Rw5G002920

Abnormal spindle-like microcephaly-associated protein homolog

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
2756768 .. 2764269
7502 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G002920.1

Sequence Viewer

Length: 3888 bp
ATGGACGGCGCGGAACCGCCGTTATGTCCGTCACCGTGTCCGTACAAACCGCCGTCCACTCTCTTCAAAGACATCTCCAATTTCAAAACCCCAAAACGCCCCTCCAAAATCTCCAATTTCCACTCCCCCTGCCCCCAATTCTTCACCGCCTCCAAACACACGCCCCGGACAAACTCGTCCTTTCGCCGCCGGCCGTCGATTGCTCCTTCCAACTCTGCTCGGACCAAAGCCGCCGTCCGCAGACTCAAGGCCGTAGAGCTCGAGCAGTCACAGTCCTCCCGCAAGGTCCAAATCCGAAAGGAGCAGTCCCTCAAATCTCTCGCGAAATCTCTCACCGTCTGGCTCAATTTCCTCTTCGAAAACCCTAGGTCCTGCGGCTGTAATTTTCCGGTCGATGAGGATCACAGTCAAACGCTCCGGAAGGGGAAGAGGGACAGCGGGTCGGGCGTTGAGGTTCGGGTAGACGCGGCGTGGAGGGACCCGAAGCGGCAGAGAGACTCGTCGTGGAAAGGTGAAGATTCCGAAAGTGCCGGTGCGTTTTCGAGCTCTAAGTACTCGAAATTGCAGTGTTCTTTGAAGCTCTTGTGTAGTTTTGATGATTTGGTTCAGCGAATGCGGTTTTATTTGAGCCTGGGGAGTTGCAAGGAGGTTTTCGATTCAATGATTCAAGTAGCCAAGAGTATTGATGAAGGGAGGTTAAAGATGAAGGTGCATTGCCCTTTAGTGACTGATGTTGGACTGAGAAAGAAGGCCACTAAAGTCCTTATGAGTTATAATCCAATCTGGCTTCGAATTGGATTGTACGTTATATTTGGGGGTGACTCTTTGTTGTCAGACCGAGAAGTTAACTCTGATGAGGAAGTCGCATTTTTGAAAATGATTATTGAGAAGCAACTGTTTGCACATACTGGTCTAGCGAAAGAGTATGCTTATAACAAGAAGGTTGAGGGTCTTTACCGACCGGGTTATTATGAAGCTTTGGGAAATGTCATATTGAAGAGGTTTCTGTTGCTTGTTCTTATTCTGGATAGAGCTAAATCTCAAAGCAGTCTTTCTCTTAAGTATGGTCTTGATGGAGTGGATGGGGGTTCTCCTTTATTGTTTATGGTACAGTCTAGTATCAAATCAAGTCATCAGGTGATCCATGATTTTTTGTCATCTGATATCATGCTTGGAGAAGGTAACGTCTCAGCACATCTGGTGATTTTAGGATATAAAGTATCTCATCAACAGTCTCCGATCGTGGATTTTGACTTTCGAGTTACAGATTTATTTGTTGATCTTCAAGACGGGTTGCGCCTCTGTAGAGCGATTCAGCTTCTGAAGGATGACTCATCTATCCTAATGAAAATGGCTGTTCCATCAGATACACATAAAAAGCACCTGGCAAATTGTGGCACTGCCCTGCAGTATCTTAAGGAGGCTGGTGTTGTTTTACATGATGATGATGGAATGATGATTGTAGAAGATGATATTGCTGATGGGGAGAAGGAACTTACTATTTCCTTGCTTTGGAATATGTTTGTTCATTTGCAGCTACCTCTTTTGGTCAAGAAAACAGCATTAGCTGAGGAAATATGCAATATTCGAGGAAATATGGATAGCTTCATTAATGCTGATTCTCCTCCACTGGAACTGCTTTTAAATTGGATTCAGGCAATTTGTGAAATTTATGATTGCAAGATCGACAGTTTTTCTTCATTGGTCGATGGAAAAGCCATATGGTGCCTGCTGGATTATCACTTCCGTAAACAACTTTGTTGTGCTTGGTCATCGAAGGATCCTAATAAATCAAGTCACGAAGAATCAATCATGTTAGCCACCGAATATTCAGATGCCGTGCACAACTTTTTATTATCACAGAAATTGATGTCACTATTGGGAAACTTTCCAGAGGTTCTGCAAATAAGTGACATTCTTGAGTATAATGGTGTACCTAATGATCATAGTGTGGTGATCCTGTTGGTGTTCCTTTCATCTCAACTGATTGGGAAGAAAAACATGGGTCAGTTAAACTTTCATAAACTATTAGGCTGTGATTGTCAAAGTTCAGAGCGAATATGCTCTGTAAGACCTGAACCAGCACAGATCCAAAAAGAAACACGCGTTCAGCGTACTGAAGGTTCTGTGAAAAACTTTAAGGCTATCCAGGCTTGGTGGCAAGATATGGCTGAAAGGAACCATAAACTTCCAAAACCATTAGCTCCTACTTTGCAGAACTTCTCTACAAACGAAGATGAAATTAACATTTCAAGAGTAAATGCTGCAAAAAGGATTCAGTCAGTATTACTTATTCAACGAGCTGCAAGAAATTGGATCATGCGAAGACATCAGGATAGAAGTATGGTAACTCATAATGCATGCATTCACGATCAAGCAAATGCTGCTATTGTTGTCCAAAGATATACTCGTGGGTGGCTTGCAAGATCGAGATGTATTCATGGGGGCTCTCTCATACATAAATCCTCAAGTATATTTCAGGAAAATGGTGCACTAGATGTTCGAACAAAGGCAGCAGTTAAAATCCAACTTGCTTGGAATTTTTATGTCTGTCTTCACAATAAGCACTTGGCTGCTACTAAAATTCAAAGTCATTTTCGTAGTTGGCTATTGAGGAGGAGGTTTCACATTCAAAGGCAAGCAACAATAAAAATCCAAAGTGTTTTACGGATGTCAAGATGTTTGAAGGCTTATCAGCAATACAAAATTGCAACCGTGTCAGCCACTATCATTCAATCTTATGTACGTGGATGGGTTGCCCGAAGAGAAGCTGATCATCGTAGGCATCTCATTGTTACTATCCAAAGATACTGCCGTGGTTGGTTGAGAAGGAGGTATTTCTTATGCCAAAGAATAGCTGTAGTGAAGATCCAAAGTGCTATTCGATGCCTACTATACTGTCAGGCATTTCAACGTCATAGACAAGCTGCAGTGGAAATTCAACGGATAGTCAGGGGGAAGATTAGTCGAAGTAATCTCTTAGGTGCTTCATGTCTACACCCTGTCACCCCCCATGGTTGTCTTTTAAAGATCACGAGTGCCTTCTATAGTAGTGTCGAACTAAATATAGTGTTCTGCTCTGTGTTGAAATTGCAAAGGTGGTGGAGGAGTGTCCTGTCACTAAAACTAAGAACAAAGTCTGCGGTACTTATTCAGTCTCATATTCGAGAGTGGTTTGCTAGGCAAAAGGCTTCTAGAGAGAGGGATTGTAGTGTTGTGATACAATCATACTGGCGAGGCTACCAGGCACGGAAAAAAGAGTCAAGGGAACAGCTCAAGGATTTACGCTTGAGATTGCAGAAATCTTCTACTAGTGTGGACGATAGCATGCGTATTATCAACAGACTTGTTGCTGCACTTTCAGAGCTACTAAGAATGAAAAGTATCAGCAACATTCTTCATACTTGTGCCACTTTGGATATGGCTACAAGGTATTCTCAAAAATGTTGTGAAAGACTCGTGGATGCTGGAGCTATCAAAACTTTGCTGAAGCTCATTCGCTCAGGCAGCCGAAGTATACCCGATCAGGAGGTTCTAAAGCACGCACTGTCAACTCTAAGAAACCTTGCTCGCTATCCACACTTGGTTGAAGTACTAATTGATTGTGAAGGGTCTGTAGAAACTGTTCTCTGGGAGTTGCTAAGGAACAAGGAAGAAGGTTATTTCATTGCTTCTGAACTTCTGAAGAAGATATGCTCTAGTCATAAAGGTGCTGAAGCTGTACGCAAGTCACCTGCCCATTTGAAAAGGCTGCGCAGTCTTGTGGAGGAACTTGGAAGGAAGTCATGCAATGAGAAGAGGAATGCCCGATTCGCAAATGCTAGAGAGAATACAGAGAGAAGACTAAAGGAGGCTGTTGTGATTCTGAAAATGGCAACAGAAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1295

Amino Acids

147.69

Weight (kDa)

9.64

Isoelectric Point (pI)

51.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 774, 933
AarI CACCTGC 1 cut(s) 3742
AasI GACNNNNNNGTC 1 cut(s) 175
Acc16I TGCGCA 1 cut(s) 3755
Acc36I ACCTGC 1 cut(s) 3742
AccB1I GGYRCC 1 cut(s) 1725
AccI GTMKAC 3 cut(s) 462, 2995, 3517
AccII CGCG 4 cut(s) 11, 323, 467, 2106
AccIII TCCGGA 1 cut(s) 417
AclWI GGATC 8 cut(s) 408, 1135, 1775, 1788, 1951, 2083, 2324, 2863
AcoI YGGCCR 1 cut(s) 191
AcsI RAATTY 4 cut(s) 1668, 2539, 2583, 2937
AcuI CTGAAG 5 cut(s) 1343, 2139, 3509, 3704, 3735
AfiI CCNNNNNNNGG 1 cut(s) 1512
AflII CTTAAG 2 cut(s) 1058, 1415
AflIII ACRYGT 1 cut(s) 2104
AhdI GACNNNNNGTC 1 cut(s) 439
AhlI ACTAGT 1 cut(s) 3311
AjnI CCWGG 4 cut(s) 630, 1383, 2148, 3243
AjuI GAANNNNNNNTTGG 2 cut(s) 2865, 2897
Alw21I GWGCWC 4 cut(s) 261, 548, 1845, 2494
Alw26I GTCTC 4 cut(s) 489, 1192, 1239, 3162
Alw44I GTGCAC 2 cut(s) 1841, 2490
AlwI GGATC 8 cut(s) 408, 1135, 1775, 1788, 1951, 2083, 2324, 2863
AlwNI CAGNNNCTG 1 cut(s) 1321
Ama87I CYCGRG 1 cut(s) 260
Aor13HI TCCGGA 1 cut(s) 417
AoxI GGCC 3 cut(s) 191, 249, 750
ApaLI GTGCAC 2 cut(s) 1841, 2490
ApoI RAATTY 4 cut(s) 1668, 2539, 2583, 2937
ArsI GACNNNNNNTTYG 2 cut(s) 219, 251
AseI ATTAAT 1 cut(s) 1611
Asp700I GAANNNNTTC 1 cut(s) 3624
AspA2I CCTAGG 1 cut(s) 365
AspLEI GCGC 3 cut(s) 11, 1299, 3756
AspS9I GGNCC 4 cut(s) 222, 286, 369, 478
AsuC2I CCSGG 2 cut(s) 166, 963
AsuII TTCGAA 3 cut(s) 357, 790, 2503
AvaI CYCGRG 1 cut(s) 260
AvaII GGWCC 4 cut(s) 222, 286, 369, 478
AvrII CCTAGG 1 cut(s) 365
BaeGI GKGCMC 2 cut(s) 1845, 2494
BaeI ACNNNNGTAYC 2 cut(s) 2800, 2833
BamHI GGATCC 1 cut(s) 1780
BanI GGYRCC 1 cut(s) 1725
BanII GRGCYC 3 cut(s) 261, 548, 2450
BauI CACGAG 3 cut(s) 2409, 3034, 3458
BbsI GAAGAC 3 cut(s) 2332, 2546, 3847
Bbv12I GWGCWC 4 cut(s) 261, 548, 1845, 2494
BbvCI CCTCAGC 1 cut(s) 1569
BccI CCATC 7 cut(s) 1067, 1076, 1369, 1442, 1475, 1703, 2745
BceAI ACGGC 8 cut(s) 4, 22, 37, 178, 218, 236, 1823, 2799
BciT130I CCWGG 4 cut(s) 632, 1385, 2150, 3245
BclI TGATCA 2 cut(s) 1942, 2773
BcnI CCSGG 2 cut(s) 166, 963
BcoDI GTCTC 4 cut(s) 489, 1192, 1239, 3162
BcuI ACTAGT 1 cut(s) 3311
BfaI CTAG 9 cut(s) 366, 914, 1116, 2495, 3180, 3195, 3312, 3699, 3822
BfmI CTRYAG 6 cut(s) 1303, 1406, 2859, 2928, 3046, 3615
