Rorug05G0074400
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
6413132 .. 6416305
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0074400.1

Sequence Viewer

Length: 1365 bp
ATGAGTTCACCAAACCTTGAACAGAGACTTCAAACGTTAGCACGACATTTCAGACTCCAGAGACAAGTCAAGCCCGGTGTACCAACCACCGCCGGTTCGACCGGCCGAGCTGCCGTTCTGGTGTGTCTCTTCCAAGGCGACGACGGTGACCTGCGGGTCATTCTAACAAAGCGAGCCTCGACTCTCTCTTCTCACTCTGGCGAAGTTTCGCTCCCCGGCGGGAAAAGAGAGGGGGGTGACGGTGATGACGTGGACACGGCTCTCCGGGAGGCCAAGGAGGAGATTGGATTGGAGCCTTCACATGTCGATGTTGTTGCTGTTCTTGAACCCTTTGTGAACAAGCAAGGAATGCCAGTTATTCCGGTTGTTGGCATACTTAATGTAAAGGAAGCTTTCAAGCCAGCTCCAAATCCTGCTGAAGTGGAAGCAGTATTTGATGCTCCGATGGAAATGTTCATCAAGGATGAGAACCGGAGAGTAGAGATGAGAGAGTGGATGGGGAACAAGTATCTGATTCAGATCTTTGACTATGAAATGAAGAATAAGAAGTACAAAATATGGGGGTTAACTGCTAGTATATTGATAAGGGCTGCATCAATTGCATACGAACGACCACCACCTTTTGTAGAGCAAAATCCCAGTTATAAGGTTGCTTTTGGTGTAGAAAGTGAAGATAATCAAATGGGTTCAAGCAACCTTGAACAGAGACTCCAAATTTTAGCACAAGATTTTAGACTCCAGAAACCAGTCAACCCTGGTCTATCACCTACCAGTACAACTGGCTCGATCAAAAGAGCTGCGGTTCTGGTGTGTCTATTCCAAGGGGAAGAGGGTGACCTGCACGTTATTCTCACAAAGCGAGCCTCAACTCTCTCTTCTCACTCTGGTGAGGTGGCTCTCCCCGGCGGTAAAAGAGAGCAAGGTGATGCTGATGATGTGGACACAGCTCTCCGGGAGGCCAAGGAAGAGATTGGCTTAGACCCTTCCCAAGTCAACATTGTCACCATTCTTGAACCTTTTGTAAACAAGCTAGGTATGACAGTGGTTCCTGTAATTGGCTTACTTTCTAACAAGGAAGCATTTAATCCAGCTCCAAATGCTGCAGAAGTGGAAGCAATCTTTTATGCTCCCTTAGAAATGTTTCTCAAGGATGAGAACAGAAGAGCAGAGGAGAGAGAATGGATGGGAGACAAATATCTGTTACAACATTTCTACTTTGAAGCTCATGGTATAGAGTATGACATATGGGCTATAACTGCTGGAATTCTGATCAAGGCTGCTTCGATTGTCTACCAGCGCCAGCCAGCATTTCTTGAACAGAGACCGAAATTTTGGAGTGGAACTGCTCATAATACCACAGCCTAG

Protein Analysis

454

Amino Acids

50.27

Weight (kDa)

5.35

Isoelectric Point (pI)

