Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008012

Physical Location & Seq

Genomic Coordinates Forward (+)

57476911 .. 57481642

Gene Structure 4732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0415100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGGTTATGGAAACTCAAGATCTGTAAGATTTCAAGATGATGTTGAATTAGCAAAGCTACCTTCAGTCAATGGAGTTGGTGATGTTAAGTTCAAGTACAAGATTGATGGGACTCAAGTAATTGATAAGGAGCTGCCTGGAAAGTCTGGGAAATCTTTAAAAGCTAAAGTACTGTCCAGAGTCTTTTCTGAGGACTATGAGAGTGAGAAGAAGAAGATATTACTCATATTAGATCCTCGAGGACCAACAATTCGCCGATGGAACAAGATTTTCCTAGTAACCTGTTTGATTTCTTTGTTCGTAGACCCTTTATTCTTTTACTTGCCAGAGGTCGGAGACCAAGTCTGTATTGATATTGGAATACCACTTGAAGTTGCTCTTACCATTCTTCGATCAGTGGCCGATGTTTTTTACTTAATTCAGATTTATATTAGATTTCATAAAGCTTATATTGCACCTTCCTCTCGAGTATTTGGGAGAGGAGAGCTTGTTATAGACTCTTCAAAGATCGCATTTAAGTACCTCCGGTTTGGTTTCTGGATTGACCTCATTGCTGCCCTGCCCCTTCCTCAGGTACTAATTTGGATTGTAATCCCCAACCTTAATGGTTCAACAATGACAAACACCAAAAACGTACTTCGGTTCATCATAATCTTTCAGTACATACCAAGGCTCTTTCTTATATTTCCGCTATCGTCACAAATTGTTAAGGCCACTGGTATTGTGACAGAGACAGCATGGGCAGGGGCTGCATATAACCTGATGTTATACATGTTGGCAAGTCATGTTTTAGGGGCTTGTTGGTACCTTCTTTCAATTGAGCGGCAAGAAGCATGCTGGAGACAAGTTTGTGAGGAAGACAATAAAAATTGTGATTATGGTTATTTAGATTGCAAAATGGTGCAAGACCGCCAAAGGATCTCCTGGTTCCAGTCAAGTAATGTCACACACCGATGTGATCCAGAAGAAAACTCTTATGAATTTGGTATATACGGTGATGCGGTAACATATGGTGTTACGACCTCATCATTCTTCAACAAGTACTTTTACTGTCTTTGGTGGGGTCTAAGAAACCTCAGTTCCTTGGGGCAGAATCTTTCGACCAGCACTTATGTCGGAGAAATAATCTTTGCCATTATTATTGCGACTCTTGGACTAGTTCTCTTTGCTTTGCTGATCGGTAATATGCAAACCTACCTTCAATCTACAACTGTCCGACTAGAAGAGTGGAGGATCAAGAGAACTGATACAGAGCAATGGATGCGTCACAGGCAGCTGCCTCCAGAATTAAGACTGTCTGTAAGGAAGTATGATCAGTATAAGTGGCTGGCTACTCGAGGAGTCGATGAAGAAAGTCTTCTTAAAGGCCTACCTTTGGATCTTCGAAGAGACATCAAACGCCACCTTTGCCTTGACCTTGTTCGTCGGGTCCCTATGTTTGATCAAATGGACGAAAGAATGCTAGATGCAATATGTGACAGGCTTAAACCTGCTTTGGGTACTGAAGGCACATTTCTAGTGCGCGAAGGTGATCCTGTCAATGAAATGCTCTTCATAGTTCGAGGCCACCTTGATTCTTACACCACCAATGGTGGCCGGACAGGATTTTTCAACTCATGCCATCTTGGCCCTGGTGACTTCTGTGGAGAAGAACTATTGACGTGGGCCTTAGACCCTCGTCCGAGTGTCATTCTCCCATCTTCAACGCGCACAGTCAAAGCGCTTTCTGAAGTAGAAGCATTTGCTCTAGTAGCAGAGGACTTGAAATTTGTTGCATCACAGTTTAGGAGACTTCATAGCAAGCAACTTAGGCACAAGTTCCGGTTCTATTCACACCAGTGGCGGTTATGGTCTGCATGTTTCATACAGGCTGCTTGGCGTCGGTATAAGAAGCGCAGGGAAGCAGCAGAGCTCAAGGCTAAAGAAAACCAAACGGCCGCAGCACCTGCGCAACCCCCACCCATCTCAGGCTTGGCTACTTATGCAGCAGCGCTTGCTGCAAGTACTAGGAGGGGTGCCAAGAAGCATCCTGGGCCAGACTCTGGGGTTGTAAGTTCACTACAGAAGCCAGCAGAGCCTGATTTCTCTGTTGATGATGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009987 GO:0010033 GO:0010051 GO:0010228 GO:0010265 GO:0016020 GO:0016043 GO:0016567 GO:0019538 GO:0022414 GO:0022607 GO:0030312 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0065003 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP120

Protein Analysis

701

Amino Acids

80.05

Weight (kDa)

8.9

Isoelectric Point (pI)

45.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	86 - 406	6.6e-20	Ion transport protein
cNMP_binding	PF00027	502 - 589	6.4e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008012)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06960 AT1G06960 AT1G06960 AT1G06960 AT1G06960 AT2G30260
fragaria_vesca	FvH4_3g39900
malus_domestica	MD03G1057700.v1.1 MD11G1060000.v1.1
prunus_persica	Prupe.6G046700_v2.0.a1 Prupe.6G046700_v2.0.a1
pyrus_communis	pycom03g04610 pycom11g04960
rosa_chinensis	RchiOBHm_Chr5g0071861
rosa_laevigata	RLG00000036256
rosa_multiflora	Rmu_sc0025243.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009300
rosa_rugosa	Rorug05G0415100 Rorug05G0415100
rosa_samantha	Rh5AG471300 Rh5BG491000 Rh5CG514900 Rh5DG502700
rosa_wichuraiana	Rw5G043790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1954
AbsI	CCTCGAGG	1 cut(s)	237
Acc16I	TGCGCA	1 cut(s)	1950
Acc36I	ACCTGC	2 cut(s)	1498, 1954
Acc65I	GGTACC	1 cut(s)	804
AccB1I	GGYRCC	2 cut(s)	804, 2015
AccB7I	CCANNNNNTGG	1 cut(s)	2042
AccBSI	CCGCTC	1 cut(s)	823
AccI	GTMKAC	1 cut(s)	303
AccII	CGCG	2 cut(s)	1524, 1708
AciI	CCGC	6 cut(s)	689, 823, 910, 1001, 1843, 1938
AclWI	GGATC	6 cut(s)	227, 926, 953, 1241, 1386, 1526
AcoI	YGGCCR	3 cut(s)	399, 1594, 1935
AcsI	RAATTY	2 cut(s)	980, 1766
AcuI	CTGAAG	3 cut(s)	48, 1524, 1749
AcyI	GRCGYC	1 cut(s)	1879
AfeI	AGCGCT	2 cut(s)	1722, 1992
AfiI	CCNNNNNNNGG	6 cut(s)	332, 571, 1375, 1496, 1967, 2042
AflIII	ACRYGT	1 cut(s)	771
