The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity.
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60580 AT5G60580 AT5G60580 AT5G60580 |
| fragaria_vesca | FvH4_3g32510 FvH4_3g32510 FvH4_3g32510 |
| malus_domestica | MD03G1116800.v1.1 MD11G1134800.v1.1 |
| prunus_persica | Prupe.6G100700_v2.0.a1 Prupe.6G100700_v2.0.a1 |
| pyrus_communis | pycom11g11190 |
| rosa_chinensis | RchiOBHm_Chr5g0059571 |
| rosa_laevigata | RLG00000035303 |
| rosa_multiflora | Rmu_sc0001217.1_g000001 Rmu_sc0004068.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00021040 |
| rosa_rugosa | Rorug05G0323100 Rorug05G0323200 |
| rosa_samantha | Rh5AG387800 Rh5BG399800 Rh5CG424000 Rh5DG416100 |
| rosa_wichuraiana | Rw5G036570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 86, 304 |
| AcsI | RAATTY | 1 cut(s) | 359 |
| AfaI | GTAC | 2 cut(s) | 48, 272 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 390 |
| AgsI | TTSAA | 2 cut(s) | 86, 251 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| AlwI | GGATC | 2 cut(s) | 86, 304 |
| ApoI | RAATTY | 1 cut(s) | 359 |
| AseI | ATTAAT | 1 cut(s) | 129 |
| AspS9I | GGNCC | 1 cut(s) | 170 |
| AsuC2I | CCSGG | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| AsuII | TTCGAA | 1 cut(s) | 148 |
| AvaII | GGWCC | 1 cut(s) | 170 |
| BccI | CCATC | 1 cut(s) | 342 |
| BciVI | GTATCC | 1 cut(s) | 207 |
| BcnI | CCSGG | 1 cut(s) | 96 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| BfuI | GTATCC | 1 cut(s) | 207 |
| BmcAI | AGTACT | 1 cut(s) | 272 |
| Bme1390I | CCNGG | 1 cut(s) | 96 |
| Bme18I | GGWCC | 1 cut(s) | 170 |
| BmgT120I | GGNCC | 1 cut(s) | 170 |
| BmrFI | CCNGG | 1 cut(s) | 96 |
| BmsI | GCATC | 2 cut(s) | 214, 296 |
| Bpu14I | TTCGAA | 1 cut(s) | 148 |
| BpuEI | CTTGAG | 1 cut(s) | 287 |
| BpuMI | CCSGG | 1 cut(s) | 96 |
| BsaBI | GATNNNNATC | 2 cut(s) | 75, 222 |
| BsaJI | CCNNGG | 1 cut(s) | 260 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 390 |
| Bse8I | GATNNNNATC | 2 cut(s) | 75, 222 |
| BseDI | CCNNGG | 1 cut(s) | 260 |
| BseJI | GATNNNNATC | 2 cut(s) | 75, 222 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 390 |
| BsiSI | CCGG | 1 cut(s) | 95 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 390 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| BsmI | GAATGC | 1 cut(s) | 289 |
| Bsp119I | TTCGAA | 1 cut(s) | 148 |
| Bsp143I | GATC | 4 cut(s) | 91, 217, 223, 296 |
| BspHI | TCATGA | 1 cut(s) | 61 |
| BspPI | GGATC | 2 cut(s) | 86, 304 |
| BspT104I | TTCGAA | 1 cut(s) | 148 |
| BssECI | CCNNGG | 1 cut(s) | 260 |
| BssMI | GATC | 4 cut(s) | 91, 217, 223, 296 |
| BssT1I | CCWWGG | 1 cut(s) | 260 |
| Bst6I | CTCTTC | 1 cut(s) | 186 |
| BstBI | TTCGAA | 1 cut(s) | 148 |
| BstKTI | GATC | 4 cut(s) | 94, 220, 226, 299 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMBI | GATC | 4 cut(s) | 91, 217, 223, 296 |
| BstSCI | CCNGG | 1 cut(s) | 94 |
| BsuI | GTATCC | 1 cut(s) | 207 |
| CciI | TCATGA | 1 cut(s) | 61 |
| Cfr13I | GGNCC | 1 cut(s) | 170 |
| Csp6I | GTAC | 2 cut(s) | 47, 271 |
| CviAII | CATG | 1 cut(s) | 62 |
| CviJI | RGCY | 1 cut(s) | 265 |
| CviKI_1 | RGCY | 1 cut(s) | 265 |
| CviQI | GTAC | 2 cut(s) | 47, 271 |
| DpnI | GATC | 4 cut(s) | 93, 219, 225, 298 |
| DpnII | GATC | 4 cut(s) | 91, 217, 223, 296 |
