Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010769

Physical Location & Seq

Genomic Coordinates Forward (+)

6237816 .. 6248269

Gene Structure 10454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0047200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGATGAAGATTTAAGCGAAAAGGAGTCATTGCTGGCTCGCATTCAGCAGGTGGAACATGAGCGTGATGAATTACGTAAAGACATCGAACAATTGTGTATGCAGCAAGCTGGGCCAGGCTACCTTGTTGTGGCTACTAAGATGCATTTTCAAAGGACAGCTGGCTTGGAGCAGGAGATTGAGAACCTGAAAAAGAAGCTAGCTACTTGCTCAAGAGAGAACGTGAATCTTCAAGAGGAGCTCTCTGAGGCTTATAGAATCAAAGGCCAGTTGGCTGATTTGCATAATGCAGAGGTTGCAAAGAATTTGGAAGCTGAGAAGCAGCTTAAATTTTTCCAGGGCTGTGTAGCTGCAGCTTTTGCCGAACGGGATCAGTCCATAATGGAGGCTGAGACGGCTAGAGAGAAAGAGGAGCTCATGTCAAAGAAATTGAGTGAGATAGAGAAGAGGTTAGAAGAGCATACTGCAGATTGTTTTGAACAGAAGAAACTTAATGATAAATTGCAAACTGATTTAGCAATGCAAGAGGAGCAGAATGCAACTTTTAAGAAGGTCATCAATAAGTTTTATGAGATCAGGCAGGATTCTTCGGAGGGATTTGGGAATACAAGTTGGGACACCAAATGTGCATGCCTTTTGGATGATCCTGCAGAATGGTGGAGTTTCAATGACACTTCTACATCTAAATATATTAGTTCATTAGAAGAAGAGCTCGAGAGGGTGAGGATCTCTGCTGGTAATCTTCAAAACAGGCTACGAGTGGGTTTGGAAATTGAAAATCATTTAAAGAGGAGAGTTTCGGAATTGGAAAAGAAGAAAATCCGTTCAGATGGAATGATAAAAAAGGAGATGGCAGAGTTACGTCATCACCATTCTCAGCATAAAGTTCACATCATAAGTTTACTTAATGAGGGAAGCAGTTGTATCAAATCAATAATTGATGCAGTGGAGAAAAAGTGTAGGCAAATTGATGCAAGCAGACTACAAAAGTTGGAGCCACCTATGGGAGATGTAAAGCAAGGTGAATCTGAATGTCAAGATGTACATGAAATTACAGATGCTGATCCCCAAGTGGTATTTAAGGATGGTGACCCTAGCTTATCAGACATGGTGGCAGTTGGGGAGGGTGATTCCTCTAAAGCCCTTGCACAGGCACTGGAAGACAAGGTTGCAACGTTATTGCTTTTATCACAGCAGGAAGAAAGACATTTACTGGACAGAAATGTGAATGCAGCTCTTCAAAGTAAAATAGATGAGCTTCAGAGAAACCTATTGCAGGTTACCAATGAGAAGGTCCAAGCTCTAATGGAGATGGCACAATTAAAGCAGGAATATCATCAACTCAAAGAGAGAATGGGTCAGGAGACGAAAAGAGGCAATTCATCTGCTCAAGTTGGGGACAGGAGAGTAGTTACACATGAAAGAGGTGGAAAACTAAAGAGCTTGCTGAAGAAAACGTACTTGAGCCATTGGGTTGGAAATCTAGACCTTAGGGGAAATGAAGCTGAATCTGACCTAAATAGCATGGAGTTTGTGAGGATGAAGATTGAAAATGCGACCCTTAGGGAAACCATTGGAAGTATCGAACATCTGACTACTACAGTTCATAGGCTTCGTCTATCGCTTTTAAAGGCCAAGGAGATGGTGACTTCTGGAGACTCGATGCTTAGTAGCATGTTAGAAACTCTAGACAACATTAGTAACGAGGCAAAACTAGTGAAGACCGCACTAGGAAGTTCCCTACCACTTAGTTGGTCAGCAGAAGCAGATGTGGAATTCAGCGGTCATAATGTTAGCAGTGAGGCTGGTATCGTATATGGGGAGCCCATCCATGAGAAGATAGATTCAGTTTATGCTGTGGGGATTGAGATGGTGGAACTCCTGACATTAGCATCGCAGATATTAAAGGACAACACAAGCAAAAGTGGGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019538 GO:0019941 GO:0030163 GO:0032991 GO:0034657 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CLTH zf-RING_UBOX