BfrI CTTAAG 2 cut(s) 1058, 1415
BfuAI ACCTGC 1 cut(s) 3742
BlnI CCTAGG 1 cut(s) 365
BmcAI AGTACT 2 cut(s) 554, 3594
Bme1390I CCNGG 6 cut(s) 166, 632, 963, 1385, 2150, 3245
Bme18I GGWCC 4 cut(s) 222, 286, 369, 478
BmeRI GACNNNNNGTC 1 cut(s) 439
BmeT110I CYCGRG 1 cut(s) 260
BmgT120I GGNCC 4 cut(s) 222, 286, 369, 478
BmiI GGNNCC 6 cut(s) 15, 479, 480, 1727, 1782, 2180
BmrFI CCNGG 6 cut(s) 166, 632, 963, 1385, 2150, 3245
BmsI GCATC 4 cut(s) 1825, 2794, 2876, 3454
BpiI GAAGAC 3 cut(s) 2332, 2546, 3847
BpmI CTGGAG 1 cut(s) 3489
Bpu10I CCTNAGC 3 cut(s) 1569, 3502, 3641
Bpu14I TTCGAA 3 cut(s) 357, 790, 2503
BpuEI CTTGAG 5 cut(s) 230, 1940, 2452, 3260, 3310
BpuMI CCSGG 2 cut(s) 166, 963
BsaAI YACGTR 1 cut(s) 2747
BsaBI GATNNNNATC 1 cut(s) 399
BsaJI CCNNGG 5 cut(s) 164, 365, 631, 2815, 3013
BsaWI WCCGGW 2 cut(s) 388, 417
Bsc4I CCNNNNNNNGG 1 cut(s) 1512
Bse118I RCCGGY 2 cut(s) 189, 530
Bse1I ACTGG 3 cut(s) 913, 1635, 3236
Bse3DI GCAATG 3 cut(s) 712, 3666, 3796
Bse8I GATNNNNATC 1 cut(s) 399
BseAI TCCGGA 1 cut(s) 417
BseBI CCWGG 4 cut(s) 632, 1385, 2150, 3245
BseDI CCNNGG 5 cut(s) 164, 365, 631, 2815, 3013
BseGI GGATG 5 cut(s) 1087, 1333, 2676, 2756, 3469
BseJI GATNNNNATC 1 cut(s) 399
BseLI CCNNNNNNNGG 1 cut(s) 1512
BseMI GCAATG 3 cut(s) 712, 3666, 3796
BseMII CTCAG 4 cut(s) 731, 1203, 1560, 3516
BseNI ACTGG 3 cut(s) 913, 1635, 3236
BseRI GAGGAG 4 cut(s) 1614, 2629, 2632, 3121
BseSI GKGCMC 2 cut(s) 1845, 2494
BseX3I CGGCCG 1 cut(s) 191
BsgI GTGCAG 1 cut(s) 3339
Bsh1236I CGCG 4 cut(s) 11, 323, 467, 2106
Bsh1285I CGRYCG 4 cut(s) 194, 393, 962, 1242
BshFI GGCC 3 cut(s) 193, 251, 752
BshNI GGYRCC 1 cut(s) 1725
BsiEI CGRYCG 4 cut(s) 194, 393, 962, 1242
BsiHKAI GWGCWC 4 cut(s) 261, 548, 1845, 2494
BsiHKCI CYCGRG 1 cut(s) 260
BsiSI CCGG 6 cut(s) 166, 190, 389, 418, 531, 962
BslFI GGGAC 3 cut(s) 292, 446, 491
BslI CCNNNNNNNGG 1 cut(s) 1512
BsmAI GTCTC 4 cut(s) 489, 1192, 1239, 3162
BsmBI CGTCTC 1 cut(s) 1192
BsmFI GGGAC 3 cut(s) 292, 446, 491
BsmI GAATGC 3 cut(s) 618, 2364, 3808
BsnI GGCC 3 cut(s) 193, 251, 752
BsoBI CYCGRG 1 cut(s) 260
Bsp119I TTCGAA 3 cut(s) 357, 790, 2503
Bsp1286I GDGCHC 5 cut(s) 261, 548, 1845, 2450, 2494