51.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NUDIX PF00293 36 - 158 3.3e-12 NUDIX domain
NUDIX PF00293 264 - 391 1.3e-12 NUDIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011388)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 645
AasI GACNNNNNNGTC 1 cut(s) 155
Acc36I ACCTGC 2 cut(s) 159, 846
AccI GTMKAC 1 cut(s) 1290
AciI CCGC 5 cut(s) 90, 154, 219, 800, 906
AclI AACGTT 1 cut(s) 35
AcoI YGGCCR 1 cut(s) 103
AcsI RAATTY 3 cut(s) 714, 1263, 1328
AcuI CTGAAG 1 cut(s) 438
AfaI GTAC 3 cut(s) 81, 551, 775
AfiI CCNNNNNNNGG 2 cut(s) 368, 1055
AflIII ACRYGT 1 cut(s) 301
AgsI TTSAA 9 cut(s) 20, 32, 326, 397, 690, 701, 1013, 1220, 1316
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 1 cut(s) 754
AleI CACNNNNGTG 1 cut(s) 885
AloI GAACNNNNNNTCC 2 cut(s) 693, 725
AluBI AGCT 8 cut(s) 110, 392, 404, 797, 947, 1030, 1091, 1223
AluI AGCT 8 cut(s) 110, 392, 404, 797, 947, 1030, 1091, 1223
Alw26I GTCTC 6 cut(s) 19, 55, 131, 700, 1182, 1315
AoxI GGCC 3 cut(s) 103, 270, 957
ApeKI GCWGC 5 cut(s) 110, 590, 797, 1100, 1277
ApoI RAATTY 3 cut(s) 714, 1263, 1328
ArsI GACNNNNNNTTYG 2 cut(s) 1314, 1346
Asp700I GAANNNNTTC 1 cut(s) 1140
AspLEI GCGC 1 cut(s) 1299
AsuC2I CCSGG 5 cut(s) 75, 216, 266, 903, 953
AsuHPI GGTGA 8 cut(s) 158, 248, 254, 756, 845, 899, 935, 994
BbvI GCAGC 5 cut(s) 97, 577, 784, 1087, 1264
BccI CCATC 3 cut(s) 439, 490, 1177
BceAI ACGGC 2 cut(s) 98, 273
BcgI CGANNNNNNTGC 2 cut(s) 296, 330
BciT130I CCWGG 1 cut(s) 756
BclI TGATCA 1 cut(s) 1269
BcnI CCSGG 5 cut(s) 75, 216, 266, 903, 953
BcoDI GTCTC 6 cut(s) 19, 55, 131, 700, 1182, 1315
BfaI CTAG 3 cut(s) 573, 1031, 1363
BfmI CTRYAG 1 cut(s) 1101
BfoI RGCGCY 1 cut(s) 1300
BfuAI ACCTGC 2 cut(s) 159, 846
BglII AGATCT 1 cut(s) 519
BisI GCNGC 5 cut(s) 111, 591, 798, 1101, 1278
BlsI GCNGC 5 cut(s) 112, 592, 799, 1102, 1279
Bme1390I CCNGG 6 cut(s) 75, 216, 266, 756, 903, 953
BmgBI CACGTC 1 cut(s) 250
BmiI GGNNCC 2 cut(s) 294, 1047
BmrFI CCNGG 6 cut(s) 75, 216, 266, 756, 903, 953
BmrI ACTGGG 1 cut(s) 633
BmsI GCATC 3 cut(s) 427, 602, 916
BmuI ACTGGG 1 cut(s) 633
BpmI CTGGAG 2 cut(s) 41, 722
BpuEI CTTGAG 1 cut(s) 1130
BpuMI CCSGG 5 cut(s) 75, 216, 266, 903, 953
BsaBI GATNNNNATC 1 cut(s) 518
BsaI GGTCTC 1 cut(s) 1315
BsaJI CCNNGG 7 cut(s) 133, 214, 273, 754, 820, 901, 960
BsaWI WCCGGW 2 cut(s) 361, 471
BsaXI ACNNNNNCTCC 2 cut(s) 693, 723
Bsc4I CCNNNNNNNGG 2 cut(s) 368, 1055
Bse118I RCCGGY 2 cut(s) 92, 101
Bse1I ACTGG 5 cut(s) 353, 639, 746, 771, 784
Bse8I GATNNNNATC 1 cut(s) 518
BseBI CCWGG 1 cut(s) 756
BseDI CCNNGG 7 cut(s) 133, 214, 273, 754, 820, 901, 960