Protein Analysis

644

Amino Acids

72.77

Weight (kDa)

5.37

Isoelectric Point (pI)

46.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09630
fragaria_vesca	FvH4_2g11060
malus_domestica	MD10G1057900.v1.1
prunus_persica	Prupe.8G076700_v2.0.a1 Prupe.8G076700_v2.0.a1 Prupe.8G076700_v2.0.a1 Prupe.8G076700_v2.0.a1 Prupe.8G076700_v2.0.a1
pyrus_communis	pycom10g04460
rosa_chinensis	RchiOBHm_Chr6g0269261
rosa_laevigata	RLG00000013867
rosa_roxburghii	Rroxscaffold_7G00198900
rosa_rugosa	Rorug06G0046900 Rorug06G0047000 Rorug06G0047100 Rorug06G0047200
rosa_samantha	Rh6AG166700 Rh6BG172300 Rh6DG157800
rosa_wichuraiana	Rw6G014410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	40
Acc36I	ACCTGC	2 cut(s)	40, 1267
AciI	CCGC	2 cut(s)	1725, 1782
AclI	AACGTT	1 cut(s)	1175
AclWI	GGATC	4 cut(s)	378, 638, 734, 1058
AcsI	RAATTY	3 cut(s)	304, 329, 1775
AcuI	CTGAAG	2 cut(s)	1244, 1469
AfaI	GTAC	2 cut(s)	1044, 1460
AfiI	CCNNNNNNNGG	4 cut(s)	130, 1004, 1150, 1276
AgsI	TTSAA	8 cut(s)	152, 233, 479, 667, 746, 776, 1241, 1550
AhlI	ACTAGT	1 cut(s)	1714
AjnI	CCWGG	2 cut(s)	115, 336
Alw21I	GWGCWC	3 cut(s)	243, 417, 714
Alw26I	GTCTC	3 cut(s)	386, 1358, 1650
AlwI	GGATC	4 cut(s)	378, 638, 734, 1058
AlwNI	CAGNNNCTG	2 cut(s)	1061, 1156
Ama87I	CYCGRG	1 cut(s)	713
AoxI	GGCC	3 cut(s)	113, 265, 1632
ApeKI	GCWGC	5 cut(s)	103, 322, 350, 353, 1232
ApoI	RAATTY	3 cut(s)	304, 329, 1775
AspS9I	GGNCC	3 cut(s)	113, 1294, 1929
AsuHPI	GGTGA	6 cut(s)	733, 860, 1034, 1100, 1139, 1657
AsuNHI	GCTAGC	1 cut(s)	199
AvaI	CYCGRG	1 cut(s)	713
AvaII	GGWCC	2 cut(s)	1294, 1929
AxyI	CCTNAGG	2 cut(s)	1490, 1562
BanII	GRGCYC	4 cut(s)	243, 417, 714, 1827
BarI	GAAGNNNNNNTAC	2 cut(s)	1442, 1474
BbsI	GAAGAC	2 cut(s)	1167, 1727
Bbv12I	GWGCWC	3 cut(s)	243, 417, 714
BbvI	GCAGC	5 cut(s)	115, 334, 337, 365, 1244
BccI	CCATC	7 cut(s)	824, 844, 1079, 1306, 1636, 1835, 1864
BceAI	ACGGC	1 cut(s)	411
BciT130I	CCWGG	2 cut(s)	117, 338
BcoDI	GTCTC	3 cut(s)	386, 1358, 1650
BcuI	ACTAGT	1 cut(s)	1714
BfaI	CTAG	7 cut(s)	200, 399, 1095, 1484, 1688, 1715, 1730
BfmI	CTRYAG	4 cut(s)	351, 465, 648, 1599
BfuAI	ACCTGC	2 cut(s)	40, 1267
BisI	GCNGC	5 cut(s)	104, 323, 351, 354, 1233
BlsI	GCNGC	5 cut(s)	105, 324, 352, 355, 1234
Bme1390I	CCNGG	2 cut(s)	117, 338
Bme18I	GGWCC	2 cut(s)	1294, 1929
BmeT110I	CYCGRG	1 cut(s)	713
BmgT120I	GGNCC	3 cut(s)	113, 1294, 1929
BmiI	GGNNCC	3 cut(s)	996, 1824, 1930
