Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0013351

Physical Location & Seq

Genomic Coordinates Forward (+)

14691193 .. 14693070

Gene Structure 1878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0108600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGCTTGATATTTGGTCATGGATTTGCGAGCTACCCAACTTGTCCCAATGGACCGAGTCGGACTCCTCACTCGTTTTCGAGCTCGCTAGCTCGGGACCGAGTCACGGCGACTCCTCAACTCGGTCCATCCAACTCAGGGCTGAGAGAAGTTCAGGCTCCAACATTGGCACTCTCGTCACCTTCTCGGTTTGCTTGCATGGCTTTCAGAACCTGTCCAAGAAAACCCTCTGGGTTTCTGACACGTGTTCTTTGTCTTCAGACAAGCCGTTCCTCCCTCTGTTACTCCAGCTTCTCCAGGAGACCATATCCCGTTCGCCGACGGCGCACGATAGTACATGCCCGCGTTCACAGCTAAAAGCCCTCAAACCCGACCCGGTTTCGTGGGTCATGGACTCCCACTCTCCCGAGTCTTTCTCCACCTTCTTCGACCTGGTTTTCATTACGCGCCTCTTCTGGCTCTGCGCTTGTGACGCGCCGAGTGAAGTCGGTTCTCTCTACTTCAAGTCCTTGCTGGCTCCCAACCTTGAAGGTTTGATGTCCAAGCACGCGCCGGCTCTTCGAACGTTCTTGATCACAGTCGGAGTGGACGCGGAGCTGTGCTTCATGCGCACCCTCGGCTACATGTTAGCAAAATGGTGCATGTTAAGGCAGGTGGGCGTAGGTTTACAGACGCTAACAGCTTTGACGGCGCCGTCTCAGCAGAATCTAGGATTCTCTTACGCGAACGAGGCTTGCGGGTTTTGGGTGCTGAAGGGCTACGCGCCGGTGCTTGGGATGAGAACCACGCGCTCAGTCAACGTTCAGACGACTCAGTTTCCGATTATGGAAACAACCAAGGACTCGGTGCTGAAGTACGCACTGGCTCACCAGCAGCTCGAGGCAGTTCTTCAGGTGGAATATTCAGTTGGATTCTACGACGGGTATATTCAGGTGACTGCACGTGTCGACAACCTGCGCTTCCACGTGGCGAGTCTTGGATTCAACAAAAACCATGACGTGGACTACGCCGAGGAGAGGTATTTCCCGTCGAGAATCCGGGTTTGGGTTGGTCCTGAAGTTGGGGCGAACTACGTGCATGGGTTGAGTTTGGGTCGATCTACAGATAACGGGGAGAAAGAAGTGAAAATGCAAAAGATTATGAAGAGTAGTTTCGGCAAGTCAAGGAATTCAAGAGTGAAAGCTACGATGAGAATGTCGACGAGGACGAGGAAGAAGAACTGGAGGTGGGATCAGGATGCGGAGGGAAATGCTGCTGTGTTTGATGCAGTGTTATGTGATAACGTGACGGGTCATGAAGTGGCCACGAGCAATCCGTCTATTGGTGGCAGAAGCGAGAACAATAACGGTTTACGGAGACGATATGAAGGTGCGAATAGGGCGTTTACGAAAACGGGGAGTTTGGTGTTGGGTGGAGATGAGTATGGGGATGGAGTTGGATGGAGATTGAGTAGGGAGATGGAAGGGAGTGTGTTGAAGTGGAGAATAGGAGGGAAGGTTTGGTTGAGTTATTGGCCTAATGAGGTCGATACTAGTTATTGTGAGACAAGGTGTGTGGAGTGGTGTGATGAGGTTGATTTGCCTTTGATTCTTGGAAAAATCAGCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009536 GO:0009636 GO:0009657 GO:0009987 GO:0015035 GO:0015036 GO:0016043 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0016999 GO:0017001 GO:0017144 GO:0019725 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0045454 GO:0047134 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071840 GO:0072593 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko04621 ko05418 map04621 map05418

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

535

Amino Acids

59.79

Weight (kDa)

7.52

Isoelectric Point (pI)

