Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0013478

Physical Location & Seq

Genomic Coordinates Forward (+)

3515228 .. 3517713

Gene Structure 2486 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0040800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGTCCAGGCGAACCCTTGTTACTACTTCATTCAAGACACCTTATGTGTCTCTGGATCTTCTTTCATACTTGAAATCTGGGCAGGTCACACCATTCCAAGTTTTCAATGACGTTATCATGCCCGATTTCAAAGACCACATATCCAAGGGAAACAACAGCCCCAACAATGCAGCAGCACGTGGGATACTTGAGGAAATCGAGAAAGATCTGGATCCCATTGGTAAGGCCTGTGAAAGGTTCCAGAAATGGGAAGTTGAGGTCAGCAGTGCTATCAAAAAATTAGCTTACCAAAGCCTGGATGATGCATTCAGAGAAAGAACAGAGGCACTGGAAAATACCAACAGAGCCAAATTTCTTCGGGACAAGCTTGAGAAAACCCGCAGCCTTGTCTCCAGGTTGAAGGAATCTGTTTGTTCAGCTTCAATCAAGATGAGTGATGAGACCTCAAAAGACTCAGATACTCCCCAGACCGGTGAGGAATTACAGCCTCCGAAGGAGATCGATATAGTGAAGGTACGAAGAGAAATTGAGGAAATCTACAAAGGTCTAGAAGGCAAACGGAGGCCCTGCTTGCTCTGTTTCTCAATGTTCCCTGAAGATGCTGTCATCAAGAAGAAGGTTTTAATCCATTGGTGGGTTGGAGAGGGGTTCATAGACACTTCGGCCACAGGAGAGAGTCAAGAGACTGTTGAGGAGATAGGGAATAAATTCTTCAAAGAATTTTTGGAGAAGGGCATTATTGAGCCCTTCTACAAAAGGAGCAGGCCTAGTGCAGACAGCTGCAAGATGCAGCCTTCAATCCGTGATGCTGTGATTGAGCTTGCAAGGACAGAAAACTTCTTCGATTTCGATAGAAATGGAAACCCAACTGAAGATTTCTCTTGCTCTGAGAGGGCATGCCTGGTAAGAACCATAGAAGGATCCAATGTCCGTGAATTGCCACTCCTTTCAAGTCAGGAGAATGTTCAAAGTCTGATCAATGTCAATGAGCATGATCTTTATTTTAGACCAAACTGGTTCTCAAAGATGAAAAGCGTCAAAGTTTTGCAGCTCGGGAGATGGCATTCAGACAAGCATCTCATCGAAGTAGAGGACTGTGAATTCCTGAAAGGCTTGAAGAATATGAGAGAGCTCCGGTACTTAAGCCTCCGAGGAGTCTCTAGAATCACAGAGCTTCCTGCTTCAATTTGCAAAGCCCGCAATCTAAGAATCCTGAACCTGAATGGATGTTGTGATTTGGAGAAACTCCCTCGTGGGATAGGCTCACTCAAGAAACTGACACACCTAGATATGTATGAGTGCTACCTGATAAGCGGCATGCCCAAAGGACTTTCTTTGCTCTCCAACCTCCAAGTGCTCAAAGGGTTTGTGATTAGTAAAAGGTCGGGAAGCCAAGACTGTAAGCTAGATGACTTGTCAAAATTGGAAAATCTTCGGAAGCTGAGTATCCACATAGACAGAAATCAAGCTAAAACAGCAGAAAGAGAGCTGAATTCTTTGGCAAAGTTCAAAAAGCTCCAGTCACTTTCTATATCATGGTCACGAATATATGACAAGCCTGCAACTCATTCTCTCCAAACTCTCCAGAGGATTGTCACCAAGAAGCTAACCAGAGCGAAAAGAATAACAAAACTGCCTTCAATGTTCATGGCTCCAGAAAAACTTCCTTCAATGTCAATGGCTCCAGAAAAACTGCCTTCAATTCCAGAGTCTCCACTTCATTTGGAGAAACTTGACCTCCATTACTTCCCTCATTCTACGATGCCAGATTGGTTGAAGCCAACGCTCCTCGGTAAGCTAAAGAAGCTCTATATCAGAGGAGGAAGCCTCTCAGATCTTTGTCACAATGGCATCAATTGTACTTGGACTGTCCAAATGGTGCGCTTGAAGTTCTTGGATGAATTGGAAATGGATTGGGAAAAACTGCGAGGCTTGTTTCCGAAACTGTGTTACTTGGAGGTAGTCAAATGTCGTAAACTCGATTTCAAACAATGTGATGTCAATGGAGTGTGGAAAGAGGAAGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009368 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009657 GO:0009658 GO:0009840 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032991 GO:0034357 GO:0040034 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048506 GO:0048509 GO:0048510 GO:0050789 GO:0050793 GO:0055035 GO:0065007 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04112 ko04212 map04112 map04212