BmrFI	CCNGG	2 cut(s)	117, 338
BmsI	GCATC	6 cut(s)	132, 931, 961, 1048, 1653, 1901
BmtI	GCTAGC	1 cut(s)	203
BpiI	GAAGAC	2 cut(s)	1167, 1727
BplI	GAGNNNNNCTC	2 cut(s)	227, 259
BpmI	CTGGAG	1 cut(s)	1674
BpuEI	CTTGAG	3 cut(s)	196, 1374, 1483
BsaAI	YACGTR	1 cut(s)	77
BsaBI	GATNNNNATC	1 cut(s)	1062
BsaJI	CCNNGG	2 cut(s)	337, 1635
BsaXI	ACNNNNNCTCC	4 cut(s)	404, 434, 941, 971
Bsc4I	CCNNNNNNNGG	4 cut(s)	130, 1004, 1150, 1276
Bse1I	ACTGG	3 cut(s)	268, 1161, 1218
Bse21I	CCTNAGG	2 cut(s)	1490, 1562
Bse3DI	GCAATG	2 cut(s)	29, 525
Bse8I	GATNNNNATC	1 cut(s)	1062
BseBI	CCWGG	2 cut(s)	117, 338
BseDI	CCNNGG	2 cut(s)	337, 1635
BseGI	GGATG	5 cut(s)	10, 646, 1090, 1545, 1827
BseJI	GATNNNNATC	1 cut(s)	1062
BseLI	CCNNNNNNNGG	4 cut(s)	130, 1004, 1150, 1276
BseMI	GCAATG	2 cut(s)	29, 525
BseMII	CTCAG	4 cut(s)	237, 306, 381, 890
BseNI	ACTGG	3 cut(s)	268, 1161, 1218
BseRI	GAGGAG	4 cut(s)	251, 425, 542, 805
BseXI	GCAGC	5 cut(s)	115, 334, 337, 365, 1244
BseYI	CCCAGC	1 cut(s)	110
BshFI	GGCC	3 cut(s)	115, 267, 1634
BsiHKAI	GWGCWC	3 cut(s)	243, 417, 714
BsiHKCI	CYCGRG	1 cut(s)	713
BslFI	GGGAC	2 cut(s)	629, 1412
BslI	CCNNNNNNNGG	4 cut(s)	130, 1004, 1150, 1276
BsmAI	GTCTC	3 cut(s)	386, 1358, 1650
BsmBI	CGTCTC	2 cut(s)	386, 1358
BsmFI	GGGAC	2 cut(s)	629, 1412
BsmI	GAATGC	3 cut(s)	42, 541, 1234
BsnI	GGCC	3 cut(s)	115, 267, 1634
BsoBI	CYCGRG	1 cut(s)	713
Bsp1286I	GDGCHC	4 cut(s)	243, 417, 714, 1827
Bsp1407I	TGTACA	1 cut(s)	1042
Bsp143I	GATC	5 cut(s)	370, 573, 643, 726, 1063
BspACI	CCGC	2 cut(s)	1725, 1782
BspANI	GGCC	3 cut(s)	115, 267, 1634
BspCNI	CTCAG	4 cut(s)	238, 307, 382, 889
BspLI	GGNNCC	3 cut(s)	996, 1824, 1930
BspMAI	CTGCAG	3 cut(s)	355, 469, 652
BspMI	ACCTGC	2 cut(s)	40, 1267
BspOI	GCTAGC	1 cut(s)	203
BspPI	GGATC	4 cut(s)	378, 638, 734, 1058
BspQI	GCTCTTC	3 cut(s)	450, 702, 1242
BsrDI	GCAATG	2 cut(s)	29, 525
BsrGI	TGTACA	1 cut(s)	1042
BsrI	ACTGG	3 cut(s)	268, 1161, 1218
BssECI	CCNNGG	2 cut(s)	337, 1635
BssMI	GATC	5 cut(s)	370, 573, 643, 726, 1063
BssT1I	CCWWGG	1 cut(s)	1635
Bst2UI	CCWGG	2 cut(s)	117, 338
Bst4CI	ACNGT	1 cut(s)	1603
Bst6I	CTCTTC	4 cut(s)	440, 450, 702, 1242
BstAPI	GCANNNNNTGC	2 cut(s)	296, 359
BstAUI	TGTACA	1 cut(s)	1042
BstBAI	YACGTR	1 cut(s)	77
BstC8I	GCNNGC	8 cut(s)	36, 40, 108, 163, 201, 631, 976, 1445
BstDEI	CTNAG	9 cut(s)	138, 246, 315, 390, 876, 1490, 1562, 1667, 1748
BstEII	GGTNACC	2 cut(s)	1088, 1279
BstENI	CCTNNNNNAGG	2 cut(s)	1148, 1274