AhlI	ACTAGT	1 cut(s)	1156
AjiI	CACGTC	1 cut(s)	1662
AjnI	CCWGG	4 cut(s)	136, 923, 1630, 2029
AleI	CACNNNNGTG	2 cut(s)	954, 1837
AluBI	AGCT	7 cut(s)	58, 133, 164, 446, 487, 1276, 1912
AluI	AGCT	7 cut(s)	58, 133, 164, 446, 487, 1276, 1912
Alw21I	GWGCWC	1 cut(s)	1914
Alw26I	GTCTC	5 cut(s)	330, 725, 835, 1383, 1783
AlwI	GGATC	6 cut(s)	227, 926, 953, 1241, 1386, 1526
AlwNI	CAGNNNCTG	4 cut(s)	749, 1946, 2042, 2078
Ama87I	CYCGRG	3 cut(s)	237, 465, 1335
Aor51HI	AGCGCT	2 cut(s)	1722, 1992
AoxI	GGCC	9 cut(s)	399, 711, 1366, 1564, 1594, 1627, 1665, 1935, 2033
ApoI	RAATTY	2 cut(s)	980, 1766
ArsI	GACNNNNNNTTYG	4 cut(s)	234, 266, 1751, 1783
Asp700I	GAANNNNTTC	1 cut(s)	1356
Asp718I	GGTACC	1 cut(s)	804
AspLEI	GCGC	6 cut(s)	1524, 1710, 1723, 1896, 1951, 1993
AspS9I	GGNCC	5 cut(s)	242, 1429, 1628, 1665, 2033
AsuHPI	GGTGA	4 cut(s)	92, 1007, 1541, 1646
AsuII	TTCGAA	1 cut(s)	1384
AvaI	CYCGRG	3 cut(s)	237, 465, 1335
AvaII	GGWCC	2 cut(s)	242, 1429
AxyI	CCTNAGG	1 cut(s)	570
BanI	GGYRCC	2 cut(s)	804, 2015
BanII	GRGCYC	1 cut(s)	1914
BbsI	GAAGAC	2 cut(s)	864, 1349
Bbv12I	GWGCWC	1 cut(s)	1914
BccI	CCATC	5 cut(s)	101, 252, 1629, 1705, 1970
BceAI	ACGGC	1 cut(s)	1950
BcgI	CGANNNNNNTGC	2 cut(s)	1096, 1130
BciT130I	CCWGG	4 cut(s)	138, 925, 1632, 2031
BclI	TGATCA	2 cut(s)	1312, 1441
BcoDI	GTCTC	5 cut(s)	330, 725, 835, 1383, 1783
BcuI	ACTAGT	1 cut(s)	1156
BfaI	CTAG	7 cut(s)	275, 1157, 1220, 1463, 1517, 1748, 2007
BfmI	CTRYAG	1 cut(s)	2060
BfoI	RGCGCY	2 cut(s)	1724, 1994
BfuAI	ACCTGC	2 cut(s)	1498, 1954
BglI	GCCNNNNNGGC	1 cut(s)	1626
BglII	AGATCT	1 cut(s)	20
BmcAI	AGTACT	3 cut(s)	171, 1043, 2005
Bme1390I	CCNGG	4 cut(s)	138, 925, 1632, 2031
Bme18I	GGWCC	2 cut(s)	242, 1429
BmeT110I	CYCGRG	3 cut(s)	237, 465, 1335
BmgBI	CACGTC	1 cut(s)	1662
BmgT120I	GGNCC	5 cut(s)	242, 1429, 1628, 1665, 2033
BmiI	GGNNCC	5 cut(s)	806, 929, 1430, 1431, 2017
BmrFI	CCNGG	4 cut(s)	138, 925, 1632, 2031
BmsI	GCATC	5 cut(s)	988, 1251, 1456, 1784, 2035
BoxI	GACNNNNGTC	1 cut(s)	1677
BpiI	GAAGAC	2 cut(s)	864, 1349
BpmI	CTGGAG	2 cut(s)	859, 1266
Bpu14I	TTCGAA	1 cut(s)	1384
BpuEI	CTTGAG	2 cut(s)	99, 1898
BsaBI	GATNNNNATC	1 cut(s)	590