44.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03520
fragaria_vesca	FvH4_2g14900
malus_domestica	MD05G1011900.v1.1 MD10G1011900.v1.1
prunus_persica	Prupe.8G016900_v2.0.a1
pyrus_communis	pycom05g00690 pycom10g00750
rosa_chinensis	RchiOBHm_Chr6g0277471
rosa_laevigata	RLG00000013298
rosa_multiflora	Rmu_sc0003910.1_g000011 Rmu_sc0017670.1_g000001
rosa_roxburghii	Rroxscaffold_7G00191280
rosa_rugosa	Rorug06G0108600
rosa_samantha	Rh6AG219400 Rh6BG223300 Rh6CG225800 Rh6DG216100
rosa_wichuraiana	Rw6G019210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	640
AasI	GACNNNNNNGTC	1 cut(s)	691
Acc16I	TGCGCA	1 cut(s)	608
Acc36I	ACCTGC	2 cut(s)	640, 960
AccB1I	GGYRCC	1 cut(s)	688
AccB7I	CCANNNNNTGG	1 cut(s)	997
AccI	GTMKAC	2 cut(s)	945, 1196
AccII	CGCG	8 cut(s)	343, 445, 473, 548, 590, 722, 761, 787
AciI	CCGC	4 cut(s)	341, 590, 735, 1238
AclI	AACGTT	2 cut(s)	563, 798
AclWI	GGATC	1 cut(s)	1236
AcoI	YGGCCR	1 cut(s)	1299
AcsI	RAATTY	1 cut(s)	1165
AcuI	CTGAAG	5 cut(s)	240, 770, 869, 872, 1074
AcvI	CACGTG	3 cut(s)	243, 941, 964
AcyI	GRCGYC	1 cut(s)	689
AfaI	GTAC	2 cut(s)	334, 854
AfiI	CCNNNNNNNGG	9 cut(s)	104, 120, 136, 770, 997, 1014, 1042, 1058, 1319
AflIII	ACRYGT	4 cut(s)	240, 242, 621, 940
AgsI	TTSAA	5 cut(s)	502, 527, 982, 1170, 1474
AhlI	ACTAGT	1 cut(s)	1529
AjiI	CACGTC	1 cut(s)	997
AjnI	CCWGG	2 cut(s)	294, 429
AjuI	GAANNNNNNNTTGG	4 cut(s)	888, 920, 1024, 1056
AluBI	AGCT	9 cut(s)	31, 82, 90, 289, 352, 595, 680, 874, 1181
AluI	AGCT	9 cut(s)	31, 82, 90, 289, 352, 595, 680, 874, 1181
Alw21I	GWGCWC	1 cut(s)	84
Alw26I	GTCTC	4 cut(s)	293, 699, 1348, 1535
AlwI	GGATC	1 cut(s)	1236
AlwNI	CAGNNNCTG	1 cut(s)	211
Ama87I	CYCGRG	3 cut(s)	91, 404, 875
AoxI	GGCC	2 cut(s)	1299, 1511
ApeKI	GCWGC	2 cut(s)	871, 1250
ApoI	RAATTY	1 cut(s)	1165
AspS9I	GGNCC	4 cut(s)	51, 95, 123, 1049
AsuC2I	CCSGG	2 cut(s)	374, 1037
AsuHPI	GGTGA	3 cut(s)	169, 857, 943
AsuII	TTCGAA	1 cut(s)	559
AsuNHI	GCTAGC	1 cut(s)	86
AvaI	CYCGRG	3 cut(s)	91, 404, 875
AvaII	GGWCC	4 cut(s)	51, 95, 123, 1049
BalI	TGGCCA	1 cut(s)	1301
BanI	GGYRCC	1 cut(s)	688
BanII	GRGCYC	1 cut(s)	84
BauI	CACGAG	1 cut(s)	1303
BbrPI	CACGTG	3 cut(s)	243, 941, 964
BbsI	GAAGAC	1 cut(s)	246
Bbv12I	GWGCWC	1 cut(s)	84
BbvI	GCAGC	2 cut(s)	883, 1237