BstF5I	GGATG	5 cut(s)	10, 646, 1090, 1545, 1827
BstKTI	GATC	5 cut(s)	373, 576, 646, 729, 1066
BstMAI	GTCTC	3 cut(s)	386, 1358, 1650
BstMBI	GATC	5 cut(s)	370, 573, 643, 726, 1063
BstMWI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
BstNI	CCWGG	2 cut(s)	117, 338
BstNSI	RCATGY	2 cut(s)	633, 1678
BstPI	GGTNACC	2 cut(s)	1088, 1279
BstSCI	CCNGG	2 cut(s)	115, 336
BstSFI	CTRYAG	4 cut(s)	351, 465, 648, 1599
BstSNI	TACGTA	1 cut(s)	77
BstV1I	GCAGC	5 cut(s)	115, 334, 337, 365, 1244
BstV2I	GAAGAC	2 cut(s)	1167, 1727
BstX2I	RGATCY	1 cut(s)	726
BstXI	CCANNNNNNTGG	3 cut(s)	1475, 1642, 1752
BstYI	RGATCY	1 cut(s)	726
Bsu36I	CCTNAGG	2 cut(s)	1490, 1562
BsuRI	GGCC	3 cut(s)	115, 267, 1634
BtgZI	GCGATG	1 cut(s)	1878
BtsCI	GGATG	5 cut(s)	10, 646, 1090, 1545, 1827
BtsI	GCAGTG	2 cut(s)	951, 1804
BtsIMutI	CAGTG	3 cut(s)	951, 1154, 1804
BveI	ACCTGC	2 cut(s)	40, 1267
Cac8I	GCNNGC	8 cut(s)	36, 40, 108, 163, 201, 631, 976, 1445
CaiI	CAGNNNCTG	2 cut(s)	1061, 1156
Cfr13I	GGNCC	3 cut(s)	113, 1294, 1929
Csp6I	GTAC	2 cut(s)	1043, 1459
CviAII	CATG	9 cut(s)	59, 418, 630, 1046, 1108, 1418, 1525, 1675, 1832
CviQI	GTAC	2 cut(s)	1043, 1459
DdeI	CTNAG	9 cut(s)	138, 246, 315, 390, 876, 1490, 1562, 1667, 1748
DpnI	GATC	5 cut(s)	372, 575, 645, 728, 1065
DpnII	GATC	5 cut(s)	370, 573, 643, 726, 1063
DraI	TTTAAA	2 cut(s)	786, 1629
Eam1104I	CTCTTC	4 cut(s)	440, 450, 702, 1242
EarI	CTCTTC	4 cut(s)	440, 450, 702, 1242
Ecl136II	GAGCTC	3 cut(s)	241, 415, 712
Eco105I	TACGTA	1 cut(s)	77
Eco130I	CCWWGG	1 cut(s)	1635
Eco24I	GRGCYC	4 cut(s)	243, 417, 714, 1827
Eco47I	GGWCC	2 cut(s)	1294, 1929
Eco53kI	GAGCTC	3 cut(s)	241, 415, 712
Eco57I	CTGAAG	2 cut(s)	1244, 1469
Eco81I	CCTNAGG	2 cut(s)	1490, 1562
Eco88I	CYCGRG	1 cut(s)	713
Eco91I	GGTNACC	2 cut(s)	1088, 1279
EcoICRI	GAGCTC	3 cut(s)	241, 415, 712
EcoNI	CCTNNNNNAGG	2 cut(s)	1148, 1274
EcoO109I	RGGNCCY	1 cut(s)	1929
EcoO65I	GGTNACC	2 cut(s)	1088, 1279
EcoRI	GAATTC	1 cut(s)	1775
EcoRII	CCWGG	2 cut(s)	115, 336
EcoT14I	CCWWGG	1 cut(s)	1635
EcoT22I	ATGCAT	1 cut(s)	147
EcoT38I	GRGCYC	4 cut(s)	243, 417, 714, 1827
ErhI	CCWWGG	1 cut(s)	1635
Esp3I	CGTCTC	2 cut(s)	386, 1358
FaeI	CATG	9 cut(s)	62, 421, 633, 1049, 1111, 1421, 1528, 1678, 1835
FaqI	GGGAC	2 cut(s)	629, 1412
FatI	CATG	9 cut(s)	58, 417, 629, 1045, 1107, 1417, 1524, 1674, 1831
Fnu4HI	GCNGC	5 cut(s)	104, 323, 351, 354, 1233
FokI	GGATG	5 cut(s)	17, 653, 1097, 1552, 1814