Pfam Domains

Protein Families

CLP_protease

Protein Analysis

675

Amino Acids

77.64

Weight (kDa)

8.91

Isoelectric Point (pI)

51.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	196 - 269	3.4e-12	Disease resistance protein Winged helix domain
LRR_14	PF23598	340 - 559	1.5e-26	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45390
fragaria_vesca	FvH4_3g11210 FvH4_3g11210
malus_domestica	MD05G1265700.v1.1
prunus_persica	Prupe.4G099800_v2.0.a1
pyrus_communis	pycom05g24980 pycom10g20380
rosa_chinensis	RchiOBHm_Chr5g0018161
rosa_laevigata	RLG00000032342
rosa_multiflora	Rmu_sc0006594.1_g000017 Rmu_sc0013020.1_g000003
rosa_roxburghii	Rroxscaffold_1G00059490
rosa_rugosa	Rorug05G0040800
rosa_samantha	Rh5AG133700 Rh5BG132200 Rh5CG144400 Rh5DG134100
rosa_wichuraiana	Rw5G011680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	73
AccB7I	CCANNNNNTGG	1 cut(s)	295
AciI	CCGC	3 cut(s)	379, 1198, 1314
AclWI	GGATC	5 cut(s)	63, 206, 219, 915, 928
AcoI	YGGCCR	1 cut(s)	663
AcsI	RAATTY	5 cut(s)	350, 707, 719, 1100, 1492
AcuI	CTGAAG	2 cut(s)	615, 891
AcvI	CACGTG	1 cut(s)	179
AfaI	GTAC	3 cut(s)	516, 1139, 1861
AfiI	CCNNNNNNNGG	5 cut(s)	234, 247, 295, 470, 634
AflII	CTTAAG	1 cut(s)	1141
AgeI	ACCGGT	1 cut(s)	470
AjnI	CCWGG	4 cut(s)	5, 294, 392, 900
Alw21I	GWGCWC	2 cut(s)	1134, 1359
Alw26I	GTCTC	6 cut(s)	54, 394, 434, 677, 1162, 1716
AlwI	GGATC	5 cut(s)	63, 206, 219, 915, 928
Ama87I	CYCGRG	1 cut(s)	1052
AoxI	GGCC	4 cut(s)	225, 563, 663, 764
ApeKI	GCWGC	6 cut(s)	170, 173, 381, 780, 790, 1048
ApoI	RAATTY	5 cut(s)	350, 707, 719, 1100, 1492
AsiGI	ACCGGT	1 cut(s)	470
Asp700I	GAANNNNTTC	3 cut(s)	707, 1431, 1662
AspLEI	GCGC	1 cut(s)	1884
AspS9I	GGNCC	1 cut(s)	564
AsuHPI	GGTGA	2 cut(s)	485, 1588
AvaI	CYCGRG	1 cut(s)	1052
BamHI	GGATCC	2 cut(s)	211, 920
BanII	GRGCYC	2 cut(s)	747, 1134
BauI	CACGAG	1 cut(s)	1251
BbrPI	CACGTG	1 cut(s)	179
Bbv12I	GWGCWC	2 cut(s)	1134, 1359
BbvI	GCAGC	6 cut(s)	182, 185, 393, 767, 802, 1060
BccI	CCATC	1 cut(s)	1053
BciT130I	CCWGG	4 cut(s)	7, 296, 394, 902
BciVI	GTATCC	2 cut(s)	177, 1457
