Pentatricopeptide repeat-containing protein At5g09450
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09450 |
| fragaria_vesca | FvH4_2g11810 FvH4_2g11810 |
| malus_domestica | MD05G1046600.v1.1 MD10G1053300.v1.1 |
| prunus_persica | Prupe.8G066700_v2.0.a1 Prupe.8G066700_v2.0.a1 Prupe.8G066700_v2.0.a1 |
| pyrus_communis | pycom05g03840 pycom10g04040 |
| rosa_chinensis | RchiOBHm_Chr6g0271371 |
| rosa_laevigata | RLG00000013730 |
| rosa_multiflora | Rmu_sc0004866.1_g000034 |
| rosa_roxburghii | Rroxscaffold_7G00197060 |
| rosa_rugosa | Rorug06G0060700 Rorug06G0060700 |
| rosa_samantha | Rh6AG179800 Rh6BG183100 Rh6CG179700 Rh6DG171400 |
| rosa_wichuraiana | Rw6G015450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 93 |
| AdeI | CACNNNGTG | 1 cut(s) | 241 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 143 |
| AflIII | ACRYGT | 1 cut(s) | 66 |
| AgsI | TTSAA | 3 cut(s) | 178, 194, 301 |
| Alw26I | GTCTC | 1 cut(s) | 209 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 91 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApeKI | GCWGC | 1 cut(s) | 232 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 68 |
| AsuC2I | CCSGG | 1 cut(s) | 49 |
| BbvI | GCAGC | 1 cut(s) | 244 |
| BccI | CCATC | 2 cut(s) | 14, 245 |
| BcnI | CCSGG | 1 cut(s) | 49 |
| BcoDI | GTCTC | 1 cut(s) | 209 |
| BisI | GCNGC | 1 cut(s) | 233 |
| BlsI | GCNGC | 1 cut(s) | 234 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 171 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 189, 221 |
| BpuMI | CCSGG | 1 cut(s) | 49 |
| BsaJI | CCNNGG | 2 cut(s) | 48, 137 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 27 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 143 |
| Bse1I | ACTGG | 1 cut(s) | 96 |
| BseDI | CCNNGG | 2 cut(s) | 48, 137 |
| BseGI | GGATG | 1 cut(s) | 177 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 143 |
| BseMII | CTCAG | 2 cut(s) | 98, 220 |
| BseNI | ACTGG | 1 cut(s) | 96 |
| BseXI | GCAGC | 1 cut(s) | 244 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsiSI | CCGG | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 143 |
| BsmAI | GTCTC | 1 cut(s) | 209 |
| BsmBI | CGTCTC | 1 cut(s) | 209 |
| BsnI | GGCC | 1 cut(s) | 95 |
| Bsp143I | GATC | 2 cut(s) | 199, 209 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspCNI | CTCAG | 2 cut(s) | 97, 219 |
| BspHI | TCATGA | 1 cut(s) | 225 |
| BsrI | ACTGG | 1 cut(s) | 96 |
| BssECI | CCNNGG | 2 cut(s) | 48, 137 |
| BssMI | GATC | 2 cut(s) | 199, 209 |
| Bst4CI | ACNGT | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 45 |
| BstDEI | CTNAG | 2 cut(s) | 84, 206 |
| BstDSI | CCRYGG | 1 cut(s) | 137 |
| BstF5I | GGATG | 1 cut(s) | 177 |
| BstKTI | GATC | 2 cut(s) | 202, 212 |
| BstMAI | GTCTC | 1 cut(s) | 209 |
| BstMBI | GATC | 2 cut(s) | 199, 209 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 244 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtgI | CCRYGG | 1 cut(s) | 137 |