| Eam1104I | CTCTTC | 1 cut(s) | 186 |
| EarI | CTCTTC | 1 cut(s) | 186 |
| Eco130I | CCWWGG | 1 cut(s) | 260 |
| Eco47I | GGWCC | 1 cut(s) | 170 |
| EcoT14I | CCWWGG | 1 cut(s) | 260 |
| EcoT22I | ATGCAT | 1 cut(s) | 289 |
| ErhI | CCWWGG | 1 cut(s) | 260 |
| FaeI | CATG | 1 cut(s) | 65 |
| FaiI | YATR | 7 cut(s) | 63, 121, 159, 161, 168, 301, 389 |
| FatI | CATG | 1 cut(s) | 61 |
| HapII | CCGG | 1 cut(s) | 95 |
| Hin1II | CATG | 1 cut(s) | 65 |
| HinfI | GANTC | 1 cut(s) | 56 |
| HpaII | CCGG | 1 cut(s) | 95 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 1 cut(s) | 349 |
| Hpy188I | TCNGA | 1 cut(s) | 277 |
| Hpy188III | TCNNGA | 2 cut(s) | 62, 221 |
| Hpy8I | GTNNAC | 1 cut(s) | 349 |
| HpyAV | CCTTC | 1 cut(s) | 45 |
| HpyCH4IV | ACGT | 1 cut(s) | 88 |
| HpyCH4V | TGCA | 3 cut(s) | 110, 287, 320 |
| HpySE526I | ACGT | 1 cut(s) | 88 |
| Hsp92II | CATG | 1 cut(s) | 65 |
| Kzo9I | GATC | 4 cut(s) | 91, 217, 223, 296 |
| LpnPI | CCDG | 2 cut(s) | 108, 120 |
| LweI | GCATC | 2 cut(s) | 214, 296 |
| MaeII | ACGT | 1 cut(s) | 88 |
| MalI | GATC | 4 cut(s) | 93, 219, 225, 298 |
| MboI | GATC | 4 cut(s) | 91, 217, 223, 296 |
| MboII | GAAGA | 3 cut(s) | 41, 162, 203 |
| MfeI | CAATTG | 1 cut(s) | 321 |
| MluCI | AATT | 5 cut(s) | 66, 185, 321, 359, 372 |
| MlyI | GAGTC | 1 cut(s) | 65 |
| MmeI | TCCRAC | 1 cut(s) | 224 |
| Mph1103I | ATGCAT | 1 cut(s) | 289 |
| MseI | TTAA | 3 cut(s) | 75, 129, 234 |
| MslI | CAYNNNNRTG | 1 cut(s) | 210 |
| MspI | CCGG | 1 cut(s) | 95 |
| MspR9I | CCNGG | 1 cut(s) | 96 |
| MunI | CAATTG | 1 cut(s) | 321 |
| Mva1269I | GAATGC | 1 cut(s) | 289 |
| NciI | CCSGG | 1 cut(s) | 96 |
| NdeII | GATC | 4 cut(s) | 91, 217, 223, 296 |
| NlaIII | CATG | 1 cut(s) | 65 |
| NsiI | ATGCAT | 1 cut(s) | 289 |
| NspV | TTCGAA | 1 cut(s) | 148 |
| PagI | TCATGA | 1 cut(s) | 61 |
| PctI | GAATGC | 1 cut(s) | 289 |
| PfoI | TCCNGGA | 1 cut(s) | 94 |
| PleI | GAGTC | 1 cut(s) | 64 |
| PpsI | GAGTC | 1 cut(s) | 64 |
| PshBI | ATTAAT | 1 cut(s) | 129 |
| PspPI | GGNCC | 1 cut(s) | 170 |
| RsaI | GTAC | 2 cut(s) | 48, 272 |
| RsaNI | GTAC | 2 cut(s) | 47, 271 |
| RseI | CAYNNNNRTG | 1 cut(s) | 210 |
| SaqAI | TTAA | 3 cut(s) | 75, 129, 234 |
| Sau3AI | GATC | 4 cut(s) | 91, 217, 223, 296 |
| Sau96I | GGNCC | 1 cut(s) | 170 |
| ScaI | AGTACT | 1 cut(s) | 272 |
| SchI | GAGTC | 1 cut(s) | 65 |
| ScrFI | CCNGG | 1 cut(s) | 96 |
| SetI | ASST | 3 cut(s) | 37, 91, 395 |
| SfaNI | GCATC | 2 cut(s) | 214, 296 |
| SfuI | TTCGAA | 1 cut(s) | 148 |
| SinI | GGWCC | 1 cut(s) | 170 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 210 |
| SmlI | CTYRAG | 1 cut(s) | 266 |
| SmoI | CTYRAG | 1 cut(s) | 266 |
| Sse9I | AATT | 5 cut(s) | 66, 185, 321, 359, 372 |
| StyD4I | CCNGG | 1 cut(s) | 94 |
| StyI | CCWWGG | 1 cut(s) | 260 |
| TaiI | ACGT | 1 cut(s) | 91 |
| TaqI | TCGA | 1 cut(s) | 148 |
| TasI | AATT | 5 cut(s) | 66, 185, 321, 359, 372 |
| TatI | WGTACW | 1 cut(s) | 270 |
| Tru1I | TTAA | 3 cut(s) | 75, 129, 234 |
| Tru9I | TTAA | 3 cut(s) | 75, 129, 234 |
| TspDTI | ATGAA | 2 cut(s) | 78, 156 |
| VpaK11BI | GGWCC | 1 cut(s) | 170 |
| VspI | ATTAAT | 1 cut(s) | 129 |
| XapI | RAATTY | 1 cut(s) | 359 |
| ZrmI | AGTACT | 1 cut(s) | 272 |
| Zsp2I | ATGCAT | 1 cut(s) | 289 |