BclI	TGATCA	1 cut(s)	975
BcoDI	GTCTC	6 cut(s)	54, 394, 434, 677, 1162, 1716
BfaI	CTAG	6 cut(s)	548, 768, 1161, 1286, 1406, 2026
BfrI	CTTAAG	1 cut(s)	1141
BfuAI	ACCTGC	1 cut(s)	73
BfuI	GTATCC	2 cut(s)	177, 1457
BglII	AGATCT	2 cut(s)	205, 1834
BisI	GCNGC	7 cut(s)	171, 174, 382, 781, 791, 1049, 1315
BlsI	GCNGC	7 cut(s)	172, 175, 383, 782, 792, 1050, 1316
Bme1390I	CCNGG	4 cut(s)	7, 296, 394, 902
BmeT110I	CYCGRG	1 cut(s)	1052
BmgT120I	GGNCC	1 cut(s)	564
BmiI	GGNNCC	5 cut(s)	213, 239, 922, 1653, 1683
BmrFI	CCNGG	4 cut(s)	7, 296, 394, 902
BmsI	GCATC	7 cut(s)	292, 589, 777, 796, 1084, 1752, 1860
BplI	GAGNNNNNCTC	2 cut(s)	1812, 1844
BpmI	CTGGAG	5 cut(s)	376, 1502, 1568, 1638, 1668
BpuEI	CTTGAG	3 cut(s)	209, 389, 1253
Bsa29I	ATCGAT	1 cut(s)	501
BsaAI	YACGTR	1 cut(s)	179
BsaBI	GATNNNNATC	1 cut(s)	210
BsaI	GGTCTC	1 cut(s)	434
BsaJI	CCNNGG	3 cut(s)	144, 1150, 1789
BsaWI	WCCGGW	2 cut(s)	470, 1134
BsaXI	ACNNNNNCTCC	2 cut(s)	1722, 1752
Bsc4I	CCNNNNNNNGG	5 cut(s)	234, 247, 295, 470, 634
Bse118I	RCCGGY	1 cut(s)	470
Bse1I	ACTGG	3 cut(s)	333, 1019, 1519
Bse8I	GATNNNNATC	1 cut(s)	210
BseBI	CCWGG	4 cut(s)	7, 296, 394, 902
BseCI	ATCGAT	1 cut(s)	501
BseDI	CCNNGG	3 cut(s)	144, 1150, 1789
BseGI	GGATG	3 cut(s)	304, 1232, 1903
BseJI	GATNNNNATC	1 cut(s)	210
BseLI	CCNNNNNNNGG	5 cut(s)	234, 247, 295, 470, 634
BseMII	CTCAG	4 cut(s)	468, 879, 1433, 1845
BseNI	ACTGG	3 cut(s)	333, 1019, 1519
BseRI	GAGGAG	4 cut(s)	707, 1167, 1778, 1833
BseXI	GCAGC	6 cut(s)	182, 185, 393, 767, 802, 1060
BsgI	GTGCAG	1 cut(s)	792
BshFI	GGCC	4 cut(s)	227, 565, 665, 766
BshTI	ACCGGT	1 cut(s)	470
BshVI	ATCGAT	1 cut(s)	501
BsiHKAI	GWGCWC	2 cut(s)	1134, 1359
BsiHKCI	CYCGRG	1 cut(s)	1052
BsiSI	CCGG	2 cut(s)	471, 1135
BslFI	GGGAC	1 cut(s)	374
BslI	CCNNNNNNNGG	5 cut(s)	234, 247, 295, 470, 634
BsmAI	GTCTC	6 cut(s)	54, 394, 434, 677, 1162, 1716
BsmFI	GGGAC	1 cut(s)	374
BsmI	GAATGC	2 cut(s)	305, 1063
BsnI	GGCC	4 cut(s)	227, 565, 665, 766
Bso31I	GGTCTC	1 cut(s)	434
BsoBI	CYCGRG	1 cut(s)	1052
Bsp1286I	GDGCHC	3 cut(s)	747, 1134, 1359