BsaHI	GRCGYC	1 cut(s)	1879
BsaI	GGTCTC	1 cut(s)	330
BsaJI	CCNNGG	4 cut(s)	668, 1083, 1630, 2030
BsaWI	WCCGGW	2 cut(s)	525, 1821
BsaXI	ACNNNNNCTCC	4 cut(s)	327, 357, 474, 504
Bsc4I	CCNNNNNNNGG	6 cut(s)	332, 571, 1375, 1496, 1967, 2042
Bse1I	ACTGG	3 cut(s)	721, 931, 1837
Bse21I	CCTNAGG	1 cut(s)	570
Bse3DI	GCAATG	2 cut(s)	549, 1262
Bse8I	GATNNNNATC	1 cut(s)	590
BseBI	CCWGG	4 cut(s)	138, 925, 1632, 2031
BseDI	CCNNGG	4 cut(s)	668, 1083, 1630, 2030
BseGI	GGATG	2 cut(s)	1266, 2026
BseJI	GATNNNNATC	1 cut(s)	590
BseLI	CCNNNNNNNGG	6 cut(s)	332, 571, 1375, 1496, 1967, 2042
BseMI	GCAATG	2 cut(s)	549, 1262
BseMII	CTCAG	4 cut(s)	180, 584, 1090, 1980
BseNI	ACTGG	3 cut(s)	721, 931, 1837
BseRI	GAGGAG	2 cut(s)	495, 1353
BseX3I	CGGCCG	1 cut(s)	1935
Bsh1236I	CGCG	2 cut(s)	1524, 1708
Bsh1285I	CGRYCG	1 cut(s)	1938
BshFI	GGCC	9 cut(s)	401, 713, 1368, 1566, 1596, 1629, 1667, 1937, 2035
BshNI	GGYRCC	2 cut(s)	804, 2015
BsiEI	CGRYCG	1 cut(s)	1938
BsiHKAI	GWGCWC	1 cut(s)	1914
BsiHKCI	CYCGRG	3 cut(s)	237, 465, 1335
BsiSI	CCGG	3 cut(s)	526, 1597, 1822
BslFI	GGGAC	2 cut(s)	124, 1415
BslI	CCNNNNNNNGG	6 cut(s)	332, 571, 1375, 1496, 1967, 2042
BsmAI	GTCTC	5 cut(s)	330, 725, 835, 1383, 1783
BsmFI	GGGAC	2 cut(s)	124, 1415
BsmI	GAATGC	1 cut(s)	1464
BsnI	GGCC	9 cut(s)	401, 713, 1368, 1566, 1596, 1629, 1667, 1937, 2035
Bso31I	GGTCTC	1 cut(s)	330
BsoBI	CYCGRG	3 cut(s)	237, 465, 1335
Bsp119I	TTCGAA	1 cut(s)	1384
Bsp1286I	GDGCHC	1 cut(s)	1914
BspACI	CCGC	6 cut(s)	689, 823, 910, 1001, 1843, 1938
BspANI	GGCC	9 cut(s)	401, 713, 1368, 1566, 1596, 1629, 1667, 1937, 2035
BspCNI	CTCAG	4 cut(s)	181, 583, 1089, 1979
BspFNI	CGCG	2 cut(s)	1524, 1708
BspLI	GGNNCC	5 cut(s)	806, 929, 1430, 1431, 2017
BspMI	ACCTGC	2 cut(s)	1498, 1954
BspPI	GGATC	6 cut(s)	227, 926, 953, 1241, 1386, 1526
BspQI	GCTCTTC	1 cut(s)	1556
BspT104I	TTCGAA	1 cut(s)	1384
BspT107I	GGYRCC	2 cut(s)	804, 2015
BspTNI	GGTCTC	1 cut(s)	330
BsrBI	CCGCTC	1 cut(s)	823
BsrDI	GCAATG	2 cut(s)	549, 1262
BsrI	ACTGG	3 cut(s)	721, 931, 1837
BssECI	CCNNGG	4 cut(s)	668, 1083, 1630, 2030
BssNI	GRCGYC	1 cut(s)	1879
BssT1I	CCWWGG	2 cut(s)	668, 1083
Bst2UI	CCWGG	4 cut(s)	138, 925, 1632, 2031