Bsp13I TCCGGA 1 cut(s) 417
Bsp19I CCATGG 1 cut(s) 3013
Bsp68I TCGCGA 1 cut(s) 323
BspANI GGCC 3 cut(s) 193, 251, 752
BspCNI CTCAG 4 cut(s) 732, 1202, 1561, 3515
BspEI TCCGGA 1 cut(s) 417
BspFNI CGCG 4 cut(s) 11, 323, 467, 2106
BspLI GGNNCC 6 cut(s) 15, 479, 480, 1727, 1782, 2180
BspMAI CTGCAG 2 cut(s) 1410, 2932
BspMI ACCTGC 1 cut(s) 3742
BspPI GGATC 8 cut(s) 408, 1135, 1775, 1788, 1951, 2083, 2324, 2863
BspT104I TTCGAA 3 cut(s) 357, 790, 2503
BspT107I GGYRCC 1 cut(s) 1725
BspTI CTTAAG 2 cut(s) 1058, 1415
BsrDI GCAATG 3 cut(s) 712, 3666, 3796
BsrFI RCCGGY 2 cut(s) 189, 530
BsrI ACTGG 3 cut(s) 913, 1635, 3236
BssAI RCCGGY 2 cut(s) 189, 530
BssECI CCNNGG 5 cut(s) 164, 365, 631, 2815, 3013
BssNAI GTATAC 1 cut(s) 3518
BssSI CACGAG 3 cut(s) 2409, 3034, 3458
BssT1I CCWWGG 2 cut(s) 365, 3013
Bst1107I GTATAC 1 cut(s) 3518
Bst2BI CACGAG 3 cut(s) 2409, 3034, 3458
Bst2UI CCWGG 4 cut(s) 632, 1385, 2150, 3245
Bst6I CTCTTC 6 cut(s) 68, 359, 422, 992, 2758, 3791
BstAFI CTTAAG 2 cut(s) 1058, 1415
BstAPI GCANNNNNTGC 1 cut(s) 2384
BstBAI YACGTR 1 cut(s) 2747
BstBI TTCGAA 3 cut(s) 357, 790, 2503
BstC8I GCNNGC 8 cut(s) 191, 1730, 2362, 2421, 2640, 3329, 3543, 3571
BstDSI CCRYGG 2 cut(s) 2815, 3013
BstF5I GGATG 5 cut(s) 1087, 1333, 2676, 2756, 3469
BstFNI CGCG 4 cut(s) 11, 323, 467, 2106
BstHHI GCGC 3 cut(s) 11, 1299, 3756
BstMAI GTCTC 4 cut(s) 489, 1192, 1239, 3162
BstMCI CGRYCG 4 cut(s) 194, 393, 962, 1242
BstMWI GCNNNNNNNGC 5 cut(s) 444, 2150, 2384, 3507, 3812
BstNI CCWGG 4 cut(s) 632, 1385, 2150, 3245
BstNSI RCATGY 2 cut(s) 2364, 3331
BstSCI CCNGG 6 cut(s) 164, 630, 961, 1383, 2148, 3243
BstSFI CTRYAG 6 cut(s) 1303, 1406, 2859, 2928, 3046, 3615
BstSLI GKGCMC 2 cut(s) 1845, 2494
BstUI CGCG 4 cut(s) 11, 323, 467, 2106
BstV2I GAAGAC 3 cut(s) 2332, 2546, 3847
BstX2I RGATCY 3 cut(s) 1780, 2088, 2868
BstYI RGATCY 3 cut(s) 1780, 2088, 2868
BstZ17I GTATAC 1 cut(s) 3518
BstZI CGGCCG 1 cut(s) 191
BsuRI GGCC 3 cut(s) 193, 251, 752
BtgI CCRYGG 2 cut(s) 2815, 3013
BtsCI GGATG 5 cut(s) 1087, 1333, 2676, 2756, 3469
BtsI GCAGTG 3 cut(s) 572, 1398, 2937
BtsIMutI CAGTG 5 cut(s) 572, 1398, 1628, 2937, 3545
BtuMI TCGCGA 1 cut(s) 323
BveI ACCTGC 1 cut(s) 3742