FriOI	GRGCYC	4 cut(s)	243, 417, 714, 1827
Fsp4HI	GCNGC	5 cut(s)	104, 323, 351, 354, 1233
FspBI	CTAG	7 cut(s)	200, 399, 1095, 1484, 1688, 1715, 1730
GluI	GCNGC	5 cut(s)	104, 323, 351, 354, 1233
GsaI	CCCAGC	1 cut(s)	114
GsuI	CTGGAG	1 cut(s)	1674
HaeIII	GGCC	3 cut(s)	115, 267, 1634
Hin1II	CATG	9 cut(s)	62, 421, 633, 1049, 1111, 1421, 1528, 1678, 1835
HinfI	GANTC	9 cut(s)	26, 226, 258, 584, 1025, 1130, 1508, 1658, 1844
HphI	GGTGA	6 cut(s)	733, 860, 1034, 1100, 1139, 1657
Hpy166II	GTNNAC	2 cut(s)	889, 902
Hpy188I	TCNGA	9 cut(s)	247, 592, 802, 829, 1030, 1105, 1263, 1513, 1593
Hpy8I	GTNNAC	2 cut(s)	889, 902
HpyAV	CCTTC	2 cut(s)	544, 1285
HpyCH4III	ACNGT	1 cut(s)	1603
HpyCH4IV	ACGT	5 cut(s)	76, 222, 862, 1175, 1457
HpyF10VI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
HpyF3I	CTNAG	9 cut(s)	138, 246, 315, 390, 876, 1490, 1562, 1667, 1748
HpySE526I	ACGT	5 cut(s)	76, 222, 862, 1175, 1457
Hsp92II	CATG	9 cut(s)	62, 421, 633, 1049, 1111, 1421, 1528, 1678, 1835
Kzo9I	GATC	5 cut(s)	370, 573, 643, 726, 1063
LguI	GCTCTTC	3 cut(s)	450, 702, 1242
LmnI	GCTCC	6 cut(s)	169, 238, 412, 529, 994, 1822
Lsp1109I	GCAGC	5 cut(s)	115, 334, 337, 365, 1244
LweI	GCATC	6 cut(s)	132, 931, 961, 1048, 1653, 1901
MaeI	CTAG	7 cut(s)	200, 399, 1095, 1484, 1688, 1715, 1730
MaeII	ACGT	5 cut(s)	76, 222, 862, 1175, 1457
MaeIII	GTNAC	6 cut(s)	858, 1088, 1279, 1411, 1645, 1700
MalI	GATC	5 cut(s)	372, 575, 645, 728, 1065
MboI	GATC	5 cut(s)	370, 573, 643, 726, 1063
MfeI	CAATTG	1 cut(s)	92
MflI	RGATCY	1 cut(s)	726
MhlI	GDGCHC	4 cut(s)	243, 417, 714, 1827
MlyI	GAGTC	2 cut(s)	35, 1652
MmeI	TCCRAC	2 cut(s)	972, 1456
Mph1103I	ATGCAT	1 cut(s)	147
MslI	CAYNNNNRTG	1 cut(s)	63
MspA1I	CMGCKG	2 cut(s)	161, 1782
MspR9I	CCNGG	2 cut(s)	117, 338
MunI	CAATTG	1 cut(s)	92
Mva1269I	GAATGC	3 cut(s)	42, 541, 1234
MvaI	CCWGG	2 cut(s)	117, 338
MwoI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
NdeII	GATC	5 cut(s)	370, 573, 643, 726, 1063
NheI	GCTAGC	1 cut(s)	199
NlaIII	CATG	9 cut(s)	62, 421, 633, 1049, 1111, 1421, 1528, 1678, 1835
NlaIV	GGNNCC	3 cut(s)	996, 1824, 1930
NmuCI	GTSAC	2 cut(s)	1088, 1645
NsiI	ATGCAT	1 cut(s)	147
NspI	RCATGY	2 cut(s)	633, 1678
PaeI	GCATGC	1 cut(s)	633
PaeR7I	CTCGAG	1 cut(s)	713
PaqCI	CACCTGC	1 cut(s)	40
PciSI	GCTCTTC	3 cut(s)	450, 702, 1242
PctI	GAATGC	3 cut(s)	42, 541, 1234
PfeI	GAWTC	7 cut(s)	226, 258, 584, 1025, 1130, 1508, 1844