Bst4CI	ACNGT	7 cut(s)	174, 995, 1052, 1213, 1296, 1714, 1782
Bst6I	CTCTTC	4 cut(s)	505, 1218, 1381, 1556
BstACI	GRCGYC	1 cut(s)	1879
BstAPI	GCANNNNNTGC	4 cut(s)	749, 1261, 1946, 1994
BstBI	TTCGAA	1 cut(s)	1384
BstC8I	GCNNGC	5 cut(s)	835, 1329, 1802, 1995, 2070
BstDEI	CTNAG	7 cut(s)	189, 570, 1067, 1076, 1669, 1808, 1966
BstENI	CCTNNNNNAGG	1 cut(s)	569
BstF5I	GGATG	2 cut(s)	1266, 2026
BstFNI	CGCG	2 cut(s)	1524, 1708
BstH2I	RGCGCY	2 cut(s)	1724, 1994
BstHHI	GCGC	6 cut(s)	1524, 1710, 1723, 1896, 1951, 1993
BstMAI	GTCTC	5 cut(s)	330, 725, 835, 1383, 1783
BstMCI	CGRYCG	1 cut(s)	1938
BstNI	CCWGG	4 cut(s)	138, 925, 1632, 2031
BstNSI	RCATGY	3 cut(s)	775, 837, 1860
BstPAI	GACNNNNGTC	1 cut(s)	1677
BstSCI	CCNGG	4 cut(s)	136, 923, 1630, 2029
BstSFI	CTRYAG	1 cut(s)	2060
BstUI	CGCG	2 cut(s)	1524, 1708
BstV2I	GAAGAC	2 cut(s)	864, 1349
BstX2I	RGATCY	4 cut(s)	20, 232, 918, 1378
BstYI	RGATCY	4 cut(s)	20, 232, 918, 1378
BstZI	CGGCCG	1 cut(s)	1935
Bsu36I	CCTNAGG	1 cut(s)	570
BsuRI	GGCC	9 cut(s)	401, 713, 1368, 1566, 1596, 1629, 1667, 1937, 2035
BtrI	CACGTC	1 cut(s)	1662
BtsCI	GGATG	2 cut(s)	1266, 2026
BtsIMutI	CAGTG	3 cut(s)	402, 714, 1844
BveI	ACCTGC	2 cut(s)	1498, 1954
Cac8I	GCNNGC	5 cut(s)	835, 1329, 1802, 1995, 2070
CaiI	CAGNNNCTG	4 cut(s)	749, 1946, 2042, 2078
CfoI	GCGC	6 cut(s)	1524, 1710, 1723, 1896, 1951, 1993
Cfr13I	GGNCC	5 cut(s)	242, 1429, 1628, 1665, 2033
CseI	GACGC	2 cut(s)	1253, 1868
CspCI	CAANNNNNGTGG	2 cut(s)	703, 738
CviAII	CATG	6 cut(s)	738, 772, 785, 834, 1617, 1857
DdeI	CTNAG	7 cut(s)	189, 570, 1067, 1076, 1669, 1808, 1966
DraI	TTTAAA	1 cut(s)	159
EaeI	YGGCCR	3 cut(s)	399, 1594, 1935
EagI	CGGCCG	1 cut(s)	1935
Eam1104I	CTCTTC	4 cut(s)	505, 1218, 1381, 1556
EarI	CTCTTC	4 cut(s)	505, 1218, 1381, 1556
Ecl136II	GAGCTC	1 cut(s)	1912
EclXI	CGGCCG	1 cut(s)	1935
Eco130I	CCWWGG	2 cut(s)	668, 1083
Eco147I	AGGCCT	1 cut(s)	1368
Eco24I	GRGCYC	1 cut(s)	1914
Eco31I	GGTCTC	1 cut(s)	330
Eco47I	GGWCC	2 cut(s)	242, 1429
Eco47III	AGCGCT	2 cut(s)	1722, 1992
Eco52I	CGGCCG	1 cut(s)	1935
Eco53kI	GAGCTC	1 cut(s)	1912
Eco57I	CTGAAG	3 cut(s)	48, 1524, 1749
Eco81I	CCTNAGG	1 cut(s)	570