BseGI GGATG 4 cut(s) 469, 501, 1156, 1188
BseJI GATNNNNATC 1 cut(s) 518
BseLI CCNNNNNNNGG 2 cut(s) 368, 1055
BseNI ACTGG 5 cut(s) 353, 639, 746, 771, 784
BseRI GAGGAG 2 cut(s) 293, 1184
BseX3I CGGCCG 1 cut(s) 103
BseXI GCAGC 5 cut(s) 97, 577, 784, 1087, 1264
BsgI GTGCAG 1 cut(s) 824
Bsh1285I CGRYCG 2 cut(s) 102, 106
BshFI GGCC 3 cut(s) 105, 272, 959
BsiEI CGRYCG 2 cut(s) 102, 106
BsiSI CCGG 9 cut(s) 75, 93, 102, 216, 265, 362, 472, 903, 952
BslI CCNNNNNNNGG 2 cut(s) 368, 1055
BsmAI GTCTC 6 cut(s) 19, 55, 131, 700, 1182, 1315
BsmI GAATGC 1 cut(s) 354
BsnI GGCC 3 cut(s) 105, 272, 959
Bso31I GGTCTC 1 cut(s) 1315
Bsp143I GATC 3 cut(s) 519, 786, 1269
BspACI CCGC 5 cut(s) 90, 154, 219, 800, 906
BspANI GGCC 3 cut(s) 105, 272, 959
BspLI GGNNCC 2 cut(s) 294, 1047
BspMAI CTGCAG 1 cut(s) 1105
BspMI ACCTGC 2 cut(s) 159, 846
BspQI GCTCTTC 1 cut(s) 1156
BspTNI GGTCTC 1 cut(s) 1315
BsrFI RCCGGY 2 cut(s) 92, 101
BsrI ACTGG 5 cut(s) 353, 639, 746, 771, 784
BssAI RCCGGY 2 cut(s) 92, 101
BssECI CCNNGG 7 cut(s) 133, 214, 273, 754, 820, 901, 960
BssMI GATC 3 cut(s) 519, 786, 1269
BssT1I CCWWGG 4 cut(s) 133, 273, 820, 960
Bst2UI CCWGG 1 cut(s) 756
Bst4CI ACNGT 3 cut(s) 146, 242, 1042
Bst6I CTCTTC 6 cut(s) 134, 193, 822, 880, 960, 1156
BstAPI GCANNNNNTGC 2 cut(s) 349, 599
BstC8I GCNNGC 5 cut(s) 174, 402, 861, 1301, 1305
BstDEI CTNAG 2 cut(s) 976, 1132
BstEII GGTNACC 2 cut(s) 146, 833
BstF5I GGATG 4 cut(s) 469, 501, 1156, 1188
BstH2I RGCGCY 1 cut(s) 1300
BstHHI GCGC 1 cut(s) 1299
BstKTI GATC 3 cut(s) 522, 789, 1272
BstMAI GTCTC 6 cut(s) 19, 55, 131, 700, 1182, 1315
BstMBI GATC 3 cut(s) 519, 786, 1269
BstMCI CGRYCG 2 cut(s) 102, 106
BstMWI GCNNNNNNNGC 4 cut(s) 349, 599, 1097, 1256
BstNI CCWGG 1 cut(s) 756
BstNSI RCATGY 1 cut(s) 305
BstPI GGTNACC 2 cut(s) 146, 833
BstSCI CCNGG 6 cut(s) 73, 214, 264, 754, 901, 951
BstSFI CTRYAG 1 cut(s) 1101
BstV1I GCAGC 5 cut(s) 97, 577, 784, 1087, 1264
BstX2I RGATCY 1 cut(s) 519
BstYI RGATCY 1 cut(s) 519
BstZI CGGCCG 1 cut(s) 103
BsuRI GGCC 3 cut(s) 105, 272, 959
BtrI CACGTC 1 cut(s) 250
BtsCI GGATG 4 cut(s) 469, 501, 1156, 1188
BtsIMutI CAGTG 1 cut(s) 1047
BveI ACCTGC 2 cut(s) 159, 846
Cac8I GCNNGC 5 cut(s) 174, 402, 861, 1301, 1305
CfoI GCGC 1 cut(s) 1299
Cfr10I RCCGGY 2 cut(s) 92, 101
Csp6I GTAC 3 cut(s) 80, 550, 774
CviAII CATG 2 cut(s) 302, 1226
CviQI GTAC 3 cut(s) 80, 550, 774
DdeI CTNAG 2 cut(s) 976, 1132
DpnI GATC 3 cut(s) 521, 788, 1271
DpnII GATC 3 cut(s) 519, 786, 1269
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 1 cut(s) 103
EagI CGGCCG 1 cut(s) 103
Eam1104I CTCTTC 6 cut(s) 134, 193, 822, 880, 960, 1156