Cac8I GCNNGC 8 cut(s) 191, 1730, 2362, 2421, 2640, 3329, 3543, 3571
CaiI CAGNNNCTG 1 cut(s) 1321
CfoI GCGC 3 cut(s) 11, 1299, 3756
Cfr10I RCCGGY 2 cut(s) 189, 530
Cfr13I GGNCC 4 cut(s) 222, 286, 369, 478
CseI GACGC 1 cut(s) 473
CspCI CAANNNNNGTGG 2 cut(s) 3083, 3118
DraI TTTAAA 2 cut(s) 1644, 3027
DrdI GACNNNNNNGTC 1 cut(s) 175
DriI GACNNNNNGTC 1 cut(s) 439
DseDI GACNNNNNNGTC 1 cut(s) 175
EaeI YGGCCR 1 cut(s) 191
EagI CGGCCG 1 cut(s) 191
Eam1104I CTCTTC 6 cut(s) 68, 359, 422, 992, 2758, 3791
Eam1105I GACNNNNNGTC 1 cut(s) 439
EarI CTCTTC 6 cut(s) 68, 359, 422, 992, 2758, 3791
Ecl136II GAGCTC 2 cut(s) 259, 546
EclXI CGGCCG 1 cut(s) 191
Eco130I CCWWGG 2 cut(s) 365, 3013
Eco24I GRGCYC 3 cut(s) 261, 548, 2450
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 4 cut(s) 222, 286, 369, 478
Eco52I CGGCCG 1 cut(s) 191
Eco53kI GAGCTC 2 cut(s) 259, 546
Eco57I CTGAAG 5 cut(s) 1343, 2139, 3509, 3704, 3735
Eco88I CYCGRG 1 cut(s) 260
EcoICRI GAGCTC 2 cut(s) 259, 546
EcoO109I RGGNCCY 2 cut(s) 369, 478
EcoRII CCWGG 4 cut(s) 630, 1383, 2148, 3243
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 2 cut(s) 365, 3013
EcoT22I ATGCAT 2 cut(s) 2362, 2366
EcoT38I GRGCYC 3 cut(s) 261, 548, 2450
ErhI CCWWGG 2 cut(s) 365, 3013
Esp3I CGTCTC 1 cut(s) 1192
FaqI GGGAC 3 cut(s) 292, 446, 491
FauI CCCGC 2 cut(s) 287, 431
FauNDI CATATG 1 cut(s) 1721
FbaI TGATCA 2 cut(s) 1942, 2773
FblI GTMKAC 3 cut(s) 462, 2995, 3517
FokI GGATG 5 cut(s) 1094, 1340, 2683, 2763, 3476
FriOI GRGCYC 3 cut(s) 261, 548, 2450
FspBI CTAG 9 cut(s) 366, 914, 1116, 2495, 3180, 3195, 3312, 3699, 3822
FspI TGCGCA 1 cut(s) 3755
GlaI GCGC 3 cut(s) 10, 1298, 3755
GsuI CTGGAG 1 cut(s) 3489
HaeIII GGCC 3 cut(s) 193, 251, 752
HapII CCGG 6 cut(s) 166, 190, 389, 418, 531, 962
HgaI GACGC 1 cut(s) 473
HhaI GCGC 3 cut(s) 11, 1299, 3756
Hin6I GCGC 3 cut(s) 9, 1297, 3754
HinP1I GCGC 3 cut(s) 9, 1297, 3754
HincII GTYRAC 2 cut(s) 847, 3552
HindII GTYRAC 2 cut(s) 847, 3552
HindIII AAGCTT 1 cut(s) 975
HpaI GTTAAC 1 cut(s) 847
HpaII CCGG 6 cut(s) 166, 190, 389, 418, 531, 962
Hpy99I CGWCG 2 cut(s) 199, 505
HpyCH4IV ACGT 4 cut(s) 804, 1185, 2746, 2914
HpyF10VI GCNNNNNNNGC 5 cut(s) 444, 2150, 2384, 3507, 3812