BccI	CCATC	4 cut(s)	134, 1421, 1431, 1450
BceAI	ACGGC	5 cut(s)	121, 250, 336, 676, 702
BcgI	CGANNNNNNTGC	2 cut(s)	1054, 1088
BciT130I	CCWGG	2 cut(s)	296, 431
BclI	TGATCA	1 cut(s)	570
BcnI	CCSGG	2 cut(s)	374, 1037
BcoDI	GTCTC	4 cut(s)	293, 699, 1348, 1535
BcuI	ACTAGT	1 cut(s)	1529
BfaI	CTAG	3 cut(s)	87, 707, 1530
BfmI	CTRYAG	1 cut(s)	1098
BfoI	RGCGCY	1 cut(s)	692
BfuAI	ACCTGC	2 cut(s)	640, 960
BisI	GCNGC	2 cut(s)	872, 1251
BlsI	GCNGC	2 cut(s)	873, 1252
Bme1390I	CCNGG	4 cut(s)	296, 374, 431, 1037
Bme18I	GGWCC	4 cut(s)	51, 95, 123, 1049
BmeT110I	CYCGRG	3 cut(s)	91, 404, 875
BmgBI	CACGTC	1 cut(s)	997
BmgT120I	GGNCC	4 cut(s)	51, 95, 123, 1049
BmiI	GGNNCC	4 cut(s)	96, 157, 516, 690
BmrFI	CCNGG	4 cut(s)	296, 374, 431, 1037
BmsI	GCATC	2 cut(s)	1225, 1252
BmtI	GCTAGC	1 cut(s)	90
BpiI	GAAGAC	1 cut(s)	246
BplI	GAGNNNNNCTC	4 cut(s)	47, 79, 398, 430
BpmI	CTGGAG	3 cut(s)	269, 278, 1240
Bpu14I	TTCGAA	1 cut(s)	559
BpuMI	CCSGG	2 cut(s)	374, 1037
BsaAI	YACGTR	4 cut(s)	243, 941, 964, 1072
BsaHI	GRCGYC	1 cut(s)	689
BsaI	GGTCTC	1 cut(s)	293
BsaJI	CCNNGG	3 cut(s)	613, 834, 1008
BsaXI	ACNNNNNCTCC	6 cut(s)	95, 125, 1432, 1462, 1479, 1509
Bsc4I	CCNNNNNNNGG	9 cut(s)	104, 120, 136, 770, 997, 1014, 1042, 1058, 1319
Bse118I	RCCGGY	2 cut(s)	550, 763
Bse1I	ACTGG	2 cut(s)	864, 1223
BseBI	CCWGG	2 cut(s)	296, 431
BseDI	CCNNGG	3 cut(s)	613, 834, 1008
BseGI	GGATG	5 cut(s)	126, 780, 1240, 1432, 1442
BseLI	CCNNNNNNNGG	9 cut(s)	104, 120, 136, 770, 997, 1014, 1042, 1058, 1319
BseMII	CTCAG	5 cut(s)	132, 148, 710, 804, 824
BseNI	ACTGG	2 cut(s)	864, 1223
BseRI	GAGGAG	3 cut(s)	55, 103, 1025
BseXI	GCAGC	2 cut(s)	883, 1237
BsgI	GTGCAG	1 cut(s)	921
Bsh1236I	CGCG	8 cut(s)	343, 445, 473, 548, 590, 722, 761, 787
BshFI	GGCC	2 cut(s)	1301, 1513
BshNI	GGYRCC	1 cut(s)	688
BsiHKAI	GWGCWC	1 cut(s)	84
BsiHKCI	CYCGRG	3 cut(s)	91, 404, 875
BsiSI	CCGG	4 cut(s)	374, 551, 764, 1036
BslFI	GGGAC	2 cut(s)	28, 108
BslI	CCNNNNNNNGG	9 cut(s)	104, 120, 136, 770, 997, 1014, 1042, 1058, 1319
BsmAI	GTCTC	4 cut(s)	293, 699, 1348, 1535
BsmBI	CGTCTC	2 cut(s)	699, 1348
BsmFI	GGGAC	2 cut(s)	28, 108
BsnI	GGCC	2 cut(s)	1301, 1513
Bso31I	GGTCTC	1 cut(s)	293
BsoBI	CYCGRG	3 cut(s)	91, 404, 875
Bsp119I	TTCGAA	1 cut(s)	559
