Rorug06G0017700

Receptor-like cytosolic serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
2386247 .. 2388034
1788 bp
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UTR
Exon/CDS
Intron
Rorug06G0017700.1

Sequence Viewer

Length: 189 bp
ATGGCACTGAATCGATGTGGGTTTTGTATTGGAATTTTGAGCAAGACTGGTGAAAATGGACTCAGTTGCTTGACTTGTTACAACTTCTTCATCTTCACCTTTGGGGTGGCTCCATGGATACCATATACCATAAAAGGTATTTACCCCGCTTCTAAAAACATCATGATTAAAAGCACTCAAAGCGGCTAG

Protein Analysis

62

Amino Acids

6.79

Weight (kDa)

9.1

Isoelectric Point (pI)

29.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 147, 183
AcsI RAATTY 1 cut(s) 33
ApoI RAATTY 1 cut(s) 33
AsuHPI GGTGA 2 cut(s) 62, 88
BciVI GTATCC 1 cut(s) 111
BfaI CTAG 1 cut(s) 187
BfuI GTATCC 1 cut(s) 111
BisI GCNGC 1 cut(s) 184
BlsI GCNGC 1 cut(s) 185
BmiI GGNNCC 1 cut(s) 111
Bsa29I ATCGAT 1 cut(s) 13
BsaJI CCNNGG 1 cut(s) 113
Bse1I ACTGG 1 cut(s) 52
BseCI ATCGAT 1 cut(s) 13
BseDI CCNNGG 1 cut(s) 113
BseMII CTCAG 1 cut(s) 76
BseNI ACTGG 1 cut(s) 52
BshVI ATCGAT 1 cut(s) 13
Bsp19I CCATGG 1 cut(s) 113
BspACI CCGC 2 cut(s) 147, 183
BspCNI CTCAG 1 cut(s) 75
BspDI ATCGAT 1 cut(s) 13
BspHI TCATGA 1 cut(s) 162
BspLI GGNNCC 1 cut(s) 111
BsrI ACTGG 1 cut(s) 52
BssECI CCNNGG 1 cut(s) 113
BssT1I CCWWGG 1 cut(s) 113
BstDEI CTNAG 1 cut(s) 62
BstDSI CCRYGG 1 cut(s) 113
BstMWI GCNNNNNNNGC 1 cut(s) 180
Bsu15I ATCGAT 1 cut(s) 13
BsuI GTATCC 1 cut(s) 111
BsuTUI ATCGAT 1 cut(s) 13
BtgI CCRYGG 1 cut(s) 113
BtsIMutI CAGTG 1 cut(s) 5
CciI TCATGA 1 cut(s) 162
ClaI ATCGAT 1 cut(s) 13
CviAII CATG 2 cut(s) 114, 163
CviJI RGCY 2 cut(s) 110, 186
CviKI_1 RGCY 2 cut(s) 110, 186
DdeI CTNAG 1 cut(s) 62
Eco130I CCWWGG 1 cut(s) 113
EcoT14I CCWWGG 1 cut(s) 113
ErhI CCWWGG 1 cut(s) 113
FaeI CATG 2 cut(s) 117, 166
FaiI YATR 5 cut(s) 115, 124, 126, 131, 164
FatI CATG 2 cut(s) 113, 162
FauI CCCGC 1 cut(s) 154
Fnu4HI GCNGC 1 cut(s) 184
Fsp4HI GCNGC 1 cut(s) 184
FspBI CTAG 1 cut(s) 187
GluI GCNGC 1 cut(s) 184
Hin1II CATG 2 cut(s) 117, 166
HinfI GANTC 2 cut(s) 10, 60
HphI GGTGA 2 cut(s) 62, 88
Hpy188III TCNNGA 1 cut(s) 163
HpyF10VI GCNNNNNNNGC 1 cut(s) 180
HpyF3I CTNAG 1 cut(s) 62
Hsp92II CATG 2 cut(s) 117, 166
LmnI GCTCC 1 cut(s) 115
LpnPI CCDG 1 cut(s) 33
MaeI CTAG 1 cut(s) 187
MaeIII GTNAC 1 cut(s) 77
MboII GAAGA 2 cut(s) 79, 85
MluCI AATT 1 cut(s) 33
MlyI GAGTC 1 cut(s) 54
MseI TTAA 1 cut(s) 168
MwoI GCNNNNNNNGC 1 cut(s) 180
NcoI CCATGG 1 cut(s) 113
NlaIII CATG 2 cut(s) 117, 166
NlaIV GGNNCC 1 cut(s) 111
PagI TCATGA 1 cut(s) 162
PfeI GAWTC 1 cut(s) 10
PkrI GCNGC 1 cut(s) 185
PleI GAGTC 1 cut(s) 54
PpsI GAGTC 1 cut(s) 54
PspN4I GGNNCC 1 cut(s) 111
SaqAI TTAA 1 cut(s) 168
SatI GCNGC 1 cut(s) 184
SchI GAGTC 1 cut(s) 54
SetI ASST 2 cut(s) 101, 139
SgeI CNNG 7 cut(s) 55, 60, 82, 87, 126, 158, 175
Sse9I AATT 1 cut(s) 33
SsiI CCGC 2 cut(s) 147, 183
SspMI CTAG 1 cut(s) 187
StyI CCWWGG 1 cut(s) 113
TaqI TCGA 1 cut(s) 13
TasI AATT 1 cut(s) 33
TauI GCSGC 1 cut(s) 186
TfiI GAWTC 1 cut(s) 10
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TscAI CASTG 1 cut(s) 12
TspDTI ATGAA 1 cut(s) 79
TspRI CASTG 1 cut(s) 12
XapI RAATTY 1 cut(s) 33
XspI CTAG 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.