Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004045

Physical Location & Seq

Genomic Coordinates Forward (+)

11217731 .. 11220498

Gene Structure 2768 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0084700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGAACAGACGGATCACAGAGAATGATCGGAACCGCCAAACCGCCGCAACCAGCTCCGCCACCACAATTCCTTACTTACCTGACAACGTCGTCGCAAAAATCCTGTCCTTCCTTCCGATCAATCTAGCGGCCCAGGCGAACACCGTTTCGAAACAATGGGCAGCCCTGTGGCCTTCGTTCCCAGTAATCGATCTCGACGAGGCCGATCCGATCAATTGCGAACTCTATATCGAACCTGGACGTTTCCTCAGCTTCTTGCACCATTCTGTCAGACGATGCGGGGATCAAAAGCGCTTGGACAAGTTGAGGATTCGAGCCAACCTTCGATACGCCTACGTTTTGGTTAGAGAATGGGTTGATTTTGCAATTGATAGGTGTGTCAAAGAGTTAGATCTTCGAAATTTGGGTGAGAATAGGTACTACCTCCTAGCGCATAACGTTTTAACTCTGAAATCTTTAACTAGTCTGAATTTGGAGAATGTGAGAGTGTATGCAAGTTCTGGAATTGATGGTCCTGTTAGCCTACCCTTACTGAAAACCATGTCACTCACGGAGTTGGAAATTTTCGACGATGAGGAGGACTGGGCCATTTGCGCCGTCCCCAGCTTAATTTCGGGGTGTCCTAGCATGGAGCAATTGTCAATTAAGAAATGTAAGCTTGGCTACTCTACCATGGAGCTTGAAATTTCAAGTTACAGTCTCAAATCCTTGGAAATTATGCATTGCCATTGTATGAATTTGGTGGTTACCGCCAAGAATCTCGAGTCTTTTACATTCTATTCGGATTGTACCTGTCCTTACCATAAGACTATGTACTTGTGGGAATGTGATAACTTGAAACATGTGGACATCTCTTGTTTGGGGTTGAAACAGCTTCTACTGCATACATGCCTCAAAACTTTGGAGAACTCGTTTTACACTCCAAATCTAGAGGCTTTTGAGTTTAGCGGATATCTGAAGGCCAAGGTCCATTTTGTGGATGCTCCATCAAAGTTATTAAAGGCTACAATCAGAGTTTGGGAGACCTCATGGCCCATTGAATATTATTCTGCTATGAGAGGTTTTCTTGAAAGTTTCAATTGCTCCAAAAAAGTGAAGCTACATATTGAGGATGCTGAGGGTGTCATAATACCAGAACATCGGAGAATGGAATGGTCTTCCCCATTACCTAGTATTAAGCAGCTGCAGCTATACTTTTCTGCTCCATTGGGGGACAGAGAATATTGTTTGAGACCTTCATTGATTTGGATGGCGCCATCTGCTGAGATTCTACCATTTCTAGATAATGATGATGATGATGAGGATGACAATGATGATGACTATGATGATGATGATGACAATGATGACGACGATGATGACCACAACGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L6

Protein Analysis

457

Amino Acids

52.54

Weight (kDa)

4.79

Isoelectric Point (pI)