Bsp1286I	GDGCHC	1 cut(s)	84
Bsp143I	GATC	3 cut(s)	570, 1094, 1228
BspACI	CCGC	4 cut(s)	341, 590, 735, 1238
BspANI	GGCC	2 cut(s)	1301, 1513
BspCNI	CTCAG	5 cut(s)	133, 147, 709, 803, 823
BspFNI	CGCG	8 cut(s)	343, 445, 473, 548, 590, 722, 761, 787
BspHI	TCATGA	1 cut(s)	1291
BspLI	GGNNCC	4 cut(s)	96, 157, 516, 690
BspMI	ACCTGC	2 cut(s)	640, 960
BspOI	GCTAGC	1 cut(s)	90
BspPI	GGATC	1 cut(s)	1236
BspQI	GCTCTTC	1 cut(s)	561
BspT104I	TTCGAA	1 cut(s)	559
BspT107I	GGYRCC	1 cut(s)	688
BspTNI	GGTCTC	1 cut(s)	293
BsrFI	RCCGGY	2 cut(s)	550, 763
BsrI	ACTGG	2 cut(s)	864, 1223
BssAI	RCCGGY	2 cut(s)	550, 763
BssECI	CCNNGG	3 cut(s)	613, 834, 1008
BssMI	GATC	3 cut(s)	570, 1094, 1228
BssNI	GRCGYC	1 cut(s)	689
BssSI	CACGAG	1 cut(s)	1303
BssT1I	CCWWGG	1 cut(s)	834
Bst2BI	CACGAG	1 cut(s)	1303
Bst2UI	CCWGG	2 cut(s)	296, 431
Bst4CI	ACNGT	2 cut(s)	577, 1346
Bst6I	CTCTTC	3 cut(s)	455, 561, 1136
BstACI	GRCGYC	1 cut(s)	689
BstBAI	YACGTR	4 cut(s)	243, 941, 964, 1072
BstBI	TTCGAA	1 cut(s)	559
BstC8I	GCNNGC	9 cut(s)	29, 84, 88, 194, 341, 513, 546, 552, 733
BstDEI	CTNAG	5 cut(s)	134, 141, 696, 790, 810
BstF5I	GGATG	5 cut(s)	126, 780, 1240, 1432, 1442
BstFNI	CGCG	8 cut(s)	343, 445, 473, 548, 590, 722, 761, 787
BstH2I	RGCGCY	1 cut(s)	692
BstKTI	GATC	3 cut(s)	573, 1097, 1231
BstMAI	GTCTC	4 cut(s)	293, 699, 1348, 1535
BstMBI	GATC	3 cut(s)	570, 1094, 1228
BstNI	CCWGG	2 cut(s)	296, 431
BstNSI	RCATGY	3 cut(s)	339, 625, 643
BstSCI	CCNGG	4 cut(s)	294, 372, 429, 1035
BstSFI	CTRYAG	1 cut(s)	1098
BstUI	CGCG	8 cut(s)	343, 445, 473, 548, 590, 722, 761, 787
BstV1I	GCAGC	2 cut(s)	883, 1237
BstV2I	GAAGAC	1 cut(s)	246
BsuRI	GGCC	2 cut(s)	1301, 1513
BtrI	CACGTC	1 cut(s)	997
BtsCI	GGATG	5 cut(s)	126, 780, 1240, 1432, 1442
BtsI	GCAGTG	1 cut(s)	1272
BtsIMutI	CAGTG	2 cut(s)	857, 1272
BveI	ACCTGC	2 cut(s)	640, 960
Cac8I	GCNNGC	9 cut(s)	29, 84, 88, 194, 341, 513, 546, 552, 733
CaiI	CAGNNNCTG	1 cut(s)	211
CciI	TCATGA	1 cut(s)	1291
Cfr10I	RCCGGY	2 cut(s)	550, 763
Cfr13I	GGNCC	4 cut(s)	51, 95, 123, 1049
CseI	GACGC	3 cut(s)	479, 596, 679
CsiI	ACCWGGT	1 cut(s)	429
Csp6I	GTAC	2 cut(s)	333, 853
CspCI	CAANNNNNGTGG	2 cut(s)	1533, 1568
CviQI	GTAC	2 cut(s)	333, 853
DdeI	CTNAG	5 cut(s)	134, 141, 696, 790, 810