EarI CTCTTC 6 cut(s) 134, 193, 822, 880, 960, 1156
EclXI CGGCCG 1 cut(s) 103
Eco130I CCWWGG 4 cut(s) 133, 273, 820, 960
Eco31I GGTCTC 1 cut(s) 1315
Eco52I CGGCCG 1 cut(s) 103
Eco57I CTGAAG 1 cut(s) 438
Eco91I GGTNACC 2 cut(s) 146, 833
EcoO65I GGTNACC 2 cut(s) 146, 833
EcoRI GAATTC 1 cut(s) 1263
EcoRII CCWGG 1 cut(s) 754
EcoT14I CCWWGG 4 cut(s) 133, 273, 820, 960
ErhI CCWWGG 4 cut(s) 133, 273, 820, 960
FaeI CATG 2 cut(s) 305, 1229
FatI CATG 2 cut(s) 301, 1225
FauI CCCGC 2 cut(s) 147, 212
FauNDI CATATG 1 cut(s) 1244
FbaI TGATCA 1 cut(s) 1269
FblI GTMKAC 1 cut(s) 1290
Fnu4HI GCNGC 5 cut(s) 111, 591, 798, 1101, 1278
FokI GGATG 4 cut(s) 476, 508, 1163, 1195
Fsp4HI GCNGC 5 cut(s) 111, 591, 798, 1101, 1278
FspBI CTAG 3 cut(s) 573, 1031, 1363
GlaI GCGC 1 cut(s) 1298
GluI GCNGC 5 cut(s) 111, 591, 798, 1101, 1278
GsuI CTGGAG 2 cut(s) 41, 722
HaeII RGCGCY 1 cut(s) 1300
HaeIII GGCC 3 cut(s) 105, 272, 959
HapII CCGG 9 cut(s) 75, 93, 102, 216, 265, 362, 472, 903, 952
HhaI GCGC 1 cut(s) 1299
Hin1II CATG 2 cut(s) 305, 1229
Hin6I GCGC 1 cut(s) 1297
HinP1I GCGC 1 cut(s) 1297
HincII GTYRAC 3 cut(s) 567, 751, 994
HindII GTYRAC 3 cut(s) 567, 751, 994
HindIII AAGCTT 1 cut(s) 390
HinfI GANTC 5 cut(s) 54, 181, 514, 708, 735
HpaI GTTAAC 1 cut(s) 567
HpaII CCGG 9 cut(s) 75, 93, 102, 216, 265, 362, 472, 903, 952
HphI GGTGA 8 cut(s) 158, 248, 254, 756, 845, 899, 935, 994
Hpy188I TCNGA 5 cut(s) 53, 444, 513, 519, 1269
Hpy188III TCNNGA 5 cut(s) 58, 323, 739, 1010, 1313
Hpy99I CGWCG 2 cut(s) 143, 146
HpyAV CCTTC 2 cut(s) 306, 993
HpyCH4III ACNGT 3 cut(s) 146, 242, 1042
HpyCH4IV ACGT 3 cut(s) 35, 249, 843
HpyCH4V TGCA 4 cut(s) 593, 602, 841, 1103
HpyF10VI GCNNNNNNNGC 4 cut(s) 349, 599, 1097, 1256
HpyF3I CTNAG 2 cut(s) 976, 1132
HpySE526I ACGT 3 cut(s) 35, 249, 843
Hsp92II CATG 2 cut(s) 305, 1229
HspAI GCGC 1 cut(s) 1297
Ksp22I TGATCA 1 cut(s) 1269
KspAI GTTAAC 1 cut(s) 567
Kzo9I GATC 3 cut(s) 519, 786, 1269
LguI GCTCTTC 1 cut(s) 1156
LmnI GCTCC 6 cut(s) 216, 292, 409, 445, 1096, 1132
Lsp1109I GCAGC 5 cut(s) 97, 577, 784, 1087, 1264
LweI GCATC 3 cut(s) 427, 602, 916
MaeI CTAG 3 cut(s) 573, 1031, 1363
MaeII ACGT 3 cut(s) 35, 249, 843
MaeIII GTNAC 5 cut(s) 146, 236, 833, 1000, 1200
MalI GATC 3 cut(s) 521, 788, 1271
MboI GATC 3 cut(s) 519, 786, 1269
MboII GAAGA 8 cut(s) 121, 180, 550, 683, 839, 867, 977, 1173
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 1 cut(s) 519
MluCI AATT 5 cut(s) 597, 714, 1053, 1263, 1328
MlyI GAGTC 4 cut(s) 48, 175, 702, 729
MnlI CCTC 9 cut(s) 187, 223, 262, 271, 823, 874, 883, 949, 1162
MroXI GAANNNNTTC 1 cut(s) 1140
MseI TTAA 3 cut(s) 378, 566, 1083