| BtsCI | GGATG | 1 cut(s) | 177 |
| Cac8I | GCNNGC | 1 cut(s) | 45 |
| CaiI | CAGNNNCTG | 1 cut(s) | 91 |
| CciI | TCATGA | 1 cut(s) | 225 |
| CviAII | CATG | 2 cut(s) | 17, 226 |
| CviJI | RGCY | 3 cut(s) | 47, 60, 95 |
| CviKI_1 | RGCY | 3 cut(s) | 47, 60, 95 |
| DdeI | CTNAG | 2 cut(s) | 84, 206 |
| DpnI | GATC | 2 cut(s) | 201, 211 |
| DpnII | GATC | 2 cut(s) | 199, 209 |
| DraIII | CACNNNGTG | 1 cut(s) | 241 |
| EaeI | YGGCCR | 1 cut(s) | 93 |
| Eco32I | GATATC | 1 cut(s) | 260 |
| EcoRV | GATATC | 1 cut(s) | 260 |
| Esp3I | CGTCTC | 1 cut(s) | 209 |
| FaeI | CATG | 2 cut(s) | 20, 229 |
| FaiI | YATR | 3 cut(s) | 18, 227, 239 |
| FatI | CATG | 2 cut(s) | 16, 225 |
| Fnu4HI | GCNGC | 1 cut(s) | 233 |
| FokI | GGATG | 1 cut(s) | 184 |
| Fsp4HI | GCNGC | 1 cut(s) | 233 |
| GluI | GCNGC | 1 cut(s) | 233 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| HapII | CCGG | 1 cut(s) | 48 |
| Hin1II | CATG | 2 cut(s) | 20, 229 |
| HpaII | CCGG | 1 cut(s) | 48 |
| Hpy188I | TCNGA | 3 cut(s) | 87, 121, 209 |
| Hpy188III | TCNNGA | 2 cut(s) | 178, 226 |
| HpyAV | CCTTC | 2 cut(s) | 162, 188 |
| HpyCH4III | ACNGT | 1 cut(s) | 126 |
| HpyCH4IV | ACGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 2 cut(s) | 131, 184 |
| HpyF3I | CTNAG | 2 cut(s) | 84, 206 |
| HpySE526I | ACGT | 1 cut(s) | 68 |
| Hsp92II | CATG | 2 cut(s) | 20, 229 |
| Kzo9I | GATC | 2 cut(s) | 199, 209 |
| LmnI | GCTCC | 1 cut(s) | 5 |
| LpnPI | CCDG | 4 cut(s) | 46, 61, 77, 150 |
| Lsp1109I | GCAGC | 1 cut(s) | 244 |
| LweI | GCATC | 1 cut(s) | 171 |
| MaeII | ACGT | 1 cut(s) | 68 |
| MalI | GATC | 2 cut(s) | 201, 211 |
| MboI | GATC | 2 cut(s) | 199, 209 |
| MnlI | CCTC | 2 cut(s) | 50, 222 |
| MroXI | GAANNNNTTC | 1 cut(s) | 68 |
| MseI | TTAA | 1 cut(s) | 306 |
| MslI | CAYNNNNRTG | 1 cut(s) | 21 |
| MspI | CCGG | 1 cut(s) | 48 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| NciI | CCSGG | 1 cut(s) | 49 |
| NdeII | GATC | 2 cut(s) | 199, 209 |
| NlaIII | CATG | 2 cut(s) | 20, 229 |
| PagI | TCATGA | 1 cut(s) | 225 |
| PdmI | GAANNNNTTC | 1 cut(s) | 68 |
| PkrI | GCNGC | 1 cut(s) | 234 |
| PstNI | CAGNNNCTG | 1 cut(s) | 91 |
| RseI | CAYNNNNRTG | 1 cut(s) | 21 |
| SaqAI | TTAA | 1 cut(s) | 306 |
| SatI | GCNGC | 1 cut(s) | 233 |
| Sau3AI | GATC | 2 cut(s) | 199, 209 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SetI | ASST | 1 cut(s) | 71 |
| SfaNI | GCATC | 1 cut(s) | 171 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 21 |
| SspI | AATATT | 2 cut(s) | 269, 304 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TaaI | ACNGT | 1 cut(s) | 126 |
| TaiI | ACGT | 1 cut(s) | 71 |
| Tru1I | TTAA | 1 cut(s) | 306 |
| Tru9I | TTAA | 1 cut(s) | 306 |
| TseI | GCWGC | 1 cut(s) | 232 |
| TspDTI | ATGAA | 1 cut(s) | 214 |
| TspGWI | ACGGA | 2 cut(s) | 51, 126 |
| XmnI | GAANNNNTTC | 1 cut(s) | 68 |