Bsp143I	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
BspACI	CCGC	3 cut(s)	379, 1198, 1314
BspANI	GGCC	4 cut(s)	227, 565, 665, 766
BspCNI	CTCAG	4 cut(s)	467, 880, 1434, 1844
BspDI	ATCGAT	1 cut(s)	501
BspLI	GGNNCC	5 cut(s)	213, 239, 922, 1653, 1683
BspMI	ACCTGC	1 cut(s)	73
BspPI	GGATC	5 cut(s)	63, 206, 219, 915, 928
BspTI	CTTAAG	1 cut(s)	1141
BspTNI	GGTCTC	1 cut(s)	434
BsrFI	RCCGGY	1 cut(s)	470
BsrI	ACTGG	3 cut(s)	333, 1019, 1519
BssAI	RCCGGY	1 cut(s)	470
BssECI	CCNNGG	3 cut(s)	144, 1150, 1789
BssMI	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
BssSI	CACGAG	1 cut(s)	1251
BssT1I	CCWWGG	1 cut(s)	144
Bst2BI	CACGAG	1 cut(s)	1251
Bst2UI	CCWGG	4 cut(s)	7, 296, 394, 902
Bst4CI	ACNGT	5 cut(s)	688, 1097, 1400, 1870, 1947
Bst6I	CTCTTC	1 cut(s)	514
BstAFI	CTTAAG	1 cut(s)	1141
BstBAI	YACGTR	1 cut(s)	179
BstC8I	GCNNGC	7 cut(s)	572, 764, 822, 898, 1198, 1319, 1560
BstDEI	CTNAG	5 cut(s)	454, 888, 1205, 1442, 1831
BstENI	CCTNNNNNAGG	1 cut(s)	232
BstF5I	GGATG	3 cut(s)	304, 1232, 1903
BstHHI	GCGC	1 cut(s)	1884
BstKTI	GATC	8 cut(s)	58, 208, 214, 501, 923, 978, 997, 1837
BstMAI	GTCTC	6 cut(s)	54, 394, 434, 677, 1162, 1716
BstMBI	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
BstMWI	GCNNNNNNNGC	4 cut(s)	571, 1197, 1475, 1804
BstNI	CCWGG	4 cut(s)	7, 296, 394, 902
BstNSI	RCATGY	2 cut(s)	900, 1321
BstSCI	CCNGG	4 cut(s)	5, 294, 392, 900
BstV1I	GCAGC	6 cut(s)	182, 185, 393, 767, 802, 1060
BstX2I	RGATCY	5 cut(s)	55, 205, 211, 920, 1834
BstYI	RGATCY	5 cut(s)	55, 205, 211, 920, 1834
Bsu15I	ATCGAT	1 cut(s)	501
BsuI	GTATCC	2 cut(s)	177, 1457
BsuRI	GGCC	4 cut(s)	227, 565, 665, 766
BsuTUI	ATCGAT	1 cut(s)	501
BtsCI	GGATG	3 cut(s)	304, 1232, 1903
BtsI	GCAGTG	1 cut(s)	271
BtsIMutI	CAGTG	2 cut(s)	271, 326
BveI	ACCTGC	1 cut(s)	73
Cac8I	GCNNGC	7 cut(s)	572, 764, 822, 898, 1198, 1319, 1560
CfoI	GCGC	1 cut(s)	1884
Cfr10I	RCCGGY	1 cut(s)	470
Cfr13I	GGNCC	1 cut(s)	564
ClaI	ATCGAT	1 cut(s)	501
CseI	GACGC	1 cut(s)	1024
Csp6I	GTAC	3 cut(s)	515, 1138, 1860
CspAI	ACCGGT	1 cut(s)	470
CspCI	CAANNNNNGTGG	2 cut(s)	1704, 1739
