Belongs to the peptidase C1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0010411 |
| rosa_laevigata | RLG00000036650 RLG00000036654 |
| rosa_multiflora | Rmu_sc0003323.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00126230 |
| rosa_rugosa | Rorug05G0450700 |
| rosa_samantha | Rh2CG286000 |
| rosa_wichuraiana | Rw5G047110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 30 |
| AcsI | RAATTY | 1 cut(s) | 64 |
| AcuI | CTGAAG | 1 cut(s) | 197 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 30, 47 |
| AgsI | TTSAA | 2 cut(s) | 58, 153 |
| AluBI | AGCT | 3 cut(s) | 61, 101, 234 |
| AluI | AGCT | 3 cut(s) | 61, 101, 234 |
| Alw21I | GWGCWC | 1 cut(s) | 136 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 104 |
| AoxI | GGCC | 1 cut(s) | 198 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| ApoI | RAATTY | 1 cut(s) | 64 |
| AxyI | CCTNAGG | 1 cut(s) | 45 |
| Bbv12I | GWGCWC | 1 cut(s) | 136 |
| BbvI | GCAGC | 1 cut(s) | 88 |
| BccI | CCATC | 2 cut(s) | 65, 122 |
| BceAI | ACGGC | 1 cut(s) | 213 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| BsaBI | GATNNNNATC | 1 cut(s) | 12 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 30, 47 |
| Bse21I | CCTNAGG | 1 cut(s) | 45 |
| Bse8I | GATNNNNATC | 1 cut(s) | 12 |
| BseGI | GGATG | 1 cut(s) | 114 |
| BseJI | GATNNNNATC | 1 cut(s) | 12 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 30, 47 |
| BseMII | CTCAG | 1 cut(s) | 36 |
| BseRI | GAGGAG | 1 cut(s) | 30 |
| BseXI | GCAGC | 1 cut(s) | 88 |
| BseYI | CCCAGC | 1 cut(s) | 104 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BsiHKAI | GWGCWC | 1 cut(s) | 136 |
| BslFI | GGGAC | 1 cut(s) | 208 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 30, 47 |
| BsmFI | GGGAC | 1 cut(s) | 208 |
| BsnI | GGCC | 1 cut(s) | 200 |
| Bsp1286I | GDGCHC | 1 cut(s) | 136 |
| Bsp143I | GATC | 2 cut(s) | 7, 121 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BspCNI | CTCAG | 1 cut(s) | 37 |
| BssMI | GATC | 2 cut(s) | 7, 121 |
| Bst6I | CTCTTC | 1 cut(s) | 25 |
| BstDEI | CTNAG | 1 cut(s) | 45 |
| BstF5I | GGATG | 1 cut(s) | 114 |
| BstKTI | GATC | 2 cut(s) | 10, 124 |
| BstMBI | GATC | 2 cut(s) | 7, 121 |
| BstV1I | GCAGC | 1 cut(s) | 88 |
| Bsu36I | CCTNAGG | 1 cut(s) | 45 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtsCI | GGATG | 1 cut(s) | 114 |
| CaiI | CAGNNNCTG | 1 cut(s) | 104 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CviAII | CATG | 1 cut(s) | 208 |
| CviJI | RGCY | 7 cut(s) | 37, 61, 75, 101, 165, 200, 234 |
| CviKI_1 | RGCY | 7 cut(s) | 37, 61, 75, 101, 165, 200, 234 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DdeI | CTNAG | 1 cut(s) | 45 |
| DpnI | GATC | 2 cut(s) | 9, 123 |
| DpnII | GATC | 2 cut(s) | 7, 121 |
| Eam1104I | CTCTTC | 1 cut(s) | 25 |
| EarI | CTCTTC | 1 cut(s) | 25 |
| Eco57I | CTGAAG | 1 cut(s) | 197 |
| Eco81I | CCTNAGG | 1 cut(s) | 45 |
| FaeI | CATG | 1 cut(s) | 211 |
| FaiI | YATR | 2 cut(s) | 170, 209 |
| FaqI | GGGAC | 1 cut(s) | 208 |
| FatI | CATG | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| FokI | GGATG | 1 cut(s) | 101 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| GluI | GCNGC | 1 cut(s) | 102 |
| GsaI | CCCAGC | 1 cut(s) | 108 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| Hin1II | CATG | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 125, 153 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4V | TGCA | 1 cut(s) | 227 |
| HpyF3I | CTNAG | 1 cut(s) | 45 |
| Hsp92II | CATG | 1 cut(s) | 211 |
| Kzo9I | GATC | 2 cut(s) | 7, 121 |
| LmnI | GCTCC | 1 cut(s) | 139 |
| LpnPI | CCDG | 5 cut(s) | 18, 57, 90, 132, 150 |
| Lsp1109I | GCAGC | 1 cut(s) | 88 |
| MalI | GATC | 2 cut(s) | 9, 123 |
| MboI | GATC | 2 cut(s) | 7, 121 |
| MboII | GAAGA | 1 cut(s) | 12 |
| MfeI | CAATTG | 1 cut(s) | 222 |
| MhlI | GDGCHC | 1 cut(s) | 136 |
| MluCI | AATT | 2 cut(s) | 64, 222 |
| MmeI | TCCRAC | 1 cut(s) | 11 |
| MnlI | CCTC | 5 cut(s) | 28, 40, 48, 51, 229 |
| MspA1I | CMGCKG | 1 cut(s) | 101 |
| MunI | CAATTG | 1 cut(s) | 222 |
| NdeII | GATC | 2 cut(s) | 7, 121 |
| NlaIII | CATG | 1 cut(s) | 211 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 30 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| PspFI | CCCAGC | 1 cut(s) | 104 |
| PstNI | CAGNNNCTG | 1 cut(s) | 104 |
| PvuII | CAGCTG | 1 cut(s) | 101 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| SatI | GCNGC | 1 cut(s) | 102 |
| Sau3AI | GATC | 2 cut(s) | 7, 121 |
| SduI | GDGCHC | 1 cut(s) | 136 |
| SetI | ASST | 3 cut(s) | 63, 103, 236 |
| Sse9I | AATT | 2 cut(s) | 64, 222 |
| TasI | AATT | 2 cut(s) | 64, 222 |
| TseI | GCWGC | 1 cut(s) | 101 |
| TspDTI | ATGAA | 1 cut(s) | 157 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 30 |
| XapI | RAATTY | 1 cut(s) | 64 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 125 |