1508
ZraI GACGTC 1 cut(s) 43
Zsp2I ATGCAT 1 cut(s) 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.