CviAII	CATG	6 cut(s)	118, 897, 992, 1318, 1536, 1648
CviQI	GTAC	3 cut(s)	515, 1138, 1860
DdeI	CTNAG	5 cut(s)	454, 888, 1205, 1442, 1831
DpnI	GATC	8 cut(s)	57, 207, 213, 500, 922, 977, 996, 1836
DpnII	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
EaeI	YGGCCR	1 cut(s)	663
Eam1104I	CTCTTC	1 cut(s)	514
EarI	CTCTTC	1 cut(s)	514
Ecl136II	GAGCTC	1 cut(s)	1132
Eco130I	CCWWGG	1 cut(s)	144
Eco147I	AGGCCT	2 cut(s)	227, 766
Eco24I	GRGCYC	2 cut(s)	747, 1134
Eco31I	GGTCTC	1 cut(s)	434
Eco53kI	GAGCTC	1 cut(s)	1132
Eco57I	CTGAAG	2 cut(s)	615, 891
Eco72I	CACGTG	1 cut(s)	179
Eco88I	CYCGRG	1 cut(s)	1052
EcoICRI	GAGCTC	1 cut(s)	1132
EcoNI	CCTNNNNNAGG	1 cut(s)	232
EcoO109I	RGGNCCY	1 cut(s)	564
EcoRI	GAATTC	2 cut(s)	1100, 1492
EcoRII	CCWGG	4 cut(s)	5, 294, 392, 900
EcoT14I	CCWWGG	1 cut(s)	144
EcoT22I	ATGCAT	1 cut(s)	307
EcoT38I	GRGCYC	2 cut(s)	747, 1134
ErhI	CCWWGG	1 cut(s)	144
FaeI	CATG	6 cut(s)	121, 900, 995, 1321, 1539, 1651
FaqI	GGGAC	1 cut(s)	374
FatI	CATG	6 cut(s)	117, 896, 991, 1317, 1535, 1647
FauI	CCCGC	2 cut(s)	386, 1205
FbaI	TGATCA	1 cut(s)	975
Fnu4HI	GCNGC	7 cut(s)	171, 174, 382, 781, 791, 1049, 1315
FokI	GGATG	3 cut(s)	311, 1239, 1910
FriOI	GRGCYC	2 cut(s)	747, 1134
Fsp4HI	GCNGC	7 cut(s)	171, 174, 382, 781, 791, 1049, 1315
FspBI	CTAG	6 cut(s)	548, 768, 1161, 1286, 1406, 2026
GlaI	GCGC	1 cut(s)	1883
GluI	GCNGC	7 cut(s)	171, 174, 382, 781, 791, 1049, 1315
GsuI	CTGGAG	5 cut(s)	376, 1502, 1568, 1638, 1668
HaeIII	GGCC	4 cut(s)	227, 565, 665, 766
HapII	CCGG	2 cut(s)	471, 1135
HgaI	GACGC	1 cut(s)	1024
HhaI	GCGC	1 cut(s)	1884
Hin1II	CATG	6 cut(s)	121, 900, 995, 1321, 1539, 1651
Hin6I	GCGC	1 cut(s)	1882
HinP1I	GCGC	1 cut(s)	1882
HindIII	AAGCTT	1 cut(s)	365
HinfI	GANTC	7 cut(s)	404, 452, 676, 1155, 1164, 1209, 1709
HpaII	CCGG	2 cut(s)	471, 1135
HphI	GGTGA	2 cut(s)	485, 1588
Hpy166II	GTNNAC	1 cut(s)	1976
Hpy8I	GTNNAC	1 cut(s)	1976
HpyCH4III	ACNGT	5 cut(s)	688, 1097, 1400, 1870, 1947
HpyCH4IV	ACGT	2 cut(s)	111, 178
HpyCH4V	TGCA	9 cut(s)	170, 305, 773, 783, 790, 824, 1048, 1191, 1562