DinI	GGCGCC	1 cut(s)	690
DpnI	GATC	3 cut(s)	572, 1096, 1230
DpnII	GATC	3 cut(s)	570, 1094, 1228
DrdI	GACNNNNNNGTC	1 cut(s)	691
DseDI	GACNNNNNNGTC	1 cut(s)	691
EaeI	YGGCCR	1 cut(s)	1299
Eam1104I	CTCTTC	3 cut(s)	455, 561, 1136
EarI	CTCTTC	3 cut(s)	455, 561, 1136
Ecl136II	GAGCTC	1 cut(s)	82
Eco130I	CCWWGG	1 cut(s)	834
Eco24I	GRGCYC	1 cut(s)	84
Eco31I	GGTCTC	1 cut(s)	293
Eco47I	GGWCC	4 cut(s)	51, 95, 123, 1049
Eco53kI	GAGCTC	1 cut(s)	82
Eco57I	CTGAAG	5 cut(s)	240, 770, 869, 872, 1074
Eco72I	CACGTG	3 cut(s)	243, 941, 964
Eco88I	CYCGRG	3 cut(s)	91, 404, 875
EcoICRI	GAGCTC	1 cut(s)	82
EcoRI	GAATTC	1 cut(s)	1165
EcoRII	CCWGG	2 cut(s)	294, 429
EcoT14I	CCWWGG	1 cut(s)	834
EcoT38I	GRGCYC	1 cut(s)	84
EgeI	GGCGCC	1 cut(s)	690
EheI	GGCGCC	1 cut(s)	690
ErhI	CCWWGG	1 cut(s)	834
Esp3I	CGTCTC	2 cut(s)	699, 1348
FaqI	GGGAC	2 cut(s)	28, 108
FauI	CCCGC	2 cut(s)	348, 728
FauNDI	CATATG	1 cut(s)	1604
FbaI	TGATCA	1 cut(s)	570
FblI	GTMKAC	2 cut(s)	945, 1196
Fnu4HI	GCNGC	2 cut(s)	872, 1251
FokI	GGATG	5 cut(s)	113, 787, 1247, 1439, 1449
FriOI	GRGCYC	1 cut(s)	84
Fsp4HI	GCNGC	2 cut(s)	872, 1251
FspAI	RTGCGCAY	1 cut(s)	608
FspBI	CTAG	3 cut(s)	87, 707, 1530
FspI	TGCGCA	1 cut(s)	608
GluI	GCNGC	2 cut(s)	872, 1251
GsuI	CTGGAG	3 cut(s)	269, 278, 1240
HaeII	RGCGCY	1 cut(s)	692
HaeIII	GGCC	2 cut(s)	1301, 1513
HapII	CCGG	4 cut(s)	374, 551, 764, 1036
HgaI	GACGC	3 cut(s)	479, 596, 679
Hin1I	GRCGYC	1 cut(s)	689
HincII	GTYRAC	3 cut(s)	796, 946, 1197
HindII	GTYRAC	3 cut(s)	796, 946, 1197
HpaII	CCGG	4 cut(s)	374, 551, 764, 1036
HphI	GGTGA	3 cut(s)	169, 857, 943
Hpy166II	GTNNAC	9 cut(s)	347, 586, 665, 796, 946, 1000, 1197, 1349, 1383
Hpy188I	TCNGA	7 cut(s)	61, 207, 238, 259, 581, 804, 819
Hpy188III	TCNNGA	8 cut(s)	93, 404, 568, 1029, 1052, 1170, 1232, 1292
Hpy8I	GTNNAC	9 cut(s)	347, 586, 665, 796, 946, 1000, 1197, 1349, 1383
Hpy99I	CGWCG	4 cut(s)	322, 920, 1030, 1201
HpyAV	CCTTC	7 cut(s)	190, 430, 521, 745, 1358, 1454, 1486
HpyCH4III	ACNGT	2 cut(s)	577, 1346
HpyCH4IV	ACGT	8 cut(s)	242, 563, 798, 940, 963, 996, 1071, 1281
HpyCH4V	TGCA	6 cut(s)	196, 639, 938, 1075, 1129, 1265
HpyF3I	CTNAG	5 cut(s)	134, 141, 696, 790, 810
HpySE526I	ACGT	8 cut(s)	242, 563, 798, 940, 963, 996, 1071, 1281
Hsp92I	GRCGYC	1 cut(s)	689