Eco88I	CYCGRG	3 cut(s)	237, 465, 1335
EcoICRI	GAGCTC	1 cut(s)	1912
EcoNI	CCTNNNNNAGG	1 cut(s)	569
EcoO109I	RGGNCCY	1 cut(s)	1429
EcoRII	CCWGG	4 cut(s)	136, 923, 1630, 2029
EcoT14I	CCWWGG	2 cut(s)	668, 1083
EcoT38I	GRGCYC	1 cut(s)	1914
ErhI	CCWWGG	2 cut(s)	668, 1083
FaeI	CATG	6 cut(s)	741, 775, 788, 837, 1620, 1860
FalI	AAGNNNNNCTT	4 cut(s)	363, 395, 1341, 1373
FaqI	GGGAC	2 cut(s)	124, 1415
FatI	CATG	6 cut(s)	737, 771, 784, 833, 1616, 1856
FauNDI	CATATG	1 cut(s)	1009
FbaI	TGATCA	2 cut(s)	1312, 1441
FblI	GTMKAC	1 cut(s)	303
FokI	GGATG	2 cut(s)	1273, 2013
FriOI	GRGCYC	1 cut(s)	1914
FspBI	CTAG	7 cut(s)	275, 1157, 1220, 1463, 1517, 1748, 2007
FspI	TGCGCA	1 cut(s)	1950
GlaI	GCGC	6 cut(s)	1523, 1709, 1722, 1895, 1950, 1992
GsuI	CTGGAG	2 cut(s)	859, 1266
HaeII	RGCGCY	2 cut(s)	1724, 1994
HaeIII	GGCC	9 cut(s)	401, 713, 1368, 1566, 1596, 1629, 1667, 1937, 2035
HapII	CCGG	3 cut(s)	526, 1597, 1822
HgaI	GACGC	2 cut(s)	1253, 1868
HhaI	GCGC	6 cut(s)	1524, 1710, 1723, 1896, 1951, 1993
Hin1I	GRCGYC	1 cut(s)	1879
Hin1II	CATG	6 cut(s)	741, 775, 788, 837, 1620, 1860
Hin6I	GCGC	6 cut(s)	1522, 1708, 1721, 1894, 1949, 1991
HinP1I	GCGC	6 cut(s)	1522, 1708, 1721, 1894, 1949, 1991
HindIII	AAGCTT	1 cut(s)	444
HinfI	GANTC	8 cut(s)	112, 180, 497, 1093, 1147, 1341, 1574, 2039
HpaII	CCGG	3 cut(s)	526, 1597, 1822
HphI	GGTGA	4 cut(s)	92, 1007, 1541, 1646
Hpy166II	GTNNAC	2 cut(s)	304, 2057
Hpy188I	TCNGA	7 cut(s)	190, 335, 423, 1118, 1217, 1683, 1729
Hpy188III	TCNNGA	8 cut(s)	18, 35, 177, 465, 538, 962, 1237, 1283
Hpy8I	GTNNAC	2 cut(s)	304, 2057
Hpy99I	CGWCG	2 cut(s)	1428, 1884
HpyAV	CCTTC	7 cut(s)	72, 468, 575, 818, 1208, 1499, 1520
HpyCH4III	ACNGT	7 cut(s)	174, 995, 1052, 1213, 1296, 1714, 1782
HpyCH4IV	ACGT	2 cut(s)	633, 1661
HpyF3I	CTNAG	7 cut(s)	189, 570, 1067, 1076, 1669, 1808, 1966
HpySE526I	ACGT	2 cut(s)	633, 1661
Hsp92I	GRCGYC	1 cut(s)	1879
Hsp92II	CATG	6 cut(s)	741, 775, 788, 837, 1620, 1860
HspAI	GCGC	6 cut(s)	1522, 1708, 1721, 1894, 1949, 1991
KflI	GGGWCCC	1 cut(s)	1429
KpnI	GGTACC	1 cut(s)	808
Ksp22I	TGATCA	2 cut(s)	1312, 1441
LguI	GCTCTTC	1 cut(s)	1556
LmnI	GCTCC	1 cut(s)	130