HpyF10VI	GCNNNNNNNGC	4 cut(s)	571, 1197, 1475, 1804
HpyF3I	CTNAG	5 cut(s)	454, 888, 1205, 1442, 1831
HpySE526I	ACGT	2 cut(s)	111, 178
Hsp92II	CATG	6 cut(s)	121, 900, 995, 1321, 1539, 1651
HspAI	GCGC	1 cut(s)	1882
Ksp22I	TGATCA	1 cut(s)	975
Kzo9I	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
LmnI	GCTCC	6 cut(s)	759, 1137, 1521, 1657, 1687, 1791
Lsp1109I	GCAGC	6 cut(s)	182, 185, 393, 767, 802, 1060
LweI	GCATC	7 cut(s)	292, 589, 777, 796, 1084, 1752, 1860
MaeI	CTAG	6 cut(s)	548, 768, 1161, 1286, 1406, 2026
MaeII	ACGT	2 cut(s)	111, 178
MaeIII	GTNAC	7 cut(s)	19, 85, 1521, 1539, 1594, 1841, 1949
MalI	GATC	8 cut(s)	57, 207, 213, 500, 922, 977, 996, 1836
MboI	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
MfeI	CAATTG	1 cut(s)	1855
MflI	RGATCY	5 cut(s)	55, 205, 211, 920, 1834
MhlI	GDGCHC	3 cut(s)	747, 1134, 1359
MlyI	GAGTC	4 cut(s)	446, 685, 1164, 1718
MmeI	TCCRAC	2 cut(s)	619, 1368
Mph1103I	ATGCAT	1 cut(s)	307
MroXI	GAANNNNTTC	3 cut(s)	707, 1431, 1662
MseI	TTAA	2 cut(s)	623, 1142
MspA1I	CMGCKG	1 cut(s)	780
MspCI	CTTAAG	1 cut(s)	1141
MspI	CCGG	2 cut(s)	471, 1135
MspR9I	CCNGG	4 cut(s)	7, 296, 394, 902
MunI	CAATTG	1 cut(s)	1855
Mva1269I	GAATGC	2 cut(s)	305, 1063
MvaI	CCWGG	4 cut(s)	7, 296, 394, 902
MwoI	GCNNNNNNNGC	4 cut(s)	571, 1197, 1475, 1804
NdeII	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
NlaIII	CATG	6 cut(s)	121, 900, 995, 1321, 1539, 1651
NlaIV	GGNNCC	5 cut(s)	213, 239, 922, 1653, 1683
NmuCI	GTSAC	5 cut(s)	85, 1521, 1539, 1594, 1841
NsiI	ATGCAT	1 cut(s)	307
NspI	RCATGY	2 cut(s)	900, 1321
PaeI	GCATGC	2 cut(s)	900, 1321
PceI	AGGCCT	2 cut(s)	227, 766
PctI	GAATGC	2 cut(s)	305, 1063
PdmI	GAANNNNTTC	3 cut(s)	707, 1431, 1662
PfeI	GAWTC	3 cut(s)	404, 1164, 1209
PflMI	CCANNNNNTGG	1 cut(s)	295
PinAI	ACCGGT	1 cut(s)	470
PkrI	GCNGC	7 cut(s)	172, 175, 383, 782, 792, 1050, 1316
PleI	GAGTC	4 cut(s)	446, 684, 1163, 1717
PmaCI	CACGTG	1 cut(s)	179
PmlI	CACGTG	1 cut(s)	179
PpsI	GAGTC	4 cut(s)	446, 684, 1163, 1717
Ppu21I	YACGTR	1 cut(s)	179
Psp124BI	GAGCTC	1 cut(s)	1134
Psp6I	CCWGG	4 cut(s)	5, 294, 392, 900
