Polyadenylate-binding protein-interacting protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53650 AT1G53650 AT3G14450 |
| fragaria_vesca | FvH4_3g16680 FvH4_3g16680 |
| malus_domestica | MD05G1208300.v1.1 MD10G1194800.v1.1 |
| prunus_persica | Prupe.4G149200_v2.0.a1 Prupe.4G149200_v2.0.a1 |
| pyrus_communis | pycom05g19400 pycom10g16820 |
| rosa_chinensis | RchiOBHm_Chr5g0027791 |
| rosa_laevigata | RLG00000033043 |
| rosa_multiflora | Rmu_sc0000920.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00051820 |
| rosa_rugosa | Rorug05G0101100 Rorug05G0101200 |
| rosa_samantha | Rh5AG195400 Rh5BG193700 Rh5CG214000 Rh5DG195700 |
| rosa_wichuraiana | Rw5G017830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 271 |
| AcsI | RAATTY | 1 cut(s) | 278 |
| AgsI | TTSAA | 1 cut(s) | 284 |
| AluBI | AGCT | 3 cut(s) | 68, 129, 140 |
| AluI | AGCT | 3 cut(s) | 68, 129, 140 |
| Alw26I | GTCTC | 1 cut(s) | 40 |
| AoxI | GGCC | 1 cut(s) | 417 |
| ApoI | RAATTY | 1 cut(s) | 278 |
| AsuHPI | GGTGA | 2 cut(s) | 464, 470 |
| BbsI | GAAGAC | 1 cut(s) | 353 |
| BbvCI | CCTCAGC | 1 cut(s) | 141 |
| BcoDI | GTCTC | 1 cut(s) | 40 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmsI | GCATC | 2 cut(s) | 205, 213 |
| BpiI | GAAGAC | 1 cut(s) | 353 |
| Bpu10I | CCTNAGC | 1 cut(s) | 141 |
| BsaJI | CCNNGG | 1 cut(s) | 390 |
| Bse1I | ACTGG | 1 cut(s) | 32 |
| BseDI | CCNNGG | 1 cut(s) | 390 |
| BseGI | GGATG | 1 cut(s) | 478 |
| BseMII | CTCAG | 3 cut(s) | 38, 132, 459 |
| BseNI | ACTGG | 1 cut(s) | 32 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BshFI | GGCC | 1 cut(s) | 419 |
| BsmAI | GTCTC | 1 cut(s) | 40 |
| BsmI | GAATGC | 1 cut(s) | 245 |
| BsnI | GGCC | 1 cut(s) | 419 |
| Bsp19I | CCATGG | 1 cut(s) | 390 |
| BspACI | CCGC | 1 cut(s) | 271 |
| BspANI | GGCC | 1 cut(s) | 419 |
| BspCNI | CTCAG | 3 cut(s) | 37, 133, 460 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BsrI | ACTGG | 1 cut(s) | 32 |
| BssECI | CCNNGG | 1 cut(s) | 390 |
| BssT1I | CCWWGG | 1 cut(s) | 390 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstDEI | CTNAG | 3 cut(s) | 24, 141, 468 |
| BstDSI | CCRYGG | 1 cut(s) | 390 |
| BstF5I | GGATG | 1 cut(s) | 478 |
| BstMAI | GTCTC | 1 cut(s) | 40 |
| BstNSI | RCATGY | 1 cut(s) | 333 |
| BstV2I | GAAGAC | 1 cut(s) | 353 |
| BsuRI | GGCC | 1 cut(s) | 419 |
| BtgI | CCRYGG | 1 cut(s) | 390 |
| BtsCI | GGATG | 1 cut(s) | 478 |
| CviAII | CATG | 3 cut(s) | 330, 391, 421 |
| CviJI | RGCY | 6 cut(s) | 68, 129, 140, 389, 404, 419 |
| CviKI_1 | RGCY | 6 cut(s) | 68, 129, 140, 389, 404, 419 |
| DdeI | CTNAG | 3 cut(s) | 24, 141, 468 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 1 cut(s) | 390 |
| EcoT14I | CCWWGG | 1 cut(s) | 390 |
| ErhI | CCWWGG | 1 cut(s) | 390 |
| FaeI | CATG | 3 cut(s) | 333, 394, 424 |
| FatI | CATG | 3 cut(s) | 329, 390, 420 |
| FauNDI | CATATG | 1 cut(s) | 358 |
| FokI | GGATG | 1 cut(s) | 485 |
| HaeIII | GGCC | 1 cut(s) | 419 |
| Hin1II | CATG | 3 cut(s) | 333, 394, 424 |
| HindIII | AAGCTT | 2 cut(s) | 66, 127 |
| HinfI | GANTC | 1 cut(s) | 20 |
| HphI | GGTGA | 2 cut(s) | 464, 470 |
| Hpy188I | TCNGA | 5 cut(s) | 78, 98, 137, 427, 494 |
| Hpy188III | TCNNGA | 5 cut(s) | 26, 284, 296, 304, 436 |
| HpyAV | CCTTC | 1 cut(s) | 142 |
| HpyCH4V | TGCA | 1 cut(s) | 245 |
| HpyF3I | CTNAG | 3 cut(s) | 24, 141, 468 |
| Hsp92II | CATG | 3 cut(s) | 333, 394, 424 |
| LpnPI | CCDG | 4 cut(s) | 11, 45, 72, 309 |
| LweI | GCATC | 2 cut(s) | 205, 213 |
| MaeIII | GTNAC | 1 cut(s) | 458 |
| MboII | GAAGA | 6 cut(s) | 30, 33, 205, 241, 358, 491 |
| MluCI | AATT | 2 cut(s) | 210, 278 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 301 |
| MseI | TTAA | 2 cut(s) | 131, 171 |
| Mva1269I | GAATGC | 1 cut(s) | 245 |
| NcoI | CCATGG | 1 cut(s) | 390 |
| NdeI | CATATG | 1 cut(s) | 358 |
| NlaIII | CATG | 3 cut(s) | 333, 394, 424 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| NmeAIII | GCCGAG | 1 cut(s) | 430 |
| NmuCI | GTSAC | 1 cut(s) | 458 |
| NspI | RCATGY | 1 cut(s) | 333 |
| PctI | GAATGC | 1 cut(s) | 245 |
| PflFI | GACNNNGTC | 1 cut(s) | 368 |
| PleI | GAGTC | 1 cut(s) | 14 |
| PpsI | GAGTC | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PsyI | GACNNNGTC | 1 cut(s) | 368 |
| SaqAI | TTAA | 2 cut(s) | 131, 171 |
| SchI | GAGTC | 1 cut(s) | 14 |
| SetI | ASST | 8 cut(s) | 70, 122, 131, 142, 179, 205, 321, 372 |
| SfaNI | GCATC | 2 cut(s) | 205, 213 |
| Sse9I | AATT | 2 cut(s) | 210, 278 |
| SsiI | CCGC | 1 cut(s) | 271 |
| StyI | CCWWGG | 1 cut(s) | 390 |
| TasI | AATT | 2 cut(s) | 210, 278 |
| Tru1I | TTAA | 2 cut(s) | 131, 171 |
| Tru9I | TTAA | 2 cut(s) | 131, 171 |
| TseFI | GTSAC | 1 cut(s) | 458 |
| Tsp45I | GTSAC | 1 cut(s) | 458 |
| TspDTI | ATGAA | 1 cut(s) | 492 |
| Tth111I | GACNNNGTC | 1 cut(s) | 368 |
| XapI | RAATTY | 1 cut(s) | 278 |
| XceI | RCATGY | 1 cut(s) | 333 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 79 |