49.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_At1g61320_AtMIF1	PF23622	111 - 263	2.2e-07	At1g61320/AtMIF1, LRR domain
LRR_At5g56370	PF24758	116 - 283	9.4e-14	FBD-associated F-box protein At5g56370, LRR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004045)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18400
fragaria_vesca	FvH4_2g13340 FvH4_5g39530
malus_domestica	MD05G1029600.v1.1
prunus_persica	Prupe.7G092200_v2.0.a1 Prupe.7G092200_v2.0.a1 Prupe.7G092200_v2.0.a1 Prupe.7G092200_v2.0.a1 Prupe.7G092200_v2.0.a1 Prupe.7G092200_v2.0.a1
pyrus_communis	pycom05g02090
rosa_chinensis	RchiOBHm_Chr6g0274821 RchiOBHm_Chr7g0241841
rosa_laevigata	RLG00000000539
rosa_multiflora	Rmu_sc0001865.1_g000008
rosa_roxburghii	Rroxscaffold_3G00218620 Rroxscaffold_7G00193930
rosa_rugosa	Rorug06G0084700 Rorug06G0084700 Rorug06G0084800 Rorug06G0084900 Rorug07G0347900
rosa_samantha	Rh6AG200500 Rh6BG203900 Rh6CG204100 Rh6CG204200 Rh6DG195500 Rh7AG502000 Rh7BG473400 Rh7CG518500 Rh7DG487300
rosa_wichuraiana	Rw6G017440 Rw7G042440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	89
AccB1I	GGYRCC	1 cut(s)	1252
AccB7I	CCANNNNNTGG	1 cut(s)	976
AciI	CCGC	8 cut(s)	34, 42, 45, 57, 128, 279, 750, 948
AclI	AACGTT	1 cut(s)	438
AclWI	GGATC	3 cut(s)	20, 200, 291
AcsI	RAATTY	5 cut(s)	400, 469, 561, 684, 736
AcuI	CTGAAG	1 cut(s)	977
AcyI	GRCGYC	1 cut(s)	1253
AfaI	GTAC	3 cut(s)	419, 790, 815
AfeI	AGCGCT	1 cut(s)	293
AfiI	CCNNNNNNNGG	1 cut(s)	976
AflIII	ACRYGT	1 cut(s)	841
AgsI	TTSAA	7 cut(s)	683, 690, 838, 868, 1040, 1070, 1078
AhlI	ACTAGT	1 cut(s)	461
AjnI	CCWGG	2 cut(s)	132, 235
AluBI	AGCT	9 cut(s)	54, 252, 606, 658, 679, 874, 1099, 1183, 1189
AluI	AGCT	9 cut(s)	54, 252, 606, 658, 679, 874, 1099, 1183, 1189
Alw26I	GTCTC	3 cut(s)	704, 1016, 1225
AlwI	GGATC	3 cut(s)	20, 200, 291
Ama87I	CYCGRG	1 cut(s)	761
Aor51HI	AGCGCT	1 cut(s)	293
AoxI	GGCC	6 cut(s)	129, 170, 201, 585, 960, 1031
ApeKI	GCWGC	4 cut(s)	161, 1180, 1183, 1186
ApoI	RAATTY	5 cut(s)	400, 469, 561, 684, 736
ArsI	GACNNNNNNTTYG	2 cut(s)	89, 121
AspLEI	GCGC	4 cut(s)	294, 433, 596, 1255
AspS9I	GGNCC	5 cut(s)	130, 512, 585, 967, 1032
AsuHPI	GGTGA	1 cut(s)	419
AsuII	TTCGAA	2 cut(s)	149, 397
AvaI	CYCGRG	1 cut(s)	761
AvaII	GGWCC	2 cut(s)	512, 967
BanI	GGYRCC	1 cut(s)	1252
BbsI	GAAGAC	1 cut(s)	1149
BbvCI	CCTCAGC	2 cut(s)	248, 1116
BbvI	GCAGC	4 cut(s)	173, 1170, 1192, 1198