LweI	GCATC	5 cut(s)	988, 1251, 1456, 1784, 2035
MaeI	CTAG	7 cut(s)	275, 1157, 1220, 1463, 1517, 1748, 2007
MaeII	ACGT	2 cut(s)	633, 1661
MaeIII	GTNAC	9 cut(s)	277, 696, 724, 943, 1003, 1015, 1265, 1475, 1634
MbiI	CCGCTC	1 cut(s)	823
MfeI	CAATTG	1 cut(s)	816
MflI	RGATCY	4 cut(s)	20, 232, 918, 1378
MhlI	GDGCHC	1 cut(s)	1914
MlyI	GAGTC	6 cut(s)	106, 189, 491, 1141, 1350, 2033
MmeI	TCCRAC	3 cut(s)	313, 1096, 1240
MroXI	GAANNNNTTC	1 cut(s)	1356
MseI	TTAA	9 cut(s)	87, 158, 416, 516, 603, 708, 1289, 1362, 1485
MslI	CAYNNNNRTG	3 cut(s)	952, 954, 1837
MspA1I	CMGCKG	1 cut(s)	1276
MspI	CCGG	3 cut(s)	526, 1597, 1822
MspR9I	CCNGG	4 cut(s)	138, 925, 1632, 2031
MunI	CAATTG	1 cut(s)	816
Mva1269I	GAATGC	1 cut(s)	1464
MvaI	CCWGG	4 cut(s)	138, 925, 1632, 2031
MvnI	CGCG	2 cut(s)	1524, 1708
NdeI	CATATG	1 cut(s)	1009
NlaIII	CATG	6 cut(s)	741, 775, 788, 837, 1620, 1860
NlaIV	GGNNCC	5 cut(s)	806, 929, 1430, 1431, 2017
NmuCI	GTSAC	6 cut(s)	696, 724, 943, 1265, 1475, 1634
NsbI	TGCGCA	1 cut(s)	1950
NspI	RCATGY	3 cut(s)	775, 837, 1860
NspV	TTCGAA	1 cut(s)	1384
OliI	CACNNNNGTG	2 cut(s)	954, 1837
PaeI	GCATGC	1 cut(s)	837
PaeR7I	CTCGAG	3 cut(s)	237, 465, 1335
PaqCI	CACCTGC	1 cut(s)	1954
PceI	AGGCCT	1 cut(s)	1368
PciI	ACATGT	1 cut(s)	771
PciSI	GCTCTTC	1 cut(s)	1556
PctI	GAATGC	1 cut(s)	1464
PdmI	GAANNNNTTC	1 cut(s)	1356
PfeI	GAWTC	2 cut(s)	1093, 1574
PflFI	GACNNNGTC	1 cut(s)	341
PflMI	CCANNNNNTGG	1 cut(s)	2042
PleI	GAGTC	6 cut(s)	106, 188, 491, 1141, 1349, 2033
PpsI	GAGTC	6 cut(s)	106, 188, 491, 1141, 1349, 2033
PpuMI	RGGWCCY	1 cut(s)	1429
PscI	ACATGT	1 cut(s)	771
PshAI	GACNNNNGTC	1 cut(s)	1677
Psp124BI	GAGCTC	1 cut(s)	1914
Psp5II	RGGWCCY	1 cut(s)	1429
Psp6I	CCWGG	4 cut(s)	136, 923, 1630, 2029
PspGI	CCWGG	4 cut(s)	136, 923, 1630, 2029
PspN4I	GGNNCC	5 cut(s)	806, 929, 1430, 1431, 2017
PspPI	GGNCC	5 cut(s)	242, 1429, 1628, 1665, 2033
PspPPI	RGGWCCY	1 cut(s)	1429
PspXI	VCTCGAGB	2 cut(s)	237, 1335
PstNI	CAGNNNCTG	4 cut(s)	749, 1946, 2042, 2078
PsuI	RGATCY	4 cut(s)	20, 232, 918, 1378
PsyI	GACNNNGTC	1 cut(s)	341
PvuII	CAGCTG	1 cut(s)	1276
RseI	CAYNNNNRTG	3 cut(s)	952, 954, 1837
SacI	GAGCTC	1 cut(s)	1914