MslI CAYNNNNRTG 2 cut(s) 306, 885
MspI CCGG 9 cut(s) 75, 93, 102, 216, 265, 362, 472, 903, 952
MspR9I CCNGG 6 cut(s) 75, 216, 266, 756, 903, 953
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 1 cut(s) 354
MvaI CCWGG 1 cut(s) 756
MwoI GCNNNNNNNGC 4 cut(s) 349, 599, 1097, 1256
NciI CCSGG 5 cut(s) 75, 216, 266, 903, 953
NdeI CATATG 1 cut(s) 1244
NdeII GATC 3 cut(s) 519, 786, 1269
NlaIII CATG 2 cut(s) 305, 1229
NlaIV GGNNCC 2 cut(s) 294, 1047
NmeAIII GCCGAG 1 cut(s) 131
NmuCI GTSAC 4 cut(s) 146, 236, 833, 1000
NspI RCATGY 1 cut(s) 305
OliI CACNNNNGTG 1 cut(s) 885
PciI ACATGT 1 cut(s) 301
PciSI GCTCTTC 1 cut(s) 1156
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 1 cut(s) 354
PdmI GAANNNNTTC 1 cut(s) 1140
PfeI GAWTC 1 cut(s) 514
PfoI TCCNGGA 2 cut(s) 264, 951
PkrI GCNGC 5 cut(s) 112, 592, 799, 1102, 1279
PleI GAGTC 4 cut(s) 48, 175, 702, 729
PpsI GAGTC 4 cut(s) 48, 175, 702, 729
PscI ACATGT 1 cut(s) 301
PsiI TTATAA 1 cut(s) 645
Psp1406I AACGTT 1 cut(s) 35
Psp6I CCWGG 1 cut(s) 754
PspEI GGTNACC 2 cut(s) 146, 833
PspGI CCWGG 1 cut(s) 754
PspN4I GGNNCC 2 cut(s) 294, 1047
PstI CTGCAG 1 cut(s) 1105
PsuI RGATCY 1 cut(s) 519
RsaI GTAC 3 cut(s) 81, 551, 775
RsaNI GTAC 3 cut(s) 80, 550, 774
RseI CAYNNNNRTG 2 cut(s) 306, 885
SapI GCTCTTC 1 cut(s) 1156
SaqAI TTAA 3 cut(s) 378, 566, 1083
SatI GCNGC 5 cut(s) 111, 591, 798, 1101, 1278
Sau3AI GATC 3 cut(s) 519, 786, 1269
SchI GAGTC 4 cut(s) 48, 175, 702, 729
ScrFI CCNGG 6 cut(s) 75, 216, 266, 756, 903, 953
SfaNI GCATC 3 cut(s) 427, 602, 916
SfcI CTRYAG 1 cut(s) 1101
SmiMI CAYNNNNRTG 2 cut(s) 306, 885
SmlI CTYRAG 1 cut(s) 1145
SmoI CTYRAG 1 cut(s) 1145
Sse9I AATT 5 cut(s) 597, 714, 1053, 1263, 1328
SsiI CCGC 5 cut(s) 90, 154, 219, 800, 906
SspMI CTAG 3 cut(s) 573, 1031, 1363
StyD4I CCNGG 6 cut(s) 73, 214, 264, 754, 901, 951
StyI CCWWGG 4 cut(s) 133, 273, 820, 960
TaaI ACNGT 3 cut(s) 146, 242, 1042
TaiI ACGT 3 cut(s) 38, 252, 846
TaqI TCGA 5 cut(s) 98, 179, 306, 785, 1283
TaqII GACCGA 1 cut(s) 1339
TasI AATT 5 cut(s) 597, 714, 1053, 1263, 1328
TatI WGTACW 2 cut(s) 549, 773
TfiI GAWTC 1 cut(s) 514
Tru1I TTAA 3 cut(s) 378, 566, 1083
Tru9I TTAA 3 cut(s) 378, 566, 1083
TscAI CASTG 1 cut(s) 1047
TseFI GTSAC 4 cut(s) 146, 236, 833, 1000
TseI GCWGC 5 cut(s) 110, 590, 797, 1100, 1277
Tsp45I GTSAC 4 cut(s) 146, 236, 833, 1000
TspDTI ATGAA 3 cut(s) 445, 546, 551
TspRI CASTG 1 cut(s) 1047
XapI RAATTY 3 cut(s) 714, 1263, 1328
XceI RCATGY 1 cut(s) 305
XmiI GTMKAC 1 cut(s) 1290
XmnI GAANNNNTTC 1 cut(s) 1140
XspI CTAG 3 cut(s) 573, 1031, 1363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.