BccI	CCATC	4 cut(s)	503, 994, 1243, 1264
BceAI	ACGGC	1 cut(s)	581
BciT130I	CCWGG	2 cut(s)	134, 237
BcoDI	GTCTC	3 cut(s)	704, 1016, 1225
BcuI	ACTAGT	1 cut(s)	461
BfaI	CTAG	7 cut(s)	125, 428, 462, 624, 929, 1170, 1280
BfmI	CTRYAG	1 cut(s)	1184
BfoI	RGCGCY	2 cut(s)	295, 1256
BglII	AGATCT	1 cut(s)	391
BisI	GCNGC	6 cut(s)	45, 129, 162, 1181, 1184, 1187
BlsI	GCNGC	6 cut(s)	46, 130, 163, 1182, 1185, 1188
Bme1390I	CCNGG	2 cut(s)	134, 237
Bme18I	GGWCC	2 cut(s)	512, 967
BmeT110I	CYCGRG	1 cut(s)	761
BmgT120I	GGNCC	5 cut(s)	130, 512, 585, 967, 1032
BmiI	GGNNCC	2 cut(s)	32, 1254
BmrFI	CCNGG	2 cut(s)	134, 237
BmrI	ACTGGG	2 cut(s)	176, 592
BmsI	GCATC	3 cut(s)	266, 970, 1102
BmuI	ACTGGG	2 cut(s)	176, 592
BpiI	GAAGAC	1 cut(s)	1149
Bpu10I	CCTNAGC	2 cut(s)	248, 1116
Bpu14I	TTCGAA	2 cut(s)	149, 397
Bsa29I	ATCGAT	1 cut(s)	189
BsaHI	GRCGYC	1 cut(s)	1253
BsaI	GGTCTC	2 cut(s)	1016, 1225
BsaJI	CCNNGG	4 cut(s)	132, 672, 708, 963
BsaXI	ACNNNNNCTCC	4 cut(s)	623, 653, 896, 926
Bsc4I	CCNNNNNNNGG	1 cut(s)	976
Bse1I	ACTGG	2 cut(s)	182, 587
Bse3DI	GCAATG	1 cut(s)	721
BseBI	CCWGG	2 cut(s)	134, 237
BseCI	ATCGAT	1 cut(s)	189
BseDI	CCNNGG	4 cut(s)	132, 672, 708, 963
BseGI	GGATG	4 cut(s)	985, 1117, 1254, 1309
BseLI	CCNNNNNNNGG	1 cut(s)	976
BseMI	GCAATG	1 cut(s)	721
BseMII	CTCAG	3 cut(s)	262, 1107, 1254
BseNI	ACTGG	2 cut(s)	182, 587
BseRI	GAGGAG	1 cut(s)	590
BseXI	GCAGC	4 cut(s)	173, 1170, 1192, 1198
BseYI	CCCAGC	1 cut(s)	602
BshFI	GGCC	6 cut(s)	131, 172, 203, 587, 962, 1033
BshNI	GGYRCC	1 cut(s)	1252
BshVI	ATCGAT	1 cut(s)	189
BsiHKCI	CYCGRG	1 cut(s)	761
BslFI	GGGAC	2 cut(s)	584, 1226
BslI	CCNNNNNNNGG	1 cut(s)	976
BsmAI	GTCTC	3 cut(s)	704, 1016, 1225
BsmFI	GGGAC	2 cut(s)	584, 1226
BsnI	GGCC	6 cut(s)	131, 172, 203, 587, 962, 1033
Bso31I	GGTCTC	2 cut(s)	1016, 1225
BsoBI	CYCGRG	1 cut(s)	761
Bsp119I	TTCGAA	2 cut(s)	149, 397
Bsp143I	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
Bsp19I	CCATGG	1 cut(s)	672
BspACI	CCGC	8 cut(s)	34, 42, 45, 57, 128, 279, 750, 948
BspANI	GGCC	6 cut(s)	131, 172, 203, 587, 962, 1033
BspCNI	CTCAG	3 cut(s)	261, 1108, 1255
BspDI	ATCGAT	1 cut(s)	189
BspLI	GGNNCC	2 cut(s)	32, 1254
BspMAI	CTGCAG	1 cut(s)	1188
BspPI	GGATC	3 cut(s)	20, 200, 291
BspT104I	TTCGAA	2 cut(s)	149, 397
BspT107I	GGYRCC	1 cut(s)	1252
BspTNI	GGTCTC	2 cut(s)	1016, 1225
BsrDI	GCAATG	1 cut(s)	721
BsrI	ACTGG	2 cut(s)	182, 587
BssECI	CCNNGG	4 cut(s)	132, 672, 708, 963