KasI	GGCGCC	1 cut(s)	688
KroI	GCCGGC	1 cut(s)	550
KroNI	GCCGGC	1 cut(s)	552
Ksp22I	TGATCA	1 cut(s)	570
Kzo9I	GATC	3 cut(s)	570, 1094, 1228
LguI	GCTCTTC	1 cut(s)	561
LmnI	GCTCC	3 cut(s)	161, 520, 592
Lsp1109I	GCAGC	2 cut(s)	883, 1237
LweI	GCATC	2 cut(s)	1225, 1252
MabI	ACCWGGT	1 cut(s)	429
MaeI	CTAG	3 cut(s)	87, 707, 1530
MaeII	ACGT	8 cut(s)	242, 563, 798, 940, 963, 996, 1071, 1281
MaeIII	GTNAC	6 cut(s)	101, 175, 279, 467, 931, 1282
MalI	GATC	3 cut(s)	572, 1096, 1230
MboI	GATC	3 cut(s)	570, 1094, 1228
MboII	GAAGA	8 cut(s)	246, 415, 442, 548, 878, 1153, 1222, 1225
MhlI	GDGCHC	1 cut(s)	84
MlsI	TGGCCA	1 cut(s)	1301
MluCI	AATT	1 cut(s)	1165
MluNI	TGGCCA	1 cut(s)	1301
Mly113I	GGCGCC	1 cut(s)	689
MlyI	GAGTC	9 cut(s)	56, 65, 104, 109, 386, 416, 802, 833, 979
MmeI	TCCRAC	6 cut(s)	39, 154, 183, 559, 886, 1414
Mox20I	TGGCCA	1 cut(s)	1301
MroNI	GCCGGC	1 cut(s)	550
MscI	TGGCCA	1 cut(s)	1301
MseI	TTAA	1 cut(s)	644
Msp20I	TGGCCA	1 cut(s)	1301
MspI	CCGG	4 cut(s)	374, 551, 764, 1036
MspR9I	CCNGG	4 cut(s)	296, 374, 431, 1037
MvaI	CCWGG	2 cut(s)	296, 431
MvnI	CGCG	8 cut(s)	343, 445, 473, 548, 590, 722, 761, 787
NaeI	GCCGGC	1 cut(s)	552
NarI	GGCGCC	1 cut(s)	689
NciI	CCSGG	2 cut(s)	374, 1037
NdeI	CATATG	1 cut(s)	1604
NdeII	GATC	3 cut(s)	570, 1094, 1228
NgoMIV	GCCGGC	1 cut(s)	550
NheI	GCTAGC	1 cut(s)	86
NlaIV	GGNNCC	4 cut(s)	96, 157, 516, 690
NmeAIII	GCCGAG	3 cut(s)	501, 594, 1033
NmuCI	GTSAC	5 cut(s)	101, 175, 467, 931, 1282
NsbI	TGCGCA	1 cut(s)	608
NspI	RCATGY	3 cut(s)	339, 625, 643
NspV	TTCGAA	1 cut(s)	559
PaeR7I	CTCGAG	1 cut(s)	875
PagI	TCATGA	1 cut(s)	1291
PaqCI	CACCTGC	1 cut(s)	640
PciI	ACATGT	1 cut(s)	621
PciSI	GCTCTTC	1 cut(s)	561
PcsI	WCGNNNNNNNCGW	2 cut(s)	1202, 1310
PdiI	GCCGGC	1 cut(s)	552
PfeI	GAWTC	6 cut(s)	703, 711, 909, 978, 1032, 1585
PflFI	GACNNNGTC	2 cut(s)	55, 99
PflMI	CCANNNNNTGG	1 cut(s)	997
PfoI	TCCNGGA	1 cut(s)	294
PkrI	GCNGC	2 cut(s)	873, 1252
PleI	GAGTC	9 cut(s)	56, 64, 104, 108, 386, 415, 802, 833, 978
PluTI	GGCGCC	1 cut(s)	692
PmaCI	CACGTG	3 cut(s)	243, 941, 964
PmlI	CACGTG	3 cut(s)	243, 941, 964
PpsI	GAGTC	9 cut(s)	56, 64, 104, 108, 386, 415, 802, 833, 978
Ppu21I	YACGTR	4 cut(s)	243, 941, 964, 1072
PscI	ACATGT	1 cut(s)	621
Psp124BI	GAGCTC	1 cut(s)	84