SapI	GCTCTTC	1 cut(s)	1556
SaqAI	TTAA	9 cut(s)	87, 158, 416, 516, 603, 708, 1289, 1362, 1485
Sau96I	GGNCC	5 cut(s)	242, 1429, 1628, 1665, 2033
ScaI	AGTACT	3 cut(s)	171, 1043, 2005
SchI	GAGTC	6 cut(s)	106, 189, 491, 1141, 1350, 2033
ScrFI	CCNGG	4 cut(s)	138, 925, 1632, 2031
SduI	GDGCHC	1 cut(s)	1914
SfaNI	GCATC	5 cut(s)	988, 1251, 1456, 1784, 2035
SfcI	CTRYAG	1 cut(s)	2060
Sfr274I	CTCGAG	3 cut(s)	237, 465, 1335
SfuI	TTCGAA	1 cut(s)	1384
SinI	GGWCC	2 cut(s)	242, 1429
SlaI	CTCGAG	3 cut(s)	237, 465, 1335
SmiMI	CAYNNNNRTG	3 cut(s)	952, 954, 1837
SmlI	CTYRAG	6 cut(s)	16, 114, 237, 465, 1335, 1913
SmoI	CTYRAG	6 cut(s)	16, 114, 237, 465, 1335, 1913
SpeI	ACTAGT	1 cut(s)	1156
SphI	GCATGC	1 cut(s)	837
SseBI	AGGCCT	1 cut(s)	1368
SsiI	CCGC	6 cut(s)	689, 823, 910, 1001, 1843, 1938
SspMI	CTAG	7 cut(s)	275, 1157, 1220, 1463, 1517, 1748, 2007
SstI	GAGCTC	1 cut(s)	1914
StuI	AGGCCT	1 cut(s)	1368
StyD4I	CCNGG	4 cut(s)	136, 923, 1630, 2029
StyI	CCWWGG	2 cut(s)	668, 1083
TaaI	ACNGT	7 cut(s)	174, 995, 1052, 1213, 1296, 1714, 1782
TaiI	ACGT	2 cut(s)	636, 1664
TaqI	TCGA	8 cut(s)	238, 391, 466, 1100, 1336, 1344, 1384, 1561
TatI	WGTACW	5 cut(s)	96, 169, 660, 1041, 2003
TauI	GCSGC	2 cut(s)	826, 1940
TfiI	GAWTC	2 cut(s)	1093, 1574
Tru1I	TTAA	9 cut(s)	87, 158, 416, 516, 603, 708, 1289, 1362, 1485
Tru9I	TTAA	9 cut(s)	87, 158, 416, 516, 603, 708, 1289, 1362, 1485
TscAI	CASTG	3 cut(s)	402, 721, 1844
TseFI	GTSAC	6 cut(s)	696, 724, 943, 1265, 1475, 1634
Tsp45I	GTSAC	6 cut(s)	696, 724, 943, 1265, 1475, 1634
TspDTI	ATGAA	8 cut(s)	428, 634, 993, 1362, 1543, 1557, 1784, 1852
TspRI	CASTG	3 cut(s)	402, 721, 1844
Tth111I	GACNNNGTC	1 cut(s)	341
Van91I	CCANNNNNTGG	1 cut(s)	2042
VpaK11BI	GGWCC	2 cut(s)	242, 1429
XagI	CCTNNNNNAGG	1 cut(s)	569
XapI	RAATTY	2 cut(s)	980, 1766
XceI	RCATGY	3 cut(s)	775, 837, 1860
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1628, 1969
XhoI	CTCGAG	3 cut(s)	237, 465, 1335
XmiI	GTMKAC	1 cut(s)	303
XmnI	GAANNNNTTC	1 cut(s)	1356
XspI	CTAG	7 cut(s)	275, 1157, 1220, 1463, 1517, 1748, 2007
ZrmI	AGTACT	3 cut(s)	171, 1043, 2005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.