BssMI	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
BssNI	GRCGYC	1 cut(s)	1253
BssT1I	CCWWGG	3 cut(s)	672, 708, 963
Bst2UI	CCWGG	2 cut(s)	134, 237
Bst4CI	ACNGT	2 cut(s)	145, 698
BstACI	GRCGYC	1 cut(s)	1253
BstBI	TTCGAA	2 cut(s)	149, 397
BstDEI	CTNAG	3 cut(s)	248, 1116, 1263
BstDSI	CCRYGG	1 cut(s)	672
BstEII	GGTNACC	1 cut(s)	745
BstF5I	GGATG	4 cut(s)	985, 1117, 1254, 1309
BstH2I	RGCGCY	2 cut(s)	295, 1256
BstHHI	GCGC	4 cut(s)	294, 433, 596, 1255
BstKTI	GATC	8 cut(s)	15, 28, 120, 193, 208, 213, 286, 394
BstMAI	GTCTC	3 cut(s)	704, 1016, 1225
BstMBI	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
BstMWI	GCNNNNNNNGC	5 cut(s)	134, 593, 880, 1186, 1259
BstNI	CCWGG	2 cut(s)	134, 237
BstNSI	RCATGY	2 cut(s)	845, 891
BstPI	GGTNACC	1 cut(s)	745
BstSCI	CCNGG	2 cut(s)	132, 235
BstSFI	CTRYAG	1 cut(s)	1184
BstV1I	GCAGC	4 cut(s)	173, 1170, 1192, 1198
BstV2I	GAAGAC	1 cut(s)	1149
BstX2I	RGATCY	1 cut(s)	391
BstYI	RGATCY	1 cut(s)	391
Bsu15I	ATCGAT	1 cut(s)	189
BsuRI	GGCC	6 cut(s)	131, 172, 203, 587, 962, 1033
BsuTUI	ATCGAT	1 cut(s)	189
BtgI	CCRYGG	1 cut(s)	672
BtsCI	GGATG	4 cut(s)	985, 1117, 1254, 1309
CfoI	GCGC	4 cut(s)	294, 433, 596, 1255
Cfr13I	GGNCC	5 cut(s)	130, 512, 585, 967, 1032
ClaI	ATCGAT	1 cut(s)	189
Csp6I	GTAC	3 cut(s)	418, 789, 814
CviAII	CATG	6 cut(s)	541, 628, 673, 842, 888, 1029
CviQI	GTAC	3 cut(s)	418, 789, 814
DdeI	CTNAG	3 cut(s)	248, 1116, 1263
DinI	GGCGCC	1 cut(s)	1254
DpnI	GATC	8 cut(s)	14, 27, 119, 192, 207, 212, 285, 393
DpnII	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
DrdI	GACNNNNNNGTC	1 cut(s)	89
DseDI	GACNNNNNNGTC	1 cut(s)	89
EciI	GGCGGA	1 cut(s)	46
Eco130I	CCWWGG	3 cut(s)	672, 708, 963
Eco31I	GGTCTC	2 cut(s)	1016, 1225
Eco32I	GATATC	1 cut(s)	953
Eco47I	GGWCC	2 cut(s)	512, 967
Eco47III	AGCGCT	1 cut(s)	293
Eco57I	CTGAAG	1 cut(s)	977
Eco88I	CYCGRG	1 cut(s)	761
Eco91I	GGTNACC	1 cut(s)	745
EcoO65I	GGTNACC	1 cut(s)	745
EcoRII	CCWGG	2 cut(s)	132, 235
EcoRV	GATATC	1 cut(s)	953
EcoT14I	CCWWGG	3 cut(s)	672, 708, 963
EcoT22I	ATGCAT	1 cut(s)	723
EgeI	GGCGCC	1 cut(s)	1254
EheI	GGCGCC	1 cut(s)	1254
ErhI	CCWWGG	3 cut(s)	672, 708, 963
FaeI	CATG	6 cut(s)	544, 631, 676, 845, 891, 1032
FaqI	GGGAC	2 cut(s)	584, 1226
FatI	CATG	6 cut(s)	540, 627, 672, 841, 887, 1028
FauI	CCCGC	1 cut(s)	272
Fnu4HI	GCNGC	6 cut(s)	45, 129, 162, 1181, 1184, 1187
FokI	GGATG	4 cut(s)	992, 1124, 1261, 1316
Fsp4HI	GCNGC	6 cut(s)	45, 129, 162, 1181, 1184, 1187