HpySE526I ACGT 4 cut(s) 804, 1185, 2746, 2914
HspAI GCGC 3 cut(s) 9, 1297, 3754
KflI GGGWCCC 1 cut(s) 478
Kpn2I TCCGGA 1 cut(s) 417
KroI GCCGGC 1 cut(s) 189
KroNI GCCGGC 1 cut(s) 191
Ksp22I TGATCA 2 cut(s) 1942, 2773
KspAI GTTAAC 1 cut(s) 847
LmnI GCTCC 5 cut(s) 208, 301, 420, 2209, 3470
LweI GCATC 4 cut(s) 1825, 2794, 2876, 3454
MaeI CTAG 9 cut(s) 366, 914, 1116, 2495, 3180, 3195, 3312, 3699, 3822
MaeII ACGT 4 cut(s) 804, 1185, 2746, 2914
MflI RGATCY 3 cut(s) 1780, 2088, 2868
MhlI GDGCHC 5 cut(s) 261, 548, 1845, 2450, 2494
MluI ACGCGT 1 cut(s) 2104
MlyI GAGTC 6 cut(s) 237, 491, 815, 1325, 3269, 3450
MmeI TCCRAC 3 cut(s) 234, 715, 2551
Mph1103I ATGCAT 2 cut(s) 2362, 2366
MroI TCCGGA 1 cut(s) 417
MroNI GCCGGC 1 cut(s) 189
MroXI GAANNNNTTC 1 cut(s) 3624
MslI CAYNNNNRTG 3 cut(s) 1443, 3405, 3708
MspA1I CMGCKG 1 cut(s) 438
MspCI CTTAAG 2 cut(s) 1058, 1415
MspI CCGG 6 cut(s) 166, 190, 389, 418, 531, 962
MspR9I CCNGG 6 cut(s) 166, 632, 963, 1385, 2150, 3245
Mva1269I GAATGC 3 cut(s) 618, 2364, 3808
MvaI CCWGG 4 cut(s) 632, 1385, 2150, 3245
MvnI CGCG 4 cut(s) 11, 323, 467, 2106
MwoI GCNNNNNNNGC 5 cut(s) 444, 2150, 2384, 3507, 3812
NaeI GCCGGC 1 cut(s) 191
NciI CCSGG 2 cut(s) 166, 963
NcoI CCATGG 1 cut(s) 3013
NdeI CATATG 1 cut(s) 1721
NgoMIV GCCGGC 1 cut(s) 189
NlaIV GGNNCC 6 cut(s) 15, 479, 480, 1727, 1782, 2180
NruI TCGCGA 1 cut(s) 323
NsbI TGCGCA 1 cut(s) 3755
NsiI ATGCAT 2 cut(s) 2362, 2366
NspI RCATGY 2 cut(s) 2364, 3331
NspV TTCGAA 3 cut(s) 357, 790, 2503
PaeI GCATGC 2 cut(s) 2364, 3331
PaeR7I CTCGAG 1 cut(s) 260
PaqCI CACCTGC 1 cut(s) 3742
PcsI WCGNNNNNNNCGW 1 cut(s) 2110
PctI GAATGC 3 cut(s) 618, 2364, 3808
PdiI GCCGGC 1 cut(s) 191
PdmI GAANNNNTTC 1 cut(s) 3624
Ple19I CGATCG 1 cut(s) 1242
PleI GAGTC 6 cut(s) 237, 491, 815, 1325, 3268, 3450
PpsI GAGTC 6 cut(s) 237, 491, 815, 1325, 3268, 3450
Ppu21I YACGTR 1 cut(s) 2747
PpuMI RGGWCCY 2 cut(s) 369, 478
PshBI ATTAAT 1 cut(s) 1611
PsiI TTATAA 2 cut(s) 774, 933
Psp124BI GAGCTC 2 cut(s) 261, 548
Psp5II RGGWCCY 2 cut(s) 369, 478
Psp6I CCWGG 4 cut(s) 630, 1383, 2148, 3243
PspGI CCWGG 4 cut(s) 630, 1383, 2148, 3243
PspN4I GGNNCC 6 cut(s) 15, 479, 480, 1727, 1782, 2180
