Prokaryotic RING finger family 4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47160 AT3G47160 AT3G47160 AT5G58787 AT5G58787 |
| fragaria_vesca | FvH4_3g38470 |
| malus_domestica | MD03G1071600.v1.1 MD11G1075300.v1.1 |
| prunus_persica | Prupe.6G058200_v2.0.a1 Prupe.6G058200_v2.0.a1 Prupe.6G058200_v2.0.a1 Prupe.6G058200_v2.0.a1 |
| pyrus_communis | pycom03g05790 pycom11g06260 |
| rosa_chinensis | RchiOBHm_Chr5g0069171 |
| rosa_laevigata | RLG00000036042 |
| rosa_multiflora | Rmu_sc0000936.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00011630 |
| rosa_rugosa | Rorug05G0396600 Rorug05G0396700 |
| rosa_samantha | Rh5BG472400 Rh5CG494700 Rh5DG484900 |
| rosa_wichuraiana | Rw0G006020 Rw5G042340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 138 |
| AcuI | CTGAAG | 1 cut(s) | 78 |
| AgsI | TTSAA | 1 cut(s) | 14 |
| AluBI | AGCT | 1 cut(s) | 92 |
| AluI | AGCT | 1 cut(s) | 92 |
| BfaI | CTAG | 1 cut(s) | 105 |
| BmsI | GCATC | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 1 cut(s) | 45 |
| Cac8I | GCNNGC | 1 cut(s) | 45 |
| CviJI | RGCY | 3 cut(s) | 43, 92, 116 |
| CviKI_1 | RGCY | 3 cut(s) | 43, 92, 116 |
| Eco32I | GATATC | 1 cut(s) | 130 |
| Eco57I | CTGAAG | 1 cut(s) | 78 |
| EcoRV | GATATC | 1 cut(s) | 130 |
| FaiI | YATR | 2 cut(s) | 49, 51 |
| FspBI | CTAG | 1 cut(s) | 105 |
| HinfI | GANTC | 2 cut(s) | 4, 101 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 1 cut(s) | 105 |
| HpyCH4IV | ACGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 1 cut(s) | 47 |
| HpySE526I | ACGT | 1 cut(s) | 138 |
| LpnPI | CCDG | 1 cut(s) | 57 |
| LweI | GCATC | 1 cut(s) | 67 |
| MaeI | CTAG | 1 cut(s) | 105 |
| MaeII | ACGT | 1 cut(s) | 138 |
| MlyI | GAGTC | 1 cut(s) | 110 |
| MnlI | CCTC | 2 cut(s) | 62, 140 |
| MslI | CAYNNNNRTG | 1 cut(s) | 52 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PleI | GAGTC | 1 cut(s) | 109 |
| PpsI | GAGTC | 1 cut(s) | 109 |
| Psp1406I | AACGTT | 1 cut(s) | 138 |
| RseI | CAYNNNNRTG | 1 cut(s) | 52 |
| SchI | GAGTC | 1 cut(s) | 110 |
| SetI | ASST | 2 cut(s) | 94, 141 |
| SfaNI | GCATC | 1 cut(s) | 67 |
| SgeI | CNNG | 6 cut(s) | 35, 48, 56, 96, 112, 117 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 52 |
| SspMI | CTAG | 1 cut(s) | 105 |
| TaiI | ACGT | 1 cut(s) | 141 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XbaI | TCTAGA | 1 cut(s) | 104 |
| XspI | CTAG | 1 cut(s) | 105 |