FspBI	CTAG	7 cut(s)	125, 428, 462, 624, 929, 1170, 1280
GlaI	GCGC	4 cut(s)	293, 432, 595, 1254
GluI	GCNGC	6 cut(s)	45, 129, 162, 1181, 1184, 1187
GsaI	CCCAGC	1 cut(s)	606
HaeII	RGCGCY	2 cut(s)	295, 1256
HaeIII	GGCC	6 cut(s)	131, 172, 203, 587, 962, 1033
HhaI	GCGC	4 cut(s)	294, 433, 596, 1255
Hin1I	GRCGYC	1 cut(s)	1253
Hin1II	CATG	6 cut(s)	544, 631, 676, 845, 891, 1032
Hin6I	GCGC	4 cut(s)	292, 431, 594, 1253
HinP1I	GCGC	4 cut(s)	292, 431, 594, 1253
HindIII	AAGCTT	1 cut(s)	656
HinfI	GANTC	4 cut(s)	310, 757, 764, 1267
HphI	GGTGA	1 cut(s)	419
Hpy166II	GTNNAC	1 cut(s)	847
Hpy188III	TCNNGA	6 cut(s)	194, 501, 761, 929, 1067, 1280
Hpy8I	GTNNAC	1 cut(s)	847
Hpy99I	CGWCG	5 cut(s)	92, 95, 200, 572, 1352
HpyAV	CCTTC	6 cut(s)	118, 122, 183, 332, 952, 1245
HpyCH4III	ACNGT	2 cut(s)	145, 698
HpyCH4IV	ACGT	4 cut(s)	87, 241, 336, 438
HpyCH4V	TGCA	6 cut(s)	259, 365, 494, 721, 883, 1186
HpyF10VI	GCNNNNNNNGC	5 cut(s)	134, 593, 880, 1186, 1259
HpyF3I	CTNAG	3 cut(s)	248, 1116, 1263
HpySE526I	ACGT	4 cut(s)	87, 241, 336, 438
Hsp92I	GRCGYC	1 cut(s)	1253
Hsp92II	CATG	6 cut(s)	544, 631, 676, 845, 891, 1032
HspAI	GCGC	4 cut(s)	292, 431, 594, 1253
KasI	GGCGCC	1 cut(s)	1252
Kzo9I	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
LmnI	GCTCC	6 cut(s)	59, 631, 676, 988, 1088, 1207
Lsp1109I	GCAGC	4 cut(s)	173, 1170, 1192, 1198
LweI	GCATC	3 cut(s)	266, 970, 1102
MaeI	CTAG	7 cut(s)	125, 428, 462, 624, 929, 1170, 1280
MaeII	ACGT	4 cut(s)	87, 241, 336, 438
MaeIII	GTNAC	3 cut(s)	543, 692, 745
MalI	GATC	8 cut(s)	14, 27, 119, 192, 207, 212, 285, 393
MboI	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
MboII	GAAGA	2 cut(s)	386, 1149
MfeI	CAATTG	4 cut(s)	214, 366, 635, 1078
MflI	RGATCY	1 cut(s)	391
Mly113I	GGCGCC	1 cut(s)	1253
MlyI	GAGTC	1 cut(s)	773
MmeI	TCCRAC	1 cut(s)	537
Mph1103I	ATGCAT	1 cut(s)	723
MseI	TTAA	6 cut(s)	443, 458, 608, 645, 998, 1176
MspA1I	CMGCKG	1 cut(s)	1183
MspR9I	CCNGG	2 cut(s)	134, 237
MunI	CAATTG	4 cut(s)	214, 366, 635, 1078
MvaI	CCWGG	2 cut(s)	134, 237
MwoI	GCNNNNNNNGC	5 cut(s)	134, 593, 880, 1186, 1259
NarI	GGCGCC	1 cut(s)	1253
NcoI	CCATGG	1 cut(s)	672
NdeII	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
NlaIII	CATG	6 cut(s)	544, 631, 676, 845, 891, 1032
NlaIV	GGNNCC	2 cut(s)	32, 1254
NmuCI	GTSAC	1 cut(s)	543
NsiI	ATGCAT	1 cut(s)	723
NspI	RCATGY	2 cut(s)	845, 891
NspV	TTCGAA	2 cut(s)	149, 397