PspPI GGNCC 4 cut(s) 222, 286, 369, 478
PspPPI RGGWCCY 2 cut(s) 369, 478
PspXI VCTCGAGB 1 cut(s) 260
PsrI GAACNNNNNNTAC 4 cut(s) 2107, 2139, 3609, 3641
PstI CTGCAG 2 cut(s) 1410, 2932
PstNI CAGNNNCTG 1 cut(s) 1321
PsuI RGATCY 3 cut(s) 1780, 2088, 2868
PvuI CGATCG 1 cut(s) 1242
RruI TCGCGA 1 cut(s) 323
RseI CAYNNNNRTG 3 cut(s) 1443, 3405, 3708
SacI GAGCTC 2 cut(s) 261, 548
Sau96I GGNCC 4 cut(s) 222, 286, 369, 478
ScaI AGTACT 2 cut(s) 554, 3594
SchI GAGTC 6 cut(s) 237, 491, 815, 1325, 3269, 3450
ScrFI CCNGG 6 cut(s) 166, 632, 963, 1385, 2150, 3245
SduI GDGCHC 5 cut(s) 261, 548, 1845, 2450, 2494
SfaNI GCATC 4 cut(s) 1825, 2794, 2876, 3454
SfcI CTRYAG 6 cut(s) 1303, 1406, 2859, 2928, 3046, 3615
Sfr274I CTCGAG 1 cut(s) 260
SfuI TTCGAA 3 cut(s) 357, 790, 2503
SinI GGWCC 4 cut(s) 222, 286, 369, 478
SlaI CTCGAG 1 cut(s) 260
SmiMI CAYNNNNRTG 3 cut(s) 1443, 3405, 3708
SmlI CTYRAG 8 cut(s) 245, 260, 1058, 1415, 1919, 2467, 3275, 3289
SmoI CTYRAG 8 cut(s) 245, 260, 1058, 1415, 1919, 2467, 3275, 3289
SpeI ACTAGT 1 cut(s) 3311
SphI GCATGC 2 cut(s) 2364, 3331
SspI AATATT 2 cut(s) 1585, 1829
SspMI CTAG 9 cut(s) 366, 914, 1116, 2495, 3180, 3195, 3312, 3699, 3822
SstI GAGCTC 2 cut(s) 261, 548
StyD4I CCNGG 6 cut(s) 164, 630, 961, 1383, 2148, 3243
StyI CCWWGG 2 cut(s) 365, 3013
TaiI ACGT 4 cut(s) 807, 1188, 2749, 2917
TaqII GACCGA 1 cut(s) 852
TatI WGTACW 2 cut(s) 552, 3592
TauI GCSGC 5 cut(s) 189, 233, 378, 470, 490
TscAI CASTG 5 cut(s) 572, 1405, 1635, 2937, 3552
TspGWI ACGGA 6 cut(s) 18, 30, 1736, 2683, 2959, 3265
TspRI CASTG 5 cut(s) 572, 1405, 1635, 2937, 3552
Vha464I CTTAAG 2 cut(s) 1058, 1415
VneI GTGCAC 2 cut(s) 1841, 2490
VpaK11BI GGWCC 4 cut(s) 222, 286, 369, 478
VspI ATTAAT 1 cut(s) 1611
XapI RAATTY 4 cut(s) 1668, 2539, 2583, 2937
XbaI TCTAGA 1 cut(s) 3194
XceI RCATGY 2 cut(s) 2364, 3331
XcmI CCANNNNNNNNNTGG 1 cut(s) 3418
XhoI CTCGAG 1 cut(s) 260
XmaJI CCTAGG 1 cut(s) 365
XmiI GTMKAC 3 cut(s) 462, 2995, 3517
XmnI GAANNNNTTC 1 cut(s) 3624
XspI CTAG 9 cut(s) 366, 914, 1116, 2495, 3180, 3195, 3312, 3699, 3822
ZrmI AGTACT 2 cut(s) 554, 3594
Zsp2I ATGCAT 2 cut(s) 2362, 2366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.