PspCI	CACGTG	1 cut(s)	179
PspGI	CCWGG	4 cut(s)	5, 294, 392, 900
PspN4I	GGNNCC	5 cut(s)	213, 239, 922, 1653, 1683
PspPI	GGNCC	1 cut(s)	564
PsrI	GAACNNNNNNTAC	1 cut(s)	36
PsuI	RGATCY	5 cut(s)	55, 205, 211, 920, 1834
PvuII	CAGCTG	1 cut(s)	780
RsaI	GTAC	3 cut(s)	516, 1139, 1861
RsaNI	GTAC	3 cut(s)	515, 1138, 1860
SacI	GAGCTC	1 cut(s)	1134
SaqAI	TTAA	2 cut(s)	623, 1142
SatI	GCNGC	7 cut(s)	171, 174, 382, 781, 791, 1049, 1315
Sau3AI	GATC	8 cut(s)	55, 205, 211, 498, 920, 975, 994, 1834
Sau96I	GGNCC	1 cut(s)	564
SchI	GAGTC	4 cut(s)	446, 685, 1164, 1718
ScrFI	CCNGG	4 cut(s)	7, 296, 394, 902
SduI	GDGCHC	3 cut(s)	747, 1134, 1359
SfaNI	GCATC	7 cut(s)	292, 589, 777, 796, 1084, 1752, 1860
SmlI	CTYRAG	4 cut(s)	188, 368, 1141, 1268
SmoI	CTYRAG	4 cut(s)	188, 368, 1141, 1268
SphI	GCATGC	2 cut(s)	900, 1321
SseBI	AGGCCT	2 cut(s)	227, 766
SsiI	CCGC	3 cut(s)	379, 1198, 1314
SspMI	CTAG	6 cut(s)	548, 768, 1161, 1286, 1406, 2026
SstI	GAGCTC	1 cut(s)	1134
StuI	AGGCCT	2 cut(s)	227, 766
StyD4I	CCNGG	4 cut(s)	5, 294, 392, 900
StyI	CCWWGG	1 cut(s)	144
TaaI	ACNGT	5 cut(s)	688, 1097, 1400, 1870, 1947
TaiI	ACGT	2 cut(s)	114, 181
TaqI	TCGA	6 cut(s)	198, 501, 843, 849, 1083, 1980
TatI	WGTACW	1 cut(s)	1859
TauI	GCSGC	1 cut(s)	1317
TfiI	GAWTC	3 cut(s)	404, 1164, 1209
Tru1I	TTAA	2 cut(s)	623, 1142
Tru9I	TTAA	2 cut(s)	623, 1142
TscAI	CASTG	2 cut(s)	271, 333
TseFI	GTSAC	5 cut(s)	85, 1521, 1539, 1594, 1841
TseI	GCWGC	6 cut(s)	170, 173, 381, 780, 790, 1048
Tsp45I	GTSAC	5 cut(s)	85, 1521, 1539, 1594, 1841
TspDTI	ATGAA	7 cut(s)	18, 54, 640, 1043, 1636, 1709, 1914
TspGWI	ACGGA	3 cut(s)	574, 791, 920
TspRI	CASTG	2 cut(s)	271, 333
Van91I	CCANNNNNTGG	1 cut(s)	295
Vha464I	CTTAAG	1 cut(s)	1141
XagI	CCTNNNNNAGG	1 cut(s)	232
XapI	RAATTY	5 cut(s)	350, 707, 719, 1100, 1492
XbaI	TCTAGA	2 cut(s)	547, 1160
XceI	RCATGY	2 cut(s)	900, 1321
XcmI	CCANNNNNNNNNTGG	1 cut(s)	635
XmnI	GAANNNNTTC	3 cut(s)	707, 1431, 1662
XspI	CTAG	6 cut(s)	548, 768, 1161, 1286, 1406, 2026
Zsp2I	ATGCAT	1 cut(s)	307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.