PaeR7I	CTCGAG	1 cut(s)	761
PciI	ACATGT	1 cut(s)	841
PcsI	WCGNNNNNNNCGW	2 cut(s)	195, 201
PfeI	GAWTC	3 cut(s)	310, 757, 1267
PflFI	GACNNNGTC	1 cut(s)	86
PflMI	CCANNNNNTGG	1 cut(s)	976
PkrI	GCNGC	6 cut(s)	46, 130, 163, 1182, 1185, 1188
PleI	GAGTC	1 cut(s)	772
PluTI	GGCGCC	1 cut(s)	1256
PpsI	GAGTC	1 cut(s)	772
PscI	ACATGT	1 cut(s)	841
Psp1406I	AACGTT	1 cut(s)	438
Psp6I	CCWGG	2 cut(s)	132, 235
PspEI	GGTNACC	1 cut(s)	745
PspFI	CCCAGC	1 cut(s)	602
PspGI	CCWGG	2 cut(s)	132, 235
PspN4I	GGNNCC	2 cut(s)	32, 1254
PspPI	GGNCC	5 cut(s)	130, 512, 585, 967, 1032
PsrI	GAACNNNNNNTAC	2 cut(s)	899, 931
PstI	CTGCAG	1 cut(s)	1188
PsuI	RGATCY	1 cut(s)	391
PsyI	GACNNNGTC	1 cut(s)	86
PvuII	CAGCTG	1 cut(s)	1183
RsaI	GTAC	3 cut(s)	419, 790, 815
RsaNI	GTAC	3 cut(s)	418, 789, 814
SaqAI	TTAA	6 cut(s)	443, 458, 608, 645, 998, 1176
SatI	GCNGC	6 cut(s)	45, 129, 162, 1181, 1184, 1187
Sau3AI	GATC	8 cut(s)	12, 25, 117, 190, 205, 210, 283, 391
Sau96I	GGNCC	5 cut(s)	130, 512, 585, 967, 1032
SchI	GAGTC	1 cut(s)	773
ScrFI	CCNGG	2 cut(s)	134, 237
SfaNI	GCATC	3 cut(s)	266, 970, 1102
SfcI	CTRYAG	1 cut(s)	1184
SfoI	GGCGCC	1 cut(s)	1254
Sfr274I	CTCGAG	1 cut(s)	761
SfuI	TTCGAA	2 cut(s)	149, 397
SinI	GGWCC	2 cut(s)	512, 967
SlaI	CTCGAG	1 cut(s)	761
SmlI	CTYRAG	1 cut(s)	761
SmoI	CTYRAG	1 cut(s)	761
SpeI	ACTAGT	1 cut(s)	461
SsiI	CCGC	8 cut(s)	34, 42, 45, 57, 128, 279, 750, 948
SspDI	GGCGCC	1 cut(s)	1252
SspI	AATATT	2 cut(s)	1043, 1223
SspMI	CTAG	7 cut(s)	125, 428, 462, 624, 929, 1170, 1280
StyD4I	CCNGG	2 cut(s)	132, 235
StyI	CCWWGG	3 cut(s)	672, 708, 963
TaaI	ACNGT	2 cut(s)	145, 698
TaiI	ACGT	4 cut(s)	90, 244, 339, 441
TaqI	TCGA	9 cut(s)	149, 189, 195, 231, 313, 325, 397, 567, 762
TatI	WGTACW	1 cut(s)	813
TauI	GCSGC	2 cut(s)	47, 131
TfiI	GAWTC	3 cut(s)	310, 757, 1267
Tru1I	TTAA	6 cut(s)	443, 458, 608, 645, 998, 1176
Tru9I	TTAA	6 cut(s)	443, 458, 608, 645, 998, 1176
TseFI	GTSAC	1 cut(s)	543
TseI	GCWGC	4 cut(s)	161, 1180, 1183, 1186
Tsp45I	GTSAC	1 cut(s)	543
TspDTI	ATGAA	3 cut(s)	17, 749, 1227
TspGWI	ACGGA	2 cut(s)	25, 566
Tth111I	GACNNNGTC	1 cut(s)	86
Van91I	CCANNNNNTGG	1 cut(s)	976
VpaK11BI	GGWCC	2 cut(s)	512, 967
XapI	RAATTY	5 cut(s)	400, 469, 561, 684, 736
XbaI	TCTAGA	2 cut(s)	928, 1279
XceI	RCATGY	2 cut(s)	845, 891
XhoI	CTCGAG	1 cut(s)	761
XspI	CTAG	7 cut(s)	125, 428, 462, 624, 929, 1170, 1280
Zsp2I	ATGCAT	1 cut(s)	723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.