PkrI	GCNGC	5 cut(s)	105, 324, 352, 355, 1234
PleI	GAGTC	2 cut(s)	34, 1652
PpsI	GAGTC	2 cut(s)	34, 1652
Ppu21I	YACGTR	1 cut(s)	77
PpuMI	RGGWCCY	1 cut(s)	1929
Psp124BI	GAGCTC	3 cut(s)	243, 417, 714
Psp1406I	AACGTT	1 cut(s)	1175
Psp5II	RGGWCCY	1 cut(s)	1929
Psp6I	CCWGG	2 cut(s)	115, 336
PspEI	GGTNACC	2 cut(s)	1088, 1279
PspFI	CCCAGC	1 cut(s)	110
PspGI	CCWGG	2 cut(s)	115, 336
PspN4I	GGNNCC	3 cut(s)	996, 1824, 1930
PspPI	GGNCC	3 cut(s)	113, 1294, 1929
PspPPI	RGGWCCY	1 cut(s)	1929
PstI	CTGCAG	3 cut(s)	355, 469, 652
PstNI	CAGNNNCTG	2 cut(s)	1061, 1156
PsuI	RGATCY	1 cut(s)	726
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	2 cut(s)	1044, 1460
RsaNI	GTAC	2 cut(s)	1043, 1459
RseI	CAYNNNNRTG	1 cut(s)	63
SacI	GAGCTC	3 cut(s)	243, 417, 714
SapI	GCTCTTC	3 cut(s)	450, 702, 1242
SatI	GCNGC	5 cut(s)	104, 323, 351, 354, 1233
Sau3AI	GATC	5 cut(s)	370, 573, 643, 726, 1063
Sau96I	GGNCC	3 cut(s)	113, 1294, 1929
SchI	GAGTC	2 cut(s)	35, 1652
ScrFI	CCNGG	2 cut(s)	117, 338
SduI	GDGCHC	4 cut(s)	243, 417, 714, 1827
SfaNI	GCATC	6 cut(s)	132, 931, 961, 1048, 1653, 1901
SfcI	CTRYAG	4 cut(s)	351, 465, 648, 1599
Sfr274I	CTCGAG	1 cut(s)	713
SinI	GGWCC	2 cut(s)	1294, 1929
SlaI	CTCGAG	1 cut(s)	713
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	4 cut(s)	211, 713, 1389, 1462
SmoI	CTYRAG	4 cut(s)	211, 713, 1389, 1462
SnaBI	TACGTA	1 cut(s)	77
SpeI	ACTAGT	1 cut(s)	1714
SphI	GCATGC	1 cut(s)	633
SsiI	CCGC	2 cut(s)	1725, 1782
SspMI	CTAG	7 cut(s)	200, 399, 1095, 1484, 1688, 1715, 1730
SstI	GAGCTC	3 cut(s)	243, 417, 714
StyD4I	CCNGG	2 cut(s)	115, 336
StyI	CCWWGG	1 cut(s)	1635
TaaI	ACNGT	1 cut(s)	1603
TaiI	ACGT	5 cut(s)	79, 225, 865, 1178, 1460
TaqI	TCGA	4 cut(s)	87, 714, 1584, 1661
TatI	WGTACW	1 cut(s)	1042
TfiI	GAWTC	7 cut(s)	226, 258, 584, 1025, 1130, 1508, 1844
TscAI	CASTG	3 cut(s)	951, 1161, 1804
TseFI	GTSAC	2 cut(s)	1088, 1645
TseI	GCWGC	5 cut(s)	103, 322, 350, 353, 1232
Tsp45I	GTSAC	2 cut(s)	1088, 1645
TspDTI	ATGAA	9 cut(s)	21, 84, 687, 1062, 1371, 1434, 1515, 1556, 1595
TspGWI	ACGGA	1 cut(s)	812
TspRI	CASTG	3 cut(s)	951, 1161, 1804
VpaK11BI	GGWCC	2 cut(s)	1294, 1929
XagI	CCTNNNNNAGG	2 cut(s)	1148, 1274
XapI	RAATTY	3 cut(s)	304, 329, 1775
XbaI	TCTAGA	2 cut(s)	1483, 1687
XceI	RCATGY	2 cut(s)	633, 1678
XhoI	CTCGAG	1 cut(s)	713
XspI	CTAG	7 cut(s)	200, 399, 1095, 1484, 1688, 1715, 1730
Zsp2I	ATGCAT	1 cut(s)	147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.