Psp1406I	AACGTT	2 cut(s)	563, 798
Psp6I	CCWGG	2 cut(s)	294, 429
PspCI	CACGTG	3 cut(s)	243, 941, 964
PspGI	CCWGG	2 cut(s)	294, 429
PspN4I	GGNNCC	4 cut(s)	96, 157, 516, 690
PspPI	GGNCC	4 cut(s)	51, 95, 123, 1049
PspXI	VCTCGAGB	1 cut(s)	875
PstNI	CAGNNNCTG	1 cut(s)	211
PsyI	GACNNNGTC	2 cut(s)	55, 99
RsaI	GTAC	2 cut(s)	334, 854
RsaNI	GTAC	2 cut(s)	333, 853
SacI	GAGCTC	1 cut(s)	84
SalI	GTCGAC	2 cut(s)	944, 1195
SapI	GCTCTTC	1 cut(s)	561
SaqAI	TTAA	1 cut(s)	644
SatI	GCNGC	2 cut(s)	872, 1251
Sau3AI	GATC	3 cut(s)	570, 1094, 1228
Sau96I	GGNCC	4 cut(s)	51, 95, 123, 1049
SchI	GAGTC	9 cut(s)	56, 65, 104, 109, 386, 416, 802, 833, 979
ScrFI	CCNGG	4 cut(s)	296, 374, 431, 1037
SduI	GDGCHC	1 cut(s)	84
SexAI	ACCWGGT	1 cut(s)	429
SfaNI	GCATC	2 cut(s)	1225, 1252
SfcI	CTRYAG	1 cut(s)	1098
SfoI	GGCGCC	1 cut(s)	690
Sfr274I	CTCGAG	1 cut(s)	875
SfuI	TTCGAA	1 cut(s)	559
SgrAI	CRCCGGYG	1 cut(s)	763
SinI	GGWCC	4 cut(s)	51, 95, 123, 1049
SlaI	CTCGAG	1 cut(s)	875
SmlI	CTYRAG	1 cut(s)	875
SmoI	CTYRAG	1 cut(s)	875
SpeI	ACTAGT	1 cut(s)	1529
Sse9I	AATT	1 cut(s)	1165
SsiI	CCGC	4 cut(s)	341, 590, 735, 1238
SspDI	GGCGCC	1 cut(s)	688
SspI	AATATT	1 cut(s)	899
SspMI	CTAG	3 cut(s)	87, 707, 1530
SstI	GAGCTC	1 cut(s)	84
StyD4I	CCNGG	4 cut(s)	294, 372, 429, 1035
StyI	CCWWGG	1 cut(s)	834
TaaI	ACNGT	2 cut(s)	577, 1346
TaiI	ACGT	8 cut(s)	245, 566, 801, 943, 966, 999, 1074, 1284
TaqI	TCGA	9 cut(s)	78, 426, 559, 876, 945, 1028, 1093, 1196, 1524
TaqII	GACCGA	3 cut(s)	68, 111, 112
TasI	AATT	1 cut(s)	1165
TatI	WGTACW	1 cut(s)	332
TfiI	GAWTC	6 cut(s)	703, 711, 909, 978, 1032, 1585
Tru1I	TTAA	1 cut(s)	644
Tru9I	TTAA	1 cut(s)	644
TscAI	CASTG	2 cut(s)	864, 1272
TseFI	GTSAC	5 cut(s)	101, 175, 467, 931, 1282
TseI	GCWGC	2 cut(s)	871, 1250
Tsp45I	GTSAC	5 cut(s)	101, 175, 467, 931, 1282
TspDTI	ATGAA	5 cut(s)	427, 592, 1154, 1308, 1377
TspGWI	ACGGA	2 cut(s)	1302, 1366
TspRI	CASTG	2 cut(s)	864, 1272
Tth111I	GACNNNGTC	2 cut(s)	55, 99
Van91I	CCANNNNNTGG	1 cut(s)	997
VpaK11BI	GGWCC	4 cut(s)	51, 95, 123, 1049
XapI	RAATTY	1 cut(s)	1165
XceI	RCATGY	3 cut(s)	339, 625, 643
XhoI	CTCGAG	1 cut(s)	875
XmiI	GTMKAC	2 cut(s)	945, 1196
XspI	CTAG	3 cut(s)	87, 707, 1530

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.